-
1
-
-
0002067504
-
Stable configurations of polypeptide chains
-
Pauling L, Corey RB. Stable configurations of polypeptide chains. Proc R Soc Lond 1953, B141:21-33.
-
(1953)
Proc R Soc Lond
, vol.B141
, pp. 21-33
-
-
Pauling, L.1
Corey, R.B.2
-
2
-
-
73649194755
-
Stereochemistry of polypeptide chain configurations
-
10.1016/S0022-2836(63)80023-6, 13990617
-
Ramachandran GN, Ramakrishnan C, Sasisekharan V. Stereochemistry of polypeptide chain configurations. J Mol Biol 1963, 7:95-99. 10.1016/S0022-2836(63)80023-6, 13990617.
-
(1963)
J Mol Biol
, vol.7
, pp. 95-99
-
-
Ramachandran, G.N.1
Ramakrishnan, C.2
Sasisekharan, V.3
-
3
-
-
0014347799
-
Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units
-
10.1002/bip.1968.360061006, 5685102
-
Venkatachalam CM. Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units. Biopolymers 1968, 6:1425-1436. 10.1002/bip.1968.360061006, 5685102.
-
(1968)
Biopolymers
, vol.6
, pp. 1425-1436
-
-
Venkatachalam, C.M.1
-
4
-
-
0020997912
-
Dictionary of protein secondary structure: pattern recognition of hydrogen bonded and geometrical features
-
10.1002/bip.360221211, 6667333
-
Kabsch W, Sander C. Dictionary of protein secondary structure: pattern recognition of hydrogen bonded and geometrical features. Biopolymers 1983, 22:2577-2637. 10.1002/bip.360221211, 6667333.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
5
-
-
0033578684
-
Protein secondary structure prediction based on position-specific scoring matrices
-
10.1006/jmbi.1999.3091, 10493868
-
Jones DT. Protein secondary structure prediction based on position-specific scoring matrices. J Mol Biol 1999, 292:195-202. 10.1006/jmbi.1999.3091, 10493868.
-
(1999)
J Mol Biol
, vol.292
, pp. 195-202
-
-
Jones, D.T.1
-
6
-
-
0028158628
-
PHD - an automatic mail server for protein secondary structure prediction
-
Rost B, Sander C, Schneider R. PHD - an automatic mail server for protein secondary structure prediction. Comput Appl Biosci 1994, 10:53-60.
-
(1994)
Comput Appl Biosci
, vol.10
, pp. 53-60
-
-
Rost, B.1
Sander, C.2
Schneider, R.3
-
7
-
-
0031865006
-
Touring protein fold space with Dali/FSSP
-
10.1093/nar/26.1.316, 147193, 9399863
-
Holm L, Sander C. Touring protein fold space with Dali/FSSP. Nucleic Acids Res 1998, 26:316-319. 10.1093/nar/26.1.316, 147193, 9399863.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 316-319
-
-
Holm, L.1
Sander, C.2
-
8
-
-
0026690571
-
A new approach to protein fold recognition
-
10.1038/358086a0, 1614539
-
Jones DT, Taylor WR, Thornton JM. A new approach to protein fold recognition. Nature 1992, 358:86-89. 10.1038/358086a0, 1614539.
-
(1992)
Nature
, vol.358
, pp. 86-89
-
-
Jones, D.T.1
Taylor, W.R.2
Thornton, J.M.3
-
9
-
-
0031909873
-
Recognition of analogous and homologous protein folds - assessment of prediction success and associated alignment accuracy using empirical substitution matrices
-
10.1093/protein/11.1.1, 9579654
-
Russel RB, Saqi MA, Bates PA, Sayle RA, Sternberg MJ. Recognition of analogous and homologous protein folds - assessment of prediction success and associated alignment accuracy using empirical substitution matrices. Protein Eng 1998, 11:1-9. 10.1093/protein/11.1.1, 9579654.
-
(1998)
Protein Eng
, vol.11
, pp. 1-9
-
-
Russel, R.B.1
Saqi, M.A.2
Bates, P.A.3
Sayle, R.A.4
Sternberg, M.J.5
-
10
-
-
0028232955
-
Searching protein structure databases has come of age
-
10.1002/prot.340190302, 7937731
-
Holm L, Sander C. Searching protein structure databases has come of age. Proteins 1994, 19:165-173. 10.1002/prot.340190302, 7937731.
