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Volumn 694, Issue 1-3, 2012, Pages 45-52

Identification and validation of a novel lead compound targeting 4-diphosphocytidyl-2-C-methylerythritol synthetase (IspD) of mycobacteria

Author keywords

4 diphosphocytidyl 2 C methyl d erythritol synthase (CDP MEP synthase, IspD); Antituberculosis activity; DMB (Domiphen bromide); Inhibitor; Target

Indexed keywords

4 DIPHOSPHOCYTIDYL 2 C METHYLERYTHRITOL SYNTHETASE; BACTERIAL ENZYME; DOMIPHEN BROMIDE; ISONIAZID; KANAMYCIN; RIFAMPICIN; TETRACYCLINE; UNCLASSIFIED DRUG;

EID: 84867336808     PISSN: 00142999     EISSN: 18790712     Source Type: Journal    
DOI: 10.1016/j.ejphar.2012.08.012     Document Type: Article
Times cited : (23)

References (35)
  • 1
    • 25444459889 scopus 로고    scopus 로고
    • Deletion of Cg-emb in corynebacterianeae leads to a novel truncated cell wall arabinogalactan, whereas inactivation of Cg-ubiA results in an arabinan-deficient mutant with a cell wall galactan core
    • L.J. Alderwick, E. Radmacher, M. Seidel, R. Gande, P.G. Hitchen, H.R. Morris, A. Dell, H. Sahm, L. Eggeling, and G.S. Besra Deletion of Cg-emb in corynebacterianeae leads to a novel truncated cell wall arabinogalactan, whereas inactivation of Cg-ubiA results in an arabinan-deficient mutant with a cell wall galactan core J. Biol. Chem. 280 2005 32362 32371
    • (2005) J. Biol. Chem. , vol.280 , pp. 32362-32371
    • Alderwick, L.J.1    Radmacher, E.2    Seidel, M.3    Gande, R.4    Hitchen, P.G.5    Morris, H.R.6    Dell, A.7    Sahm, H.8    Eggeling, L.9    Besra, G.S.10
  • 2
    • 0032240304 scopus 로고    scopus 로고
    • Mycobacteria. General culture methodology and safety considerations
    • B.W. Allen Mycobacteria. General culture methodology and safety considerations Methods Mol. Biol. 101 1998 15 30
    • (1998) Methods Mol. Biol. , vol.101 , pp. 15-30
    • Allen, B.W.1
  • 3
    • 11844301664 scopus 로고    scopus 로고
    • A colorimetric assay for the determination of 4-diphosphocytidyl-2-C- methyl-d-erythritol 4-phosphate synthase activity
    • C. Bernal, C. Palacin, A. Boronat, and S. Imperial A colorimetric assay for the determination of 4-diphosphocytidyl-2-C-methyl-d-erythritol 4-phosphate synthase activity Anal. Biochem. 337 2005 55 61
    • (2005) Anal. Biochem. , vol.337 , pp. 55-61
    • Bernal, C.1    Palacin, C.2    Boronat, A.3    Imperial, S.4
  • 6
    • 33947682112 scopus 로고    scopus 로고
    • The cell-wall core of Mycobacterium tuberculosis in the context of drug discovery
    • P.J. Brennan, and D.C. Crick The cell-wall core of Mycobacterium tuberculosis in the context of drug discovery Curr. Top. Med. Chem. 7 2007 475 488
    • (2007) Curr. Top. Med. Chem. , vol.7 , pp. 475-488
    • Brennan, P.J.1    Crick, D.C.2
  • 7
    • 0026673033 scopus 로고
    • High-performance liquid chromatography patterns of Mycobacterium gordonae mycolic acids
    • G.D. Cage High-performance liquid chromatography patterns of Mycobacterium gordonae mycolic acids J. Clin. Microbiol. 30 1992 2402 2407
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 2402-2407
