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Volumn 68, Issue 10, 2002, Pages 4751-4757

Growth at low ammonium concentrations and starvation response as potential factors involved in niche differentiation among ammonia-oxidizing bacteria

Author keywords

[No Author keywords available]

Indexed keywords

GROWTH KINETICS; NITROGEN COMPOUNDS; SEDIMENTS;

EID: 0036794991     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.68.10.4751-4757.2002     Document Type: Article
Times cited : (181)

References (41)
  • 1
    • 0001818828 scopus 로고
    • r- and K-selection and microbial ecology
    • Andrews, J. H., and R. F. Harris. 1986. r- and K-selection and microbial ecology. Adv. Microb. Ecol. 9:99-147.
    • (1986) Adv. Microb. Ecol. , vol.9 , pp. 99-147
    • Andrews, J.H.1    Harris, R.F.2
  • 2
    • 0018872733 scopus 로고
    • Growth and oxidation kinetics of three genera of ammonia-oxidizing nitrifiers
    • Belser, L. W., and E. L. Schmidt. 1980. Growth and oxidation kinetics of three genera of ammonia-oxidizing nitrifiers. FEMS Microbiol. Lett. 7:213-216.
    • (1980) FEMS Microbiol. Lett. , vol.7 , pp. 213-216
    • Belser, L.W.1    Schmidt, E.L.2
  • 3
    • 0031983095 scopus 로고    scopus 로고
    • Interactions between nitrifying and denitrifying bacteria in gnotobiotic microcosms planted with the emergent macrophyte Glyceria maxima
    • Bodelier, P. L. E., H. Duyts, C. W. P. M. Blom, and H. J. Laanbroek. 1998. Interactions between nitrifying and denitrifying bacteria in gnotobiotic microcosms planted with the emergent macrophyte Glyceria maxima. FEMS Microbiol. Ecol. 25:63-78.
    • (1998) FEMS Microbiol. Ecol. , vol.25 , pp. 63-78
    • Bodelier, P.L.E.1    Duyts, H.2    Blom, C.W.P.M.3    Laanbroek, H.J.4
  • 4
    • 0035217967 scopus 로고    scopus 로고
    • Continuous culture enrichments of ammonia-oxidizing bacteria at low ammonium concentrations
    • Bollmann, A., and H. J. Laanbroek. 2001. Continuous culture enrichments of ammonia-oxidizing bacteria at low ammonium concentrations. FEMS Microbiol. Ecol. 37:211-221.
    • (2001) FEMS Microbiol. Ecol. , vol.37 , pp. 211-221
    • Bollmann, A.1    Laanbroek, H.J.2
  • 5
    • 0033930011 scopus 로고    scopus 로고
    • Novel Nitrospira-like bacteria as dominant nitrite-oxidizers in biofilms from wastewater treatment plants: Diversity and in situ physiology
    • Daims, H., P. H. Nielsen, J. L. Nielsen, S. Juretschko, and M. Wagner. 2000. Novel Nitrospira-like bacteria as dominant nitrite-oxidizers in biofilms from wastewater treatment plants: diversity and in situ physiology. Water Sci. Technol. 41:85-90.
    • (2000) Water Sci. Technol. , vol.41 , pp. 85-90
    • Daims, H.1    Nielsen, P.H.2    Nielsen, J.L.3    Juretschko, S.4    Wagner, M.5
  • 6
    • 0031880656 scopus 로고    scopus 로고
    • Ammonium-induced inhibition of ammonium-starved Nitrosomonas europaea cells in soil and sand slurries
    • Gerards, S., H. Duyts, and H. J. Laanbroek. 1998. Ammonium-induced inhibition of ammonium-starved Nitrosomonas europaea cells in soil and sand slurries. FEMS Microbiol. Ecol. 26:269-280.
    • (1998) FEMS Microbiol. Ecol. , vol.26 , pp. 269-280
    • Gerards, S.1    Duyts, H.2    Laanbroek, H.J.3
  • 7
    • 0002605089 scopus 로고
    • Nitrogen absorption in higher plants
    • H. S. Srivastava and R. P. Singh (ed.). Association Publishing, New Delhi, India
    • Glass, A. D. M., and M. Y. Siddiqui. 1995. Nitrogen absorption in higher plants, p. 21-55. In H. S. Srivastava and R. P. Singh (ed.), Nitrogen nutrition in higher plants. Association Publishing, New Delhi, India.