-
(1994)
Proteins
, vol.19
, pp. 165-173
-
-
Holm, L.1
Sander, C.2
-
11
-
-
0031766401
-
HOMSTRAD: a database of protein structure alignments for homologous families
-
10.1002/pro.5560071126, 2143859, 9828015
-
Mizuguchi K, Deane CM, Blundell TL, Overington JP. HOMSTRAD: a database of protein structure alignments for homologous families. Protein Sci 1998, 7:2469-2471. 10.1002/pro.5560071126, 2143859, 9828015.
-
(1998)
Protein Sci
, vol.7
, pp. 2469-2471
-
-
Mizuguchi, K.1
Deane, C.M.2
Blundell, T.L.3
Overington, J.P.4
-
12
-
-
0035165967
-
A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm
-
10.1093/nar/29.1.228, 29823, 11125099
-
Shindyalov IN, Bourne PE. A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm. Nucleic Acids Res 2001, 29:228-229. 10.1093/nar/29.1.228, 29823, 11125099.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 228-229
-
-
Shindyalov, I.N.1
Bourne, P.E.2
-
13
-
-
0028961335
-
SCOP: a structural classification of proteins database for the investigation of sequences and structures
-
Murzin AG, Brenner SE, Hubbard T, Chothia C. SCOP: a structural classification of proteins database for the investigation of sequences and structures. J Mol Biol 1995, 247:536-540.
-
(1995)
J Mol Biol
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
14
-
-
0030777303
-
CATH - a hierarchic classification of protein domain structures
-
10.1016/S0969-2126(97)00260-8, 9309224
-
Orengo CA, Michie AD, Jones S, Jones DT, Swindells MB, Thornton JM. CATH - a hierarchic classification of protein domain structures. Structure 1997, 5:1093-1108. 10.1016/S0969-2126(97)00260-8, 9309224.
-
(1997)
Structure
, vol.5
, pp. 1093-1108
-
-
Orengo, C.A.1
Michie, A.D.2
Jones, S.3
Jones, D.T.4
Swindells, M.B.5
Thornton, J.M.6
-
15
-
-
0035788311
-
Creating structure features by data mining the PDB to use as molecular-replacement models
-
Oldfield TJ. Creating structure features by data mining the PDB to use as molecular-replacement models. Acta Cryst 2001, D57:1421-1427.
-
(2001)
Acta Cryst
, vol.D57
, pp. 1421-1427
-
-
Oldfield, T.J.1
-
16
-
-
0032568859
-
Detection of protein three-dimensional side-chain patterns: new examples of convergent evolution
-
10.1006/jmbi.1998.1844, 9642096
-
Russell RB. Detection of protein three-dimensional side-chain patterns: new examples of convergent evolution. J Mol Biol 1998, 279:1211-1227. 10.1006/jmbi.1998.1844, 9642096.
-
(1998)
J Mol Biol
, vol.279
, pp. 1211-1227
-
-
Russell, R.B.1
-
17
-
-
0031697713
-
A geometric algorithm to find small but highly similar 3D substructures in proteins
-
10.1093/bioinformatics/14.6.516, 9694990
-
Pennec X, Ayache N. A geometric algorithm to find small but highly similar 3D substructures in proteins. Bioinformatics 1998, 14:516-522. 10.1093/bioinformatics/14.6.516, 9694990.
-
(1998)
Bioinformatics
, vol.14
, pp. 516-522
-
-
Pennec, X.1
Ayache, N.2
-
18
-
-
67849126816
-
RASMOT-3D PRO: a3D motif search webserver
-
2703991, 19417073
-
Debret G, Martel A, Cuniasse P. RASMOT-3D PRO: a3D motif search webserver. Nucleic Acids Res 2009, 37(Suppl. 2):W459-464. 2703991, 19417073.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.SUPPL. 2
-
-
Debret, G.1
Martel, A.2
Cuniasse, P.3
-
19
-
-
0033613813
-
Recognition of spatial motifs in protein structures
-
10.1006/jmbi.1998.2393, 9917419
-
Kleywegt GJ. Recognition of spatial motifs in protein structures. J Mol Biol 1999, 285:1887-1897. 10.1006/jmbi.1998.2393, 9917419.
