-
1
-
-
5044234835
-
Amyotrophic lateral sclerosis: diffusion tensor tractography and voxel-based analysis
-
Abe O., Yamada H., Masutani Y., Aoki S., Kunimatsu A., Yamasue H., Fukuda R., Kasai K., Hayashi N., Masumoto T., Mori H., Soma T., Ohtomo K. Amyotrophic lateral sclerosis: diffusion tensor tractography and voxel-based analysis. NMR Biomed. 2004, 17:411-416.
-
(2004)
NMR Biomed.
, vol.17
, pp. 411-416
-
-
Abe, O.1
Yamada, H.2
Masutani, Y.3
Aoki, S.4
Kunimatsu, A.5
Yamasue, H.6
Fukuda, R.7
Kasai, K.8
Hayashi, N.9
Masumoto, T.10
Mori, H.11
Soma, T.12
Ohtomo, K.13
-
2
-
-
67949103446
-
Magnetic resonance imaging and micro-computed tomography combined atlas of developing and adult mouse brains for stereotaxic surgery
-
Aggarwal M., Zhang J., Miller M.I., Sidman R.L., Mori S. Magnetic resonance imaging and micro-computed tomography combined atlas of developing and adult mouse brains for stereotaxic surgery. Neuroscience 2009, 162:1339-1350.
-
(2009)
Neuroscience
, vol.162
, pp. 1339-1350
-
-
Aggarwal, M.1
Zhang, J.2
Miller, M.I.3
Sidman, R.L.4
Mori, S.5
-
3
-
-
77953927188
-
Three-dimensional diffusion tensor microimaging for anatomical characterization of the mouse brain
-
Aggarwal M., Mori S., Shimogori T., Blackshaw S., Zhang J. Three-dimensional diffusion tensor microimaging for anatomical characterization of the mouse brain. Magn. Reson. Med. 2010, 64:249-261.
-
(2010)
Magn. Reson. Med.
, vol.64
, pp. 249-261
-
-
Aggarwal, M.1
Mori, S.2
Shimogori, T.3
Blackshaw, S.4
Zhang, J.5
-
4
-
-
0035498039
-
Spatial transformations of diffusion tensor magnetic resonance images
-
Alexander D.C., Pierpaoli C., Basser P.J., Gee J.C. Spatial transformations of diffusion tensor magnetic resonance images. IEEE Trans. Med. Imaging 2001, 20:1131-1139.
-
(2001)
IEEE Trans. Med. Imaging
, vol.20
, pp. 1131-1139
-
-
Alexander, D.C.1
Pierpaoli, C.2
Basser, P.J.3
Gee, J.C.4
-
5
-
-
34447533689
-
Morphometric analysis of the C57BL/6J mouse brain
-
Badea A., Ali-Sharief A.A., Johnson G.A. Morphometric analysis of the C57BL/6J mouse brain. Neuroimage 2007, 37:683-693.
-
(2007)
Neuroimage
, vol.37
, pp. 683-693
-
-
Badea, A.1
Ali-Sharief, A.A.2
Johnson, G.A.3
-
6
-
-
62049085135
-
Genetic dissection of the mouse brain using high-field magnetic resonance microscopy
-
Badea A., Johnson G.A., Williams R.W. Genetic dissection of the mouse brain using high-field magnetic resonance microscopy. Neuroimage 2009, 45:1067-1079.
-
(2009)
Neuroimage
, vol.45
, pp. 1067-1079
-
-
Badea, A.1
Johnson, G.A.2
Williams, R.W.3
-
7
-
-
0035871424
-
Three-dimensional digital mouse atlas using high-resolution MRI
-
Dhenain M., Ruffins S.W., Jacobs R.E. Three-dimensional digital mouse atlas using high-resolution MRI. Dev. Biol. 2001, 232:458-470.
-
(2001)
Dev. Biol.
