-
1
-
-
84879289081
-
Quantitative phenotype characterization of developing mouse brains by diffusion tensor imaging: application for the Frizzled-4-/- mutant mice
-
Aggarwal M., Ye X., et al. Quantitative phenotype characterization of developing mouse brains by diffusion tensor imaging: application for the Frizzled-4-/- mutant mice. Proceedings 17th Scientific Meeting, International Society for Magnetic Resonance in Medicine, Honolulu, HI 2009, 2009.
-
(2009)
Proceedings 17th Scientific Meeting, International Society for Magnetic Resonance in Medicine, Honolulu, HI
, pp. 2009
-
-
Aggarwal, M.1
Ye, X.2
-
2
-
-
67949103446
-
Magnetic resonance imaging and micro-computed tomography combined atlas of developing and adult mouse brains for stereotaxic surgery
-
Aggarwal M., Zhang J., et al. Magnetic resonance imaging and micro-computed tomography combined atlas of developing and adult mouse brains for stereotaxic surgery. Neuroscience 2009, 162(4):1339-1350.
-
(2009)
Neuroscience
, vol.162
, Issue.4
, pp. 1339-1350
-
-
Aggarwal, M.1
Zhang, J.2
-
3
-
-
84355163083
-
Probing mouse brain microstructure using oscillating gradient diffusion MRI
-
Aggarwal M., Jones M.V., et al. Probing mouse brain microstructure using oscillating gradient diffusion MRI. Magn. Reson. Med. 2012, 67(1):98-109.
-
(2012)
Magn. Reson. Med.
, vol.67
, Issue.1
, pp. 98-109
-
-
Aggarwal, M.1
Jones, M.V.2
-
4
-
-
23144451082
-
Automated segmentation of neuroanatomical structures in multispectral MR microscopy of the mouse brain
-
Ali A.A., Dale A.M., et al. Automated segmentation of neuroanatomical structures in multispectral MR microscopy of the mouse brain. NeuroImage 2005, 27(2):425-435.
-
(2005)
NeuroImage
, vol.27
, Issue.2
, pp. 425-435
-
-
Ali, A.A.1
Dale, A.M.2
-
5
-
-
64949185299
-
Multi-atlas based segmentation of brain images: atlas selection and its effect on accuracy
-
Aljabar P., Heckemann R.A., et al. Multi-atlas based segmentation of brain images: atlas selection and its effect on accuracy. NeuroImage 2009, 46(3):726-738.
-
(2009)
NeuroImage
, vol.46
, Issue.3
, pp. 726-738
-
-
Aljabar, P.1
Heckemann, R.A.2
-
6
-
-
0033933649
-
Voxel-based morphometry-the methods
-
Ashburner J., Friston K.J. Voxel-based morphometry-the methods. NeuroImage 2000, 11(6 Pt 1):805-821.
-
(2000)
NeuroImage
, vol.11
, Issue.6 PART 1
, pp. 805-821
-
-
Ashburner, J.1
Friston, K.J.2
-
7
-
-
55149110117
-
Multivariate analysis of structural and diffusion imaging in traumatic brain injury
-
Avants B., Duda J.T., et al. Multivariate analysis of structural and diffusion imaging in traumatic brain injury. Acad. Radiol. 2008, 15(11):1360-1375.
-
(2008)
Acad. Radiol.
, vol.15
, Issue.11
, pp. 1360-1375
-
-
Avants, B.1
Duda, J.T.2
-
8
-
-
38849187993
-
Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain
-
Avants B.B., Epstein C.L., et al. Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain. Med. Image Anal. 2008, 12(1):26-41.
-
(2008)
Med. Image Anal.
, vol.12
, Issue.1
, pp. 26-41
-
-
Avants, B.B.1
Epstein, C.L.2
-
9
-
-
78650181934
-
A reproducible evaluation of ANTs similarity metric performance in brain image registration
-
Avants B.B., Tustison N.J., et al. A reproducible evaluation of ANTs similarity metric performance in brain image registration. NeuroImage 2011, 54(3):2033-2044.
-
(2011)
NeuroImage
, vol.54
, Issue.3
, pp. 2033-2044
-
-
Avants, B.B.1
Tustison, N.J.2
-
10
-
-
84855903911
-
An open source multivariate framework for n-tissue segmentation with evaluation on public data
-
Avants B.B., Tustison N.J., et al. An open source multivariate framework for n-tissue segmentation with evaluation on public data. Neuroinformatics 2011, 9(4):381-400.
-
(2011)
Neuroinformatics
, vol.9
, Issue.4
, pp. 381-400
-
-
Avants, B.B.1
Tustison, N.J.2
-
11
-
-
34447533689
-
Morphometric analysis of the C57BL/6J mouse brain
-
Badea A., Ali-Sharief A.A., et al. Morphometric analysis of the C57BL/6J mouse brain. NeuroImage 2007, 37(3):683-693.