    • Cage, G.D.1
  • 8
    • 77952428880 scopus 로고    scopus 로고
    • Tuberculosis - Time to accelerate progress
    • P. Das, and R. Horton Tuberculosis - time to accelerate progress Lancet 375 2010 1755 1757
    • (2010) Lancet , vol.375 , pp. 1755-1757
    • Das, P.1    Horton, R.2
  • 9
    • 28844484972 scopus 로고    scopus 로고
    • 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (IspC) from Mycobacterium tuberculosis: Towards understanding mycobacterial resistance to fosmidomycin
    • R.K. Dhiman, M.L. Schaeffer, A.M. Bailey, C.A. Testa, H. Scherman, and D.C. Crick 1-Deoxy-d-xylulose 5-phosphate reductoisomerase (IspC) from Mycobacterium tuberculosis: towards understanding mycobacterial resistance to fosmidomycin J. Bacteriol. 187 2005 8395 8402
    • (2005) J. Bacteriol. , vol.187 , pp. 8395-8402
    • Dhiman, R.K.1    Schaeffer, M.L.2    Bailey, A.M.3    Testa, C.A.4    Scherman, H.5    Crick, D.C.6
  • 10
    • 58149109426 scopus 로고    scopus 로고
    • The Mycobacterium tuberculosis MEP (2C-methyl-d-erythritol 4-phosphate) pathway as a new drug target
    • H. Eoh, P.J. Brennan, and D.C. Crick The Mycobacterium tuberculosis MEP (2C-methyl-d-erythritol 4-phosphate) pathway as a new drug target Tuberculosis (Edinburgh) 89 2009 1 11
    • (2009) Tuberculosis (Edinburgh) , vol.89 , pp. 1-11
    • Eoh, H.1    Brennan, P.J.2    Crick, D.C.3
  • 11
    • 37449007556 scopus 로고    scopus 로고
    • Characterization of the Mycobacterium tuberculosis 4-diphosphocytidyl-2- C-methyl-d-erythritol synthase: Potential for drug development
    • H. Eoh, A.C. Brown, L. Buetow, W.N. Hunter, T. Parish, D. Kaur, P.J. Brennan, and D.C. Crick Characterization of the Mycobacterium tuberculosis 4-diphosphocytidyl-2-C-methyl-d-erythritol synthase: potential for drug development J. Bacteriol. 189 2007 8922 8927
    • (2007) J. Bacteriol. , vol.189 , pp. 8922-8927
    • Eoh, H.1    Brown, A.C.2    Buetow, L.3    Hunter, W.N.4    Parish, T.5    Kaur, D.6    Brennan, P.J.7    Crick, D.C.8
  • 12
    • 7244242397 scopus 로고    scopus 로고
    • Acyl-CoA carboxylases (accD2 and accD3), together with a unique polyketide synthase (Cg-pks), are key to mycolic acid biosynthesis in Corynebacterianeae such as Corynebacterium glutamicum and Mycobacterium tuberculosis
    • R. Gande, K.J. Gibson, A.K. Brown, K. Krumbach, L.G. Dover, H. Sahm, S. Shioyama, T. Oikawa, G.S. Besra, and L. Eggeling Acyl-CoA carboxylases (accD2 and accD3), together with a unique polyketide synthase (Cg-pks), are key to mycolic acid biosynthesis in Corynebacterianeae such as Corynebacterium glutamicum and Mycobacterium tuberculosis J. Biol. Chem. 279 2004 44847 44857
    • (2004) J. Biol. Chem. , vol.279 , pp. 44847-44857
    • Gande, R.1    Gibson, K.J.2    Brown, A.K.3    Krumbach, K.4    Dover, L.G.5    Sahm, H.6    Shioyama, S.7    Oikawa, T.8    Besra, G.S.9    Eggeling, L.10
  • 13
    • 77952542701 scopus 로고    scopus 로고
    • Multidrug-resistant and extensively drug-resistant tuberculosis: A threat to global control of tuberculosis