, vol.232
, pp. 458-470
-
-
Dhenain, M.1
Ruffins, S.W.2
Jacobs, R.E.3
-
8
-
-
45849093291
-
High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice
-
Dorr A.E., Lerch J.P., Spring S., Kabani N., Henkelman R.M. High resolution three-dimensional brain atlas using an average magnetic resonance image of 40 adult C57Bl/6J mice. Neuroimage 2008, 42:60-69.
-
(2008)
Neuroimage
, vol.42
, pp. 60-69
-
-
Dorr, A.E.1
Lerch, J.P.2
Spring, S.3
Kabani, N.4
Henkelman, R.M.5
-
9
-
-
29744449088
-
Occipital-callosal Pathways in Children - Validation and Atlas Development
-
J.L. Ulmer, L. Parsons, M. Moseley, J. Gabrieli (Eds.) White Matter in Cognitive Neuroscience: Advances in Diffusion Tensor Imaging and its Applications
-
Dougherty R.F., Ben-Shachar M., Deutsch G., Potanina P., Bammer R., Wandell B.A. Occipital-callosal Pathways in Children - Validation and Atlas Development. Annals of the NY Academy of Sciences 2005, 1064:98-112. J.L. Ulmer, L. Parsons, M. Moseley, J. Gabrieli (Eds.).
-
(2005)
Annals of the NY Academy of Sciences
, vol.1064
, pp. 98-112
-
-
Dougherty, R.F.1
Ben-Shachar, M.2
Deutsch, G.3
Potanina, P.4
Bammer, R.5
Wandell, B.A.6
-
10
-
-
34547145165
-
*Power 3: a flexible statistical power analysis program for the social, behavioral, and biomedical sciences
-
*Power 3: a flexible statistical power analysis program for the social, behavioral, and biomedical sciences. Behav. Res. Methods 2007, 39:175-191.
-
(2007)
Behav. Res. Methods
, vol.39
, pp. 175-191
-
-
Faul, F.1
Erdfelder, E.2
Lang, A.G.3
Buchner, A.4
-
11
-
-
66149149080
-
Automated white-matter tractography using a probabilistic diffusion tensor atlas: application to temporal lobe epilepsy
-
Hagler D.J., Ahmadi M.E., Kuperman J., Holland D., McDonald C.R., Halgren E., Dale A.M. Automated white-matter tractography using a probabilistic diffusion tensor atlas: application to temporal lobe epilepsy. Hum. Brain Mapp. 2009, 30:1535-1547.
-
(2009)
Hum. Brain Mapp.
, vol.30
, pp. 1535-1547
-
-
Hagler, D.J.1
Ahmadi, M.E.2
Kuperman, J.3
Holland, D.4
McDonald, C.R.5
Halgren, E.6
Dale, A.M.7
-
12
-
-
36048983778
-
Tract probability maps in stereotaxic spaces: analyses of white matter anatomy and tract-specific quantification
-
Hua K., Zhang J.Y., Wakana S., Jiang H.Y., Li X., Reich D.S., Calabresi P.A., Pekar J.J., van Zijl P.C.M., Mori S. Tract probability maps in stereotaxic spaces: analyses of white matter anatomy and tract-specific quantification. Neuroimage 2008, 39:336-347.
-
(2008)
Neuroimage
, vol.39
, pp. 336-347
-
-
Hua, K.1
Zhang, J.Y.2
Wakana, S.3
Jiang, H.Y.4
Li, X.5
Reich, D.S.6
Calabresi, P.A.7
Pekar, J.J.8
van Zijl, P.C.M.9
Mori, S.10
-
13
-
-
31344441424
-
DtiStudio: resource program for diffusion tensor computation and fiber bundle tracking
-
Jiang H.Y., van Zijl P.C.M., Kim J., Pearlson G.D., Mori S. DtiStudio: resource program for diffusion tensor computation and fiber bundle tracking. Comput. Meth. Programs Biomed. 2006, 81:106-116.
-
(2006)
Comput. Meth. Programs Biomed.
, vol.81
, pp. 106-116
-
-
Jiang, H.Y.1
van Zijl, P.C.M.2
Kim, J.3
Pearlson, G.D.4
Mori, S.5
-
14
-
-
77952305380
-
Microscopic diffusion tensor imaging of the mouse brain
-
Jiang Y., Johnson G.A. Microscopic diffusion tensor imaging of the mouse brain. Neuroimage 2010, 50:465-471.