-
(2007)
NeuroImage
, vol.37
, Issue.3
, pp. 683-693
-
-
Badea, A.1
Ali-Sharief, A.A.2
-
12
-
-
33846620106
-
Neuroanatomical phenotypes in the reeler mouse
-
Badea A., Nicholls P.J., et al. Neuroanatomical phenotypes in the reeler mouse. NeuroImage 2007, 34(4):1363-1374.
-
(2007)
NeuroImage
, vol.34
, Issue.4
, pp. 1363-1374
-
-
Badea, A.1
Nicholls, P.J.2
-
13
-
-
62049085135
-
Genetic dissection of the mouse brain using high-field magnetic resonance microscopy
-
Badea A., Johnson G.A., et al. Genetic dissection of the mouse brain using high-field magnetic resonance microscopy. NeuroImage 2009, 45(4):1067-1079.
-
(2009)
NeuroImage
, vol.45
, Issue.4
, pp. 1067-1079
-
-
Badea, A.1
Johnson, G.A.2
-
14
-
-
77952314822
-
Remote sites of structural atrophy predict later amyloid formation in a mouse model of Alzheimer's disease
-
Badea A., Johnson G.A., et al. Remote sites of structural atrophy predict later amyloid formation in a mouse model of Alzheimer's disease. NeuroImage 2010, 50(2):416-427.
-
(2010)
NeuroImage
, vol.50
, Issue.2
, pp. 416-427
-
-
Badea, A.1
Johnson, G.A.2
-
15
-
-
84861699943
-
Atlas-based automatic mouse brain image segmentation revisited: model complexity vs. image registration
-
Bai J., Trinh T.L., et al. Atlas-based automatic mouse brain image segmentation revisited: model complexity vs. image registration. Magn. Reson. Imaging 2012, 30(6):789-798.
-
(2012)
Magn. Reson. Imaging
, vol.30
, Issue.6
, pp. 789-798
-
-
Bai, J.1
Trinh, T.L.2
-
16
-
-
5444276422
-
Computing Large Deformation Metric Mappings via Geodesic Flows of Diffeomorphisms
-
Beg M.F., Miller M.I., et al. Computing Large Deformation Metric Mappings via Geodesic Flows of Diffeomorphisms. Int. J. Comput. Vision 2005, 61(2):139-157.
-
(2005)
Int. J. Comput. Vision
, vol.61
, Issue.2
, pp. 139-157
-
-
Beg, M.F.1
Miller, M.I.2
-
17
-
-
84858060836
-
The pipeline system for Octave and Matlab (PSOM): a lightweight scripting framework and execution engine for scientific workflows
-
Bellec P., Lavoie-Courchesne S., et al. The pipeline system for Octave and Matlab (PSOM): a lightweight scripting framework and execution engine for scientific workflows. Front Neuroinformatics 2012, 6:7.
-
(2012)
Front Neuroinformatics
, vol.6
, pp. 7
-
-
Bellec, P.1
Lavoie-Courchesne, S.2
-
18
-
-
80052638721
-
Genotype specific age related changes in a transgenic rat model of Huntington's disease
-
Blockx I., Van Camp N., et al. Genotype specific age related changes in a transgenic rat model of Huntington's disease. NeuroImage 2011, 58(4):1006-1016.
-
(2011)
NeuroImage
, vol.58
, Issue.4
, pp. 1006-1016
-
-
Blockx, I.1
Van Camp, N.2
-
20
-
-
33646835211
-
In vivo magnetic resonance imaging and semiautomated image analysis extend the brain phenotype for cdf/cdf mice
-
Bock N.A., Kovacevic N., et al. In vivo magnetic resonance imaging and semiautomated image analysis extend the brain phenotype for cdf/cdf mice. J. Neurosci. 2006, 26(17):4455-4459.
-
(2006)
J. Neurosci.
, vol.26
, Issue.17
, pp. 4455-4459
-
-
Bock, N.A.1
Kovacevic, N.2
-
21
-
-
63549119962
-
A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale
-
Bohland J.W., Wu C., et al. A proposal for a coordinated effort for the determination of brainwide neuroanatomical connectivity in model organisms at a mesoscopic scale. PLoS Comput. Biol. 2009, 5(3):e1000334.
-
(2009)
PLoS Comput. Biol.
, vol.5
, Issue.3
-
-
Bohland, J.W.1
Wu, C.2
-
22
-
-
57049106701
-
Differential MRI patterns of brain atrophy in double or single transgenic mice for APP and/or SOD
-
Borg J., Chereul E. Differential MRI patterns of brain atrophy in double or single transgenic mice for APP and/or SOD. J. Neurosci. Res. 2008, 86(15):3275-3284.
-
(2008)
J. Neurosci. Res.
, vol.86
, Issue.15
, pp. 3275-3284
-
-
Borg, J.1
Chereul, E.2
-
23
-
-
79955950235
-
Natural history of disease in the YAC128 mouse reveals a discrete signature of pathology in Huntington disease
-
Carroll J.B., Lerch J.P., et al. Natural history of disease in the YAC128 mouse reveals a discrete signature of pathology in Huntington disease. Neurobiol. Dis. 2011, 43(1):257-265.
