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Volumn 158, Issue 1, 2012, Pages 14-22

IS30 elements are mediators of genetic diversity in Oenococcus oeni

Author keywords

Genetic heterogeneity; Insertion element; Malolactic fermentation; Molecular typing; Oenococcus oeni

Indexed keywords

ARTICLE; BACTERIAL GENOME; GENE INSERTION SEQUENCE; GENE TRANSFER; GENETIC VARIABILITY; INVERSE POLYMERASE CHAIN REACTION; IS30 GENE; LACTIC ACID BACTERIUM; MULTILOCUS SEQUENCE TYPING; NONHUMAN; NUCLEOTIDE SEQUENCE; OENOCOCCUS OENI; RNA PROCESSING;

EID: 84864386053     PISSN: 01681605     EISSN: 18793460     Source Type: Journal    
DOI: 10.1016/j.ijfoodmicro.2012.06.009     Document Type: Article
Times cited : (9)

References (37)
  • 1
    • 15744405124 scopus 로고    scopus 로고
    • The Bgl sensory system: a transmembrane signaling pathway controlling transcriptional antitermination
    • Amster-Choder O. The Bgl sensory system: a transmembrane signaling pathway controlling transcriptional antitermination. Current Opinion in Microbiology 2005, 8:127-134.
    • (2005) Current Opinion in Microbiology , vol.8 , pp. 127-134
    • Amster-Choder, O.1
  • 3
    • 82355175935 scopus 로고    scopus 로고
    • Genomic variations of Oenococcus oeni strains and the potential to impact on malolactic fermentation and aroma compounds in wine
    • Bartowsky E.J., Borneman A.R. Genomic variations of Oenococcus oeni strains and the potential to impact on malolactic fermentation and aroma compounds in wine. Applied Microbiology and Biotechnology 2011, 92:441-447.
    • (2011) Applied Microbiology and Biotechnology , vol.92 , pp. 441-447
    • Bartowsky, E.J.1    Borneman, A.R.2
  • 4
    • 61649114012 scopus 로고    scopus 로고
    • Multilocus sequence typing of Oenococcus oeni: detection of two subpopulations shaped by intergenic recombination
    • Bilhere E., Lucas P.M., Claisse O., Lonvaud-Funel A. Multilocus sequence typing of Oenococcus oeni: detection of two subpopulations shaped by intergenic recombination. Applied and Environmental Microbiology 2009, 75:1291-1300.
    • (2009) Applied and Environmental Microbiology , vol.75 , pp. 1291-1300
    • Bilhere, E.1    Lucas, P.M.2    Claisse, O.3    Lonvaud-Funel, A.4
  • 6
    • 0038105063 scopus 로고    scopus 로고
    • IS981-mediated adaptive evolution recovers lactate production by ldhB transcription activation in a lactate dehydrogenase-deficient strain of Lactococcus lactis
    • Bongers R.S., Hoefnagel M.H., Starrenburg M.J., Siemerink M.A., Arends J.G., Hugenholtz J., Kleerebezem M. IS981-mediated adaptive evolution recovers lactate production by ldhB transcription activation in a lactate dehydrogenase-deficient strain of Lactococcus lactis. Journal of Bacteriology 2003, 185:4499-4507.
    • (2003) Journal of Bacteriology , vol.185 , pp. 4499-4507
    • Bongers, R.S.1    Hoefnagel, M.H.2    Starrenburg, M.J.3    Siemerink, M.A.4    Arends, J.G.5    Hugenholtz, J.6    Kleerebezem, M.7
  • 7
    • 77249131696 scopus 로고    scopus 로고
    • Genotypic diversity in Oenococcus oeni by high-density microarray comparative genome hybridization and whole genome sequencing
    • Borneman A.R., Bartowsky E.J., McCarthy J., Chambers P.J. Genotypic diversity in Oenococcus oeni by high-density microarray comparative genome hybridization and whole genome sequencing. Applied Microbiology and Biotechnology 2010, 86:681-691.
    • (2010) Applied Microbiology and Biotechnology , vol.86 , pp. 681-691
    • Borneman, A.R.1    Bartowsky, E.J.2    McCarthy, J.3    Chambers, P.J.4
  • 9
    • 0033008135 scopus 로고    scopus 로고
    • Presence and analysis of large plasmids in Oenococcus oeni
    • Brito L., Paveia H. Presence and analysis of large plasmids in Oenococcus oeni. Plasmid 1999, 41:260-267.
    • (1999) Plasmid , vol.41 , pp. 260-267
    • Brito, L.1    Paveia, H.2
  • 10
    • 10844250172 scopus 로고    scopus 로고
    • Insertion-sequence-mediated mutations isolated during adaptation to growth and starvation in Lactococcus lactis