-
(1999)
J Mol Biol
, vol.285
, pp. 1887-1897
-
-
Kleywegt, G.J.1
-
20
-
-
5144226338
-
The DxDxDG motif for calcium binding: multiple structural contexts and implications for evolution
-
10.1016/j.jmb.2004.08.077, 15476814
-
Rigden DJ, Galperin MY. The DxDxDG motif for calcium binding: multiple structural contexts and implications for evolution. J Mol Biol 2004, 343:971-984. 10.1016/j.jmb.2004.08.077, 15476814.
-
(2004)
J Mol Biol
, vol.343
, pp. 971-984
-
-
Rigden, D.J.1
Galperin, M.Y.2
-
21
-
-
11844292002
-
Inference of protein function from protein structure
-
10.1016/j.str.2004.10.015, 15642267
-
Pal D, Eisenberg D. Inference of protein function from protein structure. Structure 2005, 13:121-130. 10.1016/j.str.2004.10.015, 15642267.
-
(2005)
Structure
, vol.13
, pp. 121-130
-
-
Pal, D.1
Eisenberg, D.2
-
22
-
-
14744305761
-
Using a library of structural templates to recognise catalytic sites and explore their evolution in homologous families
-
10.1016/j.jmb.2005.01.044, 15755451
-
Torrance JW, Bartlett GJ, Porter CT, Thornton JM. Using a library of structural templates to recognise catalytic sites and explore their evolution in homologous families. J Mol Biol 2005, 347:565-581. 10.1016/j.jmb.2005.01.044, 15755451.
-
(2005)
J Mol Biol
, vol.347
, pp. 565-581
-
-
Torrance, J.W.1
Bartlett, G.J.2
Porter, C.T.3
Thornton, J.M.4
-
23
-
-
22544486576
-
Protein function prediction using local 3D templates
-
10.1016/j.jmb.2005.05.067, 16019027
-
Laskowski RA, Watson JD, Thornton JM. Protein function prediction using local 3D templates. J Mol Biol 2005, 351:614-626. 10.1016/j.jmb.2005.05.067, 16019027.
-
(2005)
J Mol Biol
, vol.351
, pp. 614-626
-
-
Laskowski, R.A.1
Watson, J.D.2
Thornton, J.M.3
-
24
-
-
29444457054
-
Fold independent structural comparisons of protein-ligand binding sites for exploring functional relationships
-
10.1016/j.jmb.2005.11.044, 16359705
-
Gold ND, Jackson RM. Fold independent structural comparisons of protein-ligand binding sites for exploring functional relationships. J Mol Biol 2006, 355:1112-1124. 10.1016/j.jmb.2005.11.044, 16359705.
-
(2006)
J Mol Biol
, vol.355
, pp. 1112-1124
-
-
Gold, N.D.1
Jackson, R.M.2
-
25
-
-
0032843737
-
Structure-based functional motif identifies a potential disulfide oxidoreductase active site in the serine/threonine protein phosphatase-1 subfamily
-
Fetrow JS, Siew N, Skolnick J. Structure-based functional motif identifies a potential disulfide oxidoreductase active site in the serine/threonine protein phosphatase-1 subfamily. FASEB J 1999, 13:1866-74.
-
(1999)
FASEB J
, vol.13
, pp. 1866-1874
-
-
Fetrow, J.S.1
Siew, N.2
Skolnick, J.3
-
26
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling
-
10.1002/elps.1150181505, 9504803
-
Guex N, Peitsch MC. SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling. Electrophoresis 1997, 18:2714-2723. 10.1002/elps.1150181505, 9504803.
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
27
-
-
33645792604
-
Physically realistic homology models built with ROSETTA can be more accurate than their templates
-
10.1073/pnas.0509355103, 1459360, 16567638
-
Misura KM, Chivian D, Rohl CA, Kim DE, Baker D. Physically realistic homology models built with ROSETTA can be more accurate than their templates. Proc Natl Acad Sci 2006, 103:5361-5366. 10.1073/pnas.0509355103, 1459360, 16567638.
-
(2006)
Proc Natl Acad Sci
, vol.103
, pp. 5361-5366
-
-
Misura, K.M.1
Chivian, D.2
Rohl, C.A.3
Kim, D.E.4
Baker, D.5
-
28
-
-
36749055649
-
Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home
-
10.1002/prot.21636, 17894356
-
Das R, Qian B, Raman S, Vernon R, Thompson J, Bradley P, Khare S, Tyka MD, Bhat D, Chivian D, Kim DE, Sheffler WH, Malmström L, Wollacott AM, Wang C, André I, Baker D. Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home. Proteins 2007, 69:118-128. 10.1002/prot.21636, 17894356.