-
(2011)
Neurobiol. Dis.
, vol.43
, Issue.1
, pp. 257-265
-
-
Carroll, J.B.1
Lerch, J.P.2
-
24
-
-
79955466394
-
Structural MRI detects progressive regional brain atrophy and neuroprotective effects in N171-82Q Huntington's disease mouse model
-
Cheng Y., Peng Q., et al. Structural MRI detects progressive regional brain atrophy and neuroprotective effects in N171-82Q Huntington's disease mouse model. NeuroImage 2011, 56(3):1027-1034.
-
(2011)
NeuroImage
, vol.56
, Issue.3
, pp. 1027-1034
-
-
Cheng, Y.1
Peng, Q.2
-
25
-
-
77956094693
-
General multivariate linear modeling of surface shapes using SurfStat
-
Chung M.K., Worsley K.J., et al. General multivariate linear modeling of surface shapes using SurfStat. NeuroImage 2010, 53(2):491-505.
-
(2010)
NeuroImage
, vol.53
, Issue.2
, pp. 491-505
-
-
Chung, M.K.1
Worsley, K.J.2
-
26
-
-
84862256696
-
The BrainVISA project: a shared software development infrastructure for biomedical imaging research
-
Cointepas Y.T., Geffroy D., et al. The BrainVISA project: a shared software development infrastructure for biomedical imaging research. Proceedings 16th HBM 2010.
-
(2010)
Proceedings 16th HBM
-
-
Cointepas, Y.T.1
Geffroy, D.2
-
27
-
-
0032769093
-
Cortical surface-based analysis: I. segmentation and surface reconstruction
-
Dale A.M., Fischl B., et al. Cortical surface-based analysis: I. segmentation and surface reconstruction. NeuroImage 1999, 9(2):179-194.
-
(1999)
NeuroImage
, vol.9
, Issue.2
, pp. 179-194
-
-
Dale, A.M.1
Fischl, B.2
-
28
-
-
80355125352
-
Multiple-mouse neuroanatomical magnetic resonance imaging
-
Dazai J., Spring S., et al. Multiple-mouse neuroanatomical magnetic resonance imaging. J. Vis. Exp. 2011, 48.
-
(2011)
J. Vis. Exp.
, pp. 48
-
-
Dazai, J.1
Spring, S.2
-
29
-
-
33646173272
-
In vivo MRI and histological evaluation of brain atrophy in APP/PS1 transgenic mice
-
Delatour B., Guegan M., et al. In vivo MRI and histological evaluation of brain atrophy in APP/PS1 transgenic mice. Neurobiol. Aging 2006, 27(6):835-847.
-
(2006)
Neurobiol. Aging
, vol.27
, Issue.6
, pp. 835-847
-
-
Delatour, B.1
Guegan, M.2
-
30
-
-
0000250265
-
Measures of the amount of ecologic association between species
-
Dice L.R. Measures of the amount of ecologic association between species. Ecology 1945, 26(3):297-302.
-
(1945)
Ecology
, vol.26
, Issue.3
, pp. 297-302
-
-
Dice, L.R.1
-
31
-
-
77950520770
-
Efficient, distributed and interactive neuroimaging data analysis using the LONI pipeline
-
Dinov I., Van Horn J.D., et al. Efficient, distributed and interactive neuroimaging data analysis using the LONI pipeline. Front Neuroinformatics 2009, 3(22):1.
-
(2009)
Front Neuroinformatics
, vol.3
, Issue.22
, pp. 1
-
-
Dinov, I.1
Van Horn, J.D.2
-
32
-
-
0019826665
-
Establishment in culture of pluripotential cells from mouse embryos
-
Evans M.J., Kaufman M.H. Establishment in culture of pluripotential cells from mouse embryos. Nature 1981, 292(5819):154-156.
-
(1981)
Nature
, vol.292
, Issue.5819
, pp. 154-156
-
-
Evans, M.J.1
Kaufman, M.H.2
-
33
-
-
0032799993
-
Cortical surface-based analysis: II: inflation, flattening, and a surface-based coordinate system
-
Fischl B., Sereno M.I., et al. Cortical surface-based analysis: II: inflation, flattening, and a surface-based coordinate system. NeuroImage 1999, 9(2):195-207.
-
(1999)
NeuroImage
, vol.9
, Issue.2
, pp. 195-207
-
-
Fischl, B.1
Sereno, M.I.2
-
34
-
-
18244406829
-
Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain
-
Fischl B., Salat D.H., et al. Whole brain segmentation: automated labeling of neuroanatomical structures in the human brain. Neuron 2002, 33(3):341-355.
