-
1
-
-
0029998772
-
Sequencing emm-specific pcr products for routine and accurate typing of group A streptococci
-
Beall B, Facklam R, Thompson T. Sequencing emm-specific pcr products for routine and accurate typing of group A streptococci. J Clin Microbiol 1996; 34: 953-958.
-
(1996)
J Clin Microbiol
, vol.34
, pp. 953-958
-
-
Beall, B.1
Facklam, R.2
Thompson, T.3
-
2
-
-
0035082969
-
Multilocus sequence typing of Streptococcus pyogenes and the relationships between emm type and clone
-
Enright MC, Spratt BG, Kalia A, Cross JH, Bessen DE. Multilocus sequence typing of Streptococcus pyogenes and the relationships between emm type and clone. Infect Immun 2001; 69: 2416-2427.
-
(2001)
Infect Immun
, vol.69
, pp. 2416-2427
-
-
Enright, M.C.1
Spratt, B.G.2
Kalia, A.3
Cross, J.H.4
Bessen, D.E.5
-
3
-
-
29744439183
-
Methicillin-resistant Staphylococcus aureus genotyping using a small set of polymorphisms
-
Stephens AJ, Huygens F, Inman-Bamber J et al. Methicillin-resistant Staphylococcus aureus genotyping using a small set of polymorphisms. J Med Microbiol 2006; 55: 43-51.
-
(2006)
J Med Microbiol
, vol.55
, pp. 43-51
-
-
Stephens, A.J.1
Huygens, F.2
Inman-Bamber, J.3
-
4
-
-
33845547024
-
Staphylococcus aureus genotyping using novel real-time PCR formats
-
Huygens F, Inman-Bamber J, Nimmo GR et al. Staphylococcus aureus genotyping using novel real-time PCR formats. J Clin Microbiol 2006; 44: 3712-3719.
-
(2006)
J Clin Microbiol
, vol.44
, pp. 3712-3719
-
-
Huygens, F.1
Inman-Bamber, J.2
Nimmo, G.R.3
-
5
-
-
33747051228
-
Genotyping of Campylobacter jejuni using seven single-nucleotide polymorphisms in combination with flaa short variable region sequencing
-
Price EP, Thiruvenkataswamy V, Mickan L et al. Genotyping of Campylobacter jejuni using seven single-nucleotide polymorphisms in combination with flaa short variable region sequencing. J Med Microbiol 2006; 55: 1061-1070.
-
(2006)
J Med Microbiol
, vol.55
, pp. 1061-1070
-
-
Price, E.P.1
Thiruvenkataswamy, V.2
Mickan, L.3
-
6
-
-
1542426071
-
Identification and interrogation of highly informative single nucleotide polymorphism sets defined by bacterial multilocus sequence typing databases
-
Robertson GA, Thiruvenkataswamy V, Shilling H et al. Identification and interrogation of highly informative single nucleotide polymorphism sets defined by bacterial multilocus sequence typing databases. J Med Microbiol 2004; 53: 35-45.
-
(2004)
J Med Microbiol
, vol.53
, pp. 35-45
-
-
Robertson, G.A.1
Thiruvenkataswamy, V.2
Shilling, H.3
-
7
-
-
25844500813
-
Real-time single-nucleotide polymorphism profiling using TaqMan technology for rapid recognition of Campylobacter jejuni clonal complexes
-
Best EL, Fox AJ, Frost JA, Bolton FJ. Real-time single-nucleotide polymorphism profiling using TaqMan technology for rapid recognition of Campylobacter jejuni clonal complexes. J Med Microbiol 2005; 54: 919-925.
-
(2005)
J Med Microbiol
, vol.54
, pp. 919-925
-
-
Best, E.L.1
Fox, A.J.2
Frost, J.A.3
Bolton, F.J.4
-
8
-
-
34547490318
-
Specific detection of Campylobacter jejuni from faeces using single nucleotide polymorphisms
-
Best EL, Fox AJ, Owen RJ, Cheesbrough J, Bolton FJ. Specific detection of Campylobacter jejuni from faeces using single nucleotide polymorphisms. Epidemiol Infect 2007; 135: 839-846.
