Role of Fig1, a component of the low-affinity calcium uptake system, in growth and sexual development of filamentous fungi

Eukaryotic Cell

Volumn 11, Issue 8, 2012, Pages 978-988

  Cavinder, Brad ^a   Trail, Frances ^a  

^a MICHIGAN STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CALCIUM; CALCIUM CHANNEL; CATION TRANSPORT PROTEIN; FUNGAL PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; CHEMISTRY; FERTILITY; FUNGUS HYPHAE; FUNGUS SPORE; FUSARIUM; GENE DELETION; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; MOLECULAR GENETICS; PATHOGENICITY; PHYSIOLOGY;

AMINO ACID SEQUENCE; CALCIUM; CALCIUM CHANNELS; CATION TRANSPORT PROTEINS; FERTILITY; FUNGAL PROTEINS; FUSARIUM; GENE DELETION; HYPHAE; MOLECULAR SEQUENCE DATA; SPORES, FUNGAL;

ASCOMYCOTA; FUNGI; GIBBERELLA ZEAE; NEUROSPORA CRASSA; TRITICUM AESTIVUM;

EID: 84865645638     PISSN: 15359778     EISSN: None     Source Type: Journal    
DOI: 10.1128/EC.00007-12     Document Type: Article

References (74)

1. Abràmoff MD, Magalhães PJ, Ram SJ. 2004. Image processing with ImageJ. Biophotonics Int. 11:36-42.
2. Alby K, Schaefer D, Sherwood RK, Jones SK, Jr, Bennett RJ. 2010. Identification of a cell death pathway in Candida albicans during the response to pheromone. Eukaryot. Cell 9:1690-1701.
3. Beckett A, Crawford RM. 1973. The development and fine structure of the ascus apex and its role during spore discharge in Xylaria longipes. New Phytol. 72:357-369.
4. Berridge MJ, Bootman MD, Roderick HL. 2003. Calcium signalling: dynamics, homeostasis and remodelling. Nat. Rev. Mol. Cell Biol. 4:517-529.
5. Booth C. 1971. The genus Fusarium. Commonwealth Mycological Institute, Kew, Surrey, England.
6. Bormann J, Tudzynski P. 2009. Deletion of Mid1, a putative stretch-activated calcium channel in Claviceps purpurea, affects vegetative growth cell wall synthesis and virulence. Microbiology 155:3922-3933.
7. Bowden RL, Leslie JF. 1999. Sexual recombination in Gibberella zeae. Phytopathology 89:182-188.
8. Brand A, Lee K, Veses V, Gow N. 2009. Calcium homeostasis is required for contact-dependent helical and sinusoidal tip growth in Candida albicans hyphae. Mol. Microbiol. 71:1155-1164.
9. Brand A, et al. 2007. Hyphal orientation of Candida albicans is regulated by a calcium-dependent mechanism. Curr. Biol. 17:347-352.
10. 2+signaling machinery in early animal and fungal evolution. Mol. Biol. Evol. 29:91-100.
11. Camacho C, et al. 2009. BLAST: architecture and applications. BMC Bioinformatics 10:421-429.
12. Cappellini RA, Peterson JL. 1965. Macroconidium formation in submerged cultures by a non-sporulating strain of Gibberella zeae. Mycologia 57:962-966.
13. Carroll AM, Sweigard JA, Valent B. 1994. Improved vectors for selecting resistance to hygromycin. Fungal Genet. Newsl. 41:22.
14. Catlett NL, Lee B, Yoder OC, Turgeon BG. 2003. Split-marker recombination for efficient targeted deletion of fungal genes. Fungal Genet. Newsl. 50:9-11.
15. Cavalier-Smith T. 2009. Megaphylogeny, cell body plans, adaptive zones: causes and timing of eukaryote basal radiations. J. Eukaryot. Microbiol. 56:26-33.
16. Cavalier-Smith T, Chao EE. 2010. Phylogeny and evolution of Apusomonadida (Protozoa: Apusozoa): new genera and species. Protist 161: 549-576.
17. Cavinder B, Haman A, Lew RR, Trail F. 2011. Mid1, a mechanosensitive calcium ion channel, affects growth, development, and ascospore discharge in the filamentous fungus Gibberella zeae. Eukaryot. Cell 10:832-841.
18. Cock PJA, et al. 2009. Biopython: freely available Python tools for computational molecular biology and bioinformatics. Bioinformatics 25: 1422-1423.
19. Colot HV, et al. 2006. A high-throughput gene knockout procedure for Neurospora reveals functions for multiple transcription factors. Proc. Natl. Acad. Sci. U. S. A. 103:10352-10357.
20. Courchesne WE, Vlasek C, Klukovich R, Coffee S. 2011. Ethanol induces calcium influx via the Cch1-Mid1 transporter in Saccharomyces cerevisiae. Arch. Microbiol. 193:323-334.