    • N.R. Gandhi, P. Nunn, K. Dheda, H.S. Schaaf, M. Zignol, D. van Soolingen, P. Jensen, and J. Bayona Multidrug-resistant and extensively drug-resistant tuberculosis: a threat to global control of tuberculosis Lancet 375 2010 1830 1843
    • (2010) Lancet , vol.375 , pp. 1830-1843
    • Gandhi, N.R.1    Nunn, P.2    Dheda, K.3    Schaaf, H.S.4    Zignol, M.5    Van Soolingen, D.6    Jensen, P.7    Bayona, J.8
  • 16
    • 34547925743 scopus 로고    scopus 로고
    • Nonphosphate inhibitors of IspE protein, a kinase in the non-mevalonate pathway for isoprenoid biosynthesis and a potential target for antimalarial therapy
    • A.K. Hirsch, S. Lauw, P. Gersbach, W.B. Schweizer, F. Rohdich, W. Eisenreich, A. Bacher, and F. Diederich Nonphosphate inhibitors of IspE protein, a kinase in the non-mevalonate pathway for isoprenoid biosynthesis and a potential target for antimalarial therapy ChemMedChem 2 2007 806 810
    • (2007) ChemMedChem , vol.2 , pp. 806-810
    • Hirsch, A.K.1    Lauw, S.2    Gersbach, P.3    Schweizer, W.B.4    Rohdich, F.5    Eisenreich, W.6    Bacher, A.7    Diederich, F.8
  • 18
    • 33750863791 scopus 로고    scopus 로고
    • Nonmevalonate terpene biosynthesis enzymes as antiinfective drug targets: Substrate synthesis and high-throughput screening methods
    • V. Illarionova, J. Kaiser, E. Ostrozhenkova, A. Bacher, M. Fischer, W. Eisenreich, and F. Rohdich Nonmevalonate terpene biosynthesis enzymes as antiinfective drug targets: substrate synthesis and high-throughput screening methods J. Org. Chem. 71 2006 8824 8834
    • (2006) J. Org. Chem. , vol.71 , pp. 8824-8834
    • Illarionova, V.1    Kaiser, J.2    Ostrozhenkova, E.3    Bacher, A.4    Fischer, M.5    Eisenreich, W.6    Rohdich, F.7
  • 20
    • 0036690439 scopus 로고    scopus 로고
    • Mevalonate and nonmevalonate pathways for the biosynthesis of isoprene units
    • T. Kuzuyama Mevalonate and nonmevalonate pathways for the biosynthesis of isoprene units Biosci. Biotechnol. Biochem. 66 2002 1619 1627
    • (2002) Biosci. Biotechnol. Biochem. , vol.66 , pp. 1619-1627
    • Kuzuyama, T.1
  • 21
    • 0016684892 scopus 로고
    • Differentiation of Mycobacterium, Nocardia, and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates
    • D.E. Minnikin, L. Alshamaony, and M. Goodfellow Differentiation of Mycobacterium, Nocardia, and related taxa by thin-layer chromatographic analysis of whole-organism methanolysates J. Gen. Microbiol. 88 1975 200 204
    • (1975) J. Gen. Microbiol. , vol.88 , pp. 200-204
    • Minnikin, D.E.1    Alshamaony, L.2    Goodfellow, M.3
  • 22
    • 0021362222 scopus 로고
    • Mycolic acid patterns of representative strains of Mycobacterium fortuitum, 'Myobacterium peregrinum' and Mycobacterium smegmatis
    • D.E. Minnikin, S.M. Minnikin, I.G. Hutchinson, M. Goodfellow, and J.M. Grange Mycolic acid patterns of representative strains of Mycobacterium fortuitum, 'Myobacterium peregrinum' and Mycobacterium smegmatis J. Gen. Microbiol. 130 1984 363 367
    • (1984) J. Gen. Microbiol. , vol.130 , pp. 363-367
    • Minnikin, D.E.1    Minnikin, S.M.2    Hutchinson, I.G.3    Goodfellow, M.4    Grange, J.M.5
  • 23