-
(2007)
Epidemiol Infect
, vol.135
, pp. 839-846
-
-
Best, E.L.1
Fox, A.J.2
Owen, R.J.3
Cheesbrough, J.4
Bolton, F.J.5
-
9
-
-
34548503865
-
Computer-aided identification of polymorphism sets diagnostic for groups of bacterial and viral genetic variants
-
Price EP, Inman-Bamber J, Thiruvenkataswamy V, Huygens F, Giffard PM. Computer-aided identification of polymorphism sets diagnostic for groups of bacterial and viral genetic variants. BMC Bioinformatics 2007; 8: 278.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 278
-
-
Price, E.P.1
Inman-Bamber, J.2
Thiruvenkataswamy, V.3
Huygens, F.4
Giffard, P.M.5
-
10
-
-
34249726643
-
High-resolution DNA melt curve analysis of the clustered, regularly interspaced short-palindromic-repeat locus of Campylobacter jejuni
-
Price EP, Smith H, Huygens F, Giffard PM. High-resolution DNA melt curve analysis of the clustered, regularly interspaced short-palindromic-repeat locus of Campylobacter jejuni. Appl Environ Microbiol 2007; 73: 3431-3436.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 3431-3436
-
-
Price, E.P.1
Smith, H.2
Huygens, F.3
Giffard, P.M.4
-
11
-
-
51649098585
-
Assignment of Streptococcus agalactiae isolates to clonal complexes using a small set of single nucleotide polymorphisms
-
Honsa E, Fricke T, Stephens AJ et al. Assignment of Streptococcus agalactiae isolates to clonal complexes using a small set of single nucleotide polymorphisms. BMC Microbiol 2008; 8: 140.
-
(2008)
BMC Microbiol
, vol.8
, pp. 140
-
-
Honsa, E.1
Fricke, T.2
Stephens, A.J.3
-
12
-
-
0034090681
-
High-throughput snp allele-frequency determination in pooled DNA samples by kinetic pcr
-
Germer S, Holland MJ, Higuchi R. High-throughput snp allele-frequency determination in pooled DNA samples by kinetic pcr. Genome Res 2000; 10: 258-266.
-
(2000)
Genome Res
, vol.10
, pp. 258-266
-
-
Germer, S.1
Holland, M.J.2
Higuchi, R.3
-
13
-
-
46949105560
-
High resolution melting applications for clinical laboratory medicine
-
Erali M, Voelkerding KV, Wittwer CT. High resolution melting applications for clinical laboratory medicine. Exp Mol Pathol 2008; 85: 50-58.
-
(2008)
Exp Mol Pathol
, vol.85
, pp. 50-58
-
-
Erali, M.1
Voelkerding, K.V.2
Wittwer, C.T.3
-
14
-
-
66349095408
-
High-resolution DNA melting analysis: advancements and limitations
-
Wittwer CT. High-resolution DNA melting analysis: advancements and limitations. Hum Mutat 2009; 30: 857-859.
-
(2009)
Hum Mutat
, vol.30
, pp. 857-859
-
-
Wittwer, C.T.1
-
15
-
-
39749106626
-
High-resolution melting analysis of the spa repeat region of Staphylococcus aureus
-
Stephens AJ, Inman-Bamber J, Giffard PM, Huygens F. High-resolution melting analysis of the spa repeat region of Staphylococcus aureus. Clin Chem 2008; 54: 432-436.
