메뉴 건너뛰기




Volumn 41, Issue 9, 2012, Pages 705-721

The sliding-helix voltage sensor: Mesoscale views of a robust structure-function relationship

Author keywords

Computer simulation; Ion channels; Potassium channels; Voltage gated; Voltage sensor domain

Indexed keywords

VOLTAGE GATED POTASSIUM CHANNEL;

EID: 84866552950     PISSN: 01757571     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00249-012-0847-z     Document Type: Article
Times cited : (12)

References (39)
  • 1
    • 61449172924 scopus 로고    scopus 로고
    • Conformational changes and slow dynamics through microsecond polarized atomistic molecular simulation of an integral kv1.2 ion channel
    • doi:10.1371/journal pcbi.1000289
    • Bjelkmar P, Niemela PS, Vattulainen I, Lindahl E (2009) Conformational changes and slow dynamics through microsecond polarized atomistic molecular simulation of an integral Kv1.2 ion channel PLoS Comput Biol 5(2):e1000289 doi:10.1371/journal pcbi.1000289
    • (2009) PLoS Comput Biol , vol.5 , Issue.2
    • Bjelkmar, P.1    Niemela, P.S.2    Vattulainen, I.3    Lindahl, E.4
  • 2
    • 33746275175 scopus 로고    scopus 로고
    • The effect of protein dielectric coefficient on the ionic selectivity of a calcium channel
    • doi: 10.1063/1.2212423
    • Boda D, Valiskó M, Eisenberg B, Nonner W, Henderson D, Gillespie D (2006) The effect of protein dielectric coefficient on the ionic selectivity of a calcium channel J Chem Phys 125(3):34901 doi: 10.1063/1.2212423
    • (2006) J Chem Phys , vol.125 , Issue.3 , pp. 34901
    • Boda, D.1    Valiskó, M.2    Eisenberg, B.3    Nonner, W.4    Henderson, D.5    Gillespie, D.6
  • 3
    • 34249946312 scopus 로고    scopus 로고
    • Two atomic constraints unambiguously position the s4 segment relative to s1 and s2 segments in the closed state of shaker k channel
    • doi101073/pnas0702638104
    • Campos FV, Chanda B, Roux B, Bezanilla F (2007) Two atomic constraints unambiguously position the S4 segment relative to S1 and S2 segments in the closed state of Shaker K channel Proc Natl Acad Sci U S A 104(19):7904-7909 doi:10.1073/pnas.070 2638104
    • (2007) Proc Natl Acad Sci U S A , vol.104 , Issue.19 , pp. 7904-7909
    • Campos, F.V.1    Chanda, B.2    Roux, B.3    Bezanilla, F.4
  • 4
    • 84859075891 scopus 로고    scopus 로고
    • Extracting dynamical equations from experimental data is np hard
    • doi:10.1103/PhysRevLett.108.120503
    • Cubitt TS, Eisert J, Wolf MM (2012) Extracting dynamical equations from experimental data is NP hard Phys Rev Lett 108:120503 doi:10.1103/PhysRevLett. 108.120503
    • (2012) Phys Rev Lett , vol.108 , pp. 120503
    • Cubitt, T.S.1    Eisert, J.2    Wolf, M.M.3
  • 5
    • 0020691096 scopus 로고
    • Lyotropic anions Na channel gating and ca electrode response
    • doi: 10.1085/jgp.81.2.255
    • Dani JA, Sanchez JA, Hille B (1983) Lyotropic anions Na channel gating and Ca electrode response J Gen Physiol 81:255-281 doi: 10.1085/jgp.81.2.255
    • (1983) J Gen Physiol , vol.81 , pp. 255-281
    • Dani, J.A.1    Sanchez, J.A.2    Hille, B.3
  • 6
    • 78349287755 scopus 로고    scopus 로고
    • Effect of sensor domain mutations on the properties of voltage-gated ion channels: Molecular dynamics studies of the potassium channel kv1.2
    • doi:10.1016/j.bpj.2010.08.069
