메뉴 건너뛰기




Volumn 7, Issue 8, 2012, Pages

Human Immunodeficiency Virus Type-1 (HIV-1) Continues to Evolve in Presence of Broadly Neutralizing Antibodies More than Ten Years after Infection

Author keywords

[No Author keywords available]

Indexed keywords

NEUTRALIZING ANTIBODY; VIRUS ENVELOPE PROTEIN;

EID: 84865592592     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0044163     Document Type: Article
Times cited : (14)

References (83)
  • 1
    • 84879107855 scopus 로고    scopus 로고
    • B-cell depletion reveals a role for antibodies in the control of chronic HIV-1 infection
    • 10.1038/ncomms1100
    • Huang K-HG, Bonsall D, Katzourakis A, Thomson EC, Fidler SJ, et al. (2010) B-cell depletion reveals a role for antibodies in the control of chronic HIV-1 infection. Nat Commun 1: 102 doi:10.1038/ncomms1100.
    • (2010) Nat Commun , vol.1 , pp. 102
    • Huang, K.-H.G.1    Bonsall, D.2    Katzourakis, A.3    Thomson, E.C.4    Fidler, S.J.5
  • 2
    • 34447278063 scopus 로고    scopus 로고
    • Positive in vivo selection of the HIV-1 envelope protein gp120 occurs at surface-exposed regions
    • 10.1086/518935
    • Joos B, Fischer M, Schweizer A, Kuster H, Böni J, et al. (2007) Positive in vivo selection of the HIV-1 envelope protein gp120 occurs at surface-exposed regions. J Infect Dis 196: 313-320 doi:10.1086/518935.
    • (2007) J Infect Dis , vol.196 , pp. 313-320
    • Joos, B.1    Fischer, M.2    Schweizer, A.3    Kuster, H.4    Böni, J.5
  • 3
    • 58149487646 scopus 로고    scopus 로고
    • Continuous viral escape and selection by autologous neutralizing antibodies in drug-naive human immunodeficiency virus controllers
    • JVI.01328-08 [pii] 10.1128/JVI.01328-08
    • Mahalanabis M, Jayaraman P, Miura T, Pereyra F, Chester EM, et al. (2009) Continuous viral escape and selection by autologous neutralizing antibodies in drug-naive human immunodeficiency virus controllers. J Virol 83: 662-672 doi:JVI.01328-08 [pii] 10.1128/JVI.01328-08.
    • (2009) J Virol , vol.83 , pp. 662-672
    • Mahalanabis, M.1    Jayaraman, P.2    Miura, T.3    Pereyra, F.4    Chester, E.M.5
  • 4
    • 72949118295 scopus 로고    scopus 로고
    • Prevalence of cross-reactive HIV-1-neutralizing activity in HIV-1-infected patients with rapid or slow disease progression
    • 10.1097/QAD.0b013e32833243e7
    • van Gils MJ, Euler Z, Schweighardt B, Wrin T, Schuitemaker H, (2009) Prevalence of cross-reactive HIV-1-neutralizing activity in HIV-1-infected patients with rapid or slow disease progression. AIDS 23: 2405-2414 doi:10.1097/QAD.0b013e32833243e7.
    • (2009) AIDS , vol.23 , pp. 2405-2414
    • van Gils, M.J.1    Euler, Z.2    Schweighardt, B.3    Wrin, T.4    Schuitemaker, H.5
  • 5
    • 0033793926 scopus 로고    scopus 로고
    • Passive immunity in prevention and treatment of infectious diseases
    • Keller MA, Stiehm ER, (2000) Passive immunity in prevention and treatment of infectious diseases. Clin Microbiol Rev 13: 602-614.
    • (2000) Clin Microbiol Rev , vol.13 , pp. 602-614
    • Keller, M.A.1    Stiehm, E.R.2
  • 6
    • 36849087921 scopus 로고    scopus 로고
    • The growth and potential of human antiviral monoclonal antibody therapeutics
    • 10.1038/nbt1363
    • Marasco WA, Sui J, (2007) The growth and potential of human antiviral monoclonal antibody therapeutics. Nat Biotechnol 25: 1421-1434 doi:10.1038/nbt1363.
    • (2007) Nat Biotechnol , vol.25 , pp. 1421-1434
    • Marasco, W.A.1    Sui, J.2
  • 7
    • 77952311370 scopus 로고    scopus 로고
    • The role of antibodies in HIV vaccines
    • 10.1146/annurev-immunol-030409-101256
    • Mascola JR, Montefiori DC, (2010) The role of antibodies in HIV vaccines. Annu Rev Immunol 28: 413-444 doi:10.1146/annurev-immunol-030409-101256.
    • (2010) Annu Rev Immunol , vol.28 , pp. 413-444
    • Mascola, J.R.1    Montefiori, D.C.2
  • 8
    • 18144429071 scopus 로고    scopus 로고
    • Characterization of human immunodeficiency virus type 1 (HIV-1) envelope variation and neutralizing antibody responses during transmission of HIV-1 subtype B
    • 10.1128/JVI.79.10.6523-6527.2005
    • Frost SDW, Liu Y, Pond SLK, Chappey C, Wrin T, et al. (2005) Characterization of human immunodeficiency virus type 1 (HIV-1) envelope variation and neutralizing antibody responses during transmission of HIV-1 subtype B. J Virol. 79: 6523-6527 doi:10.1128/JVI.79.10.6523-6527.2005.
    • (2005) J Virol , vol.79 , pp. 6523-6527
    • Frost, S.D.W.1    Liu, Y.2    Pond, S.L.K.3    Chappey, C.4    Wrin, T.5
  • 9
    • 0037389643 scopus 로고    scopus 로고
    • Rapid evolution of the neutralizing antibody response to HIV type 1 infection
    • 10.1073/pnas.0630530100 0630530100 [pii]
    • Richman DD, Wrin T, Little SJ, Petropoulos CJ, (2003) Rapid evolution of the neutralizing antibody response to HIV type 1 infection. Proc Natl Acad Sci U S A 100: 4144-4149 doi:10.1073/pnas.0630530100 0630530100 [pii].
    • (2003) Proc Natl Acad Sci U S A , vol.100 , pp. 4144-4149
    • Richman, D.D.1    Wrin, T.2    Little, S.J.3    Petropoulos, C.J.4
  • 10
    • 0037456827 scopus 로고    scopus 로고
    • Antibody neutralization and escape by HIV-1
    • 10.1038/nature01470 nature01470 [pii]
    • Wei X, Decker JM, Wang S, Hui H, Kappes JC, et al. (2003) Antibody neutralization and escape by HIV-1. Nature 422: 307-312 doi:10.1038/nature01470 nature01470 [pii].
