A FRET-facilitated photoswitching using an orange fluorescent protein with the fast photoconversion kinetics

Journal of the American Chemical Society

Volumn 134, Issue 36, 2012, Pages 14789-14799

  Subach, Oksana M ^a   Entenberg, David ^a   Condeelis, John S ^a   Verkhusha, Vladislav V ^a  

^a ALBERT EINSTEIN COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACTION SPECTRA; BLUE LIGHT; BLUE-SHIFTED; FLUORESCENT PROTEIN; HIGH DEMAND; LIGHT IRRADIATIONS; LIVE CELL; MAMMALIAN CELLS; MULTICOLOR IMAGING; PHOTO-STABILITY; PHOTO-SWITCHABLE; PHOTOCHEMICAL PROPERTIES; PHOTOCONVERSION; PHOTOSWITCHING; RESONANCE ENERGY TRANSFER; TRACK DYNAMICS; TWO PHOTON; TWO PHOTON IMAGING;

ENERGY TRANSFER; FLOW CYTOMETRY; FLUORESCENCE; PHOTONS;

PROTEINS;

FLUORESCENT DYE; GREEN FLUORESCENT PROTEIN; ORANGE FLUORESCENT PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; BASE PAIRING; BIOTRANSFORMATION; BLEACHING; BLUE LIGHT; DYNAMICS; FEMALE; FLOW CYTOMETRY; FLUORESCENCE ACTIVATED CELL SORTING; FLUORESCENCE RESONANCE ENERGY TRANSFER; HELA CELL; HUMAN; HUMAN CELL; LASER; MAMMAL CELL; MUTAGENESIS; PHOTOCHEMISTRY; PHOTON; POLYMERASE CHAIN REACTION; PROTEIN PROTEIN INTERACTION; PROTEIN PURIFICATION;

CELLS, CULTURED; FLUORESCENCE RESONANCE ENERGY TRANSFER; HELA CELLS; HUMANS; KINETICS; LUMINESCENT PROTEINS; MUTAGENESIS; PHOTOCHEMICAL PROCESSES;

EID: 84866419802     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja3034137     Document Type: Article

References (45)