    • De Visser J.A., Akkermans A.D.L., Hoekstra R.F., de Vos W.M. Insertion-sequence-mediated mutations isolated during adaptation to growth and starvation in Lactococcus lactis. Genetics 2004, 168:1145-1157.
    • (2004) Genetics , vol.168 , pp. 1145-1157
    • De Visser, J.A.1    Akkermans, A.D.L.2    Hoekstra, R.F.3    de Vos, W.M.4
  • 11
    • 46949089096 scopus 로고    scopus 로고
    • Studies on gtf, a glucosyltransferase gene in the genome of Pediococcus parvulus and Oenococcus oeni, two bacterial species commonly found in wine
    • Dols-Lafargue M., Lee H.Y., Le Marrec C., Heyraud A., Chambat G., Lonvaud-Funel A. Studies on gtf, a glucosyltransferase gene in the genome of Pediococcus parvulus and Oenococcus oeni, two bacterial species commonly found in wine. Applied and Environmental Microbiology 2008, 74:4079-4090.
    • (2008) Applied and Environmental Microbiology , vol.74 , pp. 4079-4090
    • Dols-Lafargue, M.1    Lee, H.Y.2    Le Marrec, C.3    Heyraud, A.4    Chambat, G.5    Lonvaud-Funel, A.6
  • 13
    • 64349102078 scopus 로고    scopus 로고
    • Regulation of natural genetic transformation and acquisition of transforming DNA in Streptococcus pneumoniae
    • Johnsborg O., Håvarstein L.S. Regulation of natural genetic transformation and acquisition of transforming DNA in Streptococcus pneumoniae. FEMS Microbiology Reviews 2009, 33:627-642.
    • (2009) FEMS Microbiology Reviews , vol.33 , pp. 627-642
    • Johnsborg, O.1    Håvarstein, L.S.2
  • 14
    • 33947237837 scopus 로고    scopus 로고
    • Transposition and target specificity of the typical IS30 family element IS1655 from Neisseria meningitidis
    • Kiss J., Nagy Z., Tóth G., Kiss G.B., Jakab J., Chandler M., Olasz F. Transposition and target specificity of the typical IS30 family element IS1655 from Neisseria meningitidis. Molecular Microbiology 2007, 63:1731-1747.
    • (2007) Molecular Microbiology , vol.63 , pp. 1731-1747
    • Kiss, J.1    Nagy, Z.2    Tóth, G.3    Kiss, G.B.4    Jakab, J.5    Chandler, M.6    Olasz, F.7
  • 15
    • 34447334797 scopus 로고    scopus 로고
    • Multiple interactions among the competence proteins of Bacillus subtilis
    • Kramer N., Hahn J., Dubnau D. Multiple interactions among the competence proteins of Bacillus subtilis. Molecular Microbiology 2007, 65:454-464.
    • (2007) Molecular Microbiology , vol.65 , pp. 454-464
    • Kramer, N.1    Hahn, J.2    Dubnau, D.3
  • 18
    • 80054924852 scopus 로고    scopus 로고
    • Do phages efficiently shuttle transposable elements among prokaryotes?
    • Leclercq S., Cordaux R. Do phages efficiently shuttle transposable elements among prokaryotes?. Evolution 2011, 65:3327-3331.
    • (2011) Evolution , vol.65 , pp. 3327-3331
    • Leclercq, S.1    Cordaux, R.2
  • 19
    • 33750344923 scopus 로고    scopus 로고
    • Streamlining and simplification of microbial genome architecture
    • Lynch M. Streamlining and simplification of microbial genome architecture. Annual Review of Microbiology 2006, 60:327-349.
    • (2006) Annual Review of Microbiology , vol.60 , pp. 327-349
    • Lynch, M.1
  • 20
    • 64549108517 scopus 로고    scopus 로고
    • Molecular characterization of newly identified IS3, IS4 and IS30 insertion sequence-like elements in Mycoplasma bovis and their possible roles in genome plasticity
    • Lysnyansky I., Calcutt M.J., Ben-Barak I., Ron Y., Levisohn S., Methé B.A., Yogev D. Molecular characterization of newly identified IS3, IS4 and IS30 insertion sequence-like elements in Mycoplasma bovis and their possible roles in genome plasticity. FEMS Microbiology Letters 2009, 294:172-182.
    • (2009) FEMS Microbiology Letters , vol.294 , pp. 172-182
    • Lysnyansky, I.1    Calcutt, M.J.2    Ben-Barak, I.3    Ron, Y.4    Levisohn, S.5    Methé, B.A.6    Yogev, D.7
  • 25
  • 26
    • 0142040874 scopus 로고    scopus 로고
    • ISLpl1 is a functional IS30-related insertion element in Lactobacillus plantarum that is also found in other lactic acid bacteria