21. Czymmek KJ, Klomparens KL. 1992. The ultrastructure of ascosporo-genesis in freeze-substituted Thelebolus crustaceus: enveloping membrane system and ascospore initial development. Can. J. Bot. 70:1669-1683.
22. Davis RL, de Serres D. 1970. Genetic and microbial research techniques for Neurospora crassa. Methods Enzymol. 27A:79-143.
23. Di Tommasao P, et al. 2011. T-Coffee: a Web server for the multiple sequence alignment of protein and RNA sequences using structural information and homology extension. Nucleic Acids Res. 39:W13-W17. doi: 10.1093/nar/gkr245.
24. Erdman SE, Lin L, Malczynski M, Snyder M. 1998. Pheromone regulated genes required for yeast mating differentiation. J. Cell Biol. 140:461-483.
25. Fairhead C, Thierry A, Denis F, Eck M, Dujon B. 1998. 'Mass-murder' of ORFs from three regions of chromosome XI from Saccharomyces cerevisiae. Gene 223:33-46.
26. Fairhead C, Llorente B, Denis F, Soler M, Dujon B. 1996. New vectors for combinatorial deletions in yeast chromosomes and for gap-repair cloning using 'split-marker' recombination. Yeast 12:1439-1457.
27. Fischer M, et al. 1997. The Saccharomyces cerevisiae CCH1 gene is involved in calcium influx and mating. FEBS Lett. 419:259-262.
28. Furuse M. 2010. Claudins, tight junctions, and the paracellular barrier. Curr. Top. Membr. 65:1-19.
29. Gaffoor I, et al. 2005. Analysis of the polyketide synthase genes in the filamentous fungus Gibberella zeae (anamorph Fusarium graminearum). Eukaryot. Cell 4:1926-1933.
30. Glass NL, et al. 1988. DNAs of the two mating-type alleles of Neurospora crassa are highly dissimilar. Science 241:570-573.
31. Glücksman E, et al. 2011. The novel marine gliding zooflagellate genus Mantamonas (Mantamonadida ord. n.: Apusozoa). Protist 162:207-221.
32. Gouy M, Guindon S, Gascuel O. 2010. SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol. Biol. Evol. 27:221-224.
33. Grey AC, Jacobs MD, Gonen T, Kistler J, Donaldson PJ. 2003. Insertion of MP20 into lens fibre cell plasma membranes correlates with the formation of an extracellular diffusion barrier. Exp. Eye Res. 77:567-574.
34. Groppi S, Belotti F, Brandão RL, Martegania E, Tisi R. 2011. Glucose-induced calcium influx in budding yeast involves a novel calcium transport system and can activate calcineurin. Cell Calcium 49:376-386.
35. Hallen H, Trail F. 2008. The L-type calcium ion channel Cch1 affects ascospore discharge and mycelial growth in the filamentous fungus Gibberella zeae (anamorph Fusarium graminearum). Eukaryot. Cell 7:415-424.
36. 2+in fungal cells during ER stress. J. Biol. Chem. 285:10951-10958.
37. Hung CY, Wells K. 1977. The behavior of the nucleolus during nuclear divisions in the asci of Pyronema domesticum. Mycologia 69:685-692.
38. 2+influx and mating. Mol. Cell. Biol. 14:8259-8271.
39. James TY, et al. 2006. A molecular phylogeny of the flagellated fungi (Chytridiomycota) and description of a new phylum (Blastocladiomycota). Mycologia 98:860-871.
40. Lew RR, Abbas Z, Anderca M, Free S. 2008. Phenotype of a mechanosensitive channel mutant, mid-1, in a filamentous fungus, Neurospora crassa. Eukaryot. Cell 7:647-655.
41. Li H, Durbin R. 2009. Fast and accurate short read alignment with Burrows-Wheeler Transform. Bioinformatics 25:1754-1760.
42. 2+in yeast. Mol. Cell. Biol. 20:6686-6694.
43. Lockhart SR, et al. 2002. In Candida albicans, white-opaque switchers are homozygous for mating type. Genetics 162:737-745.
44. Marchler-Bauer A, et al. 2011. CDD: a conserved domain database for the functional annotation of proteins. Nucleic Acids Res. 39:D225-D229. doi: 10.1093/nar/gkq1189.
45. 2+influx system revealed through a genome-wide screen in yeast. J. Biol. Chem. 286:10744-10754.
46. Matter K, Balda MS. 2003. Signalling to and from tight junctions. Nat. Rev. Mol. Cell. Biol. 4:225-237.
47. Metzenberg RL, Glass NL. 1990. Mating type and mating strategies in Neurospora. Bioessays 12:53-59.
