메뉴 건너뛰기




Volumn 37, Issue 3, 2012, Pages 539-552

RNA targeting by small molecules: Binding of protoberberine, benzophenanthridine and aristolochia alkaloids to various RNA structures

Author keywords

Biophysical studies; RNA structures; RNA world; RNA alkaloid interaction

Indexed keywords

ALKALOID; ARISTOLOCHIA ALKALOID; ARISTOLOLACTAM BETA GLUCOSIDE; BENZOPHENANTHRIDINE; BERBERINE; CORALYNE; DOUBLE STRANDED RNA; PALMATAINE; POLYADENYLIC ACID; POLYURIDYLIC ACID; PROTOBERBERINE; SANGUINARINE; SINGLE STRANDED RNA; TRANSFER RNA; UNCLASSIFIED DRUG;

EID: 84864364001     PISSN: 02505991     EISSN: 09737138     Source Type: Journal    
DOI: 10.1007/s12038-012-9217-3     Document Type: Conference Paper
Times cited : (31)

References (78)
  • 1
    • 79953751999 scopus 로고    scopus 로고
    • Therapeutic potential of nucleic acid binding isoquinolines alkaloids: Binding aspects and implications for drug design
    • Bhadra K and Suresh Kumar G 2011 Therapeutic potential of nucleic acid binding isoquinolines alkaloids: binding aspects and implications for drug design. Med. Res. Rev. 31 821-862
    • (2011) Med. Res. Rev. , vol.31 , pp. 821-862
    • Bhadra, K.1    Suresh Kumar, G.2
  • 2
    • 77950492274 scopus 로고    scopus 로고
    • New aspects of the interaction of the antibiotic coralyne with RNA: Coralyne induces triple helix formation in poly(rA).poly(rU)
    • Biver T, Boggioni A, Garcia B, Leal JM, Ruis R, Secco F and Venturini M 2009 New aspects of the interaction of the antibiotic coralyne with RNA: coralyne induces triple helix formation in poly(rA).poly(rU). Nucleic Acids Res. 38 1697-1710
    • (2009) Nucleic Acids Res. , vol.38 , pp. 1697-1710
    • Biver, T.1    Boggioni, A.2    Garcia, B.3    Leal, J.M.4    Ruis, R.5    Secco, F.6    Venturini, M.7
  • 4
    • 0025312054 scopus 로고
    • Natural products as a source of potential cancer chemotherapeutic and chemopreventive agents
    • Cassady JM, Baird WM and Chang CJ 1990 Natural products as a source of potential cancer chemotherapeutic and chemopreventive agents. J. Nat. Prod. 53 23-41
    • (1990) J. Nat. Prod. , vol.53 , pp. 23-41
    • Cassady, J.M.1    Baird, W.M.2    Chang, C.J.3
  • 5
    • 59649117144 scopus 로고    scopus 로고
    • Molecular recognition of poly(A) by small ligands: An alternative method of analysis reveals nanomolar, cooperative and shape-selective binding
    • Centikol P and Hud NV 2009 Molecular recognition of poly(A) by small ligands: an alternative method of analysis reveals nanomolar, cooperative and shape-selective binding. Nucleic Acids Res. 37 611-621
    • (2009) Nucleic Acids Res. , vol.37 , pp. 611-621
    • Centikol, P.1    Hud, N.V.2
  • 6
    • 34247395439 scopus 로고    scopus 로고
    • Monitoring aminoglycoside-induced conformational changes in 16 S rRNA through acrylamide quenching
    • Chao PW and Chow CS 2007 Monitoring aminoglycoside-induced conformational changes in 16 S rRNA through acrylamide quenching. Bioorg. Med. Chem. 15 3825-3831
    • (2007) Bioorg. Med. Chem. , vol.15 , pp. 3825-3831
    • Chao, P.W.1    Chow, C.S.2
  • 7
    • 0037386852 scopus 로고    scopus 로고