-
(2002)
Neuron
, vol.33
, Issue.3
, pp. 341-355
-
-
Fischl, B.1
Salat, D.H.2
-
35
-
-
79551556509
-
Relationships between gene expression and brain wiring in the adult rodent brain
-
French L., Pavlidis P. Relationships between gene expression and brain wiring in the adult rodent brain. PLoS Comput. Biol. 2011, 7(1):e1001049.
-
(2011)
PLoS Comput. Biol.
, vol.7
, Issue.1
-
-
French, L.1
Pavlidis, P.2
-
36
-
-
4344705249
-
Statistical parametric maps in functional imaging: a general linear approach
-
Friston K.J., Holmes A.P., et al. Statistical parametric maps in functional imaging: a general linear approach. Hum. Brain Mapp. 1994, 2(4):189-210.
-
(1994)
Hum. Brain Mapp.
, vol.2
, Issue.4
, pp. 189-210
-
-
Friston, K.J.1
Holmes, A.P.2
-
37
-
-
84860859564
-
Modeling human neurodegenerative diseases in transgenic systems
-
Gama Sosa M.A., De Gasperi R., et al. Modeling human neurodegenerative diseases in transgenic systems. Hum. Genet. 2012, 131(4):535-563.
-
(2012)
Hum. Genet.
, vol.131
, Issue.4
, pp. 535-563
-
-
Gama Sosa, M.A.1
De Gasperi, R.2
-
38
-
-
77954951736
-
Alterations in multiple measures of white matter integrity in normal women at high risk for Alzheimer's disease
-
Gold B.T., Powell D.K., et al. Alterations in multiple measures of white matter integrity in normal women at high risk for Alzheimer's disease. NeuroImage 2010, 52(4):1487-1494.
-
(2010)
NeuroImage
, vol.52
, Issue.4
, pp. 1487-1494
-
-
Gold, B.T.1
Powell, D.K.2
-
39
-
-
84994026358
-
Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python
-
Gorgolewski K., Burns C.D., et al. Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in Python. Front Neuroimformatics 2011, 5:13.
-
(2011)
Front Neuroimformatics
, vol.5
, pp. 13
-
-
Gorgolewski, K.1
Burns, C.D.2
-
40
-
-
0031283422
-
Markov random field segmentation of brain MR images
-
Held K., Rota Kops E., et al. Markov random field segmentation of brain MR images. IEEE Trans. Med. Imaging 1997, 16(6):878-886.
-
(1997)
IEEE Trans. Med. Imaging
, vol.16
, Issue.6
, pp. 878-886
-
-
Held, K.1
Rota Kops, E.2
-
42
-
-
29644440011
-
Persistent amyloidosis following suppression of Abeta production in a transgenic model of Alzheimer disease
-
Jankowsky J.L., Slunt H.H., et al. Persistent amyloidosis following suppression of Abeta production in a transgenic model of Alzheimer disease. PLoS Med. 2005, 2(12):e355.
-
(2005)
PLoS Med.
, vol.2
, Issue.12
-
-
Jankowsky, J.L.1
Slunt, H.H.2
-
43
-
-
77952305380
-
Microscopic diffusion tensor imaging of the mouse brain
-
Jiang Y., Johnson G.A. Microscopic diffusion tensor imaging of the mouse brain. NeuroImage 2010, 50(2):465-471.
-
(2010)
NeuroImage
, vol.50
, Issue.2
, pp. 465-471
-
-
Jiang, Y.1
Johnson, G.A.2
-
44
-
-
79955466314
-
Microscopic diffusion tensor atlas of the mouse brain
-
Jiang Y., Johnson G.A. Microscopic diffusion tensor atlas of the mouse brain. NeuroImage 2011, 56(3):1235-1243.
-
(2011)
NeuroImage
, vol.56
, Issue.3
, pp. 1235-1243
-
-
Jiang, Y.1
Johnson, G.A.2
-
45
-
-
31344441424
-
DTIStudio: resource program for diffusion tensor computation and fiber bundle tracking
-
Jiang H., van Zijl P.C., et al. DTIStudio: resource program for diffusion tensor computation and fiber bundle tracking. Comput. Methods Programs Biomed. 2006, 81(2):106-116.
-
(2006)
Comput. Methods Programs Biomed.
, vol.81
, Issue.2
, pp. 106-116
-
-
Jiang, H.1
van Zijl, P.C.2
-
46
-
-
0036189843
-
Morphologic phenotyping with MR microscopy: the visible mouse
-
Johnson G.A., Cofer G.P., et al. Morphologic phenotyping with MR microscopy: the visible mouse. Radiology 2002, 222(3):789-793.
-
(2002)
Radiology
, vol.222
, Issue.3
, pp. 789-793
-
-
Johnson, G.A.1
Cofer, G.P.2
-
47
-
-
34447577998
-
High-throughput morphologic phenotyping of the mouse brain with magnetic resonance histology
-
Johnson G.A., Ali-Sharief A., et al. High-throughput morphologic phenotyping of the mouse brain with magnetic resonance histology. NeuroImage 2007, 37(1):82-89.