    • (2003) Nature , vol.422 , pp. 307-312
    • Wei, X.1    Decker, J.M.2    Wang, S.3    Hui, H.4    Kappes, J.C.5
  • 11
    • 79955389756 scopus 로고    scopus 로고
    • The neutralization breadth of HIV-1 develops incrementally over four years and is associated with CD4+ T cell decline and high viral load during acute infection
    • 10.1128/JVI.00198-11
    • Gray ES, Madiga MC, Hermanus T, Moore PL, Wibmer CK, et al. (2011) The neutralization breadth of HIV-1 develops incrementally over four years and is associated with CD4+ T cell decline and high viral load during acute infection. J Virol 85: 4828-4840 doi:10.1128/JVI.00198-11.
    • (2011) J Virol , vol.85 , pp. 4828-4840
    • Gray, E.S.1    Madiga, M.C.2    Hermanus, T.3    Moore, P.L.4    Wibmer, C.K.5
  • 12
    • 79551518897 scopus 로고    scopus 로고
    • Characteristics of the earliest cross-neutralizing antibody response to HIV-1
    • 10.1371/journal.ppat.1001251
    • Mikell I, Sather DN, Kalams SA, Altfeld M, Alter G, et al. (2011) Characteristics of the earliest cross-neutralizing antibody response to HIV-1. PLoS Pathog 7: e1001251 doi:10.1371/journal.ppat.1001251.
    • (2011) PLoS Pathog , vol.7
    • Mikell, I.1    Sather, D.N.2    Kalams, S.A.3    Altfeld, M.4    Alter, G.5
  • 13
    • 33748896583 scopus 로고    scopus 로고
    • Antibodies to conserved epitopes of the HIV-1 envelope in sera from long-term non-progressors: prevalence and association with neutralizing activity
    • 10.1097/01.aids.0000247113.43714.5e 00002030-200610030-00004 [pii]
    • Braibant M, Brunet S, Costagliola D, Rouzioux C, Agut H, et al. (2006) Antibodies to conserved epitopes of the HIV-1 envelope in sera from long-term non-progressors: prevalence and association with neutralizing activity. AIDS 20: 1923-1930 doi:10.1097/01.aids.0000247113.43714.5e 00002030-200610030-00004 [pii].
    • (2006) AIDS , vol.20 , pp. 1923-1930
    • Braibant, M.1    Brunet, S.2    Costagliola, D.3    Rouzioux, C.4    Agut, H.5
  • 14
    • 77749306129 scopus 로고    scopus 로고
    • Cross-reactive neutralizing humoral immunity does not protect from HIV type 1 disease progression
    • 10.1086/651144
    • Euler Z, van Gils MJ, Bunnik EM, Phung P, Schweighardt B, et al. (2010) Cross-reactive neutralizing humoral immunity does not protect from HIV type 1 disease progression. J Infect Dis 201: 1045-1053 doi:10.1086/651144.
    • (2010) J Infect Dis , vol.201 , pp. 1045-1053
    • Euler, Z.1    van Gils, M.J.2    Bunnik, E.M.3    Phung, P.4    Schweighardt, B.5
  • 15
    • 67650453747 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 elite neutralizers: individuals with broad and potent neutralizing activity identified by using a high-throughput neutralization assay together with an analytical selection algorithm
    • 10.1128/JVI.00110-09
    • Simek MD, Rida W, Priddy FH, Pung P, Carrow E, et al. (2009) Human immunodeficiency virus type 1 elite neutralizers: individuals with broad and potent neutralizing activity identified by using a high-throughput neutralization assay together with an analytical selection algorithm. J Virol 83: 7337-7348 doi:10.1128/JVI.00110-09.
    • (2009) J Virol , vol.83 , pp. 7337-7348
    • Simek, M.D.1    Rida, W.2    Priddy, F.H.3    Pung, P.4    Carrow, E.5
  • 16
    • 77953543379 scopus 로고    scopus 로고
    • Rational antibody-based HIV-1 vaccine design: current approaches and future directions
    • 10.1016/j.coi.2010.02.012
    • Walker LM, Burton DR, (2010) Rational antibody-based HIV-1 vaccine design: current approaches and future directions. Curr Opin Immunol 22: 358-366 doi:10.1016/j.coi.2010.02.012.
    • (2010) Curr Opin Immunol , vol.22 , pp. 358-366
    • Walker, L.M.1    Burton, D.R.2
  • 17
    • 77954920017 scopus 로고    scopus 로고
    • Rational Design of Envelope Identifies Broadly Neutralizing Human Monoclonal Antibodies to HIV-1
    • Available. Accessed 11 July 2010
    • Wu X, Yang Z-Y, Li Y, Hogerkorp C-M, Schief WR,et al. (2010) Rational Design of Envelope Identifies Broadly Neutralizing Human Monoclonal Antibodies to HIV-1. Science. Available:http://www.ncbi.nlm.nih.gov/pubmed/20616233. Accessed 11 July 2010.
    • (2010) Science
    • Wu, X.1    Yang, Z.-Y.2    Li, Y.3    Hogerkorp, C.-M.4    Schief, W.R.5
  • 18
    • 80052938385 scopus 로고    scopus 로고
    • Analysis of a clonal lineage of HIV-1 envelope V2/V3 conformational epitope-specific broadly neutralizing antibodies and their inferred unmutated common ancestors
    • 10.1128/JVI.05045-11
    • Bonsignori M, Hwang K-K, Chen X, Tsao C-Y, Morris L, et al. (2011) Analysis of a clonal lineage of HIV-1 envelope V2/V3 conformational epitope-specific broadly neutralizing antibodies and their inferred unmutated common ancestors. J Virol 85: 9998-10009 doi:10.1128/JVI.05045-11.
    • (2011) J Virol , vol.85 , pp. 9998-10009
    • Bonsignori, M.1    Hwang, K.-K.2    Chen, X.3    Tsao, C.-Y.4    Morris, L.5
  • 19
    • 80053132436 scopus 로고    scopus 로고
    • Broad neutralization coverage of HIV by multiple highly potent antibodies
    • 10.1038/nature10373
    • Walker LM, Huber M, Doores KJ, Falkowska E, Pejchal R, et al. (2011) Broad neutralization coverage of HIV by multiple highly potent antibodies. Nature 477: 466-470 doi:10.1038/nature10373.
    • (2011) Nature , vol.477 , pp. 466-470
    • Walker, L.M.1    Huber, M.2    Doores, K.J.3    Falkowska, E.4    Pejchal, R.5
  • 20
    • 79960585840 scopus 로고    scopus 로고
    • Limited or no protection by weakly or nonneutralizing antibodies against vaginal SHIV challenge of macaques compared with a strongly neutralizing antibody
    • 10.1073/pnas.1103012108
    • Burton DR, Hessell AJ, Keele BF, Klasse PJ, Ketas TA, et al. (2011) Limited or no protection by weakly or nonneutralizing antibodies against vaginal SHIV challenge of macaques compared with a strongly neutralizing antibody. Proc Natl Acad Sci USA 108: 11181-11186 doi:10.1073/pnas.1103012108.