-
(2007)
Proteins
, vol.69
, pp. 118-128
-
-
Das, R.1
Qian, B.2
Raman, S.3
Vernon, R.4
Thompson, J.5
Bradley, P.6
Khare, S.7
Tyka, M.D.8
Bhat, D.9
Chivian, D.10
Kim, D.E.11
Sheffler, W.H.12
Malmström, L.13
Wollacott, A.M.14
Wang, C.15
André, I.16
Baker, D.17
-
29
-
-
0000282550
-
Analysis of measurements based on the singular value decomposition
-
Hanson RJ, Norris MJ. Analysis of measurements based on the singular value decomposition. SIAM J Sci and Stat Comput 1981, 2:363-373.
-
(1981)
SIAM J Sci and Stat Comput
, vol.2
, pp. 363-373
-
-
Hanson, R.J.1
Norris, M.J.2
-
31
-
-
0141850386
-
An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis
-
10.1093/bioinformatics/btg226, 12967960
-
Barker JA, Thornton JM. An algorithm for constraint-based structural template matching: application to 3D templates with statistical analysis. Bioinformatics 2003, 19:1644-1649. 10.1093/bioinformatics/btg226, 12967960.
-
(2003)
Bioinformatics
, vol.19
, pp. 1644-1649
-
-
Barker, J.A.1
Thornton, J.M.2
-
32
-
-
0037375799
-
Efficient identification of side-chain patterns using a multidimensional index tree
-
10.1002/prot.10338, 12596267
-
Hamelryck T. Efficient identification of side-chain patterns using a multidimensional index tree. Proteins 2003, 51:96-108. 10.1002/prot.10338, 12596267.
-
(2003)
Proteins
, vol.51
, pp. 96-108
-
-
Hamelryck, T.1
-
33
-
-
0037424601
-
A model for statistical significance of local similarities in structure
-
10.1016/S0022-2836(03)00045-7, 12595245
-
Stark A, Sunyaev S, Russel RB. A model for statistical significance of local similarities in structure. J Mol Biol 2003, 326:1307-1316. 10.1016/S0022-2836(03)00045-7, 12595245.
-
(2003)
J Mol Biol
, vol.326
, pp. 1307-1316
-
-
Stark, A.1
Sunyaev, S.2
Russel, R.B.3
-
34
-
-
0032605828
-
Processing and analysis of CASP3 protein structure predictions
-
Zemla A, Venclovas C, Moult J, Fidelis K. Processing and analysis of CASP3 protein structure predictions. Proteins 1999, S3:22-29.
-
(1999)
Proteins
, vol.S3
, pp. 22-29
-
-
Zemla, A.1
Venclovas, C.2
Moult, J.3
Fidelis, K.4
-
35
-
-
0020475392
-
On the problem of comparing protein structures. Development and applications of a new method for the assessment of structural similarities of polypeptide conformations
-
10.1016/0022-2836(82)90334-5, 7086905
-
Sippl MJ. On the problem of comparing protein structures. Development and applications of a new method for the assessment of structural similarities of polypeptide conformations. J Mol Biol 1982, 156:359-388. 10.1016/0022-2836(82)90334-5, 7086905.
-
(1982)
J Mol Biol
, vol.156
, pp. 359-388
-
-
Sippl, M.J.1
-
36
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
10.1006/jmbi.1993.1489, 8377180
-
Holm L, Sander C. Protein structure comparison by alignment of distance matrices. J Mol Biol 1993, 233:123-138. 10.1006/jmbi.1993.1489, 8377180.
-
(1993)
J Mol Biol
, vol.233
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
38
-
-
0043180474
-
PISCES: a protein sequence culling server
-
10.1093/bioinformatics/btg224, 12912846
-
Wang G, Dunbrack RL. PISCES: a protein sequence culling server. Bioinformatics 2003, 19:1589-1591. 10.1093/bioinformatics/btg224, 12912846.