    • (1995) Nitrogen nutrition in higher plants , pp. 21-55
    • Glass, A.D.M.1    Siddiqui, M.Y.2
  • 8
    • 0031680225 scopus 로고    scopus 로고
    • Application of molecular biological techniques to a seasonal study of ammonia oxidation in a eutrophic freshwater lake
    • Hastings, R. C., J. R. Saunders, G. H. Hall, R. W. Pickup, and A. J. McCarthy. 1998. Application of molecular biological techniques to a seasonal study of ammonia oxidation in a eutrophic freshwater lake. Appl. Environ. Microbiol. 64:3674-3682.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3674-3682
    • Hastings, R.C.1    Saunders, J.R.2    Hall, G.H.3    Pickup, R.W.4    McCarthy, A.J.5
  • 9
    • 0027184336 scopus 로고
    • The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal RNA gene sequences
    • Head, I. M., W. D. Hiorns, T. M. Embley, A. J. McCarthy, and J. R. Saunders. 1993. The phylogeny of autotrophic ammonia-oxidizing bacteria as determined by analysis of 16S ribosomal RNA gene sequences. J. Gen. Microbiol. 139:1147-1153.
    • (1993) J. Gen. Microbiol. , vol.139 , pp. 1147-1153
    • Head, I.M.1    Hiorns, W.D.2    Embley, T.M.3    McCarthy, A.J.4    Saunders, J.R.5
  • 10
    • 0002888487 scopus 로고
    • Short-term assay of soil urease activity using colorimetric determination of ammonium
    • Kandeler, E., and H. Gerber. 1988. Short-term assay of soil urease activity using colorimetric determination of ammonium. Biol. Fertil. Soils 6:68-72.
    • (1988) Biol. Fertil. Soils , vol.6 , pp. 68-72
    • Kandeler, E.1    Gerber, H.2
  • 11
    • 0000677835 scopus 로고
    • Nitrogen - Inorganic forms
    • A. L. Page (ed.). American Society of Agronomy, Madison, Wis
    • Keeney, D. R., and D. W. Nelson. 1982. Nitrogen-inorganic forms, p. 643-693. In A. L. Page (ed.), Methods of soil analysis. Part 2. American Society of Agronomy, Madison, Wis.
    • (1982) Methods of soil analysis. Part 2 , pp. 643-693
    • Keeney, D.R.1    Nelson, D.W.2
  • 12
    • 0034868585 scopus 로고    scopus 로고
    • Distribution and ecophysiology of the nitrifying bacteria emphasizing cultured species
    • Koops, H. P., and A. Pommerening-Roser. 2001. Distribution and ecophysiology of the nitrifying bacteria emphasizing cultured species. FEMS Microbiol. Ecol. 37:1-9.
    • (2001) FEMS Microbiol. Ecol. , vol.37 , pp. 1-9
    • Koops, H.P.1    Pommerening-Roser, A.2
  • 13
    • 0032436805 scopus 로고    scopus 로고
    • Community analysis of ammonia-oxidising bacteria, in relation to oxygen availability in soils and root-oxygenated sediments, using PCR, DGGE and oligonucleotide probe hybridisation
    • Kowalchuk, G. A., P. L. E. Bodelier, G. H. J. Heilig, J. R. Stephen, and H. J. Laanbroek. 1998. Community analysis of ammonia-oxidising bacteria, in relation to oxygen availability in soils and root-oxygenated sediments, using PCR, DGGE and oligonucleotide probe hybridisation. FEMS Microbiol. Ecol. 27:339-350.
    • (1998) FEMS Microbiol. Ecol. , vol.27 , pp. 339-350
    • Kowalchuk, G.A.1    Bodelier, P.L.E.2    Heilig, G.H.J.3    Stephen, J.R.4    Laanbroek, H.J.5
  • 14
    • 0034548634 scopus 로고    scopus 로고
    • Changes in the community structure of ammonia-oxidizing bacteria during secondary succession of calcareous grasslands
    • Kowalchuk, G. A., A. W. Stienstra, G. H. J. Heilig, J. R. Stephen, and J. W. Woldendorp. 2000. Changes in the community structure of ammonia-oxidizing bacteria during secondary succession of calcareous grasslands. Environ. Microbiol. 2:99-110.