    • (2011) Proc Natl Acad Sci USA , vol.108 , pp. 11181-11186
    • Burton, D.R.1    Hessell, A.J.2    Keele, B.F.3    Klasse, P.J.4    Ketas, T.A.5
  • 21
    • 0032947286 scopus 로고    scopus 로고
    • Protection of Macaques against pathogenic simian/human immunodeficiency virus 89.6PD by passive transfer of neutralizing antibodies
    • Mascola JR, Lewis MG, Stiegler G, Harris D, VanCott TC, et al. (1999) Protection of Macaques against pathogenic simian/human immunodeficiency virus 89.6PD by passive transfer of neutralizing antibodies. J Virol 73: 4009-4018.
    • (1999) J Virol , vol.73 , pp. 4009-4018
    • Mascola, J.R.1    Lewis, M.G.2    Stiegler, G.3    Harris, D.4    VanCott, T.C.5
  • 22
    • 2942534479 scopus 로고    scopus 로고
    • Complete protection of neonatal rhesus macaques against oral exposure to pathogenic simian-human immunodeficiency virus by human anti-HIV monoclonal antibodies
    • 10.1086/420833 JID31831 [pii]
    • Ferrantelli F, Rasmussen RA, Buckley KA, Li PL, Wang T, et al. (2004) Complete protection of neonatal rhesus macaques against oral exposure to pathogenic simian-human immunodeficiency virus by human anti-HIV monoclonal antibodies. J Infect Dis 189: 2167-2173 doi:10.1086/420833 JID31831 [pii].
    • (2004) J Infect Dis , vol.189 , pp. 2167-2173
    • Ferrantelli, F.1    Rasmussen, R.A.2    Buckley, K.A.3    Li, P.L.4    Wang, T.5
  • 23
    • 68349160853 scopus 로고    scopus 로고
    • Effective, low-titer antibody protection against low-dose repeated mucosal SHIV challenge in macaques
    • 10.1038/nm.1974
    • Hessell AJ, Poignard P, Hunter M, Hangartner L, Tehrani DM, et al. (2009) Effective, low-titer antibody protection against low-dose repeated mucosal SHIV challenge in macaques. Nat Med 15: 951-954 doi:10.1038/nm.1974.
    • (2009) Nat Med , vol.15 , pp. 951-954
    • Hessell, A.J.1    Poignard, P.2    Hunter, M.3    Hangartner, L.4    Tehrani, D.M.5
  • 24
    • 78349299783 scopus 로고    scopus 로고
    • Genetic Signatures in the Envelope Glycoproteins of HIV-1 that Associate with Broadly Neutralizing Antibodies
    • Available Accessed 17 October 2010
    • Gnanakaran S, Daniels MG, Bhattacharya T, Lapedes AS, Sethi A, et al. (2010) Genetic Signatures in the Envelope Glycoproteins of HIV-1 that Associate with Broadly Neutralizing Antibodies. PLoS Comput Biol 6. Available:http://www.ncbi.nlm.nih.gov/pubmed/20949103. Accessed 17 October 2010.
    • (2010) PLoS Comput Biol 6
    • Gnanakaran, S.1    Daniels, M.G.2    Bhattacharya, T.3    Lapedes, A.S.4    Sethi, A.5
  • 25
    • 69149083668 scopus 로고    scopus 로고
    • Neutralizing antibodies generated during natural HIV-1 infection: good news for an HIV-1 vaccine?
    • 10.1038/nm.1949
    • Stamatatos L, Morris L, Burton DR, Mascola JR, (2009) Neutralizing antibodies generated during natural HIV-1 infection: good news for an HIV-1 vaccine? Nat Med 15: 866-870 doi:10.1038/nm.1949.
    • (2009) Nat Med , vol.15 , pp. 866-870
    • Stamatatos, L.1    Morris, L.2    Burton, D.R.3    Mascola, J.R.4
  • 26
    • 7644239787 scopus 로고    scopus 로고
    • Evolutionary dynamics of the glycan shield of the human immunodeficiency virus envelope during natural infection and implications for exposure of the 2G12 epitope
    • 10.1128/JVI.78.22.12625-12637.2004
    • Dacheux L, Moreau A, Ataman-Onal Y, Biron F, Verrier B, et al. (2004) Evolutionary dynamics of the glycan shield of the human immunodeficiency virus envelope during natural infection and implications for exposure of the 2G12 epitope. J Virol 78: 12625-12637 doi:10.1128/JVI.78.22.12625-12637.2004.
    • (2004) J Virol , vol.78 , pp. 12625-12637
    • Dacheux, L.1    Moreau, A.2    Ataman-Onal, Y.3    Biron, F.4    Verrier, B.5
  • 27
    • 70349686331 scopus 로고    scopus 로고
    • Limited neutralizing antibody specificities drive neutralization escape in early HIV-1 subtype C infection
    • 10.1371/journal.ppat.1000598
    • Moore PL, Ranchobe N, Lambson BE, Gray ES, Cave E, et al. (2009) Limited neutralizing antibody specificities drive neutralization escape in early HIV-1 subtype C infection. PLoS Pathog 5: e1000598 doi:10.1371/journal.ppat.1000598.
    • (2009) PLoS Pathog , vol.5
    • Moore, P.L.1    Ranchobe, N.2    Lambson, B.E.3    Gray, E.S.4    Cave, E.5
  • 28
    • 70349695689 scopus 로고    scopus 로고
    • Escape from autologous neutralizing antibodies in acute/early subtype C HIV-1 infection requires multiple pathways
    • 10.1371/journal.ppat.1000594
    • Rong R, Li B, Lynch RM, Haaland RE, Murphy MK, et al. (2009) Escape from autologous neutralizing antibodies in acute/early subtype C HIV-1 infection requires multiple pathways. PLoS Pathog 5: e1000594 doi:10.1371/journal.ppat.1000594.
    • (2009) PLoS Pathog , vol.5
    • Rong, R.1    Li, B.2    Lynch, R.M.3    Haaland, R.E.4    Murphy, M.K.5
  • 29
    • 0041571679 scopus 로고    scopus 로고
    • Adaptation in the env gene of HIV-1 and evolutionary theories of disease progression
    • 10.1093/molbev/msg144
    • Williamson S, (2003) Adaptation in the env gene of HIV-1 and evolutionary theories of disease progression. Mol Biol Evol 20: 1318-1325 doi:10.1093/molbev/msg144.
    • (2003) Mol Biol Evol , vol.20 , pp. 1318-1325
    • Williamson, S.1
  • 30
    • 14544287462 scopus 로고    scopus 로고
    • A statistical characterization of consistent patterns of human immunodeficiency virus evolution within infected patients
    • 10.1093/molbev/msi029
    • Williamson S, Perry SM, Bustamante CD, Orive ME, Stearns MN, et al. (2005) A statistical characterization of consistent patterns of human immunodeficiency virus evolution within infected patients. Mol Biol Evol 22: 456-468 doi:10.1093/molbev/msi029.
