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Volumn 7, Issue 7, 2012, Pages

The natural history of class I primate alcohol dehydrogenases includes gene duplication, gene loss, and gene conversion

Author keywords

[No Author keywords available]

Indexed keywords

ALCOHOL DEHYDROGENASE; ALCOHOL DEHYDROGENASE 1; MESSENGER RNA; UNCLASSIFIED DRUG;

EID: 84864418969     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0041175     Document Type: Article
Times cited : (16)

References (74)
  • 2
    • 33745373606 scopus 로고    scopus 로고
    • Primate segmental duplications: crucibles of evolution, diversity and disease
    • Bailey JA, Eichler EE, ((2006)) Primate segmental duplications: crucibles of evolution, diversity and disease. Nature Reviews Genetics 7:: 552--564.
    • (2006) Nature Reviews Genetics , vol.7 , pp. 552-564
    • Bailey, J.A.1    Eichler, E.E.2
  • 3
    • 3342888069 scopus 로고    scopus 로고
    • Empirical analysis of insertions and deletions in protein sequence evolution
    • Chang M, Benner SA, ((2004)) Empirical analysis of insertions and deletions in protein sequence evolution. J Mol Biol 341:: 617--631.
    • (2004) J Mol Biol , vol.341 , pp. 617-631
    • Chang, M.1    Benner, S.A.2
  • 4
    • 0036301488 scopus 로고    scopus 로고
    • Detecting compensatory covariation signals in protein evolution using reconstructed ancestral sequences
    • Fukami-Kobayashi K, Schreiber DR, Benner SA, ((2002)) Detecting compensatory covariation signals in protein evolution using reconstructed ancestral sequences. J Mol Biol 319:: 729--743.
    • (2002) J Mol Biol , vol.319 , pp. 729-743
    • Fukami-Kobayashi, K.1    Schreiber, D.R.2    Benner, S.A.3
  • 5
    • 34047199274 scopus 로고    scopus 로고
    • The evolution of seminal ribonuclease. Pseudogene reactivation or multiple gene inactivation events?
    • Sassi SO, Braun EL, Benner SA, ((2007)) The evolution of seminal ribonuclease. Pseudogene reactivation or multiple gene inactivation events? Mol Biol Evol 24:: 1012--1024.
    • (2007) Mol Biol Evol , vol.24 , pp. 1012-1024
    • Sassi, S.O.1    Braun, E.L.2    Benner, S.A.3
  • 6
    • 7544223352 scopus 로고    scopus 로고
    • Addressing the use of phylogenetics for identification of sequences in error in the SWGDAM mitochondrial DNA database
    • Budowle V, Polanskey D, Allard MW, Chakraborty R, ((2004)) Addressing the use of phylogenetics for identification of sequences in error in the SWGDAM mitochondrial DNA database. J Forensic Sci 49:: 1256--1261.
    • (2004) J Forensic Sci , vol.49 , pp. 1256-1261
    • Budowle, V.1    Polanskey, D.2    Allard, M.W.3    Chakraborty, R.4
  • 7
    • 17444408980 scopus 로고    scopus 로고
    • Phylogenomic approaches to common problems encountered in the analysis of low copy repeats: The sulfotransferase 1A gene family example
    • Art No 22
    • Bradley ME, Benner SA (2005) Phylogenomic approaches to common problems encountered in the analysis of low copy repeats: The sulfotransferase 1A gene family example. BMC Evol Biol 5: Art No 22.
    • (2005) BMC Evol Biol , vol.5
    • Bradley, M.E.1    Benner, S.A.2
  • 8
    • 0028895702 scopus 로고
    • Reconstructing the evolutionary history of the artiodactyl ribonuclease superfamily
    • Jermann TM, Opitz JG, Stackhouse J, Benner SA, ((1995)) Reconstructing the evolutionary history of the artiodactyl ribonuclease superfamily. Nature 374:: 57--59.
    • (1995) Nature , vol.374 , pp. 57-59
    • Jermann, T.M.1    Opitz, J.G.2    Stackhouse, J.3    Benner, S.A.4
  • 9
    • 84861004455 scopus 로고    scopus 로고
    • The early days of paleogenetics. Connecting molecules to the planet
    • D. A. Liberles, ed. Academic Press
    • Benner SA (2007) The early days of paleogenetics. Connecting molecules to the planet. Experimental Paleogenetics, D. A. Liberles, ed. Academic Press, 3-19.