    • (2000) Environ. Microbiol. , vol.2 , pp. 99-110
    • Kowalchuk, G.A.1    Stienstra, A.W.2    Heilig, G.H.J.3    Stephen, J.R.4    Woldendorp, J.W.5
  • 15
    • 0034009793 scopus 로고    scopus 로고
    • Molecular analysis of ammonia-oxidising bacteria in soil of successional grasslands of the Drentsche A (The Netherlands)
    • Kowalchuk, G. A., A. W. Stienstra, G. H. J. Heilig, J. R. Stephen, and J. W. Woldendorp. 2000. Molecular analysis of ammonia-oxidising bacteria in soil of successional grasslands of the Drentsche A (The Netherlands). FEMS Microbiol. Ecol. 31:207-215.
    • (2000) FEMS Microbiol. Ecol. , vol.31 , pp. 207-215
    • Kowalchuk, G.A.1    Stienstra, A.W.2    Heilig, G.H.J.3    Stephen, J.R.4    Woldendorp, J.W.5
  • 16
    • 0034775280 scopus 로고    scopus 로고
    • Ammonia-oxidizing bacteria: A model for molecular microbial ecology
    • Kowalchuk, G. A., and J. R. Stephen. 2001. Ammonia-oxidizing bacteria: a model for molecular microbial ecology. Annu. Rev. Microbiol. 55:485-529.
    • (2001) Annu. Rev. Microbiol. , vol.55 , pp. 485-529
    • Kowalchuk, G.A.1    Stephen, J.R.2
  • 18
    • 0027460328 scopus 로고
    • Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA
    • Muyzer, G., E. C. DeWaal, and A. G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59:695-700.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 695-700
    • Muyzer, G.1    DeWaal, E.C.2    Uitterlinden, A.G.3
  • 19
    • 0034466757 scopus 로고    scopus 로고
    • Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: Implications for molecular diversity surveys
    • Purkhold, U., A. PommereningRoser, S. Juretschko, M. C. Schmid, H. P. Koops, and M. Wagner. 2000. Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: implications for molecular diversity surveys. Appl. Environ. Microbiol. 66:5368-5382.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 5368-5382
    • Purkhold, U.1    PommereningRoser, A.2    Juretschko, S.3    Schmid, M.C.4    Koops, H.P.5    Wagner, M.6
  • 20
    • 0029659250 scopus 로고    scopus 로고
    • Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of microelectrodes
    • Schramm, A., L. H. Larsen, N. P. Revsbech, N. B. Ramsing, R. Amann, and K. H. Schleifer. 1996. Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of microelectrodes. Appl. Environ. Microbiol. 62:4641-4647.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 4641-4647
    • Schramm, A.1    Larsen, L.H.2    Revsbech, N.P.3    Ramsing, N.B.4    Amann, R.5    Schleifer, K.H.6
  • 21
    • 0031684927 scopus 로고    scopus 로고
    • Identification and activities in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor
    • Schramm, A., D. de Beer, M. Wagner, and R. Amann. 1998. Identification and activities in situ of Nitrosospira and Nitrospira spp. as dominant populations in a nitrifying fluidized bed reactor. Appl. Environ. Microbiol. 64:3480-3485.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3480-3485
    • Schramm, A.1    De Beer, D.2    Wagner, M.3    Amann, R.4
  • 22
    • 0032812283 scopus 로고    scopus 로고
    • Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor: Quantification by in situ hybridization and the use of microsensors
    • Schramm, A., D. de Beer, J. C. van den Heuvel, S. Ottengraf, and R. Amann. 1999. Microscale distribution of populations and activities of Nitrosospira and Nitrospira spp. along a macroscale gradient in a nitrifying bioreactor: quantification by in situ hybridization and the use of microsensors. Appl. Environ. Microbiol. 65:3690-3696.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 3690-3696
    • Schramm, A.1    De Beer, D.2    Van den Heuvel, J.C.3    Ottengraf, S.4    Amann, R.5
  • 25
    • 0028797062 scopus 로고
    • Exopolymers: An ecological characteristic of a floc-attached, ammonia-oxidizing bacterium
    • Stehr, G., S. Zorner, B. Bottcher, and H. P. Koops. 1995. Exopolymers: an ecological characteristic of a floc-attached, ammonia-oxidizing bacterium. Microb. Ecol. 30:115-126.