    • (2005) Mol Biol Evol , vol.22 , pp. 456-468
    • Williamson, S.1    Perry, S.M.2    Bustamante, C.D.3    Orive, M.E.4    Stearns, M.N.5
  • 32
    • 12144289425 scopus 로고    scopus 로고
    • Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission
    • 10.1126/science.1093137
    • Derdeyn CA, Decker JM, Bibollet-Ruche F, Mokili JL, Muldoon M, et al. (2004) Envelope-constrained neutralization-sensitive HIV-1 after heterosexual transmission. Science 303: 2019-2022 doi:10.1126/science.1093137.
    • (2004) Science , vol.303 , pp. 2019-2022
    • Derdeyn, C.A.1    Decker, J.M.2    Bibollet-Ruche, F.3    Mokili, J.L.4    Muldoon, M.5
  • 33
    • 44649102135 scopus 로고    scopus 로고
    • Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection
    • 10.1073/pnas.0802203105
    • Keele BF, Giorgi EE, Salazar-Gonzalez JF, Decker JM, Pham KT, et al. (2008) Identification and characterization of transmitted and early founder virus envelopes in primary HIV-1 infection. Proc Natl Acad Sci USA 105: 7552-7557 doi:10.1073/pnas.0802203105.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 7552-7557
    • Keele, B.F.1    Giorgi, E.E.2    Salazar-Gonzalez, J.F.3    Decker, J.M.4    Pham, K.T.5
  • 34
    • 41949124934 scopus 로고    scopus 로고
    • Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing
    • 10.1128/JVI.02660-07
    • Salazar-Gonzalez JF, Bailes E, Pham KT, Salazar MG, Guffey MB, et al. (2008) Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing. J Virol 82: 3952-3970 doi:10.1128/JVI.02660-07.
    • (2008) J Virol , vol.82 , pp. 3952-3970
    • Salazar-Gonzalez, J.F.1    Bailes, E.2    Pham, K.T.3    Salazar, M.G.4    Guffey, M.B.5
  • 35
    • 66049139947 scopus 로고    scopus 로고
    • Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection
    • 10.1084/jem.20090378
    • Salazar-Gonzalez JF, Salazar MG, Keele BF, Learn GH, Giorgi EE, et al. (2009) Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection. J Exp Med 206: 1273-1289 doi:10.1084/jem.20090378.
    • (2009) J Exp Med , vol.206 , pp. 1273-1289
    • Salazar-Gonzalez, J.F.1    Salazar, M.G.2    Keele, B.F.3    Learn, G.H.4    Giorgi, E.E.5
  • 36
    • 69549114407 scopus 로고    scopus 로고
    • Neutralizing antibodies against HIV-1: can we elicit them with vaccines and how much do we need?
    • 10.1097/COH.0b013e32832f4a4d
    • Montefiori DC, Mascola JR, (2009) Neutralizing antibodies against HIV-1: can we elicit them with vaccines and how much do we need? Curr Opin HIV AIDS 4: 347-351 doi:10.1097/COH.0b013e32832f4a4d.
    • (2009) Curr Opin HIV AIDS , vol.4 , pp. 347-351
    • Montefiori, D.C.1    Mascola, J.R.2
  • 37
    • 49149118421 scopus 로고    scopus 로고
    • Autologous neutralizing humoral immunity and evolution of the viral envelope in the course of subtype B human immunodeficiency virus type 1 infection
    • JVI.00757-08 [pii] 10.1128/JVI.00757-08
    • Bunnik EM, Pisas L, van Nuenen AC, Schuitemaker H, (2008) Autologous neutralizing humoral immunity and evolution of the viral envelope in the course of subtype B human immunodeficiency virus type 1 infection. J Virol 82: 7932-7941 doi:JVI.00757-08 [pii] 10.1128/JVI.00757-08.
    • (2008) J Virol , vol.82 , pp. 7932-7941
    • Bunnik, E.M.1    Pisas, L.2    van Nuenen, A.C.3    Schuitemaker, H.4
  • 38
    • 67650080603 scopus 로고    scopus 로고
    • Changing sensitivity to broadly neutralizing antibodies b12, 2G12, 2F5, and 4E10 of primary subtype B human immunodeficiency virus type 1 variants in the natural course of infection
    • 10.1016/j.virol.2009.05.028
    • Bunnik EM, van Gils MJ, Lobbrecht MSD, Pisas L, van Nuenen AC, et al. (2009) Changing sensitivity to broadly neutralizing antibodies b12, 2G12, 2F5, and 4E10 of primary subtype B human immunodeficiency virus type 1 variants in the natural course of infection. Virology 390: 348-355 doi:10.1016/j.virol.2009.05.028.
    • (2009) Virology , vol.390 , pp. 348-355
    • Bunnik, E.M.1    van Gils, M.J.2    Lobbrecht, M.S.D.3    Pisas, L.4    van Nuenen, A.C.5
  • 39
    • 33744904454 scopus 로고    scopus 로고
    • Neutralizing antibody responses against autologous and heterologous viruses in acute versus chronic human immunodeficiency virus (HIV) infection: evidence for a constraint on the ability of HIV to completely evade neutralizing antibody responses
    • 80/12/6155 [pii] 10.1128/JVI.00093-06
    • Deeks SG, Schweighardt B, Wrin T, Galovich J, Hoh R, et al. (2006) Neutralizing antibody responses against autologous and heterologous viruses in acute versus chronic human immunodeficiency virus (HIV) infection: evidence for a constraint on the ability of HIV to completely evade neutralizing antibody responses. J Virol 80: 6155-6164 doi:80/12/6155 [pii] 10.1128/JVI.00093-06.
    • (2006) J Virol , vol.80 , pp. 6155-6164
    • Deeks, S.G.1    Schweighardt, B.2    Wrin, T.3    Galovich, J.4    Hoh, R.5
  • 40
    • 42449128418 scopus 로고    scopus 로고
    • Characteristics of the env genes of HIV type 1 quasispecies in long-term nonprogressors with broadly neutralizing antibodies
    • 10.1097/QAI.0b013e318162cac2
    • Braibant M, Agut H, Rouzioux C, Costagliola D, Autran B, et al. (2008) Characteristics of the env genes of HIV type 1 quasispecies in long-term nonprogressors with broadly neutralizing antibodies. J Acquir Immune Defic Syndr 47: 274-284 doi:10.1097/QAI.0b013e318162cac2.
    • (2008) J Acquir Immune Defic Syndr , vol.47 , pp. 274-284
    • Braibant, M.1    Agut, H.2    Rouzioux, C.3    Costagliola, D.4    Autran, B.5
  • 41
    • 77955514287 scopus 로고    scopus 로고
    • Disease progression due to dual infection in an HLA-B57-positive asymptomatic long-term nonprogressor infected with a nef-defective HIV-1 strain
    • 10.1016/j.virol.2010.05.026
    • Braibant M, Xie J, Samri A, Agut H, Autran B, et al. (2010) Disease progression due to dual infection in an HLA-B57-positive asymptomatic long-term nonprogressor infected with a nef-defective HIV-1 strain. Virology 405: 81-92 doi:10.1016/j.virol.2010.05.026.
