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Volumn 49, Issue 3, 2003, Pages 396-406

Amplicon melting analysis with labeled primers: A closed-tube method for differentiating homozygotes and heterozygotes

Author keywords

[No Author keywords available]

Indexed keywords

BETA GLOBIN; DNA; FLUORESCENT DYE; HEMOGLOBIN; HETERODUPLEX; OLIGONUCLEOTIDE; PRIMER DNA;

EID: 0037371570     PISSN: 00099147     EISSN: None     Source Type: Journal    
DOI: 10.1373/49.3.396     Document Type: Article
Times cited : (311)

References (34)
  • 1
    • 0032437725 scopus 로고    scopus 로고
    • Detection of base alterations within the region of factor V Leiden by fluorescent melting curves
    • Lyon E, Millson A, Phan T, Wittwer CT. Detection of base alterations within the region of factor V Leiden by fluorescent melting curves. Mol Diagn 1998;3:203-10.
    • (1998) Mol Diagn , vol.3 , pp. 203-210
    • Lyon, E.1    Millson, A.2    Phan, T.3    Wittwer, C.T.4
  • 2
    • 0024595101 scopus 로고
    • Detection of polymorphisms of human DNA by gel electrophoresis as single-strand conformation polymorphisms
    • Orita O, Iwahana H, Danazawa J, Hayashi K, Sekiya T. Detection of polymorphisms of human DNA by gel electrophoresis as single-strand conformation polymorphisms. Proc Natl Acad Sci U S A 1989;86:2766-70.
    • (1989) Proc Natl Acad Sci U S A , vol.86 , pp. 2766-2770
    • Orita, O.1    Iwahana, H.2    Danazawa, J.3    Hayashi, K.4    Sekiya, T.5
  • 3
    • 0033049593 scopus 로고    scopus 로고
    • Single-strand conformation polymorphism and heteroduplex analysis for gel-based mutation detection
    • Nataraj AJ, Olivos-Glander I, Kusukawa N, Highsmith WE. Single-strand conformation polymorphism and heteroduplex analysis for gel-based mutation detection. Electrophoresis 1999;20:1177-85.
    • (1999) Electrophoresis , vol.20 , pp. 1177-1185
    • Nataraj, A.J.1    Olivos-Glander, I.2    Kusukawa, N.3    Highsmith, W.E.4
  • 4
    • 0025167972 scopus 로고
    • Comprehensive detection of single base changes in human genomic DNA using denaturing gradient gel electrophoresis and a GC clamp
    • Abrams ES, Murdaugh SE, Lerman LS. Comprehensive detection of single base changes in human genomic DNA using denaturing gradient gel electrophoresis and a GC clamp. Genomics 1990;7:463-75.
    • (1990) Genomics , vol.7 , pp. 463-475
    • Abrams, E.S.1    Murdaugh, S.E.2    Lerman, L.S.3
  • 5
    • 0032496246 scopus 로고    scopus 로고
    • Detecting single base substitutions, mismatches and bulges in DNA by temperature gradient gel electrophoresis and related methods
    • Wartell RM, Hosseini S, Powell S, Zhu J. Detecting single base substitutions, mismatches and bulges in DNA by temperature gradient gel electrophoresis and related methods. J Chromatogr A 1998;806:169-85.
    • (1998) J Chromatogr A , vol.806 , pp. 169-185
    • Wartell, R.M.1    Hosseini, S.2    Powell, S.3    Zhu, J.4
  • 6
    • 0032970025 scopus 로고    scopus 로고
    • Enzymatic methods for mutation scanning
    • Taylor GR, Deeble J. Enzymatic methods for mutation scanning. Genet Anal 1999;14:181-6.
    • (1999) Genet Anal , vol.14 , pp. 181-186
    • Taylor, G.R.1    Deeble, J.2
  • 7
    • 0034999807 scopus 로고    scopus 로고
    • Denaturing high-performance liquid chromatography: A review
    • Xiao W, Oefner PJ. Denaturing high-performance liquid chromatography: a review. Hum Mutat 2001;17:439-74.
    • (2001) Hum Mutat , vol.17 , pp. 439-474
    • Xiao, W.1    Oefner, P.J.2
  • 8
    • 0031022694 scopus 로고    scopus 로고
    • Continuous fluorescence monitoring of rapid cycle DNA amplification
    • Wittwer CT, Herrmann MG, Moss AA, Rasmussen RP. Continuous fluorescence monitoring of rapid cycle DNA amplification. Biotechniques 1997;22:130-1,134-8.
    • (1997) Biotechniques , vol.22 , pp. 130-131
    • Wittwer, C.T.1    Herrmann, M.G.2    Moss, A.A.3    Rasmussen, R.P.4
  • 9
    • 0031568919 scopus 로고    scopus 로고
    • Product differentiation by analysis of DNA melting curves during the polymerase chain reaction