    • (2007) Experimental Paleogenetics , pp. 3-19
    • Benner, S.A.1
  • 10
    • 0141431993 scopus 로고    scopus 로고
    • Resurrecting the ancestral steroid receptor. Ancient origin of estrogen signaling
    • Thornton JW, Need E, Crews D, ((2003)) Resurrecting the ancestral steroid receptor. Ancient origin of estrogen signaling. Science 301:: 1714--1717.
    • (2003) Science , vol.301 , pp. 1714-1717
    • Thornton, J.W.1    Need, E.2    Crews, D.3
  • 11
  • 12
    • 0037012937 scopus 로고    scopus 로고
    • Planetary biology. Paleontological, geological, and molecular histories of life
    • Benner SA, Caraco MD, Thomson JM, Gaucher EA (2002) Planetary biology. Paleontological, geological, and molecular histories of life. Science 293, 864-868.
    • (2002) Science , vol.293 , pp. 864-868
    • Benner, S.A.1    Caraco, M.D.2    Thomson, J.M.3    Gaucher, E.A.4
  • 13
    • 0016345760 scopus 로고
    • Chemical and biological evolution of nucleotide-binding proteins
    • Rossmann MG, Moras D, Olsen KW, ((1974)) Chemical and biological evolution of nucleotide-binding proteins. Nature 250:: 194--199.
    • (1974) Nature , vol.250 , pp. 194-199
    • Rossmann, M.G.1    Moras, D.2    Olsen, K.W.3
  • 14
    • 29244479504 scopus 로고    scopus 로고
    • Merging protein, gene and genomic data: the evolution of the MDR-ADH family
    • Gonzalez-Duarte R, Albalat R, ((2005)) Merging protein, gene and genomic data: the evolution of the MDR-ADH family. Heredity 95:: 184--197.
    • (2005) Heredity , vol.95 , pp. 184-197
    • Gonzalez-Duarte, R.1    Albalat, R.2
  • 15
    • 0033173362 scopus 로고    scopus 로고
    • Recommended nomenclature for the vertebrate alcohol dehydrogenase gene family
    • Duester G, Farrés J, Felder MR, Holmes RS, Höög J-O, et al. ((1999)) Recommended nomenclature for the vertebrate alcohol dehydrogenase gene family. Biochem Pharmacol 58:: 389--395.
    • (1999) Biochem Pharmacol , vol.58 , pp. 389-395
    • Duester, G.1    Farrés, J.2    Felder, M.R.3    Holmes, R.S.4    Höög, J.-O.5
  • 16
    • 0000221995 scopus 로고
    • Glutathione-dependent oxidoreductases: formaldehyde dehydrogenase
    • In: D. Dolphin, R. Poulson and O. Avramovic, Editors, John Wiley & Sons, New York part A
    • Uotila L, Koivusalo M (1989) Glutathione-dependent oxidoreductases: formaldehyde dehydrogenase. In: D. Dolphin, R. Poulson and O. Avramovic, Editors, Coenzymes and Cofactors, Glutathione. Chemical, Biochemical and Medical Aspects vol. 3, John Wiley & Sons, New York 517-551 part A.
    • (1989) Coenzymes and Cofactors, Glutathione. Chemical, Biochemical and Medical Aspects vol. 3 , pp. 517-551
    • Uotila, L.1    Koivusalo, M.2
  • 17
    • 0024422072 scopus 로고
    • Evidence for the identity of glutathione-dependent formaldehyde dehydrogenase and class III alcohol dehydrogenase
    • Koivusalo M, Baumann M, Uotila L, ((1989)) Evidence for the identity of glutathione-dependent formaldehyde dehydrogenase and class III alcohol dehydrogenase. FEBS Lett 257:: 105--109.
    • (1989) FEBS Lett , vol.257 , pp. 105-109
    • Koivusalo, M.1    Baumann, M.2    Uotila, L.3
  • 18
    • 0026076043 scopus 로고
    • Human liver class III alcohol and glutathione dependent formaldehyde dehydrogenase are the same enzyme
    • Holmquist B, Vallee BL, ((1991)) Human liver class III alcohol and glutathione dependent formaldehyde dehydrogenase are the same enzyme. Biochem Biophys Res Commun 178:: 1371--1377.