    • Delemotte L, Treptow W, Klein ML, Tarek M (2010) Effect of sensor domain mutations on the properties of voltage-gated ion channels: molecular dynamics studies of the potassium channel Kv1.2 Biophys J 99(9):L72-L74 doi:10.1016/j.bpj.2010.08.069
    • (2010) Biophys J , vol.99 , Issue.9
    • Delemotte, L.1    Treptow, W.2    Klein, M.L.3    Tarek, M.4
  • 7
    • 79960450509 scopus 로고    scopus 로고
    • Onsager's variational principle in soft matter
    • Doi M (2011) Onsager's variational principle in soft matter J Phys Condens Matter 23(28):284118 http://stacks.iop.org/0953-8984/23/i=28/a=284118
    • (2011) J Phys Condens Matter , vol.23 , Issue.28 , pp. 284118
    • Doi, M.1
  • 8
    • 0032530716 scopus 로고    scopus 로고
    • Divalent cation effects on the shaker k channel suggest a pentapeptide sequence as determinant of functional surface charge density
    • doi101007/s002329900432
    • Elinder F, Liu Y, A ° rhem P (1998) Divalent cation effects on the Shaker K channel suggest a pentapeptide sequence as determinant of functional surface charge density J Membr Biol 165(2): 183-189 doi:10.1007/s002329900432
    • (1998) J Membr Biol , vol.165 , Issue.2 , pp. 183-189
    • Elinder, F.1    Liu, Y.2    Arhem, P.3
  • 9
    • 0034930982 scopus 로고    scopus 로고
    • S4 charges move close to residues in the pore domain during activation in a k channel
    • doi01085/jg11811-a
    • Elinder F, Mannikko R, Larsson HP (2001) S4 charges move close to residues in the pore domain during activation in a K channel J Gen Physiol 118(1):1-10 doi:0.1085/jgp.118.1.1-a
    • (2001) J Gen Physiol , vol.118 , Issue.1 , pp. 1-10
    • Elinder, F.1    Mannikko, R.2    Larsson, H.P.3
  • 10
    • 0032866866 scopus 로고    scopus 로고
    • Role of individual surface charges of voltage-gated k channels
    • doi 101016/S0006-1358-1362 doi34959976984
    • Elinder F, A ° rhem P (1999) Role of individual surface charges of voltage-gated K channels Biophys J 77(3):1358-1362 doi: 10.1016/S0006-3495(99) 76984-5
    • (1999) Biophys J , vol.77 , Issue.3 , pp. 1358-1362
    • Elinder, F.A.1    Rhem, P.2
  • 11
    • 84965086722 scopus 로고
    • The action of calcium on the electrical properties of squid axons
    • Frankenhaeuser B, Hodgkin AL (1957) The action of calcium on the electrical properties of squid axons J Physiol 137(2):218-244 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1362975
    • (1957) J Physiol , vol.137 , Issue.2 , pp. 218-244
    • Frankenhaeuser, B.1    Hodgkin, A.L.2
  • 12
    • 0036792837 scopus 로고    scopus 로고
    • Molecular models of voltage sensing
    • doi:10.1085/jgp.20028678
    • Gandhi CS, Isacoff EY (2002) Molecular models of voltage sensing J Gen Physiol 120:455-463 doi:10.1085/jgp.20028678
    • (2002) J Gen Physiol , vol.120 , pp. 455-463
    • Gandhi, C.S.1    Isacoff, E.Y.2
  • 13
    • 11144233948 scopus 로고    scopus 로고
    • A quantitative assessment of models for voltage-dependent gating of ion channels
    • doi101073/nas 0408116101
    • Grabe M, Lecar H, Jan YN, Jan LY (2004) A quantitative assessment of models for voltage-dependent gating of ion channels Proc Natl Acad Sci U S A 101(51):17640-17645 doi:10.1073/pnas 0408116101
    • (2004) Proc Natl Acad Sci U S A , vol.101 , Issue.51 , pp. 17640-17645
    • Grabe, M.1    Lecar, H.2    Jan, Y.N.3    Jan, L.Y.4
  • 14
    • 0035339382 scopus 로고    scopus 로고
    • Review of the shockley-ramo theorem and its application in semiconductor gamma-ray detectors
    • doi:10.1016/S0168-9002(01)00223-6