    • Ririe KM, Rasmussen RP, Wittwer CT. Product differentiation by analysis of DNA melting curves during the polymerase chain reaction. Anal. Biochem 1997;245:154-60.
    • (1997) Anal. Biochem , vol.245 , pp. 154-160
    • Ririe, K.M.1    Rasmussen, R.P.2    Wittwer, C.T.3
  • 11
    • 0034855796 scopus 로고    scopus 로고
    • Solution-based scanning for single-base alterations using a double-stranded DNA binding dye and fluorescence-melting profiles
    • Elenitoba-Johnson KSJ, Bohling SD. Solution-based scanning for single-base alterations using a double-stranded DNA binding dye and fluorescence-melting profiles. Am J Pathol 2001;159:845-53.
    • (2001) Am J Pathol , vol.159 , pp. 845-853
    • Elenitoba-Johnson, K.S.J.1    Bohling, S.D.2
  • 13
    • 0036328352 scopus 로고    scopus 로고
    • Homogeneous amplification and mutation scanning of the p53 gene using fluorescent hybridization probes
    • Millward H., Samowitz W., Wittwer CT, Bernard PS. Homogeneous amplification and mutation scanning of the p53 gene using fluorescent hybridization probes. Clin Chem 2002;48:1321-8.
    • (2002) Clin Chem , vol.48 , pp. 1321-1328
    • Millward, H.1    Samowitz, W.2    Wittwer, C.T.3    Bernard, P.S.4
  • 14
    • 0035283211 scopus 로고    scopus 로고
    • Fluorescein-labeled oligonucleotides for real-time PCR: Using the inherent quenching of deoxyguanosine nucleotides
    • Crockett AO, Wittwer CT. Fluorescein-labeled oligonucleotides for real-time PCR: using the inherent quenching of deoxyguanosine nucleotides. Anal Biochem 2001;290:89-97.
    • (2001) Anal Biochem , vol.290 , pp. 89-97
    • Crockett, A.O.1    Wittwer, C.T.2
  • 16
    • 0034118889 scopus 로고    scopus 로고
    • β-Globin genotyping by multiplexing probe melting temperature and color
    • Herrmann M, Dobrowolski S, Wittwer CT. β-Globin genotyping by multiplexing probe melting temperature and color. Clin Chem 2000;46:425-8.
    • (2000) Clin Chem , vol.46 , pp. 425-428
    • Herrmann, M.1    Dobrowolski, S.2    Wittwer, C.T.3
  • 17
    • 0032761938 scopus 로고    scopus 로고
    • Optimization of an automated protocol to isolate DNA from Guthrie cards
    • Heath E, O'Brien D, Banas R, Dobrowolski SF. Optimization of an automated protocol to isolate DNA from Guthrie cards. Arch Pathol Lab Med 1999;123:1154-60.
    • (1999) Arch Pathol Lab Med , vol.123 , pp. 1154-1160
    • Heath, E.1    O'Brien, D.2    Banas, R.3    Dobrowolski, S.F.4
  • 19
    • 0000868685 scopus 로고
    • Savitzky-Golay smoothing filters
    • Press WH, Teukolsky SA, Vetterling WT, Flannery BP, eds. New York: Cambridge University Press
    • Savitzky-Golay smoothing filters. In: Press WH, Teukolsky SA, Vetterling WT, Flannery BP, eds. Numerical recipes in C, 2nd ed. New York: Cambridge University Press, 1992:650-5.
    • (1992) Numerical Recipes in C, 2nd Ed , pp. 650-655
  • 21
    • 0034771194 scopus 로고    scopus 로고
    • 2+, deoxynucleotide triphosphate, and dimethyl sulfoxide concentrations with comparison to alternative empirical formulas
    • 2+, deoxynucleotide triphosphate, and dimethyl sulfoxide concentrations with comparison to alternative empirical formulas. Clin Chem 2001;47:1956-61.
    • (2001) Clin Chem , vol.47 , pp. 1956-1961
    • Von Ahsen, N.1    Wittwer, C.T.2    Schutz, E.3
  • 22
    • 0013351171 scopus 로고    scopus 로고
    • Real-Time PCR
    • Persing D, Tenover F, Relman D, White T, Tang Y, Versalovic J, Unger B, eds. Washington, DC: ASM Press:in press
    • Wittwer CT, Kusukawa N. Real-Time PCR. In: Persing D, Tenover F, Relman D, White T, Tang Y, Versalovic J, Unger B, eds. Diagnostic molecular microbiology: principles and applications. Washington, DC: ASM Press, 2003:in press.
    • (2003) Diagnostic Molecular Microbiology: Principles and Applications
    • Wittwer, C.T.1    Kusukawa, N.2
  • 23
    • 0033961406 scopus 로고    scopus 로고
    • Rapid detection of deletion mutations in inherited metabolic diseases by melting curve analysis with LightCycler