    • (1991) Biochem Biophys Res Commun , vol.178 , pp. 1371-1377
    • Holmquist, B.1    Vallee, B.L.2
  • 19
    • 0026652564 scopus 로고
    • Progressive sequence alignment and molecular evolution of the Zn-containing alcohol dehydrogenase family
    • Sun HW, Plapp BV, ((1992)) Progressive sequence alignment and molecular evolution of the Zn-containing alcohol dehydrogenase family. J Mol Evol 34:: 522--535.
    • (1992) J Mol Evol , vol.34 , pp. 522-535
    • Sun, H.W.1    Plapp, B.V.2
  • 20
    • 0025651429 scopus 로고
    • Multiplication of the class I alcohol dehydrogenase locus in mammalian evolution
    • Yasunami M, Chen CS, Yoshida A, ((1990)) Multiplication of the class I alcohol dehydrogenase locus in mammalian evolution. Biochem Gen 28:: 591--599.
    • (1990) Biochem Gen , vol.28 , pp. 591-599
    • Yasunami, M.1    Chen, C.S.2    Yoshida, A.3
  • 21
    • 0015732633 scopus 로고
    • Studies on the properties of the human alcohol dehydrogenase isozymes determined by the different loci ADH1, ADH2, ADH3
    • Smith M, Hopkinson DA, Harris H, ((1973)) Studies on the properties of the human alcohol dehydrogenase isozymes determined by the different loci ADH1, ADH2, ADH3. Ann Hum Genet 37:: 49--67.
    • (1973) Ann Hum Genet , vol.37 , pp. 49-67
    • Smith, M.1    Hopkinson, D.A.2    Harris, H.3
  • 22
    • 0027340263 scopus 로고
    • Primate origins: plugging the gaps
    • Martin RD, ((1993)) Primate origins: plugging the gaps. Nature 363:: 223--234.
    • (1993) Nature , vol.363 , pp. 223-234
    • Martin, R.D.1
  • 23
    • 0000236012 scopus 로고
    • Time of origin of primates
    • Gingerich PD, Uhen MD, ((1994)) Time of origin of primates. J Human Evol 27:: 443--445.
    • (1994) J Human Evol , vol.27 , pp. 443-445
    • Gingerich, P.D.1    Uhen, M.D.2
  • 24
    • 0037129204 scopus 로고    scopus 로고
    • Using the fossil record to estimate the age of the last common ancestor of extant primates
    • Tavaré S, Marshall CR, Will O, Soligos C, Martin RD, ((2002)) Using the fossil record to estimate the age of the last common ancestor of extant primates. Nature 416:: 726--729.
    • (2002) Nature , vol.416 , pp. 726-729
    • Tavaré, S.1    Marshall, C.R.2    Will, O.3    Soligos, C.4    Martin, R.D.5
  • 25
    • 0022462417 scopus 로고
    • Three human alcohol dehydrogenase subunits: cDNA structure and molecular and evolutionary divergence
    • Ikuta T, Szeto S, Yoshida A, ((1986)) Three human alcohol dehydrogenase subunits: cDNA structure and molecular and evolutionary divergence. Proc Natl Acad Sci USA 83:: 634--638.
    • (1986) Proc Natl Acad Sci USA , vol.83 , pp. 634-638
    • Ikuta, T.1    Szeto, S.2    Yoshida, A.3
  • 26
    • 0024391394 scopus 로고
    • Cloning and sequencing of cDNA encoding baboon liver alcohol dehydrogenase: evidence for a common ancestral lineage with the human alcohol dehydrogenase beta subunit and for class-I ADH gene duplications predating primate radiation
    • Trezise AEO, Godfrey EA, Holmes RS, Beacham IR, ((1989)) Cloning and sequencing of cDNA encoding baboon liver alcohol dehydrogenase: evidence for a common ancestral lineage with the human alcohol dehydrogenase beta subunit and for class-I ADH gene duplications predating primate radiation. Proc Natl Acad Sci USA 86:: 5454--5458.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 5454-5458
    • Trezise, A.E.O.1    Godfrey, E.A.2    Holmes, R.S.3    Beacham, I.R.4
  • 27
    • 0023410282 scopus 로고
    • Molecular evolution of mammalian class I alcohol dehydrogenase
    • Yokoyama S, Yokoyama R, ((1987)) Molecular evolution of mammalian class I alcohol dehydrogenase. Mol Biol Evol 4:: 504--513.