    • 57649129415 scopus 로고    scopus 로고
    • Menaquinone as well as ubiquinone as a bound quinone crucial for catalytic activity and intramolecular electron transfer in Escherichia coli membrane-bound glucose dehydrogenase
    • G. Mustafa, C.T. Migita, Y. Ishikawa, K. Kobayashi, S. Tagawa, and M. Yamada Menaquinone as well as ubiquinone as a bound quinone crucial for catalytic activity and intramolecular electron transfer in Escherichia coli membrane-bound glucose dehydrogenase J. Biol. Chem. 283 2008 28169 28175
    • (2008) J. Biol. Chem. , vol.283 , pp. 28169-28175
    • Mustafa, G.1    Migita, C.T.2    Ishikawa, Y.3    Kobayashi, K.4    Tagawa, S.5    Yamada, M.6
  • 24
    • 0032254231 scopus 로고    scopus 로고
    • Mycobacteria. Bugs and bugbears
    • T. Parish, and N.G. Stoker Mycobacteria. Bugs and bugbears Methods Mol Biol. 101 1998 1 13
    • (1998) Methods Mol Biol. , vol.101 , pp. 1-13
    • Parish, T.1    Stoker, N.G.2
  • 25
    • 4644341680 scopus 로고    scopus 로고
    • Kinetic analysis of Escherichia coli 2-C-methyl-d-erythritol-4-phosphate cytidyltransferase, wild type and mutants, reveals roles of active site amino acids
    • S.B. Richard, A.M. Lillo, C.N. Tetzlaff, M.E. Bowman, J.P. Noel, and D.E. Cane Kinetic analysis of Escherichia coli 2-C-methyl-d-erythritol-4-phosphate cytidyltransferase, wild type and mutants, reveals roles of active site amino acids Biochemistry 43 2004 12189 12197
    • (2004) Biochemistry , vol.43 , pp. 12189-12197
    • Richard, S.B.1    Lillo, A.M.2    Tetzlaff, C.N.3    Bowman, M.E.4    Noel, J.P.5    Cane, D.E.6
  • 26
    • 0033213706 scopus 로고    scopus 로고
    • The discovery of a mevalonate-independent pathway for isoprenoid biosynthesis in bacteria, algae and higher plants
    • M. Rohmer The discovery of a mevalonate-independent pathway for isoprenoid biosynthesis in bacteria, algae and higher plants Nat. Prod. Rep. 16 1999 565 574
    • (1999) Nat. Prod. Rep. , vol.16 , pp. 565-574
    • Rohmer, M.1
  • 28
    • 0019473142 scopus 로고
    • Biosynthesis of menaquinones. Enzymatic prenylation of 1,4-dihydroxy-2-naphthoate by Micrococcus luteus membrane fractions
    • Y. Saito, and K. Ogura Biosynthesis of menaquinones. Enzymatic prenylation of 1,4-dihydroxy-2-naphthoate by Micrococcus luteus membrane fractions J. Biochem. 89 1981 1445 1452
    • (1981) J. Biochem. , vol.89 , pp. 1445-1452
    • Saito, Y.1    Ogura, K.2
  • 29
    • 84867332194 scopus 로고    scopus 로고
    • In vitro anti-tubercular screening of newly synthesized benzimidazole derivatives
    • M.S. Yar, M.M. Abdullah, and J. Majeed In vitro anti-tubercular screening of newly synthesized benzimidazole derivatives World Acad. Sci. Eng. Technol. 55 2009 593 599
    • (2009) World Acad. Sci. Eng. Technol. , vol.55 , pp. 593-599
    • Yar, M.S.1    Abdullah, M.M.2    Majeed, J.3
  • 30
    • 0029670675 scopus 로고    scopus 로고
    • Menaquinone (vitamin K2) biosynthesis: Localization and characterization of the menE gene from Escherichia coli
    • V. Sharma, M.E. Hudspeth, and R. Meganathan Menaquinone (vitamin K2) biosynthesis: localization and characterization of the menE gene from Escherichia coli Gene 168 1996 43 48