    • He Z (2001) Review of the Shockley-Ramo theorem and its application in semiconductor gamma-ray detectors Nucl Instr Meth A 463(1-2):250-267 doi:10.1016/S0168-9002(01)00223-6
    • (2001) Nucl Instr Meth A , vol.463 , Issue.1-2 , pp. 250-267
    • He, Z.1
  • 16
    • 35649001607 scopus 로고
    • A quantitative description of membrane current and its application to conduction and excitation in nerve
    • Hodgkin A, Huxley A (1952) A quantitative description of membrane current and its application to conduction and excitation in nerve J Physiol 117(4):500-544 http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1392413
    • (1952) J Physiol , vol.117 , Issue.4 , pp. 500-544
    • Hodgkin, A.1    Huxley, A.2
  • 17
    • 0035170817 scopus 로고    scopus 로고
    • Electrostatics and the gating pore of shaker potassium channels
    • doi 101085/jg117169
    • Islas LD, Sigworth FJ (2001) Electrostatics and the gating pore of Shaker potassium channels J Gen Physiol 117(1):69-90 doi: 10.1085/jgp.117.1.69
    • (2001) J Gen Physiol , vol.117 , Issue.1 , pp. 69-90
    • Islas, L.D.1    Sigworth, F.J.2
  • 19
    • 0038076054 scopus 로고    scopus 로고
    • X-ray structure of a voltage-dependent k? Channel
    • doi101038/nature01580
    • Jiang Y, Lee A, Chen J, Ruta V, Cadene M, Chait BT, MacKinnon R (2003) X-ray structure of a voltage-dependent K? channel Nature 423(6935):33-41 doi:10.1038/nature01580
    • (2003) Nature , vol.423 , Issue.6935 , pp. 33-41
    • Jiang, Y.1    Lee, A.2    Chen, J.3    Ruta, V.4    Cadene, M.5    Chait, B.T.6    MacKinnon, R.7
  • 20
    • 77952700991 scopus 로고    scopus 로고
    • Calculation of the gating charge for the kv1.2 voltage-activated potassium channel
    • doi:10.1016/j.bpj.2010.02.056
    • Khalili-Araghi F, Jogini V, Yarov-Yarovoy V, Tajkhorshid E, Roux B, Schulten K (2010) Calculation of the gating charge for the Kv1.2 voltage-activated potassium channel Biophys J 98(10): 2189-2198 doi:10.1016/j.bpj.2010.02.056
    • (2010) Biophys J , vol.98 , Issue.10 , pp. 2189-2198
    • Khalili-Araghi, F.1    Jogini, V.2    Yarov-Yarovoy, V.3    Tajkhorshid, E.4    Roux, B.5    Schulten, K.6
  • 21
    • 84855997898 scopus 로고    scopus 로고
    • Molecular dynamics investigation of the x-current in the kv1.2 voltage sensor domains
    • doi: 10.1016/j.bpj.2011.10.057
    • Khalili-Araghi F, Tajkhorshid E, Roux B, Schulten K (2012) Molecular dynamics investigation of the x-current in the Kv1.2 voltage sensor domains Biophys J 102(2):258-267 doi: 10.1016/j.bpj.2011.10.057
    • (2012) Biophys J , vol.102 , Issue.2 , pp. 258-267
    • Khalili-Araghi, F.1    Tajkhorshid, E.2    Roux, B.3    Schulten, K.4
  • 22
    • 0033681165 scopus 로고    scopus 로고
    • A conserved glutamate is important for slow inactivation in k? Channels
    • doi 101016/S0896-573-583 doi62730000067
    • Larsson HP, Elinder F (2000) A conserved glutamate is important for slow inactivation in K? channels Neuron 27(3):573-583 doi: 10.1016/S0896-6273(00) 00067-2
    • (2000) Neuron , vol.27 , Issue.3 , pp. 573-583
    • Larsson, H.P.1    Elinder, F.2
  • 23
    • 0242322531 scopus 로고    scopus 로고
    • Electrostatic model of s4 motion in voltage-gated ion channels
    • doi:10.1016/S0006-3495(03)74708-0
    • Lecar H, Larsson HP, Grabe M (2003) Electrostatic model of S4 motion in voltage-gated ion channels Biophys J 85(5):2854-2864 doi:10.1016/S0006-3495(03) 74708-0