    • (2010) Virology , vol.405 , pp. 81-92
    • Braibant, M.1    Xie, J.2    Samri, A.3    Agut, H.4    Autran, B.5
  • 42
    • 79952602584 scopus 로고    scopus 로고
    • The V1V2 domain and an N-linked glycosylation site in the V3 loop of the HIV-1 envelope glycoprotein modulate neutralization sensitivity to the human broadly neutralizing antibody 2G12
    • 10.1128/JVI.02424-10
    • Chaillon A, Braibant M, Moreau T, Thenin S, Moreau A, et al. (2011) The V1V2 domain and an N-linked glycosylation site in the V3 loop of the HIV-1 envelope glycoprotein modulate neutralization sensitivity to the human broadly neutralizing antibody 2G12. J Virol 85: 3642-3648 doi:10.1128/JVI.02424-10.
    • (2011) J Virol , vol.85 , pp. 3642-3648
    • Chaillon, A.1    Braibant, M.2    Moreau, T.3    Thenin, S.4    Moreau, A.5
  • 43
    • 0028842207 scopus 로고
    • Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes
    • S0042-6822(85)71016-1 [pii] 10.1006/viro.1995.1016
    • Connor RI, Chen BK, Choe S, Landau NR, (1995) Vpr is required for efficient replication of human immunodeficiency virus type-1 in mononuclear phagocytes. Virology 206: 935-944 doi:S0042-6822(85)71016-1 [pii] 10.1006/viro.1995.1016.
    • (1995) Virology , vol.206 , pp. 935-944
    • Connor, R.I.1    Chen, B.K.2    Choe, S.3    Landau, N.R.4
  • 44
    • 60349089294 scopus 로고    scopus 로고
    • Measuring HIV neutralization in a luciferase reporter gene assay
    • 10.1007/978-1-59745-170-3_26
    • Montefiori DC, (2009) Measuring HIV neutralization in a luciferase reporter gene assay. Methods Mol Biol 485: 395-405 doi:10.1007/978-1-59745-170-3_26.
    • (2009) Methods Mol Biol , vol.485 , pp. 395-405
    • Montefiori, D.C.1
  • 45
    • 0742290081 scopus 로고    scopus 로고
    • Interclade neutralization and enhancement of human immunodeficiency virus type 1 identified by an assay using HeLa cells expressing both CD4 receptor and CXCR4/CCR5 coreceptors
    • JID30844 [pii] 10.1086/380099
    • Barin F, Brunet S, Brand D, Moog C, Peyre R, et al. (2004) Interclade neutralization and enhancement of human immunodeficiency virus type 1 identified by an assay using HeLa cells expressing both CD4 receptor and CXCR4/CCR5 coreceptors. J Infect Dis 189: 322-327 doi:JID30844 [pii] 10.1086/380099.
    • (2004) J Infect Dis , vol.189 , pp. 322-327
    • Barin, F.1    Brunet, S.2    Brand, D.3    Moog, C.4    Peyre, R.5
  • 46
    • 0031954686 scopus 로고    scopus 로고
    • Effects of CCR5 and CD4 cell surface concentrations on infections by macrophagetropic isolates of human immunodeficiency virus type 1
    • Platt EJ, Wehrly K, Kuhmann SE, Chesebro B, Kabat D, (1998) Effects of CCR5 and CD4 cell surface concentrations on infections by macrophagetropic isolates of human immunodeficiency virus type 1. J Virol 72: 2855-2864.
    • (1998) J Virol , vol.72 , pp. 2855-2864
    • Platt, E.J.1    Wehrly, K.2    Kuhmann, S.E.3    Chesebro, B.4    Kabat, D.5
  • 47
    • 0036090585 scopus 로고    scopus 로고
    • Emergence of resistant human immunodeficiency virus type 1 in patients receiving fusion inhibitor (T-20) monotherapy
    • Wei X, Decker JM, Liu H, Zhang Z, Arani RB, et al. (2002) Emergence of resistant human immunodeficiency virus type 1 in patients receiving fusion inhibitor (T-20) monotherapy. Antimicrob Agents Chemother 46: 1896-1905.
    • (2002) Antimicrob Agents Chemother , vol.46 , pp. 1896-1905
    • Wei, X.1    Decker, J.M.2    Liu, H.3    Zhang, Z.4    Arani, R.B.5
  • 48
    • 68049142320 scopus 로고    scopus 로고
    • Multiple alignment of DNA sequences with MAFFT
    • 10.1007/978-1-59745-251-9_3
    • Katoh K, Asimenos G, Toh H, (2009) Multiple alignment of DNA sequences with MAFFT. Methods Mol Biol 537: 39-64 doi:10.1007/978-1-59745-251-9_3.
    • (2009) Methods Mol Biol , vol.537 , pp. 39-64
    • Katoh, K.1    Asimenos, G.2    Toh, H.3
  • 49
    • 9744280420 scopus 로고    scopus 로고
    • Tracking global patterns of N-linked glycosylation site variation in highly variable viral glycoproteins: HIV, SIV, and HCV envelopes and influenza hemagglutinin
    • 10.1093/glycob/cwh106
    • Zhang M, Gaschen B, Blay W, Foley B, Haigwood N, et al. (2004) Tracking global patterns of N-linked glycosylation site variation in highly variable viral glycoproteins: HIV, SIV, and HCV envelopes and influenza hemagglutinin. Glycobiology 14: 1229-1246 doi:10.1093/glycob/cwh106.
    • (2004) Glycobiology , vol.14 , pp. 1229-1246
    • Zhang, M.1    Gaschen, B.2    Blay, W.3    Foley, B.4    Haigwood, N.5
  • 50
    • 17744396121 scopus 로고    scopus 로고
    • Not so different after all: a comparison of methods for detecting amino acid sites under selection
    • 10.1093/molbev/msi105
    • Kosakovsky Pond SL, Frost SDW, (2005) Not so different after all: a comparison of methods for detecting amino acid sites under selection. Mol Biol Evol 22: 1208-1222 doi:10.1093/molbev/msi105.
    • (2005) Mol Biol Evol , vol.22 , pp. 1208-1222
    • Kosakovsky Pond, S.L.1    Frost, S.D.W.2
  • 51
    • 33748770095 scopus 로고    scopus 로고
    • Automated phylogenetic detection of recombination using a genetic algorithm
    • 10.1093/molbev/msl051
    • Kosakovsky Pond SL, Posada D, Gravenor MB, Woelk CH, Frost SDW, (2006) Automated phylogenetic detection of recombination using a genetic algorithm. Mol Biol Evol 23: 1891-1901 doi:10.1093/molbev/msl051.
    • (2006) Mol Biol Evol , vol.23 , pp. 1891-1901
    • Kosakovsky Pond, S.L.1    Posada, D.2    Gravenor, M.B.3    Woelk, C.H.4    Frost, S.D.W.5
  • 52
    • 34547803197 scopus 로고    scopus 로고
    • PAML 4: phylogenetic analysis by maximum likelihood
    • 10.1093/molbev/msm088
    • Yang Z, (2007) PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol 24: 1586-1591 doi:10.1093/molbev/msm088.
