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Volumn 6, Issue 12, 2011, Pages

High-resolution melting genotyping of enterococcus faecium based on multilocus sequence typing derived single nucleotide polymorphisms

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIUM ISOLATE; BLOOD CULTURE; CONTROLLED STUDY; DNA BASE COMPOSITION; ENTEROCOCCUS FAECIUM; GENOTYPE; HIGH RESOLUTION MELTING ANALYSIS; INTERMETHOD COMPARISON; MULTILOCUS SEQUENCE TYPING; NONHUMAN; POPULATION STRUCTURE; PULSED FIELD GEL ELECTROPHORESIS; REAL TIME POLYMERASE CHAIN REACTION; REPRODUCIBILITY; SINGLE NUCLEOTIDE POLYMORPHISM; CLASSIFICATION; DNA DENATURATION; GENETICS; GENOTYPING TECHNIQUE; ISOLATION AND PURIFICATION; METHODOLOGY;

EID: 83455182089     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0029189     Document Type: Article
Times cited : (32)

References (17)
  • 1
    • 73649086225 scopus 로고    scopus 로고
    • Transition of Enterococcus faecium from commensal organism to nosocomial pathogen
    • Willems RJ, van Schaik W, (2009) Transition of Enterococcus faecium from commensal organism to nosocomial pathogen. Future Microbiol 4: 1125-1135.
    • (2009) Future Microbiol , vol.4 , pp. 1125-1135
    • Willems, R.J.1    van Schaik, W.2
  • 2
    • 77955455241 scopus 로고    scopus 로고
    • Comparison of an automated repetitive-sequence-based PCR microbial typing system with pulsed-field gel electrophoresis for molecular typing of vancomycin-resistant Enterococcus faecium
    • Chuang YC, Wang JT, Chen ML, Chen YC, (2010) Comparison of an automated repetitive-sequence-based PCR microbial typing system with pulsed-field gel electrophoresis for molecular typing of vancomycin-resistant Enterococcus faecium. J Clin Microbiol 48: 2897-2901.
    • (2010) J Clin Microbiol , vol.48 , pp. 2897-2901
    • Chuang, Y.C.1    Wang, J.T.2    Chen, M.L.3    Chen, Y.C.4
  • 3
    • 0036259775 scopus 로고    scopus 로고
    • Multilocus sequence typing scheme for Enterococcus faecium
    • Homan WL, Tribe D, Poznanski S, Li M, Hogg G, et al. (2002) Multilocus sequence typing scheme for Enterococcus faecium. J Clin Microbiol 40: 1963-1971.
    • (2002) J Clin Microbiol , vol.40 , pp. 1963-1971
    • Homan, W.L.1    Tribe, D.2    Poznanski, S.3    Li, M.4    Hogg, G.5
  • 5
    • 33747051228 scopus 로고    scopus 로고
    • Genotyping of Campylobacter jejuni using seven single-nucleotide polymorphisms in combination with flaA short variable region sequencing
    • Price EP, Thiruvenkataswamy V, Mickan L, Unicomb L, Rios RE, et al. (2006) Genotyping of Campylobacter jejuni using seven single-nucleotide polymorphisms in combination with flaA short variable region sequencing. J Med Microbiol 55: 1061-1070.
    • (2006) J Med Microbiol , vol.55 , pp. 1061-1070
    • Price, E.P.1    Thiruvenkataswamy, V.2    Mickan, L.3    Unicomb, L.4    Rios, R.E.5
  • 6
    • 78650907949 scopus 로고    scopus 로고
    • Genotyping of Enterococcus faecalis and Enterococcus faecium Isolates by Use of a Set of Eight Single Nucleotide Polymorphisms
    • Rathnayake IU, Hargreaves M, Huygens F, (2011) Genotyping of Enterococcus faecalis and Enterococcus faecium Isolates by Use of a Set of Eight Single Nucleotide Polymorphisms. J Clin Microbiol 49: 367-372.
    • (2011) J Clin Microbiol , vol.49 , pp. 367-372
    • Rathnayake, I.U.1    Hargreaves, M.2    Huygens, F.3
  • 7
    • 79959480004 scopus 로고    scopus 로고
    • Preliminary validation of a novel high resolution melt-based typing method based on the multilocus sequence typing scheme of Streptococcus pyogenes
    • Richardson LJ, Tong SY, Towers RJ, Huygens F, McGregor K, et al. (2011) Preliminary validation of a novel high resolution melt-based typing method based on the multilocus sequence typing scheme of Streptococcus pyogenes. Clin Microbiol Infect 17: 1426-1434.
    • (2011) Clin Microbiol Infect , vol.17 , pp. 1426-1434
    • Richardson, L.J.1    Tong, S.Y.2    Towers, R.J.3    Huygens, F.4    McGregor, K.5
  • 8
    • 79959464855 scopus 로고    scopus 로고
    • The utility of high-resoultion melting analysis of SNP nucleated PCR amplicons - a MLST based Staphylococcus aureus typing scheme
    • doi:19710.11371/journal.pone.0019749
    • Lilliebridge RA, Tong SYC, Giffard PM, Holt DC, (2011) The utility of high-resoultion melting analysis of SNP nucleated PCR amplicons- a MLST based Staphylococcus aureus typing scheme. PLoS ONE 6: e19749 doi:19710.11371/journal.pone.0019749.