-
(2010)
Neuroimage
, vol.50
, pp. 465-471
-
-
Jiang, Y.1
Johnson, G.A.2
-
15
-
-
34447577998
-
High-throughput morphologic phenotyping of the mouse brain with magnetic resonance histology
-
Johnson G.A., Ali-Sharief A., Badea A., Brandenburg J., Cofer G., Fubara B., Gewalt S., Hedlund L.W., Upchurch L. High-throughput morphologic phenotyping of the mouse brain with magnetic resonance histology. Neuroimage 2007, 37:82-89.
-
(2007)
Neuroimage
, vol.37
, pp. 82-89
-
-
Johnson, G.A.1
Ali-Sharief, A.2
Badea, A.3
Brandenburg, J.4
Cofer, G.5
Fubara, B.6
Gewalt, S.7
Hedlund, L.W.8
Upchurch, L.9
-
16
-
-
77956061614
-
Waxholm Space: an image-based reference for coordinating mouse brain research
-
Johnson G.A., Badea A., Brandenburg J., Cofer G., Fubara B., Liu S., Nissanov J. Waxholm Space: an image-based reference for coordinating mouse brain research. Neuroimage 2010, 53:365-372.
-
(2010)
Neuroimage
, vol.53
, pp. 365-372
-
-
Johnson, G.A.1
Badea, A.2
Brandenburg, J.3
Cofer, G.4
Fubara, B.5
Liu, S.6
Nissanov, J.7
-
17
-
-
0036189843
-
Morphologic phenotyping with MR microscopy: the visible mouse
-
Johnson G.A., Cofer G.P., Gewalt S.L., Hedlund L.W. Morphologic phenotyping with MR microscopy: the visible mouse. Radiology 2002, 222:789-793.
-
(2002)
Radiology
, vol.222
, pp. 789-793
-
-
Johnson, G.A.1
Cofer, G.P.2
Gewalt, S.L.3
Hedlund, L.W.4
-
18
-
-
17744394309
-
A three-dimensional MRI atlas of the mouse brain with estimates of the average and variability
-
Kovacevic N., Henderson J.T., Chan E., Lifshitz N., Bishop J., Evans A.C., Henkelman R.M., Chen X.J. A three-dimensional MRI atlas of the mouse brain with estimates of the average and variability. Cereb. Cortex 2005, 15:639-645.
-
(2005)
Cereb. Cortex
, vol.15
, pp. 639-645
-
-
Kovacevic, N.1
Henderson, J.T.2
Chan, E.3
Lifshitz, N.4
Bishop, J.5
Evans, A.C.6
Henkelman, R.M.7
Chen, X.J.8
-
19
-
-
23944446932
-
White matter abnormalities in early-onset schizophrenia: a voxel-based diffusion tensor imaging study
-
Kumra S., Ashtari M., Cervellione K.L., Henderson I., Kester H., Roofeh D., Wu J.H., Clarke T., Thaden E., Kane J.M., Rhinewine J., Lencz T., Diamond A., Ardekani B.A., Szeszko P.R. White matter abnormalities in early-onset schizophrenia: a voxel-based diffusion tensor imaging study. J. Am. Acad. Child Adolesc. Psychiatry 2005, 44:934-941.
-
(2005)
J. Am. Acad. Child Adolesc. Psychiatry
, vol.44
, pp. 934-941
-
-
Kumra, S.1
Ashtari, M.2
Cervellione, K.L.3
Henderson, I.4
Kester, H.5
Roofeh, D.6
Wu, J.H.7
Clarke, T.8
Thaden, E.9
Kane, J.M.10
Rhinewine, J.11
Lencz, T.12
Diamond, A.13
Ardekani, B.A.14
Szeszko, P.R.15
-
20
-
-
2342542443
-
Characterizing non-Gaussian diffusion by using generalized diffusion tensors
-
Liu C., Bammer R., Moseley M.E. Characterizing non-Gaussian diffusion by using generalized diffusion tensors. Magn. Reson. Med. 2004, 51:924-937.