    • (2007) Mol Biol Evol , vol.24 , pp. 1586-1591
    • Yang, Z.1
  • 53
    • 41549160713 scopus 로고    scopus 로고
    • Episodic sexual transmission of HIV revealed by molecular phylodynamics
    • 10.1371/journal.pmed.0050050
    • Lewis F, Hughes GJ, Rambaut A, Pozniak A, Leigh Brown AJ, (2008) Episodic sexual transmission of HIV revealed by molecular phylodynamics. PLoS Med 5: e50 doi:10.1371/journal.pmed.0050050.
    • (2008) PLoS Med , vol.5
    • Lewis, F.1    Hughes, G.J.2    Rambaut, A.3    Pozniak, A.4    Leigh Brown, A.J.5
  • 54
    • 74549125386 scopus 로고    scopus 로고
    • SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building
    • 10.1093/molbev/msp259
    • Gouy M, Guindon S, Gascuel O, (2010) SeaView Version 4: A Multiplatform Graphical User Interface for Sequence Alignment and Phylogenetic Tree Building. Molecular Biology and Evolution 27: 221-224 doi:10.1093/molbev/msp259.
    • (2010) Molecular Biology and Evolution , vol.27 , pp. 221-224
    • Gouy, M.1    Guindon, S.2    Gascuel, O.3
  • 55
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • 10.1186/1471-2148-7-214
    • Drummond AJ, Rambaut A, (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214 doi:10.1186/1471-2148-7-214.
    • (2007) BMC Evol Biol , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 56
    • 73949127978 scopus 로고    scopus 로고
    • Tiered categorization of a diverse panel of HIV-1 Env pseudoviruses for assessment of neutralizing antibodies
    • 10.1128/JVI.02108-09
    • Seaman MS, Janes H, Hawkins N, Grandpre LE, Devoy C, et al. (2010) Tiered categorization of a diverse panel of HIV-1 Env pseudoviruses for assessment of neutralizing antibodies. J Virol 84: 1439-1452 doi:10.1128/JVI.02108-09.
    • (2010) J Virol , vol.84 , pp. 1439-1452
    • Seaman, M.S.1    Janes, H.2    Hawkins, N.3    Grandpre, L.E.4    Devoy, C.5
  • 57
    • 77957189612 scopus 로고    scopus 로고
    • Antibody 2G12 recognizes di-mannose equivalently in domain- and nondomain-exchanged forms but only binds the HIV-1 glycan shield if domain exchanged
    • 10.1128/JVI.01110-10
    • Doores KJ, Fulton Z, Huber M, Wilson IA, Burton DR, (2010) Antibody 2G12 recognizes di-mannose equivalently in domain- and nondomain-exchanged forms but only binds the HIV-1 glycan shield if domain exchanged. J Virol 84: 10690-10699 doi:10.1128/JVI.01110-10.
    • (2010) J Virol , vol.84 , pp. 10690-10699
    • Doores, K.J.1    Fulton, Z.2    Huber, M.3    Wilson, I.A.4    Burton, D.R.5
  • 58
    • 83455254775 scopus 로고    scopus 로고
    • Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9
    • 10.1038/nature10696
    • McLellan JS, Pancera M, Carrico C, Gorman J, Julien J-P, et al. (2011) Structure of HIV-1 gp120 V1/V2 domain with broadly neutralizing antibody PG9. Nature 480: 336-343 doi:10.1038/nature10696.
    • (2011) Nature , vol.480 , pp. 336-343
    • McLellan, J.S.1    Pancera, M.2    Carrico, C.3    Gorman, J.4    Julien, J.-P.5
  • 59
    • 70349887757 scopus 로고    scopus 로고
    • Broad and potent neutralizing antibodies from an African donor reveal a new HIV-1 vaccine target
    • 1178746 [pii] 10.1126/science.1178746
    • Walker LM, Phogat SK, Chan-Hui PY, Wagner D, Phung P, et al. (2009) Broad and potent neutralizing antibodies from an African donor reveal a new HIV-1 vaccine target. Science 326: 285-289 doi:1178746 [pii] 10.1126/science.1178746.
    • (2009) Science , vol.326 , pp. 285-289
    • Walker, L.M.1    Phogat, S.K.2    Chan-Hui, P.Y.3    Wagner, D.4    Phung, P.5
  • 60
    • 0036637385 scopus 로고    scopus 로고
    • The mannose-dependent epitope for neutralizing antibody 2G12 on human immunodeficiency virus type 1 glycoprotein gp120
    • Sanders RW, Venturi M, Schiffner L, Kalyanaraman R, Katinger H, et al. (2002) The mannose-dependent epitope for neutralizing antibody 2G12 on human immunodeficiency virus type 1 glycoprotein gp120. J Virol 76: 7293-7305.
    • (2002) J Virol , vol.76 , pp. 7293-7305
    • Sanders, R.W.1    Venturi, M.2    Schiffner, L.3    Kalyanaraman, R.4    Katinger, H.5
  • 61
    • 18244422922 scopus 로고    scopus 로고
    • The broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2G12 recognizes a cluster of alpha1->2 mannose residues on the outer face of gp120
    • Scanlan CN, Pantophlet R, Wormald MR, Ollmann Saphire E, Stanfield R, et al. (2002) The broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2G12 recognizes a cluster of alpha1->2 mannose residues on the outer face of gp120. J Virol 76: 7306-7321.
    • (2002) J Virol , vol.76 , pp. 7306-7321
    • Scanlan, C.N.1    Pantophlet, R.2    Wormald, M.R.3    Ollmann Saphire, E.4    Stanfield, R.5
  • 62
    • 33847246314 scopus 로고    scopus 로고
    • Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics
    • 06-PLCB-RA-0364R2 [pii] 10.1371/journal.pcbi.0030029
    • Lemey P, Kosakovsky Pond SL, Drummond AJ, Pybus OG, Shapiro B, et al. (2007) Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics. PLoS Comput Biol 3: e29 doi:06-PLCB-RA-0364R2 [pii] 10.1371/journal.pcbi.0030029.
    • (2007) PLoS Comput Biol , vol.3
    • Lemey, P.1    Kosakovsky Pond, S.L.2    Drummond, A.J.3    Pybus, O.G.4    Shapiro, B.5
  • 63
    • 78651237643 scopus 로고    scopus 로고
    • HIV-1 envelope subregion length variation during disease progression
    • 10.1371/journal.ppat.1001228
    • Curlin ME, Zioni R, Hawes SE, Liu Y, Deng W, et al. (2010) HIV-1 envelope subregion length variation during disease progression. PLoS Pathog 6: e1001228 doi:10.1371/journal.ppat.1001228.