    • (1987) Mol Biol Evol , vol.4 , pp. 504-513
    • Yokoyama, S.1    Yokoyama, R.2
  • 28
    • 0025361065 scopus 로고
    • Molecular evolution of the zinc-containing long chain alcohol dehydrogenase genes
    • Yokoyama S, Yokoyama R, Kinlaw CS, Harry DE, ((1990)) Molecular evolution of the zinc-containing long chain alcohol dehydrogenase genes. Mol Biol Evol 7:: 143--154.
    • (1990) Mol Biol Evol , vol.7 , pp. 143-154
    • Yokoyama, S.1    Yokoyama, R.2    Kinlaw, C.S.3    Harry, D.E.4
  • 29
    • 0027428004 scopus 로고
    • Molecular phylogeny and evolutionary rates of alcohol dehydrogenase in vertebrates and plants
    • Yokoyama S, Harry DE, ((1993)) Molecular phylogeny and evolutionary rates of alcohol dehydrogenase in vertebrates and plants. Mol Biol Evol 10:: 1215--1226.
    • (1993) Mol Biol Evol , vol.10 , pp. 1215-1226
    • Yokoyama, S.1    Harry, D.E.2
  • 30
    • 0025858305 scopus 로고
    • Evidence for three genes encoding class-I alcohol dehydrogenase subunits in baboon and analysis of the 59 region of the gene encoding the ADH beta subunit
    • Trezise AEO, Cheung B, Holmes RS, Beacham IR, ((1991)) Evidence for three genes encoding class-I alcohol dehydrogenase subunits in baboon and analysis of the 59 region of the gene encoding the ADH beta subunit. Gene 103:: 211--218.
    • (1991) Gene , vol.103 , pp. 211-218
    • Trezise, A.E.O.1    Cheung, B.2    Holmes, R.S.3    Beacham, I.R.4
  • 31
    • 0032931170 scopus 로고    scopus 로고
    • Evolution of class I alcohol dehydrogenase genes in catarrhine primates: gene conversion, substitution rates, and gene regulation
    • Cheung B, Holmes RS, Easteal S, Beacham IR, ((1999)) Evolution of class I alcohol dehydrogenase genes in catarrhine primates: gene conversion, substitution rates, and gene regulation. Mol Biol Evol 16:: 23--36.
    • (1999) Mol Biol Evol , vol.16 , pp. 23-36
    • Cheung, B.1    Holmes, R.S.2    Easteal, S.3    Beacham, I.R.4
  • 32
    • 33947595151 scopus 로고    scopus 로고
    • Conservative evolution in duplicated genes of the primate Class I ADH cluster
    • Oota H, Dunn CW, Speed WC, Pakstis AJ, Palmatier MA, et al. ((2007)) Conservative evolution in duplicated genes of the primate Class I ADH cluster. Gene Volume 392:: 64--76.
    • (2007) Gene Volume , vol.392 , pp. 64-76
    • Oota, H.1    Dunn, C.W.2    Speed, W.C.3    Pakstis, A.J.4    Palmatier, M.A.5
  • 33
    • 0035565654 scopus 로고    scopus 로고
    • Modern African ape populations as genetic and demographic models of the last common ancestor of humans, chimpanzees, and gorillas
    • Jensen-Seaman MI, Deinard AS, Kidd KK, ((2001)) Modern African ape populations as genetic and demographic models of the last common ancestor of humans, chimpanzees, and gorillas. J Heredity 92:: 475--480.
    • (2001) J Heredity , vol.92 , pp. 475-480
    • Jensen-Seaman, M.I.1    Deinard, A.S.2    Kidd, K.K.3
  • 34
    • 0036606898 scopus 로고    scopus 로고
    • Predicting functional divergence in protein evolution by site-specific rate shifts
    • Gaucher EA, Gu X, Miyamoto MM, Benner SA, ((2002)) Predicting functional divergence in protein evolution by site-specific rate shifts. Trends Biochem Sci 27:: 315--321.