-
(2004)
Magn. Reson. Med.
, vol.51
, pp. 924-937
-
-
Liu, C.1
Bammer, R.2
Moseley, M.E.3
-
21
-
-
26244449786
-
A three-dimensional digital atlas database of the adult C57BL/6J mouse brain by magnetic resonance microscopy
-
Ma Y., Hof P.R., Grant S.C., Blackband S.J., Bennett R., Slatest L., McGuigan M.D., Benveniste H. A three-dimensional digital atlas database of the adult C57BL/6J mouse brain by magnetic resonance microscopy. Neuroscience 2005, 135:1203-1215.
-
(2005)
Neuroscience
, vol.135
, pp. 1203-1215
-
-
Ma, Y.1
Hof, P.R.2
Grant, S.C.3
Blackband, S.J.4
Bennett, R.5
Slatest, L.6
McGuigan, M.D.7
Benveniste, H.8
-
22
-
-
10744223881
-
A multimodal, multidimensional atlas of the C57BL/6J mouse brain
-
MacKenzie-Graham A., Lee E.F., Dinov I.D., Bota M., Shattuck D.W., Ruffins S., Yuan H., Konstantinidis F., Pitiot A., Ding Y., Hu G.G., Jacobs R.E., Toga A.W. A multimodal, multidimensional atlas of the C57BL/6J mouse brain. J. Anat. 2004, 204:93-102.
-
(2004)
J. Anat.
, vol.204
, pp. 93-102
-
-
MacKenzie-Graham, A.1
Lee, E.F.2
Dinov, I.D.3
Bota, M.4
Shattuck, D.W.5
Ruffins, S.6
Yuan, H.7
Konstantinidis, F.8
Pitiot, A.9
Ding, Y.10
Hu, G.G.11
Jacobs, R.E.12
Toga, A.W.13
-
23
-
-
34548351728
-
Multimodal, multidimensional models of mouse brain
-
MacKenzie-Graham A.J., Lee E.F., Dinov I.D., Yuan H., Jacobs R.E., Toga A.W. Multimodal, multidimensional models of mouse brain. Epilepsia 2007, 48:75-81.
-
(2007)
Epilepsia
, vol.48
, pp. 75-81
-
-
MacKenzie-Graham, A.J.1
Lee, E.F.2
Dinov, I.D.3
Yuan, H.4
Jacobs, R.E.5
Toga, A.W.6
-
24
-
-
22144493784
-
Increasing the power of functional maps of the medial temporal lobe by using large deformation diffeomorphic metric mapping
-
Miller M.I., Beg M.F., Ceritoglu C., Stark C. Increasing the power of functional maps of the medial temporal lobe by using large deformation diffeomorphic metric mapping. Proc. Natl. Acad. Sci. U. S. A. 2005, 102:9685-9690.
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 9685-9690
-
-
Miller, M.I.1
Beg, M.F.2
Ceritoglu, C.3
Stark, C.4
-
25
-
-
0034958194
-
Diffusion tensor imaging of the developing mouse brain
-
Mori S., Itoh R., Zhang J.Y., Kaufmann W.E., van Zijl P.C.M., Solaiyappan M., Yarowsky P. Diffusion tensor imaging of the developing mouse brain. Magn. Reson. Med. 2001, 46:18-23.
-
(2001)
Magn. Reson. Med.
, vol.46
, pp. 18-23
-
-
Mori, S.1
Itoh, R.2
Zhang, J.Y.3
Kaufmann, W.E.4
van Zijl, P.C.M.5
Solaiyappan, M.6
Yarowsky, P.7
-
26
-
-
40649091557
-
Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template
-
Mori S., Oishi K., Jiang H.Y., Jiang L., Li X., Akhter K., Hua K.G., Faria A.V., Mahmood A., Woods R., Toga A.W., Pike G.B., Neto P.R., Evans A., Zhang J.Y., Huang H., Miller M.I., Zijl P., Mazziotta J. Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template. Neuroimage 2008, 40:570-582.