    • (2010) PLoS Pathog , vol.6
    • Curlin, M.E.1    Zioni, R.2    Hawes, S.E.3    Liu, Y.4    Deng, W.5
  • 64
    • 33748925430 scopus 로고    scopus 로고
    • Human immunodeficiency virus type 1 V1-V2 envelope loop sequences expand and add glycosylation sites over the course of infection, and these modifications affect antibody neutralization sensitivity
    • 10.1128/JVI.00141-06
    • Sagar M, Wu X, Lee S, Overbaugh J, (2006) Human immunodeficiency virus type 1 V1-V2 envelope loop sequences expand and add glycosylation sites over the course of infection, and these modifications affect antibody neutralization sensitivity. J Virol 80: 9586-9598 doi:10.1128/JVI.00141-06.
    • (2006) J Virol , vol.80 , pp. 9586-9598
    • Sagar, M.1    Wu, X.2    Lee, S.3    Overbaugh, J.4
  • 65
    • 77957901912 scopus 로고    scopus 로고
    • Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing
    • 10.1371/journal.pone.0012303
    • Fischer W, Ganusov VV, Giorgi EE, Hraber PT, Keele BF, et al. (2010) Transmission of single HIV-1 genomes and dynamics of early immune escape revealed by ultra-deep sequencing. PLoS ONE 5: e12303 doi:10.1371/journal.pone.0012303.
    • (2010) PLoS ONE , vol.5
    • Fischer, W.1    Ganusov, V.V.2    Giorgi, E.E.3    Hraber, P.T.4    Keele, B.F.5
  • 66
    • 67449147145 scopus 로고    scopus 로고
    • The first T cell response to transmitted/founder virus contributes to the control of acute viremia in HIV-1 infection
    • 10.1084/jem.20090365
    • Goonetilleke N, Liu MKP, Salazar-Gonzalez JF, Ferrari G, Giorgi E, et al. (2009) The first T cell response to transmitted/founder virus contributes to the control of acute viremia in HIV-1 infection. J Exp Med 206: 1253-1272 doi:10.1084/jem.20090365.
    • (2009) J Exp Med , vol.206 , pp. 1253-1272
    • Goonetilleke, N.1    Liu, M.K.P.2    Salazar-Gonzalez, J.F.3    Ferrari, G.4    Giorgi, E.5
  • 67
    • 79960419997 scopus 로고    scopus 로고
    • Demographic Processes Affect HIV-1 Evolution in Primary Infection before the Onset of Selective Processes
    • 10.1128/JVI.02697-10
    • Herbeck JT, Rolland M, Liu Y, McLaughlin S, McNevin J, et al. (2011) Demographic Processes Affect HIV-1 Evolution in Primary Infection before the Onset of Selective Processes. J Virol 85: 7523-7534 doi:10.1128/JVI.02697-10.
    • (2011) J Virol , vol.85 , pp. 7523-7534
    • Herbeck, J.T.1    Rolland, M.2    Liu, Y.3    McLaughlin, S.4    McNevin, J.5
  • 68
    • 79951805495 scopus 로고    scopus 로고
    • Transmission of single and multiple viral variants in primary HIV-1 subtype C infection
    • 10.1371/journal.pone.0016714
    • Novitsky V, Wang R, Margolin L, Baca J, Rossenkhan R, et al. (2011) Transmission of single and multiple viral variants in primary HIV-1 subtype C infection. PLoS ONE 6: e16714 doi:10.1371/journal.pone.0016714.
    • (2011) PLoS ONE , vol.6
    • Novitsky, V.1    Wang, R.2    Margolin, L.3    Baca, J.4    Rossenkhan, R.5
  • 69
    • 80052302577 scopus 로고    scopus 로고
    • Phenotypic and Immunologic Comparison of Clade B Transmitted/Founder and Chronic HIV-1 Envelope Glycoproteins
    • 10.1128/JVI.00736-11
    • Wilen CB, Parrish NF, Pfaff JM, Decker JM, Henning EA, et al. (2011) Phenotypic and Immunologic Comparison of Clade B Transmitted/Founder and Chronic HIV-1 Envelope Glycoproteins. J Virol 85: 8514-8527 doi:10.1128/JVI.00736-11.
    • (2011) J Virol , vol.85 , pp. 8514-8527
    • Wilen, C.B.1    Parrish, N.F.2    Pfaff, J.M.3    Decker, J.M.4    Henning, E.A.5
  • 70
    • 29444442970 scopus 로고    scopus 로고
    • Neutralizing antibody responses drive the evolution of human immunodeficiency virus type 1 envelope during recent HIV infection
    • 10.1073/pnas.0504658102
    • Frost SDW, Wrin T, Smith DM, Kosakovsky Pond SL, Liu Y, et al. (2005) Neutralizing antibody responses drive the evolution of human immunodeficiency virus type 1 envelope during recent HIV infection. Proc Natl Acad Sci USA 102: 18514-18519 doi:10.1073/pnas.0504658102.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 18514-18519
    • Frost, S.D.W.1    Wrin, T.2    Smith, D.M.3    Kosakovsky Pond, S.L.4    Liu, Y.5
  • 71
    • 0032710838 scopus 로고    scopus 로고
    • Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection
    • Shankarappa R, Margolick JB, Gange SJ, Rodrigo AG, Upchurch D, et al. (1999) Consistent viral evolutionary changes associated with the progression of human immunodeficiency virus type 1 infection. J Virol 73: 10489-10502.
    • (1999) J Virol , vol.73 , pp. 10489-10502
    • Shankarappa, R.1    Margolick, J.B.2    Gange, S.J.3    Rodrigo, A.G.4    Upchurch, D.5
  • 72
    • 84861313139 scopus 로고    scopus 로고
    • Selection pressure on HIV-1 envelope by broadly neutralizing antibodies to the conserved CD4-binding site
    • 10.1128/JVI.07139-11
    • Wu X, Wang C, O'Dell S, Li Y, Keele BF, et al. (2012) Selection pressure on HIV-1 envelope by broadly neutralizing antibodies to the conserved CD4-binding site. J Virol 86: 5844-5856 doi:10.1128/JVI.07139-11.
    • (2012) J Virol , vol.86 , pp. 5844-5856
    • Wu, X.1    Wang, C.2    O'Dell, S.3    Li, Y.4    Keele, B.F.5
  • 73
    • 79960405099 scopus 로고    scopus 로고
    • Longer V1V2 region with increased number of potential N-linked glycosylation sites in the HIV-1 envelope glycoprotein protects against HIV-specific neutralizing antibodies
    • 10.1128/JVI.00268-11
    • van Gils MJ, Bunnik EM, Boeser-Nunnink BD, Burger JA, Terlouw-Klein M, et al. (2011) Longer V1V2 region with increased number of potential N-linked glycosylation sites in the HIV-1 envelope glycoprotein protects against HIV-specific neutralizing antibodies. J Virol 85: 6986-6995 doi:10.1128/JVI.00268-11.
    • (2011) J Virol , vol.85 , pp. 6986-6995
    • van Gils, M.J.1    Bunnik, E.M.2    Boeser-Nunnink, B.D.3    Burger, J.A.4    Terlouw-Klein, M.5
  • 74
    • 79961179950 scopus 로고    scopus 로고
    • Evolution of human immunodeficiency virus type 1 in a patient with cross-reactive neutralizing activity in serum
    • 10.1128/JVI.05214-11
    • van Gils MJ, Edo-Matas D, Bowles EJ, Burger JA, Stewart-Jones GB, et al. (2011) Evolution of human immunodeficiency virus type 1 in a patient with cross-reactive neutralizing activity in serum. J Virol 85: 8443-8448 doi:10.1128/JVI.05214-11.