-
(2008)
Clin Chem
, vol.54
, pp. 432-436
-
-
Stephens, A.J.1
Inman-Bamber, J.2
Giffard, P.M.3
Huygens, F.4
-
16
-
-
0028964826
-
Vir typing: a long-pcr typing method for group A streptococci
-
Gardiner D, Hartas J, Currie B, Mathews JD, Kemp DJ, Sriprakash KS. Vir typing: a long-pcr typing method for group A streptococci. PCR Methods Appl 1995; 4: 288-293.
-
(1995)
PCR Methods Appl
, vol.4
, pp. 288-293
-
-
Gardiner, D.1
Hartas, J.2
Currie, B.3
Mathews, J.D.4
Kemp, D.J.5
Sriprakash, K.S.6
-
17
-
-
1342304133
-
eBurst: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data
-
Feil EJ, Li BC, Aanensen DM, Hanage WP, Spratt BG. eBurst: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing data. J Bacteriol 2004; 186: 1518-1530.
-
(2004)
J Bacteriol
, vol.186
, pp. 1518-1530
-
-
Feil, E.J.1
Li, B.C.2
Aanensen, D.M.3
Hanage, W.P.4
Spratt, B.G.5
-
18
-
-
2942555285
-
Analyses of clonality and the evolution of bacterial pathogens
-
Feil EJ, Enright MC. Analyses of clonality and the evolution of bacterial pathogens. Curr Opin Microbiol 2004; 7: 308-313.
-
(2004)
Curr Opin Microbiol
, vol.7
, pp. 308-313
-
-
Feil, E.J.1
Enright, M.C.2
-
19
-
-
0015164882
-
Simplification of the empirical relationship between melting temperature of DNA, its gc content and concentration of sodium ions in solution
-
Frank-Kamenetskii F. Simplification of the empirical relationship between melting temperature of DNA, its gc content and concentration of sodium ions in solution. Biopolymers 1971; 10: 2623-2624.
-
(1971)
Biopolymers
, vol.10
, pp. 2623-2624
-
-
Frank-Kamenetskii, F.1
-
20
-
-
0030907250
-
Survey of emm gene sequences and t-antigen types from systemic Streptococcus pyogenes infection isolates collected in San Francisco, California; Atlanta, Georgia; and Connecticut in 1994 and 1995
-
Beall B, Facklam R, Hoenes T, Schwartz B. Survey of emm gene sequences and t-antigen types from systemic Streptococcus pyogenes infection isolates collected in San Francisco, California; Atlanta, Georgia; and Connecticut in 1994 and 1995. J Clin Microbiol 1997; 35: 1231-1235.
-
(1997)
J Clin Microbiol
, vol.35
, pp. 1231-1235
-
-
Beall, B.1
Facklam, R.2
Hoenes, T.3
Schwartz, B.4
-
21
-
-
34247243311
-
International quality assurance study for characterization of Streptococcus pyogenes
-
Neal S, Beall B, Ekelund K et al. International quality assurance study for characterization of Streptococcus pyogenes. J Clin Microbiol 2007; 45: 1175-1179.
-
(2007)
J Clin Microbiol
, vol.45
, pp. 1175-1179
-
-
Neal, S.1
Beall, B.2
Ekelund, K.3
-
22
-
-
33646675065
-
Identification of macrolide-resistant clones of Streptococcus pyogenes in Portugal
-
Silva-Costa C, Ramirez M, Melo-Cristino J. Identification of macrolide-resistant clones of Streptococcus pyogenes in Portugal. Clin Microbiol Infect 2006; 12: 513-518.
-
(2006)
Clin Microbiol Infect
, vol.12
, pp. 513-518
-
-
Silva-Costa, C.1
Ramirez, M.2
Melo-Cristino, J.3
-
23
-
-
16844368780
-
Identity and prevalence of multilocus sequence typing-defined clones of group A streptococci within a hospital setting
-
McGregor KF, Spratt BG. Identity and prevalence of multilocus sequence typing-defined clones of group A streptococci within a hospital setting. J Clin Microbiol 2005; 43: 1963-1967.