    • (2003) Biophys J , vol.85 , Issue.5 , pp. 2854-2864
    • Lecar, H.1    Larsson, H.P.2    Grabe, M.3
  • 24
    • 23244456428 scopus 로고    scopus 로고
    • Crystal structure of a mammalian voltage-dependent shaker family k? Channel
    • doi101126/science1116269
    • Long SB, Campbell EB, MacKinnon R (2005a) Crystal structure of a mammalian voltage-dependent Shaker family K? channel Science 309(5736):897-903 doi:10.1126/science.1116269
    • (2005) Science , vol.309 , Issue.5736 , pp. 897-903
    • Long, S.B.1    Campbell, E.B.2    MacKinnon, R.3
  • 25
    • 23244441222 scopus 로고    scopus 로고
    • Voltage sensor of kv1.2: Structural basis of electromechanical coupling
    • doi101126/science1116270
    • Long SB, Campbell EB, MacKinnon R (2005b) Voltage sensor of Kv1.2: Structural basis of electromechanical coupling Science 309(5736):903-908 doi:10.1126/science.1116270
    • (2005) Science , vol.309 , Issue.5736 , pp. 903-908
    • Long, S.B.1    Campbell, E.B.2    MacKinnon, R.3
  • 26
    • 36248982122 scopus 로고    scopus 로고
    • Atomic structure of a voltage-dependent k? Channel in a lipid membrane-like environment
    • doi 101038/nature06265
    • Long SB, Tao X, Campbell EB, MacKinnon R (2007) Atomic structure of a voltage-dependent K? channel in a lipid membrane-like environment Nature 450(7168):376-382 doi: 10.1038/nature06265
    • (2007) Nature , vol.450 , Issue.7168 , pp. 376-382
    • Long, S.B.1    Tao, X.2    Campbell, E.B.3    MacKinnon, R.4
  • 28
    • 50349088433 scopus 로고    scopus 로고
    • Molecular dynamics simulation of kv channel voltage sensor helix in a lipid membrane with applied electric field
    • doi101529/biohysj108130658
    • Nishizawa M, Nishizawa K (2008) Molecular dynamics simulation of Kv channel voltage sensor helix in a lipid membrane with applied electric field Biophys J 95(4):1729-1744 doi:10.1529/biophysj.108.130658
    • (2008) Biophys J , vol.95 , Issue.4 , pp. 1729-1744
    • Nishizawa, M.1    Nishizawa, K.2
  • 29
    • 0028998041 scopus 로고
    • Electrostatic interactions of s4 voltage sensor in shaker k? Channel
    • doi101016/0896-1293-1301 do62739590276
    • Papazian DM, Shao XM, Seoh SA, Mock AF, Huang Y, Wainstock DH (1995) Electrostatic interactions of S4 voltage sensor in Shaker K? channel Neuron 14(6):1293-1301 doi:10.1016/0896-6273(95)90276-7
    • (1995) Neuron , vol.14 , Issue.6 , pp. 1293-1301
    • Papazian, D.M.1    Shao, X.M.2    Seoh, S.A.3    Mock, A.Z.4    Huang, Y.5    Wainstock, D.H.6
  • 31
    • 79960621367 scopus 로고    scopus 로고
    • The crystal structure of a voltage-gated sodium channel
    • doi:10.1038/nature10238
    • Payandeh J, Scheuer T, Zheng N, Catterall WA (2011) The crystal structure of a voltage-gated sodium channel Nature 475(7356): 353-358 doi:10.1038/nature10238
    • (2011) Nature , vol.475 , Issue.7356 , pp. 353-358
    • Payandeh, J.1    Scheuer, T.2    Zheng, N.3    Catterall, W.A.4
  • 32
    • 84863923658 scopus 로고    scopus 로고
    • Voltage sensing in ion channels: Mesoscale simulations of biological devices
    • doi:10.1103/PhysRevE.86 011910
    • Peyser A, Nonner W (2012) Voltage sensing in ion channels: Mesoscale simulations of biological devices Phys Rev E Stat Nonlin Soft Matter Phys 86:011910 doi:10.1103/PhysRevE.86 011910
    • (2012) Phys Rev E Stat Nonlin Soft Matter Phys , vol.86 , pp. 011910
    • Peyser, A.1    Nonner, W.2
  • 33