    • (1995) Microb. Ecol. , vol.30 , pp. 115-126
    • Stehr, G.1    Zorner, S.2    Bottcher, B.3    Koops, H.P.4
  • 26
    • 0031980273 scopus 로고    scopus 로고
    • Ammonium limitation results in the loss of ammonia-oxidizing activity in Nitrosomonas europaea
    • Stein, L. Y., and D. J. Arp. 1998. Ammonium limitation results in the loss of ammonia-oxidizing activity in Nitrosomonas europaea. Appl. Environ. Microbiol. 64:1514-1521.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 1514-1521
    • Stein, L.Y.1    Arp, D.J.2
  • 27
    • 0029805297 scopus 로고    scopus 로고
    • Molecular diversity of soil and marine 16S rRNA gene sequences related to beta-subgroup ammonia-oxidizing bacteria
    • Stephen, J. R., A. E. McCaig, Z. Smith, J. I. Prosser, and T. M. Embley. 1996. Molecular diversity of soil and marine 16S rRNA gene sequences related to beta-subgroup ammonia-oxidizing bacteria. Appl. Environ. Microbiol. 62:4147-4154.
    • (1996) Appl. Environ. Microbiol. , vol.62 , pp. 4147-4154
    • Stephen, J.R.1    McCaig, A.E.2    Smith, Z.3    Prosser, J.I.4    Embley, T.M.5
  • 29
    • 0031421454 scopus 로고    scopus 로고
    • Phylogenetic relationships of activated sludge isolates of ammonia oxidizers with different sensitivities to ammonium sulfate
    • Suwa, Y., T. Sumino, and K. Noto. 1997. Phylogenetic relationships of activated sludge isolates of ammonia oxidizers with different sensitivities to ammonium sulfate. J. Gen. Appl. Microbiol. Tokyo 43:373-379.
    • (1997) J. Gen. Appl. Microbiol. Tokyo , vol.43 , pp. 373-379
    • Suwa, Y.1    Sumino, T.2    Noto, K.3
  • 30
    • 0032974710 scopus 로고    scopus 로고
    • Maintenance energy demand and starvation recovery dynamics of Nitrosomonas europaea and Nitrobacter winogradskyi cultivated in a retentostat with complete biomass retention
    • Tappe, W., A. Laverman, M. Bohland, M. Braster, S. Rittershaus, J. Groeneweg, and H. W. Van Verseveld. 1999. Maintenance energy demand and starvation recovery dynamics of Nitrosomonas europaea and Nitrobacter winogradskyi cultivated in a retentostat with complete biomass retention. Appl. Environ. Microbiol. 65:2471-2477.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 2471-2477
    • Tappe, W.1    Laverman, A.2    Bohland, M.3    Braster, M.4    Rittershaus, S.5    Groeneweg, J.6    Van Verseveld, H.W.7
  • 31
    • 0030040940 scopus 로고    scopus 로고
    • Phylogenetic analysis of seven new isolates of ammonia-oxidizing bacteria based on 16S rRNA gene sequences
    • Utåker, J. B., L. Bakken, Q. Q. Jiang, and I. F. Nes. 1996. Phylogenetic analysis of seven new isolates of ammonia-oxidizing bacteria based on 16S rRNA gene sequences. Syst. Appl. Microbiol. 18:549-559.
    • (1996) Syst. Appl. Microbiol. , vol.18 , pp. 549-559
    • Utåker, J.B.1    Bakken, L.2    Jiang, Q.Q.3    Nes, I.F.4
  • 32
  • 33
    • 0025919586 scopus 로고
    • Competition for ammonium between nitrifying and heterotrophic bacteria in dual energy-limited chemostats
    • Verhagen, F. J. M., and H. J. Laanbroek. 1991. Competition for ammonium between nitrifying and heterotrophic bacteria in dual energy-limited chemostats. Appl. Environ. Microbiol. 57:3255-3263.