1. Lippincott-Schwartz, J.; Patterson, G. H. Trends Cell Biol. 2009, 19, 555
2. Wu, B.; Piatkevich, K. D.; Lionnet, T.; Singer, R. H.; Verkhusha, V. V. Curr. Opin. Cell Biol. 2011, 23, 310
3. Chudakov, D. M.; Lukyanov, S.; Lukyanov, K. A. Nat. Protoc. 2007, 2, 2024
4. McKinney, S. A.; Murphy, C. S.; Hazelwood, K. L.; Davidson, M. W.; Looger, L. L. Nat. Methods 2009, 6, 131
5. Ando, R.; Hama, H.; Yamamoto-Hino, M.; Mizuno, H.; Miyawaki, A. Proc. Natl. Acad. Sci. U.S.A. 2002, 99, 12651
6. Habuchi, S.; Tsutsui, H.; Kochaniak, A. B.; Miyawaki, A.; van Oijen, A. M. PLoS One 2008, 3, e3944
7. Hoi, H.; Shaner, N. C.; Davidson, M. W.; Cairo, C. W.; Wang, J.; Campbell, R. E. J. Mol. Biol. 2010, 401, 776
8. Subach, O. M.; Patterson, G. H.; Ting, L. M.; Wang, Y.; Condeelis, J. S.; Verkhusha, V. V. Nat. Methods 2011, 8, 771
9. Drobizhev, M.; Makarov, N. S.; Tillo, S. E.; Hughes, T. E.; Rebane, A. Nat. Methods 2011, 8, 393
10. Ivanchenko, S.; Glaschick, S.; Rocker, C.; Oswald, F.; Wiedenmann, J.; Nienhaus, G. U. Biophys. J. 2007, 92, 4451
11. Schneider, M.; Barozzi, S.; Testa, I.; Faretta, M.; Diaspro, A. Biophys. J. 2005, 89, 1346
12. Tsutsui, H.; Karasawa, S.; Shimizu, H.; Nukina, N.; Miyawaki, A. EMBO Rep. 2005, 6, 233
13. Miyawaki, A. Nat. Rev. Mol. Cell Biol. 2011, 12, 656
14. Jares-Erijman, E. A.; Jovin, T. M. Nat. Biotechnol. 2003, 21, 1387
15. Miyawaki, A. Annu. Rev. Biochem. 2011, 80, 357
16. Souslova, E. A.; Chudakov, D. M. Microsc. Res. Tech. 2006, 69, 207
17. Subach, F. V.; Zhang, L.; Gadella, T. W.; Gurskaya, N. G.; Lukyanov, K. A.; Verkhusha, V. V. Chem. Biol. 2010, 17, 745
18. Mekler, V. M. Photochem. Photobiol. 1994, 59, 615
19. Mekler, V. M.; Averbakh, A. Z.; Sudarikov, A. B.; Kharitonova, O. V. J. Photochem. Photobiol., B 1997, 40, 278
20. Ho, S. N.; Hunt, H. D.; Horton, R. M.; Pullen, J. K.; Pease, L. R. Gene 1989, 77, 51
21. Subach, F. V.; Patterson, G. H.; Manley, S.; Gillette, J. M.; Lippincott-Schwartz, J.; Verkhusha, V. V. Nat. Methods 2009, 6, 153
22. Shaner, N. C.; Campbell, R. E.; Steinbach, P. A.; Giepmans, B. N.; Palmer, A. E.; Tsien, R. Y. Nat. Biotechnol. 2004, 22, 1567
23. Chudakov, D. M.; Verkhusha, V. V.; Staroverov, D. B.; Souslova, E. A.; Lukyanov, S.; Lukyanov, K. A. Nat. Biotechnol. 2004, 22, 1435
24. Lin, M. Z.; McKeown, M. R.; Ng, H. L.; Aguilera, T. A.; Shaner, N. C.; Campbell, R. E.; Adams, S. R.; Gross, L. A.; Ma, W.; Alber, T.; Tsien, R. Y. Chem. Biol. 2009, 16, 1169
25. Verkhusha, V. V.; Sorkin, A. Chem. Biol. 2005, 12, 279
26. Shtengel, G.; Galbraith, J. A.; Galbraith, C. G.; Lippincott-Schwartz, J.; Gillette, J. M.; Manley, S.; Sougrat, R.; Waterman, C. M.; Kanchanawong, P.; Davidson, M. W.; Fetter, R. D.; Hess, H. F. Proc. Natl. Acad. Sci. U.S.A. 2009, 106, 3125
27. Entenberg, D. E. A. Nat. Protoc. 2011, 6, 1500
28. Shu, X.; Shaner, N. C.; Yarbrough, C. A.; Tsien, R. Y.; Remington, S. J. Biochemistry 2006, 45, 9639
29. Drobizhev, M.; Tillo, S.; Makarov, N. S.; Hughes, T. E.; Rebane, A. J. Phys. Chem. B 2009, 113, 855
30. Chen, J.; Zheng, X. F.; Brown, E. J.; Schreiber, S. L. Proc. Natl. Acad. Sci. U.S.A. 1995, 92, 4947
31. Ho, S. N.; Biggar, S. R.; Spencer, D. M.; Schreiber, S. L.; Crabtree, G. R. Nature 1996, 382, 822
32. Rivera, V. M.; Clackson, T.; Natesan, S.; Pollock, R.; Amara, J. F.; Keenan, T.; Magari, S. R.; Phillips, T.; Courage, N. L.; Cerasoli, F., Jr.; Holt, D. A.; Gilman, M. Nat. Med. 1996, 2, 1028
33. Mootz, H. D.; Blum, E. S.; Tyszkiewicz, A. B.; Muir, T. W. J. Am. Chem. Soc. 2003, 125, 10561
34. Kohler, J. J.; Bertozzi, C. R. Chem. Biol. 2003, 10, 1303
35. Sorkin, A.; McClure, M.; Huang, F.; Carter, R. Curr. Biol. 2000, 10, 1395
36. Yamazaki, T.; Zaal, K.; Hailey, D.; Presley, J.; Lippincott-Schwartz, J.; Samelson, L. E. J. Cell Sci. 2002, 115, 1791
37. March's Advanced Organic Chemistry. Reactions, Mechanisms, and Structure; 6 th ed.; Smith, M. B.; March, J., Eds.; Wiley-Interscience, John Willey & Sons, Inc.: Hoboken, NJ, 2007.
38. Tsutsui, H.; Karasawa, S.; Shimizu, H.; Nukina, N.; Miyawaki, A. EMBO Rep. 2005, 6, 233
39. Piston, D. W.; Kremers, G. J. Trends Biochem. Sci. 2007, 32, 407
40. Gordon, G. W.; Berry, G.; Liang, X. H.; Levine, B.; Herman, B. Biophys. J. 1998, 74, 2702
41. Kenworthy, A. K.; Edidin, M. J. Cell Biol. 1998, 142, 69
42. Wouters, F. S.; Bastiaens, P. I.; Wirtz, K. W.; Jovin, T. M. EMBO J. 1998, 17, 7179
43. Gadella, T. W. J.; Jovin, T. M.; Clegg, R. M. Biophys. Chem. 1993, 48, 221
44. Lidke, D. S.; Nagy, P.; Barisas, B. G.; Heintzmann, R.; Post, J. N.; Lidke, K. A.; Clayton, A. H.; Arndt-Jovin, D. J.; Jovin, T. M. Biochem. Soc. Trans. 2003, 31, 1020
45. Shaner, N. C.; Steinbach, P. A.; Tsien, R. Y. Nat. Methods 2005, 2, 905