-
(2005)
J Clin Microbiol
, vol.43
, pp. 1963-1967
-
-
McGregor, K.F.1
Spratt, B.G.2
-
24
-
-
67849090458
-
Molecular genotyping of microbes by multilocus pcr and mass spectrometry: a new tool for hospital infection control and public health surveillance
-
Ecker DJ, Massire C, Blyn LB et al. Molecular genotyping of microbes by multilocus pcr and mass spectrometry: a new tool for hospital infection control and public health surveillance. Methods Mol Biol 2009; 551: 71-87.
-
(2009)
Methods Mol Biol
, vol.551
, pp. 71-87
-
-
Ecker, D.J.1
Massire, C.2
Blyn, L.B.3
-
25
-
-
66749141446
-
Rapid molecular genotyping and clonal complex assignment of staphylococcus aureus isolates by PCR coupled to electrospray ionization-mass spectrometry
-
Hall TA, Sampath R, Blyn LB et al. Rapid molecular genotyping and clonal complex assignment of staphylococcus aureus isolates by PCR coupled to electrospray ionization-mass spectrometry. J Clin Microbiol 2009; 47: 1733-1741.
-
(2009)
J Clin Microbiol
, vol.47
, pp. 1733-1741
-
-
Hall, T.A.1
Sampath, R.2
Blyn, L.B.3
-
26
-
-
42449136222
-
High-resolution genotyping of Campylobacter species by use of pcr and high-throughput mass spectrometry
-
Hannis JC, Manalili SM, Hall TA et al. High-resolution genotyping of Campylobacter species by use of pcr and high-throughput mass spectrometry. J Clin Microbiol 2008; 46: 1220-1225.
-
(2008)
J Clin Microbiol
, vol.46
, pp. 1220-1225
-
-
Hannis, J.C.1
Manalili, S.M.2
Hall, T.A.3
-
27
-
-
34547548626
-
Automated comparative sequence analysis by base-specific cleavage and mass spectrometry for nucleic acid-based microbial typing
-
Honisch C, Chen Y, Mortimer C et al. Automated comparative sequence analysis by base-specific cleavage and mass spectrometry for nucleic acid-based microbial typing. Proc Natl Acad Sci U S A 2007; 104: 10649-10654.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 10649-10654
-
-
Honisch, C.1
Chen, Y.2
Mortimer, C.3
-
28
-
-
10744233551
-
Group A streptococci from a remote community have novel multilocus genotypes but share emm types and housekeeping alleles with isolates from worldwide sources
-
McGregor K, Bilek N, Bennett A et al. Group A streptococci from a remote community have novel multilocus genotypes but share emm types and housekeeping alleles with isolates from worldwide sources. J Infect Dis 2004; 189: 717-723.
-
(2004)
J Infect Dis
, vol.189
, pp. 717-723
-
-
McGregor, K.1
Bilek, N.2
Bennett, A.3
-
29
-
-
3042662429
-
Multilocus sequence typing of Streptococcus pyogenes representing most known emm types and distinctions among subpopulation genetic structures
-
McGregor K, Spratt B, Kalia A et al. Multilocus sequence typing of Streptococcus pyogenes representing most known emm types and distinctions among subpopulation genetic structures. J Bacteriol 2004; 186: 4285-4294.
-
(2004)
J Bacteriol
, vol.186
, pp. 4285-4294
-
-
McGregor, K.1
Spratt, B.2
Kalia, A.3
-
30
-
-
43149123815
-
Relationships between emm and multilocus sequence types within a global collection of Streptococcus pyogenes
-
Bessen D, McGregor K, Whatmore A. Relationships between emm and multilocus sequence types within a global collection of Streptococcus pyogenes. BMC Microbiol 2008; 8: 59.
-
(2008)
BMC Microbiol
, vol.8
, pp. 59
-
-
Bessen, D.1
McGregor, K.2
Whatmore, A.3
|