A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm

Nucleic Acids Research

Volumn 29, Issue 1, 2001, Pages 228-229

  Shindyalov, Ilya N ^a   Bourne, Philip E ^b  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b San Diego   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; POLYPEPTIDE; PROTEIN;

ALGORITHM; AMINO ACID SEQUENCE; ARTICLE; COMBINATORIAL LIBRARY; COMPUTER PROGRAM; DATA BASE; GENE STRUCTURE; GENETIC PROCEDURES; INTERNET; PRIORITY JOURNAL; PROTEIN STRUCTURE; STRUCTURE ANALYSIS; THREE DIMENSIONAL IMAGING;

EID: 0035165967     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/29.1.228     Document Type: Article

References (10)

1. The PDB uniformity project
2. Touring protein fold space with Dali/FSSP
3. An alternative view of protein fold space
4. Structural relationships of homologous proteins as a fundamental principle in homology modeling
5. SCOP: A structural classification of proteins database
6. The CATH Database provides insights into protein structure/function relationships
7. Structural genomics: Beyond the human genome project
8. Protein structure alignment by incremental combinatorial extension of the optimum path
9. The structural alignment between two proteins: Is there a unique answer?
10. Large-scale comparison of protein sequence alignment algorithms with structure alignments