    • (2011) PLoS ONE , vol.6
    • Lilliebridge, R.A.1    Tong, S.Y.C.2    Giffard, P.M.3    Holt, D.C.4
  • 9
    • 77957009812 scopus 로고    scopus 로고
    • A sustained hospital outbreak of vancomycin-resistant Enterococcus faecium bacteremia due to emergence of vanB E. faecium sequence type 203
    • Johnson PD, Ballard SA, Grabsch EA, Stinear TP, Seemann T, et al. (2010) A sustained hospital outbreak of vancomycin-resistant Enterococcus faecium bacteremia due to emergence of vanB E. faecium sequence type 203. J Infect Dis 202: 1278-1286.
    • (2010) J Infect Dis , vol.202 , pp. 1278-1286
    • Johnson, P.D.1    Ballard, S.A.2    Grabsch, E.A.3    Stinear, T.P.4    Seemann, T.5
  • 11
    • 1542426071 scopus 로고    scopus 로고
    • Identification and interrogation of highly informative single nucleotide polymorphism sets defined by bacterial multilocus sequence typing databases
    • Robertson GA, Thiruvenkataswamy V, Shilling H, Price EP, Huygens F, et al. (2004) Identification and interrogation of highly informative single nucleotide polymorphism sets defined by bacterial multilocus sequence typing databases. J Med Microbiol 53: 35-45.
    • (2004) J Med Microbiol , vol.53 , pp. 35-45
    • Robertson, G.A.1    Thiruvenkataswamy, V.2    Shilling, H.3    Price, E.P.4    Huygens, F.5
  • 12
    • 0023738045 scopus 로고
    • Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity
    • Hunter PR, Gaston MA, (1988) Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity. J Clin Microbiol 26: 2465-2466.
    • (1988) J Clin Microbiol , vol.26 , pp. 2465-2466
    • Hunter, P.R.1    Gaston, M.A.2
  • 13
    • 33746255226 scopus 로고    scopus 로고
    • Illustration of a common framework for relating multiple typing methods by application to macrolide-resistant Streptococcus pyogenes
    • Carrico JA, Silva-Costa C, Melo-Cristino J, Pinto FR, de Lencastre H, et al. (2006) Illustration of a common framework for relating multiple typing methods by application to macrolide-resistant Streptococcus pyogenes. J Clin Microbiol 44: 2524-2532.
    • (2006) J Clin Microbiol , vol.44 , pp. 2524-2532
    • Carrico, J.A.1    Silva-Costa, C.2    Melo-Cristino, J.3    Pinto, F.R.4    de Lencastre, H.5
  • 14
    • 67650093575 scopus 로고    scopus 로고
    • Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach
    • Francisco AP, Bugalho M, Ramirez M, Carrico JA, (2009) Global optimal eBURST analysis of multilocus typing data using a graphic matroid approach. BMC Bioinformatics 10: 152.
    • (2009) BMC Bioinformatics , vol.10 , pp. 152
    • Francisco, A.P.1    Bugalho, M.2    Ramirez, M.3    Carrico, J.A.4
  • 15
    • 1342304133 scopus 로고    scopus 로고
    • eBURST: Inferring Patterns of Evolutionary Descent among Clusters of Related Bacterial Genotypes from Multilocus Sequence Typing Data
    • Feil EJ, Li BC, Aanensen DM, Hanage WP, Spratt BG, (2004) eBURST: Inferring Patterns of Evolutionary Descent among Clusters of Related Bacterial Genotypes from Multilocus Sequence Typing Data. J Bacteriol 186: 1518-1530.
    • (2004) J Bacteriol , vol.186 , pp. 1518-1530
    • Feil, E.J.1    Li, B.C.2    Aanensen, D.M.3    Hanage, W.P.4    Spratt, B.G.5
  • 16
    • 34249745345 scopus 로고    scopus 로고
    • Assessing the reliability of eBURST using simulated populations with known ancestry
    • Turner KM, Hanage WP, Fraser C, Connor TR, Spratt BG, (2007) Assessing the reliability of eBURST using simulated populations with known ancestry. BMC Microbiol 7: 30.
    • (2007) BMC Microbiol , vol.7 , pp. 30
    • Turner, K.M.1    Hanage, W.P.2    Fraser, C.3    Connor, T.R.4    Spratt, B.G.5
  • 17
    • 66749141446 scopus 로고    scopus 로고
    • Rapid molecular genotyping and clonal complex assignment of Staphylococcus aureus isolates by PCR coupled to electrospray ionization-mass spectrometry
    • Hall TA, Sampath R, Blyn LB, Ranken R, Ivy C, et al. (2009) Rapid molecular genotyping and clonal complex assignment of Staphylococcus aureus isolates by PCR coupled to electrospray ionization-mass spectrometry. J Clin Microbiol 47: 1733-1741.
    • (2009) J Clin Microbiol , vol.47 , pp. 1733-1741
    • Hall, T.A.1    Sampath, R.2    Blyn, L.B.3    Ranken, R.4    Ivy, C.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.