48. 2+signaling and calcium binding chaperones of the endoplasmic reticulum. Cell Calcium 32:269-278.
49. 2+influx and cell fusion during mating of Saccharomyces cerevisiae. J. Biol. Chem. 278:38461-38469.
50. 2+uptake and exacerbates the cdc1(Ts) growth defect. Mol. Cell. Biol. 17:6339-6347.
51. 2+channel Cch1pMid1p is essential for tolerance to cold stress and iron toxicity. FEBS Lett. 579:5697-5703.
52. Perkins DD. 2006. How to convert wild-type spreading growth to colonial. Fungal Genetics Stock Center, Kansas City, MO. http://www.fgsc.net/neurospora/NeurosporaProtocolGuide.htm. Accessed March 2011.
53. R Development Core Team. 2010. R: a language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria. http://www.R-project.org/.
54. Read ND, Beckett A. 1996. Ascus and ascospore morphogenesis. Mycol. Res. 100:1281-1314.
55. Rokas A. 2008. The origins of multicellularity and the early history of the genetic toolkit for animal development. Annu. Rev. Genet. 42:235-251.
56. Rosenthal R, et al. 2010. Claudin-2, a component of the tight junction, forms a paracellular water channel. J. Cell Sci. 129:1919-1921.
57. Ruiz-Trillo I, Roger AJ, Burger G, Gray MW, Lang BF. 2008. A phylogenomic investigation into the origin of metazoa. Mol. Biol. Evol. 25: 664-672.
58. Shear CL, Dodge BO. 1927. Life histories and heterothallism of the red bread-mold fungi of the Monilia sitophila group. J. Agric. Res. 34:1019-1042.
59. Sikhakolli UR, et al. 14 June 2012, posting date. Transcriptome analyses during fruiting body formation in Fusarium graminearum and Fusarium verticillioides reflect species life history and ecology. Fungal Genet. Biol. doi:10.1016/j.fgb.2012.05.009.
60. Strickland WN, Perkins DD. 1973. Rehydrating ascospores to improve germination. Neurospora Newsl. 20:34-35.
61. Thom C, Church MB. 1926. The aspergilli. Williams & Wilkins Co, Baltimore, MD.
62. Trail F, Common R. 2000. Perithecial development by Gibberella zeae: a light microscopy study. Mycologia 92:130-138.
63. Trail F, Xu H, Loranger R, Gadoury D. 2002. Physiological and environmental aspects of ascospore discharge in Gibberella zeae (anamorph Fusarium graminearum). Mycologia 94:181-189.
64. Trail F, Gaffoor I, Vogel S. 2005. Ejection mechanics and trajectory of the ascospores of Gibberella zeae (anamorph Fusarium graminearum). Fungal Genet. Biol. 42:528-533.
65. Tsukita S, Furuse M, Itoh M. 1999. Structural and signalling molecules come together at tight junctions. Curr. Opin. Cell Biol. 11:628-633.
66. Viladevall L, et al. 2004. Characterization of the calcium-mediated response to alkaline stress in Saccharomyces cerevisiae. J. Biol. Chem. 279: 43614-43624.
67. Waterhouse AM, Procter JB, Martin DM, Clamp M, Barton GJ. 2009. Jalview version 2-a multiple sequence alignment editor and analysis workbench. Bioinfomatics. 25:1189-1191.
68. Wu CG, Kimbrough JW. 2001. Ascosporogenesis in Tarzetta (Otideaceae, Pezizales). Int. J. Plant Sci. 162:1075-1080.
69. Wu TS, Linz JE. 1993. Recombinational inactivation of the gene encoding nitrate reductase in Aspergillus parasiticus. Appl. Environ. Microbiol. 59: 2998-3002.
70. Wu VM, Schulte J, Hirschi A, Tepass U, Beitel GJ. 2004. Sinuous is a Drosophila claudin required for septate junction organization and epithelial tube size control. J. Cell Biol. 164:313-323.
71. Yang M, et al. 2011. Fig1 facilitates calcium influx and localizes to membranes destined to undergo fusion during mating in Candida albicans. Eukaryot. Cell 10:435-444.
72. Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.
73. Zerbino DR, McEwen GK, Margulies EH, Birney E. 2009. Pebble and rock band: heuristic resolution of repeats and scaffolding in the Velvet short-read de novo assembler. PLoS One 4:e8407. doi:10.1371/journal.pone.0008407.
74. Zhang NN, et al. 2006. Multiple signaling pathways regulate yeast cell death during the response to mating pheromones. Mol. Biol. Cell 17: 3409-3422.