-
(2007)
NeuroImage
, vol.37
, Issue.1
, pp. 82-89
-
-
Johnson, G.A.1
Ali-Sharief, A.2
-
48
-
-
77956061614
-
Waxholm space: an image-based reference for coordinating mouse brain research
-
Johnson G.A., Badea A., et al. Waxholm space: an image-based reference for coordinating mouse brain research. NeuroImage 2010, 53(2):365-372.
-
(2010)
NeuroImage
, vol.53
, Issue.2
, pp. 365-372
-
-
Johnson, G.A.1
Badea, A.2
-
49
-
-
17744394309
-
A three-dimensional MRI atlas of the mouse brain with estimates of the average and variability
-
Kovacevic N., Henderson J.T., et al. A three-dimensional MRI atlas of the mouse brain with estimates of the average and variability. Cereb. Cortex 2005, 15(5):639-645.
-
(2005)
Cereb. Cortex
, vol.15
, Issue.5
, pp. 639-645
-
-
Kovacevic, N.1
Henderson, J.T.2
-
51
-
-
45849094758
-
Longitudinal neuroanatomical changes determined by deformation-based morphometry in a mouse model of Alzheimer's disease
-
Lau J.C., Lerch J.P., et al. Longitudinal neuroanatomical changes determined by deformation-based morphometry in a mouse model of Alzheimer's disease. NeuroImage 2008, 42(1):19-27.
-
(2008)
NeuroImage
, vol.42
, Issue.1
, pp. 19-27
-
-
Lau, J.C.1
Lerch, J.P.2
-
52
-
-
77952419555
-
Validation of MRI-based 3D digital atlas registration with histological and autoradiographic volumes: an anatomofunctional transgenic mouse brain imaging study
-
Lebenberg J., Herard A.S., et al. Validation of MRI-based 3D digital atlas registration with histological and autoradiographic volumes: an anatomofunctional transgenic mouse brain imaging study. NeuroImage 2010, 51(3):1037-1046.
-
(2010)
NeuroImage
, vol.51
, Issue.3
, pp. 1037-1046
-
-
Lebenberg, J.1
Herard, A.S.2
-
53
-
-
71649096604
-
Evaluation of atlas based mouse brain segmentation
-
Lee J., Jomier J., et al. Evaluation of atlas based mouse brain segmentation. Proc. SPIE 2009, 7259:725943-725949.
-
(2009)
Proc. SPIE
, vol.7259
, pp. 725943-725949
-
-
Lee, J.1
Jomier, J.2
-
54
-
-
36048971978
-
Automated deformation analysis in the YAC128 Huntington disease mouse model
-
Lerch J.P., Carroll J.B., et al. Automated deformation analysis in the YAC128 Huntington disease mouse model. NeuroImage 2008, 39(1):32-39.
-
(2008)
NeuroImage
, vol.39
, Issue.1
, pp. 32-39
-
-
Lerch, J.P.1
Carroll, J.B.2
-
55
-
-
78650283593
-
Maze training in mice induces MRI-detectable brain shape changes specific to the type of learning
-
Lerch J.P., Yiu A.P., et al. Maze training in mice induces MRI-detectable brain shape changes specific to the type of learning. NeuroImage 2011, 54(3):2086-2095.
-
(2011)
NeuroImage
, vol.54
, Issue.3
, pp. 2086-2095
-
-
Lerch, J.P.1
Yiu, A.P.2
-
56
-
-
26244449786
-
A three-dimensional digital atlas database of the adult C57BL/6J mouse brain by magnetic resonance microscopy
-
Ma Y., Hof P.R., et al. A three-dimensional digital atlas database of the adult C57BL/6J mouse brain by magnetic resonance microscopy. Neuroscience 2005, 135(4):1203-1215.
-
(2005)
Neuroscience
, vol.135
, Issue.4
, pp. 1203-1215
-
-
Ma, Y.1
Hof, P.R.2
-
57
-
-
67249130006
-
In vivo 3D digital atlas database of the adult C57BL/6J mouse brain by magnetic resonance microscopy
-
Ma Y., Smith D., et al. In vivo 3D digital atlas database of the adult C57BL/6J mouse brain by magnetic resonance microscopy. Front. Neuroanat. 2008, 2:1.
-
(2008)
Front. Neuroanat.
, vol.2
, pp. 1
-
-
Ma, Y.1
Smith, D.2
-
58
-
-
10744223881
-
A multimodal, multidimensional atlas of the C57BL/6J mouse brain
-
MacKenzie-Graham A., Lee E.F., et al. A multimodal, multidimensional atlas of the C57BL/6J mouse brain. J. Anat. 2004, 204(2):93-102.