    • Nicoloff H., Bringel F. ISLpl1 is a functional IS30-related insertion element in Lactobacillus plantarum that is also found in other lactic acid bacteria. Applied and Environmental Microbiology 2003, 69:6032-6040.
    • (2003) Applied and Environmental Microbiology , vol.69 , pp. 6032-6040
    • Nicoloff, H.1    Bringel, F.2
  • 28
    • 69949095870 scopus 로고    scopus 로고
    • Inference of the impact of insertion sequence (IS) elements on bacterial genome diversification through analysis of small-size structural polymorphisms in Escherichia coli O157 genomes
    • Ooka T., Ogura Y., Asadulghani M., Ohnishi M., Nakayama K., Terajima J., Watanabe H., Hayashi T. Inference of the impact of insertion sequence (IS) elements on bacterial genome diversification through analysis of small-size structural polymorphisms in Escherichia coli O157 genomes. Genome Research 2009, 19:1809-1816.
    • (2009) Genome Research , vol.19 , pp. 1809-1816
    • Ooka, T.1    Ogura, Y.2    Asadulghani, M.3    Ohnishi, M.4    Nakayama, K.5    Terajima, J.6    Watanabe, H.7    Hayashi, T.8
  • 29
    • 77958485910 scopus 로고    scopus 로고
    • Intergenic transposable elements are not randomly distributed in bacteria
    • Plague G.R. Intergenic transposable elements are not randomly distributed in bacteria. Genome Biology and Evolution 2010, 2:584-590.
    • (2010) Genome Biology and Evolution , vol.2 , pp. 584-590
    • Plague, G.R.1
  • 30
    • 78650305634 scopus 로고    scopus 로고
    • What traits are carried on mobile genetic elements and why?
    • Rankin D.J., Rocha E.P.C., Brown S.P. What traits are carried on mobile genetic elements and why?. Heredity 2011, 106:1-10.
    • (2011) Heredity , vol.106 , pp. 1-10
    • Rankin, D.J.1    Rocha, E.P.C.2    Brown, S.P.3
  • 32
    • 34047240364 scopus 로고    scopus 로고
    • Causes of insertion sequences abundance in prokaryotic genomes
    • Touchon M., Rocha E.P. Causes of insertion sequences abundance in prokaryotic genomes. Molecular Biology and Evolution 2007, 24:969-981.
    • (2007) Molecular Biology and Evolution , vol.24 , pp. 969-981
    • Touchon, M.1    Rocha, E.P.2
  • 34
    • 33644899969 scopus 로고    scopus 로고
    • Periodic extinctions of transposable elements in bacterial lineages: evidence from intragenomic variation in multiple genomes
    • Wagner A. Periodic extinctions of transposable elements in bacterial lineages: evidence from intragenomic variation in multiple genomes. Molecular Biology and Evolution 2006, 23:723-733.
    • (2006) Molecular Biology and Evolution , vol.23 , pp. 723-733
    • Wagner, A.1
  • 35
    • 34548764905 scopus 로고    scopus 로고
    • A survey of bacterial insertion sequences using IScan
    • Wagner A., Lewis C., Bichsel M. A survey of bacterial insertion sequences using IScan. Nucleic Acids Research 2007, 35:5284-5293.
    • (2007) Nucleic Acids Research , vol.35 , pp. 5284-5293
    • Wagner, A.1    Lewis, C.2    Bichsel, M.3
  • 36
    • 63149111477 scopus 로고    scopus 로고
    • Genome organization in Oenococcus oeni strains studied by comparison of physical and genetic maps
    • Zé-Zé L., Chelo I.M., Tenreiro R. Genome organization in Oenococcus oeni strains studied by comparison of physical and genetic maps. International Microbiology 2008, 11:237-244.
    • (2008) International Microbiology , vol.11 , pp. 237-244
    • Zé-Zé, L.1    Chelo, I.M.2    Tenreiro, R.3
  • 37
    • 78549296762 scopus 로고    scopus 로고
    • LAB-secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of lactic acid bacteria
    • Zhou M., Theunissen D., Wels M., Siezen R.J. LAB-secretome: a genome-scale comparative analysis of the predicted extracellular and surface-associated proteins of lactic acid bacteria. BMC Genomics 2010, 11:651.
    • (2010) BMC Genomics , vol.11 , pp. 651
    • Zhou, M.1    Theunissen, D.2    Wels, M.3    Siezen, R.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.