-
(2003)
Bioinformatics
, vol.19
, pp. 1589-1591
-
-
Wang, G.1
Dunbrack, R.L.2
-
39
-
-
23144438711
-
PISCES: recent improvements to a PDB sequence culling server
-
1160163, 15980589
-
Wang G, Dunbrack RL. PISCES: recent improvements to a PDB sequence culling server. Nucleic Acids Res 2005, 33(Suppl 2):W94-W98. 1160163, 15980589.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.SUPPL. 2
-
-
Wang, G.1
Dunbrack, R.L.2
-
40
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
10.1093/nar/25.17.3389, 146917, 9254694
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25:3389-3402. 10.1093/nar/25.17.3389, 146917, 9254694.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
41
-
-
33845892163
-
Crystal structure of apo-calmodulin bound to the first two IQ motifs of myosin V reveals essential recognition features
-
10.1073/pnas.0609436103, 1687203, 17151196
-
Houdusse A, Gaucher JF, Krementsova E, Mui S, Trybus KM, Cohen C. Crystal structure of apo-calmodulin bound to the first two IQ motifs of myosin V reveals essential recognition features. Proc Natl Acad Sci 2006, 103:19326-19331. 10.1073/pnas.0609436103, 1687203, 17151196.
-
(2006)
Proc Natl Acad Sci
, vol.103
, pp. 19326-19331
-
-
Houdusse, A.1
Gaucher, J.F.2
Krementsova, E.3
Mui, S.4
Trybus, K.M.5
Cohen, C.6
-
42
-
-
33750539273
-
Importance of individual side chains for the stability of a protein fold: computational alanine scanning of the insulin monomer
-
10.1002/jcc.20512, 16981237
-
Zoete V, Meuwly M. Importance of individual side chains for the stability of a protein fold: computational alanine scanning of the insulin monomer. J Comput Chem 2006, 27:1843-1857. 10.1002/jcc.20512, 16981237.
-
(2006)
J Comput Chem
, vol.27
, pp. 1843-1857
-
-
Zoete, V.1
Meuwly, M.2
-
43
-
-
0036291145
-
Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations
-
10.1016/S0022-2836(02)00442-4, 12079393
-
Guerois R, Nielsen JE, Serrano L. Predicting changes in the stability of proteins and protein complexes: a study of more than 1000 mutations. J Mol Biol 2002, 320:369-387. 10.1016/S0022-2836(02)00442-4, 12079393.
-
(2002)
J Mol Biol
, vol.320
, pp. 369-387
-
-
Guerois, R.1
Nielsen, J.E.2
Serrano, L.3
-
44
-
-
0031009430
-
Alanine scanning mutagenesis of insulin
-
10.1074/jbc.272.20.12978, 9148904
-
Kristensen C, Kjeldsen T, Wiberg FC, Schäffer L, Hach M, Havelund S, Bass J, Steiner DF, Andersen AS. Alanine scanning mutagenesis of insulin. J Biol Chem 1997, 272:12978-12983. 10.1074/jbc.272.20.12978, 9148904.
-
(1997)
J Biol Chem
, vol.272
, pp. 12978-12983
-
-
Kristensen, C.1
Kjeldsen, T.2
Wiberg, F.C.3
Schäffer, L.4
Hach, M.5
Havelund, S.6
Bass, J.7
Steiner, D.F.8
Andersen, A.S.9
-
45
-
-
33744491549
-
Crystal structure of the yeast His6 enzyme suggests a reaction mechanism
-
10.1110/ps.062144406, 2242542, 16731983
-
Quevillon-Cheruel S, Leulliot N, Graille M, Blondeau K, Janin J, van Tilbeurg H. Crystal structure of the yeast His6 enzyme suggests a reaction mechanism. Protein Sci 2006, 15:1516-1521. 10.1110/ps.062144406, 2242542, 16731983.
-
(2006)
Protein Sci
, vol.15
, pp. 1516-1521
-
-
Quevillon-Cheruel, S.1
Leulliot, N.2
Graille, M.3
Blondeau, K.4
Janin, J.5
van Tilbeurg, H.6
-
47
-
-
23144436398
-
The FoldX web server: an online force field
-
1160148, 15980494
-
Schymkowitz J, Borg J, Stricher F, Nys R, Rousseau F, Serrano L. The FoldX web server: an online force field. Nucleic Acids Res 2005, 33(Suppl 2):W382-W388. 1160148, 15980494.