-
(2008)
Neuroimage
, vol.40
, pp. 570-582
-
-
Mori, S.1
Oishi, K.2
Jiang, H.Y.3
Jiang, L.4
Li, X.5
Akhter, K.6
Hua, K.G.7
Faria, A.V.8
Mahmood, A.9
Woods, R.10
Toga, A.W.11
Pike, G.B.12
Neto, P.R.13
Evans, A.14
Zhang, J.Y.15
Huang, H.16
Miller, M.I.17
Zijl, P.18
Mazziotta, J.19
-
27
-
-
64049083876
-
Atlas-based whole brain white matter analysis using large deformation diffeomorphic metric mapping: application to normal elderly and Alzheimer's disease participants
-
Oishi K., Faria A., Jiang H.Y., Li X., Akhter K., Zhang J.Y., Hsu J.T., Miller M.I., van Zijl P.C.M., Albert M., Lyketsos C.G., Woods R., Toga A.W., Pike G.B., Rosa-Neto P., Evans A., Mazziotta J., Mori S. Atlas-based whole brain white matter analysis using large deformation diffeomorphic metric mapping: application to normal elderly and Alzheimer's disease participants. Neuroimage 2009, 46:486-499.
-
(2009)
Neuroimage
, vol.46
, pp. 486-499
-
-
Oishi, K.1
Faria, A.2
Jiang, H.Y.3
Li, X.4
Akhter, K.5
Zhang, J.Y.6
Hsu, J.T.7
Miller, M.I.8
van Zijl, P.C.M.9
Albert, M.10
Lyketsos, C.G.11
Woods, R.12
Toga, A.W.13
Pike, G.B.14
Rosa-Neto, P.15
Evans, A.16
Mazziotta, J.17
Mori, S.18
-
28
-
-
54149115464
-
Human brain white matter atlas: identification and assignment of common anatomical structures in superficial white matter
-
Oishi K., Zilles K., Amunts K., Faria A., Jiang H.Y., Li X., Akhter K., Hua K.G., Woods R., Toga A.W., Pike G.B., Rosa-Neto P., Evans A., Zhang J.Y., Huang H., Miller M.I., van Zijl P.C.M., Mazziotta J., Mori S. Human brain white matter atlas: identification and assignment of common anatomical structures in superficial white matter. Neuroimage 2008, 43:447-457.
-
(2008)
Neuroimage
, vol.43
, pp. 447-457
-
-
Oishi, K.1
Zilles, K.2
Amunts, K.3
Faria, A.4
Jiang, H.Y.5
Li, X.6
Akhter, K.7
Hua, K.G.8
Woods, R.9
Toga, A.W.10
Pike, G.B.11
Rosa-Neto, P.12
Evans, A.13
Zhang, J.Y.14
Huang, H.15
Miller, M.I.16
van Zijl, P.C.M.17
Mazziotta, J.18
Mori, S.19
-
29
-
-
4344692509
-
White matter hemisphere asymmetries in healthy subjects and in schizophrenia: a diffusion tensor MRI study
-
Park H.J., Westin C.F., Kubicki M., Maier S.E., Niznikiewicz M., Baer A., Frumin M., Kikinis R., Jolesz F.A., McCarley R.W., Shenton M.E. White matter hemisphere asymmetries in healthy subjects and in schizophrenia: a diffusion tensor MRI study. Neuroimage 2004, 23:213-223.
-
(2004)
Neuroimage
, vol.23
, pp. 213-223
-
-
Park, H.J.1
Westin, C.F.2
Kubicki, M.3
Maier, S.E.4
Niznikiewicz, M.5
Baer, A.6
Frumin, M.7
Kikinis, R.8
Jolesz, F.A.9
McCarley, R.W.10
Shenton, M.E.11
-
31
-
-
0029908076
-
Toward a quantitative assessment of diffusion anisotropy
-
Pierpaoli C., Basser P.J. Toward a quantitative assessment of diffusion anisotropy. Magn. Reson. Med. 1996, 36:893-906.