-
(2004)
J. Anat.
, vol.204
, Issue.2
, pp. 93-102
-
-
MacKenzie-Graham, A.1
Lee, E.F.2
-
59
-
-
33747802703
-
Cerebellar cortical atrophy in experimental autoimmune encephalomyelitis
-
MacKenzie-Graham A., Tinsley M.R., et al. Cerebellar cortical atrophy in experimental autoimmune encephalomyelitis. NeuroImage 2006, 32(3):1016-1023.
-
(2006)
NeuroImage
, vol.32
, Issue.3
, pp. 1016-1023
-
-
MacKenzie-Graham, A.1
Tinsley, M.R.2
-
60
-
-
84855992573
-
Cortical atrophy in experimental autoimmune encephalomyelitis: in vivo imaging
-
Mackenzie-Graham A., Rinek G.A., et al. Cortical atrophy in experimental autoimmune encephalomyelitis: in vivo imaging. NeuroImage 2012, 60(1):95-104.
-
(2012)
NeuroImage
, vol.60
, Issue.1
, pp. 95-104
-
-
Mackenzie-Graham, A.1
Rinek, G.A.2
-
61
-
-
57649242659
-
Analysis of serial magnetic resonance images of mouse brains using image registration
-
Maheswaran S., Barjat H., et al. Analysis of serial magnetic resonance images of mouse brains using image registration. NeuroImage 2009, 44(3):692-700.
-
(2009)
NeuroImage
, vol.44
, Issue.3
, pp. 692-700
-
-
Maheswaran, S.1
Barjat, H.2
-
62
-
-
67349251602
-
Longitudinal regional brain volume changes quantified in normal aging and Alzheimer's APP×PS1 mice using MRI
-
Maheswaran S., Barjat H., et al. Longitudinal regional brain volume changes quantified in normal aging and Alzheimer's APP×PS1 mice using MRI. Brain Res. 2009, 1270:19-32.
-
(2009)
Brain Res.
, vol.1270
, pp. 19-32
-
-
Maheswaran, S.1
Barjat, H.2
-
63
-
-
84883786634
-
Performing label-fusion-based segmentation using multiple automatically generated templates
-
Mallar Chakravarty M., Steadman P., et al. Performing label-fusion-based segmentation using multiple automatically generated templates. Hum. Brain Mapp. 2012.
-
(2012)
Hum. Brain Mapp.
-
-
Mallar Chakravarty, M.1
Steadman, P.2
-
64
-
-
79957974368
-
Magnetic resonance imaging determinants of intraindividual variability in the elderly: combined analysis of grey and white matter
-
Moy G., Millet P., et al. Magnetic resonance imaging determinants of intraindividual variability in the elderly: combined analysis of grey and white matter. Neuroscience 2011, 186:88-93.
-
(2011)
Neuroscience
, vol.186
, pp. 88-93
-
-
Moy, G.1
Millet, P.2
-
65
-
-
60749125717
-
An anatomic gene expression atlas of the adult mouse brain
-
Ng L., Bernard A., et al. An anatomic gene expression atlas of the adult mouse brain. Nat. Neurosci. 2009, 12(3):356-362.
-
(2009)
Nat. Neurosci.
, vol.12
, Issue.3
, pp. 356-362
-
-
Ng, L.1
Bernard, A.2
-
66
-
-
79954610221
-
Modeling autistic features in animals
-
Patterson P.H. Modeling autistic features in animals. Pediatr. Res. 2011, 69(5 Pt 2):34R-40R.
-
(2011)
Pediatr. Res.
, vol.69
, Issue.5 PART 2
-
-
Patterson, P.H.1
-
67
-
-
25444501564
-
A new set of BXD recombinant inbred lines from advanced intercross populations in mice
-
Peirce J.L., Lu L., et al. A new set of BXD recombinant inbred lines from advanced intercross populations in mice. BMC Genet. 2004, 5:7.
-
(2004)
BMC Genet.
, vol.5
, pp. 7
-
-
Peirce, J.L.1
Lu, L.2
-
68
-
-
0042745638
-
The LONI pipeline processing environment
-
Rex D.E., Ma J.Q., et al. The LONI pipeline processing environment. NeuroImage 2003, 19(3):1033-1048.
-
(2003)
NeuroImage
, vol.19
, Issue.3
, pp. 1033-1048
-
-
Rex, D.E.1
Ma, J.Q.2
-
69
-
-
57449107357
-
Voxel-based morphometry in the R6/2 transgenic mouse reveals differences between genotypes not seen with manual 2D morphometry
-
Sawiak S.J., Wood N.I., et al. Voxel-based morphometry in the R6/2 transgenic mouse reveals differences between genotypes not seen with manual 2D morphometry. Neurobiol. Dis. 2009, 33(1):20-27.
-
(2009)
Neurobiol. Dis.
, vol.33
, Issue.1
, pp. 20-27
-
-
Sawiak, S.J.1
Wood, N.I.2
-
70
-
-
66449084990
-
Automated segmentation of in vivo and ex vivo mouse brain magnetic resonance images
-
Scheenstra A.E., van de Ven R.C., et al. Automated segmentation of in vivo and ex vivo mouse brain magnetic resonance images. Mol. Imaging 2009, 8(1):35-44.