    • (2011) J Virol , vol.85 , pp. 8443-8448
    • van Gils, M.J.1    Edo-Matas, D.2    Bowles, E.J.3    Burger, J.A.4    Stewart-Jones, G.B.5
  • 75
    • 38849090714 scopus 로고    scopus 로고
    • The c3-v4 region is a major target of autologous neutralizing antibodies in human immunodeficiency virus type 1 subtype C infection
    • JVI.02187-07 [pii] 10.1128/JVI.02187-07
    • Moore PL, Gray ES, Choge IA, Ranchobe N, Mlisana K, et al. (2008) The c3-v4 region is a major target of autologous neutralizing antibodies in human immunodeficiency virus type 1 subtype C infection. J Virol 82: 1860-1869 doi:JVI.02187-07 [pii] 10.1128/JVI.02187-07.
    • (2008) J Virol , vol.82 , pp. 1860-1869
    • Moore, P.L.1    Gray, E.S.2    Choge, I.A.3    Ranchobe, N.4    Mlisana, K.5
  • 76
    • 33846552274 scopus 로고    scopus 로고
    • Role of V1V2 and other human immunodeficiency virus type 1 envelope domains in resistance to autologous neutralization during clade C infection
    • 10.1128/JVI.01839-06
    • Rong R, Bibollet-Ruche F, Mulenga J, Allen S, Blackwell JL, et al. (2007) Role of V1V2 and other human immunodeficiency virus type 1 envelope domains in resistance to autologous neutralization during clade C infection. J Virol 81: 1350-1359 doi:10.1128/JVI.01839-06.
    • (2007) J Virol , vol.81 , pp. 1350-1359
    • Rong, R.1    Bibollet-Ruche, F.2    Mulenga, J.3    Allen, S.4    Blackwell, J.L.5
  • 77
    • 78650280214 scopus 로고    scopus 로고
    • Identification of amino acid substitutions associated with neutralization phenotype in the human immunodeficiency virus type-1 subtype C gp120
    • 10.1016/j.virol.2010.09.031
    • Kirchherr JL, Hamilton J, Lu X, Gnanakaran S, Muldoon M, et al. (2011) Identification of amino acid substitutions associated with neutralization phenotype in the human immunodeficiency virus type-1 subtype C gp120. Virology 409: 163-174 doi:10.1016/j.virol.2010.09.031.
    • (2011) Virology , vol.409 , pp. 163-174
    • Kirchherr, J.L.1    Hamilton, J.2    Lu, X.3    Gnanakaran, S.4    Muldoon, M.5
  • 78
    • 78649431227 scopus 로고    scopus 로고
    • HIV-1 continues to replicate and evolve in patients with natural control of HIV infection
    • 10.1128/JVI.00387-10
    • Mens H, Kearney M, Wiegand A, Shao W, Schønning K, et al. (2010) HIV-1 continues to replicate and evolve in patients with natural control of HIV infection. J Virol 84: 12971-12981 doi:10.1128/JVI.00387-10.
    • (2010) J Virol , vol.84 , pp. 12971-12981
    • Mens, H.1    Kearney, M.2    Wiegand, A.3    Shao, W.4    Schønning, K.5
  • 79
    • 77953791222 scopus 로고    scopus 로고
    • Control of HIV-1 in elite suppressors despite ongoing replication and evolution in plasma virus
    • 10.1128/JVI.00548-10
    • O'Connell KA, Brennan TP, Bailey JR, Ray SC, Siliciano RF, et al. (2010) Control of HIV-1 in elite suppressors despite ongoing replication and evolution in plasma virus. J Virol 84: 7018-7028 doi:10.1128/JVI.00548-10.
    • (2010) J Virol , vol.84 , pp. 7018-7028
    • O'Connell, K.A.1    Brennan, T.P.2    Bailey, J.R.3    Ray, S.C.4    Siliciano, R.F.5
  • 80
    • 14444273439 scopus 로고    scopus 로고
    • Identification of a reservoir for HIV-1 in patients on highly active antiretroviral therapy
    • Finzi D, Hermankova M, Pierson T, Carruth LM, Buck C, et al. (1997) Identification of a reservoir for HIV-1 in patients on highly active antiretroviral therapy. Science 278: 1295-1300.
    • (1997) Science , vol.278 , pp. 1295-1300
    • Finzi, D.1    Hermankova, M.2    Pierson, T.3    Carruth, L.M.4    Buck, C.5
  • 81
    • 0030712305 scopus 로고    scopus 로고
    • Recovery of replication-competent HIV despite prolonged suppression of plasma viremia
    • Wong JK, Hezareh M, Günthard HF, Havlir DV, Ignacio CC, et al. (1997) Recovery of replication-competent HIV despite prolonged suppression of plasma viremia. Science 278: 1291-1295.
    • (1997) Science , vol.278 , pp. 1291-1295
    • Wong, J.K.1    Hezareh, M.2    Günthard, H.F.3    Havlir, D.V.4    Ignacio, C.C.5
  • 82
    • 77955653140 scopus 로고    scopus 로고
    • Genetic composition of replication competent clonal HIV-1 variants isolated from peripheral blood mononuclear cells (PBMC), HIV-1 proviral DNA from PBMC and HIV-1 RNA in serum in the course of HIV-1 infection
    • 10.1016/j.virol.2010.06.029
    • Edo-Matas D, van Gils MJ, Bowles EJ, Navis M, Rachinger A, et al. (2010) Genetic composition of replication competent clonal HIV-1 variants isolated from peripheral blood mononuclear cells (PBMC), HIV-1 proviral DNA from PBMC and HIV-1 RNA in serum in the course of HIV-1 infection. Virology 405: 492-504 doi:10.1016/j.virol.2010.06.029.
    • (2010) Virology , vol.405 , pp. 492-504
    • Edo-Matas, D.1    van Gils, M.J.2    Bowles, E.J.3    Navis, M.4    Rachinger, A.5
  • 83
    • 80053948552 scopus 로고    scopus 로고
    • Molecular evolution analysis of the Human Immunodeficiency Virus type 1 envelope in SHIV-infected macaques: implications for challenge dose selection
    • Available, Accessed 12 August 2011
    • Varela M, Landskron L, Lai RPJ, McKinley TJ, Bogers WM, et al. (2011) Molecular evolution analysis of the Human Immunodeficiency Virus type 1 envelope in SHIV-infected macaques: implications for challenge dose selection. J Virol. Available:http://www.ncbi.nlm.nih.gov/pubmed/21795341. Accessed 12 August 2011.
    • (2011) J Virol
    • Varela, M.1    Landskron, L.2    Lai, R.P.J.3    McKinley, T.J.4    Bogers, W.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.