    • (2002) Trends Biochem Sci , vol.27 , pp. 315-321
    • Gaucher, E.A.1    Gu, X.2    Miyamoto, M.M.3    Benner, S.A.4
  • 35
    • 0024839793 scopus 로고
    • Patterns of divergence in homologous proteins as indicators of tertiary and quaternary structure
    • Benner SA, ((1989)) Patterns of divergence in homologous proteins as indicators of tertiary and quaternary structure. Adv Enz Regul 28:: 219--236.
    • (1989) Adv Enz Regul , vol.28 , pp. 219-236
    • Benner, S.A.1
  • 36
    • 0031828113 scopus 로고    scopus 로고
    • Post-genomic science. Converting primary structure into physiological function
    • Benner SA, Trabesinger-Ruef N, Schreiber DR, ((1998)) Post-genomic science. Converting primary structure into physiological function. Adv Enzyme Regul 38:: 155--180.
    • (1998) Adv Enzyme Regul , vol.38 , pp. 155-180
    • Benner, S.A.1    Trabesinger-Ruef, N.2    Schreiber, D.R.3
  • 37
    • 0030455946 scopus 로고    scopus 로고
    • Ethnic differences in gastric sigma-alcohol dehydrogenase activity and ethanol first-pass metabolism
    • Dohmen K, Baraona E, Ishibashi H, Pozzato G, Moretti M, et al. ((1996)) Ethnic differences in gastric sigma-alcohol dehydrogenase activity and ethanol first-pass metabolism. Alcohol Clin Exp Res 20:: 1569--1576.
    • (1996) Alcohol Clin Exp Res , vol.20 , pp. 1569-1576
    • Dohmen, K.1    Baraona, E.2    Ishibashi, H.3    Pozzato, G.4    Moretti, M.5
  • 39
    • 84864423719 scopus 로고    scopus 로고
    • Duplicated Gene Evolution of the Primate Alcohol Dehydrogenase Family. Primatology Monographs (Series Editors: T. Matsuzawa & J. Yamagiwa) Post-Genome Biology of Primates, edited by H. Hirai, H. Imai, Y. Go Springer
    • Oota H, Kidd KK, ((2012)) Duplicated Gene Evolution of the Primate Alcohol Dehydrogenase Family. Primatology Monographs (Series Editors: T. Matsuzawa & J. Yamagiwa) Post-Genome Biology of Primates, edited by H. Hirai, H. Imai, Y. Go Springer. Tokyo, Dordrecht, Heidelberg, London, New York. pp. 149--161.
    • (2012) Tokyo, Dordrecht, Heidelberg, London, New York , pp. 149-161
    • Oota, H.1    Kidd, K.K.2
  • 40
    • 0035085550 scopus 로고    scopus 로고
    • Three-dimensional structures of the three human class I alcohol dehydrogenases
    • Niederhut MS, Gibbons BJ, Perez-Miller S, Hurley TD, ((2001)) Three-dimensional structures of the three human class I alcohol dehydrogenases. Protein Science 10:: 697--706.
    • (2001) Protein Science , vol.10 , pp. 697-706
    • Niederhut, M.S.1    Gibbons, B.J.2    Perez-Miller, S.3    Hurley, T.D.4
  • 41
    • 0021715188 scopus 로고
    • Human liver alcohol dehydrogenase: purification and kinetic characterization of the beta.2.beta.2,.beta.2.beta.1, alpha.beta.2, and beta.2.gamma.a oriental isoenzymes
    • Yin SJ, Bosron WF, Magnes LJ, Li TK, ((1984)) Human liver alcohol dehydrogenase: purification and kinetic characterization of the beta.2.beta.2,.beta.2.beta.1, alpha.beta.2, and beta.2.gamma.a oriental isoenzymes. Biochem 23:: 5847--5853.
    • (1984) Biochem , vol.23 , pp. 5847-5853
    • Yin, S.J.1    Bosron, W.F.2    Magnes, L.J.3    Li, T.K.4
  • 42
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3. Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP, ((2003)) MrBayes 3. Bayesian phylogenetic inference under mixed models. Bioinformatics 19:: 1572--1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 43
    • 0023375195 scopus 로고
    • The neighbor-joining method-a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M, ((1987)) The neighbor-joining method-a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:: 406--425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 44
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol
    • Tamura K, Dudley J, Nei M, Kumar S, ((2007)) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol. 24:: 1596--159.