    • (1991) Appl. Environ. Microbiol. , vol.57 , pp. 3255-3263
    • Verhagen, F.J.M.1    Laanbroek, H.J.2
  • 34
    • 0028162639 scopus 로고
    • Competition for ammonium between nitrifying bacteria and plant roots in soil in pots - Effects of grazing by flagellates and fertilization
    • Verhagen, F. J. M., P. E. J. Hageman, J. W. Woldendorp, and H. J. Laanbroek. 1994. Competition for ammonium between nitrifying bacteria and plant roots in soil in pots-effects of grazing by flagellates and fertilization. Soil Biol. Biochem. 26:89-96.
    • (1994) Soil Biol. Biochem. , vol.26 , pp. 89-96
    • Verhagen, F.J.M.1    Hageman, P.E.J.2    Woldendorp, J.W.3    Laanbroek, H.J.4
  • 35
    • 0028993835 scopus 로고
    • Competition for ammonium between plant roots and nitrifying and heterotrophic bacteria and the effects of protozoan grazing
    • Verhagen, F. J. M., H. J. Laanbroek, and J. W. Woldendorp. 1995. Competition for ammonium between plant roots and nitrifying and heterotrophic bacteria and the effects of protozoan grazing. Plant Soil 170:241-250.
    • (1995) Plant Soil , vol.170 , pp. 241-250
    • Verhagen, F.J.M.1    Laanbroek, H.J.2    Woldendorp, J.W.3
  • 36
    • 0030785550 scopus 로고    scopus 로고
    • Regulation of mineral nitrogen uptake in plants
    • von Wiren, N., S. Gazzarrini, and W. B. Frommer. 1997. Regulation of mineral nitrogen uptake in plants. Plant Soil 196:191-199.
    • (1997) Plant Soil , vol.196 , pp. 191-199
    • Von Wiren, N.1    Gazzarrini, S.2    Frommer, W.B.3
  • 37
    • 0029825018 scopus 로고
    • In situ analysis of nitrifying bacteria in sewage treatment plants
    • Wagner, M., G. Rath, H. P. Koops, J. Flood, and R. Amann. 1995. In situ analysis of nitrifying bacteria in sewage treatment plants. Water Sci. Technol. 34:237-244.
    • (1995) Water Sci. Technol. , vol.34 , pp. 237-244
    • Wagner, M.1    Rath, G.2    Koops, H.P.3    Flood, J.4    Amann, R.5
  • 38
    • 0032705903 scopus 로고    scopus 로고
    • Phylogenetic differentiation of two closely related Nitrosomonas spp. that inhabit different sediment environments in an oligotrophic freshwater lake
    • Whitby, C. B., J. R. Saunders, J. Rodriguez, R. W. Pickup, and A. McCarthy. 1999. Phylogenetic differentiation of two closely related Nitrosomonas spp. that inhabit different sediment environments in an oligotrophic freshwater lake. Appl. Environ. Microbiol. 65:4855-4862.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4855-4862
    • Whitby, C.B.1    Saunders, J.R.2    Rodriguez, J.3    Pickup, R.W.4    McCarthy, A.5
  • 39
    • 0031768533 scopus 로고    scopus 로고
    • Effect of long-term ammonia starvation on the oxidation of ammonia and hydroxylamine by Nitrosomonas europaea
    • Wilhelm, R., A. Abeliovich, and A. Nejidat. 1998. Effect of long-term ammonia starvation on the oxidation of ammonia and hydroxylamine by Nitrosomonas europaea. J. Biochem. 124:811-815.
    • (1998) J. Biochem. , vol.124 , pp. 811-815
    • Wilhelm, R.1    Abeliovich, A.2    Nejidat, A.3
  • 40
    • 0003140215 scopus 로고
    • Nitrification as a bacterial energy source
    • J. I. Prosser (ed.). IRL Press, Oxford, England
    • Wood, P. M. 1986. Nitrification as a bacterial energy source, p. 39-62. In J. I. Prosser (ed.), Nitrification, vol. 20. IRL Press, Oxford, England.
    • (1986) Nitrification , vol.20 , pp. 39-62
    • Wood, P.M.1


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