    • (1996) Gene , vol.168 , pp. 43-48
    • Sharma, V.1    Hudspeth, M.E.2    Meganathan, R.3
  • 31
    • 36949007177 scopus 로고    scopus 로고
    • Biosynthesis of isoprenoids: Characterization of a functionally active recombinant 2-C-methyl-d-erythritol 4-phosphate cytidyltransferase (IspD) from Mycobacterium tuberculosis H37Rv
    • W. Shi, J. Feng, M. Zhang, X. Lai, S. Xu, X. Zhang, and H. Wang Biosynthesis of isoprenoids: characterization of a functionally active recombinant 2-C-methyl-d-erythritol 4-phosphate cytidyltransferase (IspD) from Mycobacterium tuberculosis H37Rv J. Biochem. Mol. Biol. 40 2007 911 920
    • (2007) J. Biochem. Mol. Biol. , vol.40 , pp. 911-920
    • Shi, W.1    Feng, J.2    Zhang, M.3    Lai, X.4    Xu, S.5    Zhang, X.6    Wang, H.7
  • 32
    • 33644851756 scopus 로고    scopus 로고
    • Cloning and expression of IspDF from Mesorhizobium loti. Characterization of a bifunctional protein that catalyzes non-consecutive steps in the methylerythritol phosphate pathway
    • C.A. Testa, C. Lherbet, F. Pojer, J.P. Noel, and C.D. Poulter Cloning and expression of IspDF from Mesorhizobium loti. Characterization of a bifunctional protein that catalyzes non-consecutive steps in the methylerythritol phosphate pathway Biochim. Biophys. Acta 1764 2006 85 96
    • (2006) Biochim. Biophys. Acta , vol.1764 , pp. 85-96
    • Testa, C.A.1    Lherbet, C.2    Pojer, F.3    Noel, J.P.4    Poulter, C.D.5
  • 33
    • 84876316921 scopus 로고    scopus 로고
    • Structure based de novo design of IspD inhibitors as anti-tubercular agents
    • Varikoti, R.A., Gangwal, R., Dhoke, G., Ramaswamy, V.K., Sangamwar, A., 2012. Structure based de novo design of IspD inhibitors as anti-tubercular agents. Available from Nature Precedings 〈http://dx.doi.org/10.1038/npre. 2012.7088.1〉.
    • (2012) Nature Precedings
    • Varikoti, R.A.1    Gangwal, R.2    Dhoke, G.3    Ramaswamy, V.K.4    Sangamwar, A.5
  • 34
    • 0028064838 scopus 로고
    • Recognition of the lipid intermediate for arabinogalactan/arabinomannan biosynthesis and its relation to the mode of action of ethambutol on mycobacteria
    • B.A. Wolucka, M.R. McNeil, E. de Hoffmann, T. Chojnacki, and P.J. Brennan Recognition of the lipid intermediate for arabinogalactan/arabinomannan biosynthesis and its relation to the mode of action of ethambutol on mycobacteria J. Biol. Chem. 269 1994 23328 23335
    • (1994) J. Biol. Chem. , vol.269 , pp. 23328-23335
    • Wolucka, B.A.1    McNeil, M.R.2    De Hoffmann, E.3    Chojnacki, T.4    Brennan, P.J.5
  • 35
    • 0033003760 scopus 로고    scopus 로고
    • A Simple statistical parameter for use in evaluation and validation of high throughput screening assays
    • J.H. Zhang, T.D. Chung, and K.R. Oldenburg A Simple statistical parameter for use in evaluation and validation of high throughput screening assays J. Biomol. Screen. 4 1999 67 73
    • (1999) J. Biomol. Screen. , vol.4 , pp. 67-73
    • Zhang, J.H.1    Chung, T.D.2    Oldenburg, K.R.3


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