    • (2007) , vol.24 , pp. 1159-1596
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 45
    • 3342920601 scopus 로고    scopus 로고
    • Prospects for inferring very large phylogenies by using the neighbor-joining method
    • Tamura K, Nei M, Kumar S, ((2004)) Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc Natl Acad Sci USA 101:: 11030--11035.
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 11030-11035
    • Tamura, K.1    Nei, M.2    Kumar, S.3
  • 46
    • 33645800220 scopus 로고    scopus 로고
    • Analysis of transitions at two-fold redundant sites in mammalian genomes. Transition redundant approach-to-equilibrium (TREx) distance metrics
    • Li T, Chamberlin SG, Caraco MD, Liberles DA, Gaucher EA, et al. ((2006)) Analysis of transitions at two-fold redundant sites in mammalian genomes. Transition redundant approach-to-equilibrium (TREx) distance metrics. BMC Evol Biol 6:: 25.
    • (2006) BMC Evol Biol , vol.6 , pp. 25
    • Li, T.1    Chamberlin, S.G.2    Caraco, M.D.3    Liberles, D.A.4    Gaucher, E.A.5
  • 47
    • 40449106663 scopus 로고    scopus 로고
    • Development and application of a phylogenomic toolkit: Resolving the evolutionary history of Madagascar's lemurs
    • Horvath JE, Weisrock DW, Embry SL, Fiorentino I, Balhoff JP, et al. ((2008)) Development and application of a phylogenomic toolkit: Resolving the evolutionary history of Madagascar's lemurs. Genome Res 18:: 489--499.
    • (2008) Genome Res , vol.18 , pp. 489-499
    • Horvath, J.E.1    Weisrock, D.W.2    Embry, S.L.3    Fiorentino, I.4    Balhoff, J.P.5
  • 48
    • 21244454414 scopus 로고    scopus 로고
    • Substantial regional variation in substitution rates in the human genome. Importance of GC content, gene density, and telomere-specific effects
    • Arndt PF, Hwa T, Petrov DA, ((2005)) Substantial regional variation in substitution rates in the human genome. Importance of GC content, gene density, and telomere-specific effects. J Mol Evol 60:: 748--763.
    • (2005) J Mol Evol , vol.60 , pp. 748-763
    • Arndt, P.F.1    Hwa, T.2    Petrov, D.A.3
  • 49
    • 0024356449 scopus 로고
    • Statistical tests for detecting gene concertions
    • Sawyer S, ((1989)) Statistical tests for detecting gene concertions. Mol Biol Evol 6:: 526--538.
    • (1989) Mol Biol Evol , vol.6 , pp. 526-538
    • Sawyer, S.1
  • 50
    • 0033590220 scopus 로고    scopus 로고
    • Possible emergence of new geminiviruses by frequent recombination
    • Padidam M, Sawyer S, Fauquet CM, ((1999)) Possible emergence of new geminiviruses by frequent recombination. Virology 265:: 218--225.
    • (1999) Virology , vol.265 , pp. 218-225
    • Padidam, M.1    Sawyer, S.2    Fauquet, C.M.3
  • 52
    • 77957243284 scopus 로고    scopus 로고
    • RDP3: a flexible and fast computer program for analyzing recombination Bioinformatics
    • Martin DP, Lemey P, Lott M, Moulton V, Posada D, et al. ((2010)) RDP3: a flexible and fast computer program for analyzing recombination Bioinformatics. 26:: 2462--2463.
    • (2010) , vol.26 , pp. 2462-2463
    • Martin, D.P.1    Lemey, P.2    Lott, M.3    Moulton, V.4    Posada, D.5
  • 54
    • 34547137028 scopus 로고    scopus 로고
    • Bonferroni and Šidák corrections for multiple comparisons
    • In N.J. Salkind (ed.), Thousand Oaks, CA: Sage
    • Abdi H (2007) Bonferroni and Šidák corrections for multiple comparisons. In N.J. Salkind (ed.). Encyclopedia of Measurement and Statistics. Thousand Oaks, CA: Sage.
    • (2007) Encyclopedia of Measurement and Statistics
    • Abdi, H.1
  • 55
    • 0036226603 scopus 로고    scopus 로고
    • BLAT-The BLAST-Like Alignment Tool
    • Kent JW, ((2002)) BLAT-The BLAST-Like Alignment Tool. Genome Res 12:: 656--664.