-
(2009)
Mol. Imaging
, vol.8
, Issue.1
, pp. 35-44
-
-
Scheenstra, A.E.1
van de Ven, R.C.2
-
71
-
-
33749176256
-
Enhanced T2 contrast for MR histology of the mouse brain
-
Sharief A.A., Johnson G.A. Enhanced T2 contrast for MR histology of the mouse brain. Magn. Reson. Med. 2006, 56(4):717-725.
-
(2006)
Magn. Reson. Med.
, vol.56
, Issue.4
, pp. 717-725
-
-
Sharief, A.A.1
Johnson, G.A.2
-
72
-
-
36049017075
-
Automated segmentation of the actively stained mouse brain using multi-spectral MR microscopy
-
Sharief A.A., Badea A., et al. Automated segmentation of the actively stained mouse brain using multi-spectral MR microscopy. NeuroImage 2008, 39(1):136-145.
-
(2008)
NeuroImage
, vol.39
, Issue.1
, pp. 136-145
-
-
Sharief, A.A.1
Badea, A.2
-
73
-
-
0031987382
-
A nonparametric method for automatic correction of intensity nonuniformity in MRI data
-
Sled J.G., Zijdenbos A.P., et al. A nonparametric method for automatic correction of intensity nonuniformity in MRI data. IEEE Trans. Med. Imaging 1998, 17(1):87-97.
-
(1998)
IEEE Trans. Med. Imaging
, vol.17
, Issue.1
, pp. 87-97
-
-
Sled, J.G.1
Zijdenbos, A.P.2
-
74
-
-
33745188219
-
Tract-based spatial statistics: voxelwise analysis of multi-subject diffusion data
-
Smith S.M., Jenkinson M., et al. Tract-based spatial statistics: voxelwise analysis of multi-subject diffusion data. NeuroImage 2006, 31(4):1487-1505.
-
(2006)
NeuroImage
, vol.31
, Issue.4
, pp. 1487-1505
-
-
Smith, S.M.1
Jenkinson, M.2
-
75
-
-
0022389290
-
Insertion of DNA sequences into the human chromosomal beta-globin locus by homologous recombination
-
Smithies O., Gregg R.G., et al. Insertion of DNA sequences into the human chromosomal beta-globin locus by homologous recombination. Nature 1985, 317(6034):230-234.
-
(1985)
Nature
, vol.317
, Issue.6034
, pp. 230-234
-
-
Smithies, O.1
Gregg, R.G.2
-
76
-
-
79954516559
-
The human connectome: a complex network
-
Sporns O. The human connectome: a complex network. Ann. N. Y. Acad. Sci. 2011, 1224:109-125.
-
(2011)
Ann. N. Y. Acad. Sci.
, vol.1224
, pp. 109-125
-
-
Sporns, O.1
-
77
-
-
0000731250
-
Recombinant inbred strains: use in gene mapping
-
Academic Press, New York
-
Taylor B. Recombinant inbred strains: use in gene mapping. Origins of Inbred Mice 1978, Academic Press, New York.
-
(1978)
Origins of Inbred Mice
-
-
Taylor, B.1
-
78
-
-
0023646810
-
Site-directed mutagenesis by gene targeting in mouse embryo-derived stem cells
-
Thomas K.R., Capecchi M.R. Site-directed mutagenesis by gene targeting in mouse embryo-derived stem cells. Cell 1987, 51(3):503-512.
-
(1987)
Cell
, vol.51
, Issue.3
, pp. 503-512
-
-
Thomas, K.R.1
Capecchi, M.R.2
-
80
-
-
41649091676
-
Brain anatomical structure segmentation by hybrid discriminative/generative models
-
Tu Z., Narr K., et al. Brain anatomical structure segmentation by hybrid discriminative/generative models. IEEE Trans. Med. Imaging 2008, 27(4):495-508.
-
(2008)
IEEE Trans. Med. Imaging
, vol.27
, Issue.4
, pp. 495-508
-
-
Tu, Z.1
Narr, K.2
-
81
-
-
77953171016
-
N4ITK: improved N3 bias correction
-
Tustison N.J., Avants B.B., et al. N4ITK: improved N3 bias correction. IEEE Trans. Med. Imaging 2010, 29(6):1310-1320.
-
(2010)
IEEE Trans. Med. Imaging
, vol.29
, Issue.6
, pp. 1310-1320
-
-
Tustison, N.J.1
Avants, B.B.2
-
82
-
-
84862993537
-
The future of the human connectome
-
Van Essen D.C., Ugurbil K. The future of the human connectome. Neuroimage 2012, 62(2):1299-1310.