    • Spectroscopic and thermodynamic studies on the binding of sanguinarine and berberine to triple and double helical DNA
    • Das S, Suresh Kumar G, Ray A and Maiti M 2003 Spectroscopic and thermodynamic studies on the binding of sanguinarine and berberine to triple and double helical DNA. J. Biomol. Struct. Dyn. 20 703-713
    • (2003) J. Biomol. Struct. Dyn. , vol.20 , pp. 703-713
    • Das, S.1    Suresh Kumar, G.2    Ray, A.3    Maiti, M.4
  • 8
    • 79953081932 scopus 로고    scopus 로고
    • Interaction of aristololactam-β-D-glucoside and daunomycin with poly(A): Spectroscopic and calorimetric studies
    • Das A, Bhadra K, Achari B, Chakraborty P and Suresh Kumar G 2011a Interaction of aristololactam-β-D-glucoside and daunomycin with poly(A): spectroscopic and calorimetric studies. Biophys. Chem. 155 10-19
    • (2011) Biophys. Chem. , vol.155 , pp. 10-19
    • Das, A.1    Bhadra, K.2    Achari, B.3    Chakraborty, P.4    Suresh Kumar, G.5
  • 9
    • 80051675861 scopus 로고    scopus 로고
    • Targeting RNA by small molecules: Comparative structural and thermodynamic aspects of aristololactam-β-D-glucoside and daunomycin binding to tRNAphe
    • Das A, Bhadra K and Suresh Kumar G 2011b Targeting RNA by small molecules: comparative structural and thermodynamic aspects of aristololactam-β-D-glucoside and daunomycin binding to tRNAphe. PLoS ONE 6 e23186
    • (2011) PLoS ONE , vol.6
    • Das, A.1    Bhadra, K.2    Suresh Kumar, G.3
  • 10
    • 0024805768 scopus 로고
    • DNA intercalating ligands as anticancer drugs: Prospects for future design
    • Denny WA 1989 DNA intercalating ligands as anticancer drugs: prospects for future design. Anticancer Drug Des. 4 241-263
    • (1989) Anticancer Drug Des. , vol.4 , pp. 241-263
    • Denny, W.A.1
  • 11
    • 34248634004 scopus 로고    scopus 로고
    • Therapeutic potential for micro RNAs
    • Esau CC and Monia BP 2007 Therapeutic potential for micro RNAs. Adv. Drug Deliv. Rev. 59 101-114
    • (2007) Adv. Drug Deliv. Rev. , vol.59 , pp. 101-114
    • Esau, C.C.1    Monia, B.P.2
  • 12
    • 33947470407 scopus 로고
    • Formation of a three stranded polynucleotide molecule
    • Felsenfeld G, Davies DR and Rich A 1957 Formation of a three stranded polynucleotide molecule. J. Am. Chem. Soc. 79 2023-2024
    • (1957) J. Am. Chem. Soc. , vol.79 , pp. 2023-2024
    • Felsenfeld, G.1    Davies, D.R.2    Rich, A.3
  • 13
    • 34848857313 scopus 로고    scopus 로고
    • Gene silencing by double-stranded RNA (Nobel Lecture)
    • Fire AZ 2007 Gene silencing by double-stranded RNA (Nobel Lecture). Angew. Chem. Int. Ed. 46 6966-6984
    • (2007) Angew. Chem. Int. Ed. , vol.46 , pp. 6966-6984
    • Fire, A.Z.1
  • 15
    • 76649139475 scopus 로고    scopus 로고
    • Molecular recognition of RNA: Challenges for modelling interactions and plasticity
    • Fulle S and Gohlke H 2010 Molecular recognition of RNA: challenges for modelling interactions and plasticity. J. Mol. Recognit. 23 220-231
    • (2010) J. Mol. Recognit. , vol.23 , pp. 220-231
    • Fulle, S.1    Gohlke, H.2
  • 16
    • 0034783659 scopus 로고    scopus 로고
    • Targeting RNA with small-molecule drugs: Therapeutic opportunities and chemical challenges