    • (2002) Genome Res , vol.12 , pp. 656-664
    • Kent, J.W.1
  • 57
    • 68249102048 scopus 로고    scopus 로고
    • Evolution and survival on eutherian sex chromosomes
    • Wilson MA, Makova KD, ((2009)) Evolution and survival on eutherian sex chromosomes. PLoS Genetics 5:: 1--11.
    • (2009) PLoS Genetics , vol.5 , pp. 1-11
    • Wilson, M.A.1    Makova, K.D.2
  • 59
    • 0024440685 scopus 로고
    • Evolution of the major histocompatibility complex. Independent origins of nonclassical Class I genes in different groups of mammals
    • Hughes AL, Nei M, ((1989)) Evolution of the major histocompatibility complex. Independent origins of nonclassical Class I genes in different groups of mammals. Mol Biol Evol 6:: 559--579.
    • (1989) Mol Biol Evol , vol.6 , pp. 559-579
    • Hughes, A.L.1    Nei, M.2
  • 60
    • 14044278843 scopus 로고    scopus 로고
    • Sotos syndrome common deletion is mediated by directly oriented subunits within inverted Sos-REP low-copy repeats
    • Kutotaki N, Stankiewicz P, Wakui K, Niikawa N, Lupski RJ, ((2005)) Sotos syndrome common deletion is mediated by directly oriented subunits within inverted Sos-REP low-copy repeats. Hum Mol Genet 14:: 535--542.
    • (2005) Hum Mol Genet , vol.14 , pp. 535-542
    • Kutotaki, N.1    Stankiewicz, P.2    Wakui, K.3    Niikawa, N.4    Lupski, R.J.5
  • 61
    • 0018952782 scopus 로고
    • Human fetal Ggamma- and Agamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes
    • Slightom JL, Blechl AE, Smithies O, ((1980)) Human fetal Ggamma- and Agamma-globin genes: complete nucleotide sequences suggest that DNA can be exchanged between these duplicated genes. Cell 21:: 627--638.
    • (1980) Cell , vol.21 , pp. 627-638
    • Slightom, J.L.1    Blechl, A.E.2    Smithies, O.3
  • 62
    • 0032862870 scopus 로고    scopus 로고
    • Primate evolution of an olfactory receptor cluster: diversification by gene conversion and recent emergence of pseudogenes
    • Sharon D, Glusman G, Pilpel Y, Khen M, Gruetzner F, et al. ((1999)) Primate evolution of an olfactory receptor cluster: diversification by gene conversion and recent emergence of pseudogenes. Genomics 61:: 24--36.
    • (1999) Genomics , vol.61 , pp. 24-36
    • Sharon, D.1    Glusman, G.2    Pilpel, Y.3    Khen, M.4    Gruetzner, F.5
  • 64
    • 0032826401 scopus 로고    scopus 로고
    • Detecting and characterizing gene conversions between multigene family members
    • Drouin G, Prat F, Ell M, Clarke GD, ((1999)) Detecting and characterizing gene conversions between multigene family members. Mol Biol Evol 16:: 1369--1390.
    • (1999) Mol Biol Evol , vol.16 , pp. 1369-1390
    • Drouin, G.1    Prat, F.2    Ell, M.3    Clarke, G.D.4
  • 65
    • 10344262074 scopus 로고    scopus 로고
    • Phylogeny and substitution rates of angiosperm actin genes
    • Moniz de Sá M, Drouin G, ((1996)) Phylogeny and substitution rates of angiosperm actin genes. Mol Biol Evol 13:: 1198--1212.
    • (1996) Mol Biol Evol , vol.13 , pp. 1198-1212
    • Moniz de Sá, M.1    Drouin, G.2
  • 66
    • 0025070107 scopus 로고
    • Molecular history of gene conversions in the primate fetal gamma globin genes
    • Fitch DHA, Mainone C, Goodman M, Slightom JL, ((1990)) Molecular history of gene conversions in the primate fetal gamma globin genes. J Biol Chem 265:: 781--793.
    • (1990) J Biol Chem , vol.265 , pp. 781-793
    • Fitch, D.H.A.1    Mainone, C.2    Goodman, M.3    Slightom, J.L.4
  • 67
    • 33748062945 scopus 로고    scopus 로고
    • Duplication and divergence of 2 distinct pancreatic ribonuclease genes in leaf-eating African and Asian colobine monkeys
    • Schienman JE, Holt RA, Auerbach MR, Stewart CB, ((2006)) Duplication and divergence of 2 distinct pancreatic ribonuclease genes in leaf-eating African and Asian colobine monkeys. Mol Biol Evol 2006 23:: 1465--1479.