-
(2012)
Neuroimage
, vol.62
, Issue.2
, pp. 1299-1310
-
-
Van Essen, D.C.1
Ugurbil, K.2
-
83
-
-
0031910991
-
Automated image registration: I. General methods and intrasubject, intramodality validation
-
Woods R.P., Grafton S.T., et al. Automated image registration: I. General methods and intrasubject, intramodality validation. J. Comput. Assist. Tomogr. 1998, 22(1):139-152.
-
(1998)
J. Comput. Assist. Tomogr.
, vol.22
, Issue.1
, pp. 139-152
-
-
Woods, R.P.1
Grafton, S.T.2
-
84
-
-
77249141905
-
SurfStat: a Matlab toolbox for the statistical analysis of univariate and multivariate surface and volumetric data using linear mixed effects models and random field theory
-
Worsley K.J., Taylor J.E., et al. SurfStat: a Matlab toolbox for the statistical analysis of univariate and multivariate surface and volumetric data using linear mixed effects models and random field theory. NeuroImage 2009, 47(Supplement 1(0)):S102.
-
(2009)
NeuroImage
, vol.47
, Issue.SUPPL. 1 0
-
-
Worsley, K.J.1
Taylor, J.E.2
-
85
-
-
84855439188
-
A prior feature SVM-MRF based method for mouse brain segmentation
-
Wu T., Bae M.H., et al. A prior feature SVM-MRF based method for mouse brain segmentation. NeuroImage 2012, 59(3):2298-2306.
-
(2012)
NeuroImage
, vol.59
, Issue.3
, pp. 2298-2306
-
-
Wu, T.1
Bae, M.H.2
-
86
-
-
84859375053
-
Characterizing the regional structural difference of the brain between tau transgenic (rTg4510) and wild-type mice using MRI
-
Xie Z., Yang D., et al. Characterizing the regional structural difference of the brain between tau transgenic (rTg4510) and wild-type mice using MRI. Med. Image Comput. Comput. Assist. Interv. 2010, 13(Pt 1):308-315.
-
(2010)
Med. Image Comput. Comput. Assist. Interv.
, vol.13
, Issue.PART 1
, pp. 308-315
-
-
Xie, Z.1
Yang, D.2
-
87
-
-
33744930583
-
User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability
-
Yushkevich P.A., Piven J., et al. User-guided 3D active contour segmentation of anatomical structures: significantly improved efficiency and reliability. NeuroImage 2006, 31(3):1116-1128.
-
(2006)
NeuroImage
, vol.31
, Issue.3
, pp. 1116-1128
-
-
Yushkevich, P.A.1
Piven, J.2
-
88
-
-
77958074657
-
Mouse embryonic phenotyping by morphometric analysis of MR images
-
Zamyadi M., Baghdadi L., et al. Mouse embryonic phenotyping by morphometric analysis of MR images. Physiol. Genomics 2010, 42A(2):89-95.
-
(2010)
Physiol. Genomics
, vol.42 A
, Issue.2
, pp. 89-95
-
-
Zamyadi, M.1
Baghdadi, L.2
-
89
-
-
71849109192
-
Longitudinal characterization of brain atrophy of a Huntington's disease mouse model by automated morphological analyses of magnetic resonance images
-
Zhang J., Peng Q., et al. Longitudinal characterization of brain atrophy of a Huntington's disease mouse model by automated morphological analyses of magnetic resonance images. NeuroImage 2010, 49(3):2340-2351.
-
(2010)
NeuroImage
, vol.49
, Issue.3
, pp. 2340-2351
-
-
Zhang, J.1
Peng, Q.2
-
90
-
-
77955285865
-
Increased anatomical detail by in vitro MR microscopy with a modified Golgi impregnation method
-
Zhang X., Bearer E.L., et al. Increased anatomical detail by in vitro MR microscopy with a modified Golgi impregnation method. Magn. Reson. Med. 2010, 63(5):1391-1397.
-
(2010)
Magn. Reson. Med.
, vol.63
, Issue.5
, pp. 1391-1397
-
-
Zhang, X.1
Bearer, E.L.2
-
91
-
-
68049087640
-
Improvement of brain segmentation accuracy by optimizing non-uniformity correction using N3
-
Zheng W., Chee M.W., et al. Improvement of brain segmentation accuracy by optimizing non-uniformity correction using N3. NeuroImage 2009, 48(1):73-83.
-
(2009)
NeuroImage
, vol.48
, Issue.1
, pp. 73-83
-
-
Zheng, W.1
Chee, M.W.2
-
92
-
-
0036826508
-
Automatic "pipeline" analysis of 3-D MRI data for clinical trials: application to multiple sclerosis
-
Zijdenbos A.P., Forghani R., et al. Automatic "pipeline" analysis of 3-D MRI data for clinical trials: application to multiple sclerosis. IEEE Trans. Med. Imaging 2002, 21(10):1280-1291.
-
(2002)
IEEE Trans. Med. Imaging
, vol.21
, Issue.10
, pp. 1280-1291
-
-
Zijdenbos, A.P.1
Forghani, R.2
|