-
(1996)
Magn. Reson. Med.
, vol.36
, pp. 893-906
-
-
Pierpaoli, C.1
Basser, P.J.2
-
32
-
-
18044380678
-
Demyelination increases radial diffusivity in corpus callosum of mouse brain
-
Song S.K., Yoshino J., Le T.Q., Lin S.J., Sun S.W., Cross A.H., Armstrong R.C. Demyelination increases radial diffusivity in corpus callosum of mouse brain. Neuroimage 2005, 26:132-140.
-
(2005)
Neuroimage
, vol.26
, pp. 132-140
-
-
Song, S.K.1
Yoshino, J.2
Le, T.Q.3
Lin, S.J.4
Sun, S.W.5
Cross, A.H.6
Armstrong, R.C.7
-
33
-
-
18744372437
-
Spatiotemporal maturation patterns of murine brain quantified by diffusion tensor MRI and deformation-based morphometry
-
Verma R., Mori S., Shen D.G., Yarowsky P., Zhang J.Y., Davatzikos C. Spatiotemporal maturation patterns of murine brain quantified by diffusion tensor MRI and deformation-based morphometry. Proc. Natl. Acad. Sci. U. S. A. 2005, 102:6978-6983.
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 6978-6983
-
-
Verma, R.1
Mori, S.2
Shen, D.G.3
Yarowsky, P.4
Zhang, J.Y.5
Davatzikos, C.6
-
34
-
-
34250158060
-
Reproducibility of quantitative tractography methods applied to cerebral white matter
-
Wakana S., Caprihan A., Panzenboeck M.M., Fallon J.H., Perry M., Gollub R.L., Hua K.G., Zhang J.Y., Jiang H.Y., Dubey P., Blitz A., van Zijl P., Mori S. Reproducibility of quantitative tractography methods applied to cerebral white matter. Neuroimage 2007, 36:630-644.
-
(2007)
Neuroimage
, vol.36
, pp. 630-644
-
-
Wakana, S.1
Caprihan, A.2
Panzenboeck, M.M.3
Fallon, J.H.4
Perry, M.5
Gollub, R.L.6
Hua, K.G.7
Zhang, J.Y.8
Jiang, H.Y.9
Dubey, P.10
Blitz, A.11
van Zijl, P.12
Mori, S.13
-
35
-
-
0031910991
-
Automated image registration: I. general methods and intrasubject, intramodality validation
-
Woods R.P., Grafton S.T., Holmes C.J., Cherry S.R., Mazziotta J.C. Automated image registration: I. general methods and intrasubject, intramodality validation. J. Comput. Assist. Tomogr. 1998, 22:139-152.
-
(1998)
J. Comput. Assist. Tomogr.
, vol.22
, pp. 139-152
-
-
Woods, R.P.1
Grafton, S.T.2
Holmes, C.J.3
Cherry, S.R.4
Mazziotta, J.C.5
-
36
-
-
0038262644
-
Spatial normalization of diffusion tensor fields
-
Xu D.R., Mori S., Shen D.G., van Zijl P.C.M., Davatzikos C. Spatial normalization of diffusion tensor fields. Magn. Reson. Med. 2003, 50:175-182.
-
(2003)
Magn. Reson. Med.
, vol.50
, pp. 175-182
-
-
Xu, D.R.1
Mori, S.2
Shen, D.G.3
van Zijl, P.C.M.4
Davatzikos, C.5
-
37
-
-
20444418166
-
Mapping postnatal mouse brain development with diffusion tensor microimaging
-
Zhang J.Y., Miller M.I., Plachez C., Richards L.J., Yarowsky P., van Zijl P., Mori S. Mapping postnatal mouse brain development with diffusion tensor microimaging. Neuroimage 2005, 26:1042-1051.
-
(2005)
Neuroimage
, vol.26
, pp. 1042-1051
-
-
Zhang, J.Y.1
Miller, M.I.2
Plachez, C.3
Richards, L.J.4
Yarowsky, P.5
van Zijl, P.6
Mori, S.7
|