    • (2006) Mol Biol Evol 2006 , vol.23 , pp. 1465-1479
    • Schienman, J.E.1    Holt, R.A.2    Auerbach, M.R.3    Stewart, C.B.4
  • 68
    • 58049170975 scopus 로고    scopus 로고
    • Evolution of RNases in leaf monkeys: being parallel gene duplications or parallel gene conversions is a problem of molecular phylogeny
    • Xu L, Su Z, Gu Z, Gu X, ((2009)) Evolution of RNases in leaf monkeys: being parallel gene duplications or parallel gene conversions is a problem of molecular phylogeny. Mol Phylogenet Evol 50:: 397--400.
    • (2009) Mol Phylogenet Evol , vol.50 , pp. 397-400
    • Xu, L.1    Su, Z.2    Gu, Z.3    Gu, X.4
  • 69
    • 69049110789 scopus 로고    scopus 로고
    • Origins of digestive RNases in leaf monkeys are an open question
    • Su Z, Xu L, Gu Z, ((2009)) Origins of digestive RNases in leaf monkeys are an open question. Mol Phylogenet Evol 53:: 610--61.
    • (2009) Mol Phylogenet Evol , vol.53 , pp. 610-661
    • Su, Z.1    Xu, L.2    Gu, Z.3
  • 70
    • 33745543629 scopus 로고    scopus 로고
    • Parallel adaptive origins of digestive RNases in Asian and African leaf monkeys
    • Zhang J, ((2006)) Parallel adaptive origins of digestive RNases in Asian and African leaf monkeys. Nat Genet 2006 38:: 819--823.
    • (2006) Nat Genet 2006 , vol.38 , pp. 819-823
    • Zhang, J.1
  • 71
    • 69049108574 scopus 로고    scopus 로고
    • Phylogenetic evidence for parallel adaptive orgins of digestive RNases in Asian and African leaf monkeys: A response to Xu, et al
    • Zhang J, ((2009)) Phylogenetic evidence for parallel adaptive orgins of digestive RNases in Asian and African leaf monkeys: A response to Xu, et al. Mol Phylogenet Evol 53:: 609--610.
    • (2009) Mol Phylogenet Evol , vol.53 , pp. 609-610
    • Zhang, J.1
  • 72
    • 72649094381 scopus 로고    scopus 로고
    • Adaptive Evolution of Digestive RNASE1 Genes in Leaf-Eating Monkeys Revisited: New Insights from Ten Additional Colobines
    • Yu L, Wang X, Jin W, Luan P, Ting N, et al. ((2010)) Adaptive Evolution of Digestive RNASE1 Genes in Leaf-Eating Monkeys Revisited: New Insights from Ten Additional Colobines. Mol Biol Evol 27:: 121--131.
    • (2010) Mol Biol Evol , vol.27 , pp. 121-131
    • Yu, L.1    Wang, X.2    Jin, W.3    Luan, P.4    Ting, N.5
  • 73
    • 0017252952 scopus 로고
    • Three-dimensional structure of horse liver alcohol dehydrogenase at 2.4 Å resolution
    • Eklund H, Nordström B, Zeppezauer E, Söderlund G, Ohlsson I,et al. (1976) Three-dimensional structure of horse liver alcohol dehydrogenase at 2.4 Å resolution. J. Mol. Biol. 102, 27-59.
    • (1976) J. Mol. Biol , vol.102 , pp. 27-59
    • Eklund, H.1    Nordström, B.2    Zeppezauer, E.3    Söderlund, G.4    Ohlsson, I.5
  • 74
    • 4744349653 scopus 로고    scopus 로고
    • Structure of three class I human alcohol dehydrogenases complexed with isoenzyme specific formamide inhibitors
    • Gibbons BJ, Hurley TD, ((2004)) Structure of three class I human alcohol dehydrogenases complexed with isoenzyme specific formamide inhibitors. Biochemistry 43:: 12555--12562.
    • (2004) Biochemistry , vol.43 , pp. 12555-12562
    • Gibbons, B.J.1    Hurley, T.D.2


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