    • 33845637597 scopus 로고    scopus 로고
    • Phospholipids and the origin of cationic gating charges in voltage sensors
    • doi101038/nature05416
    • Schmidt D, Jiang QX, MacKinnon R (2006) Phospholipids and the origin of cationic gating charges in voltage sensors Nature 444(7120):775-779 doi:10.1038/nature05416
    • (2006) Nature , vol.444 , Issue.7120 , pp. 775-779
    • Schmidt, D.1    Jiang, Q.X.2    MacKinnon, R.3
  • 34
    • 77953578254 scopus 로고    scopus 로고
    • Downstate model of the voltage-sensing domain of a potassium channel
    • doi:10.1016/j.bpj.2010 03.031
    • Schow EV, Freites JA, Gogna K, White SH, Tobias DJ (2010) Downstate model of the voltage-sensing domain of a potassium channel Biophys J 98(12):2857-2866 doi:10.1016/j.bpj.2010 03.031
    • (2010) Biophys J , vol.98 , Issue.12 , pp. 2857-2866
    • Schow, E.V.1    Freites, J.A.2    Gogna, K.3    White, S.H.4    Tobias, D.J.5
  • 35
    • 0035451052 scopus 로고    scopus 로고
    • What are the dielectric "constants" of proteins and how to validate electrostatic models?
    • doi101002/rot1106
    • Schutz CN, Warshel A (2001) What are the dielectric "constants" of proteins and how to validate electrostatic models? Proteins 44(4):400-417 doi:10.1002/prot.1106
    • (2001) Proteins , vol.44 , Issue.4 , pp. 400-417
    • Schutz, C.N.1    Warshel, A.2
  • 36
    • 79953898210 scopus 로고    scopus 로고
    • 310-helix conformation facilitates the transition of a voltage sensor S4 segment toward the down state
    • doi:10.1016/j.bpj.2011.02.003
    • Schwaiger CS, Bjelkmar P, Hess B, Lindahl E (2011) 310-helix conformation facilitates the transition of a voltage sensor S4 segment toward the down state Biophys J 100(6):1446-1454 doi:10.1016/j.bpj.2011.02.003
    • (2011) Biophys J , vol.100 , Issue.6 , pp. 1446-1454
    • Schwaiger, C.S.1    Bjelkmar, P.2    Hess, B.3    Lindahl, E.4
  • 37
    • 0030175867 scopus 로고    scopus 로고
    • Voltage-sensing residues in the s2 and s4 segments of the shaker k? Channel
    • doi101016/S0896-1159-1167 doi62730080142
    • Seoh SA, Sigg D, Papazian DM, Bezanilla F (1996) Voltage-sensing residues in the S2 and S4 segments of the Shaker K? channel Neuron 16(6):1159-1167 doi:10.1016/S0896-6273(00)80142-7
    • (1996) Neuron , vol.16 , Issue.6 , pp. 1159-1167
    • Seoh, S.A.1    Sigg, D.2    Papazian, D.M.3    Bezanilla, F.4
  • 38
    • 77950488909 scopus 로고    scopus 로고
    • A gating charge transfer center in voltage sensors
    • doi:10.1126/science.1185954
    • Tao X, Lee A, Limapichat W, Dougherty DA, MacKinnon R (2010) A gating charge transfer center in voltage sensors Science 328(5974):67-73 doi:10.1126/science.1185954
    • (2010) Science , vol.328 , Issue.5974 , pp. 67-73
    • Tao, X.1    Lee, A.2    Limapichat, W.3    Dougherty, D.A.4    MacKinnon, R.5
  • 39
    • 33646550515 scopus 로고    scopus 로고
    • Voltage sensor conformations in the open and closed states in rosetta structural models of k? Channels
    • doi101073/nas0602350103
    • Yarov-Yarovoy V, Baker D, Catterall WA (2006) Voltage sensor conformations in the open and closed states in ROSETTA structural models of K? channels Proc Natl Acad Sci USA 103(19):7292-7297 doi:10.1073/pnas.0602350103
    • (2006) Proc Natl Acad Sci USA , vol.103 , Issue.19 , pp. 7292-7297
    • Yarov-Yarovoy, V.1    Baker, D.2    Catterall, W.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.