Encapsulation-induced stress helps Saccharomyces cerevisiae resist convertible lignocellulose derived inhibitors

International Journal of Molecular Sciences

Volumn 13, Issue 9, 2012, Pages 11881-11894

  Westman, Johan O ^a,b   Manikondu, Ramesh Babu ^a   Franzén, Carl Johan ^b   Taherzadeh, Mohammad J ^a  

^a UNIVERSITY OF BORÅS   (Sweden)

^b CHALMERS UNIVERSITY OF TECHNOLOGY   (Sweden)

Author keywords

Biofuel; Carboxylic acids; Encapsulation; Ethanol; Furfural; HMF (5 hydroxymethyl furfural); Inhibitors; Lignocellulosic hydrolysate; q PCR; Saccharomyces cerevisiae

Indexed keywords

LIGNOCELLULOSE;

ALCOHOL PRODUCTION; ANAEROBIC METABOLISM; ARTICLE; ATR1 GENE; BIOFUEL PRODUCTION; CELL ENCAPSULATION; CELL STRESS; CELLULAR STRESS RESPONSE; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; FLR1 GENE; FUNGAL STRAIN; GENE; GENE EXPRESSION; GLUCOSE INTAKE; NONHUMAN; POLYMERASE CHAIN REACTION; SACCHAROMYCES CEREVISIAE; TRANSCRIPTOMICS; YAP1 GENE; YEAST CELL;

PICEA; SACCHAROMYCES CEREVISIAE;

EID: 84866949703     PISSN: 16616596     EISSN: 14220067     Source Type: Journal    
DOI: 10.3390/ijms130911881     Document Type: Article

References (34)