    • Gallego J and Varani G 2001 Targeting RNA with small-molecule drugs: therapeutic opportunities and chemical challenges. Acc. Chem. Res. 34 836-843
    • (2001) Acc. Chem. Res. , vol.34 , pp. 836-843
    • Gallego, J.1    Varani, G.2
  • 17
    • 34547840328 scopus 로고    scopus 로고
    • Specific binding and selfstructure induction to poly(A) by the cytotoxic plant alkaloid sanguinarine
    • Giri P and Suresh Kumar G 2007 Specific binding and selfstructure induction to poly(A) by the cytotoxic plant alkaloid sanguinarine. Biochim. Biophys. Acta 1770 1419-1426
    • (2007) Biochim. Biophys. Acta , vol.1770 , pp. 1419-1426
    • Giri, P.1    Suresh Kumar, G.2
  • 18
    • 44149108423 scopus 로고    scopus 로고
    • Self-structure induction in single stranded poly(A) by small molecules: Studies on DNA intercalators, partial intercalators and groove binding molecules
    • Giri P and Suresh Kumar G 2008a Self-structure induction in single stranded poly(A) by small molecules: studies on DNA intercalators, partial intercalators and groove binding molecules. Arch. Biochem. Biophys. 474 183-192
    • (2008) Arch. Biochem. Biophys. , vol.474 , pp. 183-192
    • Giri, P.1    Suresh Kumar, G.2
  • 19
    • 38749106626 scopus 로고    scopus 로고
    • Spectroscopic and calorimetric studies on the binding of the phototoxic and cytotoxic plant alkaloid sanguinarine with double helical poly(A)
    • Giri P and Suresh Kumar G 2008b Spectroscopic and calorimetric studies on the binding of the phototoxic and cytotoxic plant alkaloid sanguinarine with double helical poly(A). J. Photochem. Photobiol. A Chem. 194 111-121
    • (2008) J. Photochem. Photobiol. A Chem. , vol.194 , pp. 111-121
    • Giri, P.1    Suresh Kumar, G.2
  • 20
    • 41049107618 scopus 로고    scopus 로고
    • Binding of protoberberines alkaloid coralyne with double stranded poly(A): A biophysical study
    • Giri P and Suresh Kumar G 2008c Binding of protoberberines alkaloid coralyne with double stranded poly(A): a biophysical study. Mol. BioSyst. 4 341-348
    • (2008) Mol. BioSyst. , vol.4 , pp. 341-348
    • Giri, P.1    Suresh Kumar, G.2
  • 21
    • 65649086094 scopus 로고    scopus 로고
    • Molecular aspects of small molecules-poly(A) interaction: An approach to RNA based drug design
    • Giri P and Suresh Kumar G 2009 Molecular aspects of small molecules-poly(A) interaction: an approach to RNA based drug design. Curr. Med. Chem. 16 965-987
    • (2009) Curr. Med. Chem. , vol.16 , pp. 965-987
    • Giri, P.1    Suresh Kumar, G.2
  • 22
    • 72949086394 scopus 로고    scopus 로고
    • Molecular recognition of poly (A) targeting by protoberberine alkaloids: In vitro biophysical studies and biological perspectives
    • Giri P and Suresh Kumar G 2010a Molecular recognition of poly (A) targeting by protoberberine alkaloids: in vitro biophysical studies and biological perspectives. Mol. BioSyst. 6 81-88
    • (2010) Mol. BioSyst. , vol.6 , pp. 81-88
    • Giri, P.1    Suresh Kumar, G.2
  • 23
    • 77955952570 scopus 로고    scopus 로고
    • Isoquinoline alkaloids andtheir binding with polyadenylic acid: Potential basis of therapeutic action