    • Aoshima T, Sekido Y, Miyazaki T, Kajita M, Mimura S, Watanabe K, et al. Rapid detection of deletion mutations in inherited metabolic diseases by melting curve analysis with LightCycler. Clin Chem 2000;46:119-22.
    • (2000) Clin Chem , vol.46 , pp. 119-122
    • Aoshima, T.1    Sekido, Y.2    Miyazaki, T.3    Kajita, M.4    Mimura, S.5    Watanabe, K.6
  • 25
    • 0033762190 scopus 로고    scopus 로고
    • Flexibility of melting temperature assay for rapid detection of insertions, deletions, and single-point mutations of the AGXT gene responsible for type 1 primary hyperoxaluria
    • Pirulli D, Boniotto M, Puzzer D, Spano A, Amoroso A, Crovella S. Flexibility of melting temperature assay for rapid detection of insertions, deletions, and single-point mutations of the AGXT gene responsible for type 1 primary hyperoxaluria. Clin Chem 2000;46:1842-4.
    • (2000) Clin Chem , vol.46 , pp. 1842-1844
    • Pirulli, D.1    Boniotto, M.2    Puzzer, D.3    Spano, A.4    Amoroso, A.5    Crovella, S.6
  • 26
    • 0036708313 scopus 로고    scopus 로고
    • Detection and genotyping of oocysts of Cryptosporidium parvum by real-time PCR and melting curve analysis
    • Tanriverdi S, Tanyeli A, Baslamisli F, Koksal F, Kilinc Y, Feng X, et al. Detection and genotyping of oocysts of Cryptosporidium parvum by real-time PCR and melting curve analysis. J Clin Microbiol 2002;40:3237-44.
    • (2002) J Clin Microbiol , vol.40 , pp. 3237-3244
    • Tanriverdi, S.1    Tanyeli, A.2    Baslamisli, F.3    Koksal, F.4    Kilinc, Y.5    Feng, X.6
  • 27
    • 0036351297 scopus 로고    scopus 로고
    • Single-tube genotyping of MBL-2 polymorphisms using melting temperature analysis
    • Hladnik U, Braida L, Boniotto M, Pirulti D, Gerin F, Amoroso A, et al. Single-tube genotyping of MBL-2 polymorphisms using melting temperature analysis. Clin Exp Med 2002;2:105-8.
    • (2002) Clin Exp Med , vol.2 , pp. 105-108
    • Hladnik, U.1    Braida, L.2    Boniotto, M.3    Pirulti, D.4    Gerin, F.5    Amoroso, A.6
  • 28
    • 0034949833 scopus 로고    scopus 로고
    • Limitations of genotyping based on amplicon melting temperature
    • von Ahsen N, Oellerich M, Schutz E. Limitations of genotyping based on amplicon melting temperature [Letter]. Clin Chem 2001;47:1331-2.
    • (2001) Clin Chem , vol.47 , pp. 1331-1332
    • Von Ahsen, N.1    Oellerich, M.2    Schutz, E.3
  • 30
    • 0016438982 scopus 로고
    • Thermal denaturation of the DNA-ethidium complex. Redistribution of the intercalated dye during melting
    • Aktipis S, Martz WW, Kindelis A. Thermal denaturation of the DNA-ethidium complex. Redistribution of the intercalated dye during melting. Biochemistry 1975;14:326-31.
    • (1975) Biochemistry , vol.14 , pp. 326-331
    • Aktipis, S.1    Martz, W.W.2    Kindelis, A.3
  • 32
    • 0036567249 scopus 로고    scopus 로고
    • Effect of primary and secondary structure of oligodeoxyribonucleotides on the fluorescent properties of conjugated dyes
    • Nazarenko I, Pires R, Lowe B, Obaidy M, Rashtchian A. Effect of primary and secondary structure of oligodeoxyribonucleotides on the fluorescent properties of conjugated dyes. Nucleic Acids Res 2002;30:2089-95.
    • (2002) Nucleic Acids Res , vol.30 , pp. 2089-2095
    • Nazarenko, I.1    Pires, R.2    Lowe, B.3    Obaidy, M.4    Rashtchian, A.5
  • 33
    • 0025944267 scopus 로고
    • DNA probes: Applications of the principles of nucleic acid hybridization
    • Wetmur JG. DNA probes: applications of the principles of nucleic acid hybridization. Crit Rev Biochem Mol Biol 1991;26:227-59.
    • (1991) Crit Rev Biochem Mol Biol , vol.26 , pp. 227-259
    • Wetmur, J.G.1
  • 34
    • 0023476285 scopus 로고
    • Detection and localization of single base changes by denaturing gradient electrophoresis
    • Myers RM, Maniatis T, Lerman, LS. Detection and localization of single base changes by denaturing gradient electrophoresis. Methods Enzymol 1987;155:501-27.
    • (1987) Methods Enzymol , vol.155 , pp. 501-527
    • Myers, R.M.1    Maniatis, T.2    Lerman, L.S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.