1. Taherzadeh, M.J.; Karimi, K. Pretreatment of lignocellulosic wastes to improve ethanol and biogas production: A review. Int. J. Mol. Sci. 2008, 9, 1621-1651.
2. Taherzadeh, M.J.; Eklund, R.; Gustafsson, L.; Niklasson, C.; Liden, G. Characterization and fermentation of dilute-acid hydrolyzates from wood. Ind. Eng. Chem. Res. 1997, 36, 4659-4665.
3. Klinke, H.B.; Thomsen, A.B.; Ahring, B.K. Inhibition of ethanol-producing yeast and bacteria by degradation products produced during pre-treatment of biomass. Appl. Microbiol. Biotechnol. 2004, 66, 10-26.
4. Almeida, J.R.M.; Modig, T.; Petersson, A.; Hähn-Hägerdal, B.; Lidén, G.; Gorwa-Grauslund, M.F. Increased tolerance and conversion of inhibitors in lignocellulosic hydrolysates by Saccharomyces cerevisiae. J. Chem. Technol. Biotechnol. 2007, 82, 340-349.
5. Zaldivar, J.; Nielsen, J.; Olsson, L. Fuel ethanol production from lignocellulose: A challenge for metabolic engineering and process integration. Appl. Microbiol. Biotechnol. 2001, 56, 17-34.
6. Taherzadeh, M.J.; Niklasson, C.; Liden, G. Conversion of dilute-acid hydrolyzates of spruce and birch to ethanol by fed-batch fermentation. Bioresour. Technol. 1999, 69, 59-66.
7. Sárvári Horváth, I.; Taherzadeh, M.J.; Niklasson, C.; Lidén, G. Effects of furfural on anaerobic continuous cultivation of Saccharomyces cerevisiae. Biotechnol. Bioeng. 2001, 75, 540-549.
8. Talebnia, F.; Taherzadeh, M.J. In situ detoxification and continuous cultivation of dilute-acid hydrolyzate to ethanol by encapsulated S. cerevisiae. J. Biotechnol. 2006, 125, 377-384.
9. Brandberg, T.; Karimi, K.; Taherzadeh, M.J.; Franzén, C.J.; Gustafsson, L. Continuous fermentation of wheat-supplemented lignocellulose hydrolysate with different types of cell retention. Biotechnol. Bioeng. 2007, 98, 80-90.
10. Cheong, S.H.; Park, J.K.; Kim, B.S.; Chang, H.N. Microencapsulation of yeast cells in the calcium alginate membrane. Biotechnol. Tech. 1993, 7, 879-884.
11. Taherzadeh, M.J.; Gustafsson, L.; Niklasson, C.; Lidén, G. Conversion of furfural in aerobic and anaerobic batch fermentation of glucose by Saccharomyces cerevisiae. J. Biosci. Bioeng. 1999, 87, 169-174.
12. Vilela-Moura, A.; Schuller, D.; Mendes-Faia, A.; Silva, R.; Chaves, S.; Sousa, M.; Côrte-Real, M. The impact of acetate metabolism on yeast fermentative performance and wine quality: Reduction of volatile acidity of grape musts and wines. Appl. Microbiol. Biotechnol. 2011, 89, 271-280.
13. Alriksson, B.; Sárvári Horváth, I.; Jönsson, L.J. Overexpression of Saccharomyces cerevisiae transcription factor and multidrug resistance genes conveys enhanced resistance to lignocellulose-derived fermentation inhibitors. Process Biochem. 2010, 45, 264-271.
14. Westman, J.O.; Taherzadeh, M.J.; Franzén, C.J. Inhibitor tolerance and flocculation of a yeast strain suitable for 2nd generation bioethanol production. Electron. J. Biotechnol. 2012, 15, doi:10.2225/vol15-issue3-fulltext-8.
15. Talebnia, F.; Taherzadeh, M.J. Physiological and morphological study of encapsulated Saccharomyces cerevisiae. Enzyme Microb. Technol. 2007, 41, 683-688.
16. Talebnia, F.; Niklasson, C.; Taherzadeh, M.J. Ethanol production from glucose and dilute-acid hydrolyzates by encapsulated S. cerevisiae. Biotechnol. Bioeng. 2005, 90, 345-353.
17. Wu, A.; Wemmie, J.A.; Edgington, N.P.; Goebl, M.; Guevara, J.L.; Moye-Rowley, W.S. Yeast bZip proteins mediate pleiotropic drug and metal resistance. J. Biol. Chem. 1993, 268, 18850-18858.
18. Herrero, E.; Ros, J.; Bellí, G.; Cabiscol, E. Redox control and oxidative stress in yeast cells. Biochim. Biophys. Acta 2008, 1780, 1217-1235.
19. Wiatrowski, H.A.; Carlson, M. Yap1 accumulates in the nucleus in response to carbon stress in Saccharomyces cerevisiae. Eukaryotic Cell 2003, 2, 19-26.
20. Coleman, S.T.; Tseng, E.; Moye-Rowley, W.S. Saccharomyces cerevisiae basic region-leucine zipper protein regulatory networks converge at the ATR1 structural gene. J. Biol. Chem. 1997, 272, 23224-23230.
21. Alarco, A.-M.; Balan, I.; Talibi, D.; Mainville, N.; Raymond, M. AP1-mediated multidrug resistance in Saccharomyces cerevisiae requires FLR1 encoding a transporter of the major facilitator superfamily. J. Biol. Chem. 1997, 272, 19304-19313.
22. Kanazawa, S.; Driscoll, M.; Struhl, K. ATR1, a Saccharomyces cerevisiae gene encoding a transmembrane protein required for aminotriazole resistance. Mol. Cell. Biol. 1988, 8, 664-673.
23. Ge, X.M.; Zhang, L.; Bai, F.W. Impacts of yeast floc size distributions on their observed rates for substrate uptake and product formation. Enzyme Microb. Technol. 2006, 39, 289-295.
24. Elliott, B.; Futcher, B. Stress resistance of yeast cells is largely independent of cell cycle phase. Yeast 1993, 9, 33-42.
25. Gasch, A.P.; Spellman, P.T.; Kao, C.M.; Carmel-Harel, O.; Eisen, M.B.; Storz, G.; Botstein, D.; Brown, P.O. Genomic expression programs in the response of yeast cells to environmental changes. Mol. Biol. Cell 2000, 11, 4241-4257.
26. Slattery, M.G.; Heideman, W. Coordinated regulation of growth genes in Saccharomyces cerevisiae. Cell Cycle 2007, 6, 1210-1219.
27. Pourbafrani, M.; Talebnia, F.; Niklasson, C.; Taherzadeh, M.J. Protective effect of encapsulation in fermentation of limonene-contained media and orange peel hydrolyzate. Int. J. Mol. Sci. 2007, 8, 777-787.
28. Taherzadeh, M.J.; Lidén, G.; Gustafsson, L.; Niklasson, C. The effects of pantothenate deficiency and acetate addition on anaerobic batch fermentation of glucose by Saccharomyces cerevisiae. Appl. Microbiol. Biotechnol. 1996, 46, 176-182.
29. Nigam, S.C.; Tsao, I.-F.; Sakoda, A.; Wang, H.Y. Techniques for preparing hydrogel membrane capsules. Biotechnol. Lett. 1988, 2, 271-276.
30. Chang, H.N.; Seong, G.H.; Yoo, I.-K.; Park, J.K.; Seo, J.-H. Microencapsulation of recombinant Saccharomyces cerevisiae cells with invertase activity in liquid-core alginate capsules. Biotechnol. Bioeng. 1996, 51, 157-162.
31. Gåserød, O.; Sannes, A.; Skjåk-Bræk, G. Microcapsules of alginate-chitosan. II. A study of capsule stability and permeability. Biomaterials 1999, 20, 773-783.
32. Taherzadeh, M.J.; Niklasson, C.; Lidén, G. Acetic acid-friend or foe in anaerobic batch conversion of glucose to ethanol by Saccharomyces cerevisiae? Chem. Eng. Sci. 1997, 52, 2653-2659.
33. Teste, M.-A.; Duquenne, M.; Francois, J.; Parrou, J.-L. Validation of reference genes for quantitative expression analysis by real-time RT-PCR in Saccharomyces cerevisiae. BMC Mol. Biol. 2009, 10, 99.
34. Brown, A.M. A step-by-step guide to non-linear regression analysis of experimental data using a Microsoft Excel spreadsheet. Comput. Methods Prog. Biomed. 2001, 65, 191-200.