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.SUPPL. 2
-
-
Schymkowitz, J.1
Borg, J.2
Stricher, F.3
Nys, R.4
Rousseau, F.5
Serrano, L.6
-
48
-
-
0042622410
-
WebFEATURE: an interactive web tool for identifying and visualizing functional sites on macromolecular structures
-
10.1093/nar/gkg553, 168960, 12824318
-
Liang MP, Banatao DR, Klein TE, Brutlag DL, Altman RB. WebFEATURE: an interactive web tool for identifying and visualizing functional sites on macromolecular structures. Nucleic Acids Res 2003, 31:3324-3327. 10.1093/nar/gkg553, 168960, 12824318.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3324-3327
-
-
Liang, M.P.1
Banatao, D.R.2
Klein, T.E.3
Brutlag, D.L.4
Altman, R.B.5
-
49
-
-
0031626949
-
Recognizing protein binding sites using statistical descriptions of their 3D environments
-
Wei L, Altman RB. Recognizing protein binding sites using statistical descriptions of their 3D environments. Pac Symp Biocomput 1998, 3:497-508.
-
(1998)
Pac Symp Biocomput
, vol.3
, pp. 497-508
-
-
Wei, L.1
Altman, R.B.2
-
50
-
-
37549057565
-
Robust recognition of zinc binding sites in proteins
-
2144590, 18042678
-
Ebert JC, Altman RB. Robust recognition of zinc binding sites in proteins. Protein Sci 2008, 17:54-65. 2144590, 18042678.
-
(2008)
Protein Sci
, vol.17
, pp. 54-65
-
-
Ebert, J.C.1
Altman, R.B.2
-
51
-
-
79954524893
-
Structure-based de novo prediction of zinc-binding sites in proteins of unknown function
-
10.1093/bioinformatics/btr133, 21414989
-
Zhao W, Xu M, Liang Z, Ding B, Niu H, Teng M. Structure-based de novo prediction of zinc-binding sites in proteins of unknown function. Bioinformatics 2011, 27:1262-1268. 10.1093/bioinformatics/btr133, 21414989.
-
(2011)
Bioinformatics
, vol.27
, pp. 1262-1268
-
-
Zhao, W.1
Xu, M.2
Liang, Z.3
Ding, B.4
Niu, H.5
Teng, M.6
-
52
-
-
0030320384
-
Conserved features in the active site of nonhomologous serine proteases
-
10.1016/S1359-0278(96)00052-1, 9080183
-
Bagley SC, Altman RB. Conserved features in the active site of nonhomologous serine proteases. Fold Des 1996, 1:371-379. 10.1016/S1359-0278(96)00052-1, 9080183.
-
(1996)
Fold Des
, vol.1
, pp. 371-379
-
-
Bagley, S.C.1
Altman, R.B.2
-
53
-
-
0033954256
-
The Protein Data Bank
-
10.1093/nar/28.1.235, 102472, 10592235
-
Berman HM, Westbrook J, Feng Z, Gilliland G, Bhat TN, Weissig H, Shindyalov IN, Bourne PE. The Protein Data Bank. Nucleic Acids Res 2000, 28:235-242. 10.1093/nar/28.1.235, 102472, 10592235.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
54
-
-
0031714689
-
Structure calculation of biological macromolecules from NMR data
-
10.1017/S0033583598003436, 9794034
-
Güntert P. Structure calculation of biological macromolecules from NMR data. Q Rev Biophys 1998, 31:145-237. 10.1017/S0033583598003436, 9794034.
-
(1998)
Q Rev Biophys
, vol.31
, pp. 145-237
-
-
Güntert, P.1
-
55
-
-
35448929112
-
A large data set comparison of protein structures determined by crystallography and NMR: statistical test for structural differences and the effect of crystal packing
-
10.1002/prot.21507, 17623851
-
Andrec M, Snyder DA, Zhou Z, Young J, Montelione GT, Levy RM. A large data set comparison of protein structures determined by crystallography and NMR: statistical test for structural differences and the effect of crystal packing. Proteins 2007, 69:449-465. 10.1002/prot.21507, 17623851.
-
(2007)
Proteins
, vol.69
, pp. 449-465
-
-
Andrec, M.1
Snyder, D.A.2
Zhou, Z.3
Young, J.4
Montelione, G.T.5
Levy, R.M.6
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