    • Giri P and Suresh Kumar G 2010b Isoquinoline alkaloids andtheir binding with polyadenylic acid: potential basis of therapeutic action. Mini Rev. Med. Chem. 10 568-577
    • (2010) Mini Rev. Med. Chem. , vol.10 , pp. 568-577
    • Giri, P.1    Suresh Kumar, G.2
  • 24
    • 33644988048 scopus 로고    scopus 로고
    • RNA specific molecules: Cytotoxic plant alkaloid palmatine binds strongly to poly(A)
    • Giri P, Hossain M and Suresh Kumar G 2006a RNA specific molecules: cytotoxic plant alkaloid palmatine binds strongly to poly(A). Bioorg. Med. Chem. Lett. 16 2364-2368
    • (2006) Bioorg. Med. Chem. Lett. , vol.16 , pp. 2364-2368
    • Giri, P.1    Hossain, M.2    Suresh Kumar, G.3
  • 25
    • 33750167675 scopus 로고    scopus 로고
    • Molecular aspects on the specific interaction of cytotoxic plant alkaloid palmatine to poly(A)
    • Giri P, Hossain M and Suresh Kumar G 2006b Molecular aspects on the specific interaction of cytotoxic plant alkaloid palmatine to poly(A). Int. J. Biol. Macromol. 39 210-221
    • (2006) Int. J. Biol. Macromol. , vol.39 , pp. 210-221
    • Giri, P.1    Hossain, M.2    Suresh Kumar, G.3
  • 26
    • 0033806243 scopus 로고    scopus 로고
    • Intercalative binding of small molecules to nucleic acids
    • Graves D E and Velea LM 2000 Intercalative binding of small molecules to nucleic acids. Curr. Org. Chem. 4 915-929
    • (2000) Curr. Org. Chem. , vol.4 , pp. 915-929
    • Graves, D.E.1    Velea, L.M.2
  • 27
    • 33845898831 scopus 로고    scopus 로고
    • Quaternary protoberberine alkaloids
    • Grycova L, Dostal J and Marek R 2007 Quaternary protoberberine alkaloids. Phytochemistry 68 150-175
    • (2007) Phytochemistry , vol.68 , pp. 150-175
    • Grycova, L.1    Dostal, J.2    Marek, R.3
  • 28
    • 0029175661 scopus 로고
    • Translation-targeted therapeutics for viral diseases
    • Harford JB 1995 Translation-targeted therapeutics for viral diseases. Gene Expr. 4 357-367
    • (1995) Gene Expr. , vol.4 , pp. 357-367
    • Harford, J.B.1
  • 29
    • 0036761206 scopus 로고    scopus 로고
    • Rational ligand design for RNA: The role of static structure and conformational flexibility in target recognition
    • Hermann T 2002 Rational ligand design for RNA: The role of static structure and conformational flexibility in target recognition. Biochimie 84 869-875
    • (2002) Biochimie , vol.84 , pp. 869-875
    • Hermann, T.1
  • 30
    • 84863880460 scopus 로고    scopus 로고
    • Binding of the anticancer alkaloid sanguinarine to tRNAphe: Spectroscopic and calorimetric studies
    • Hossain M, Kabir A and Suresh Kumar G 2012a Binding of the anticancer alkaloid sanguinarine to tRNAphe: spectroscopic and calorimetric studies J. Biomol. Struct. Dyn. 30 215-225
    • (2012) J. Biomol. Struct. Dyn. , vol.30 , pp. 215-225
    • Hossain, M.1    Kabir, A.2    Suresh Kumar, G.3
  • 31
    • 80054873574 scopus 로고    scopus 로고
    • Binding of the phenothiazinium dye methylene blue with single stranded polyriboadenylic acid
    • Hossain M, Kabir A and Suresh Kumar G 2012b Binding of the phenothiazinium dye methylene blue with single stranded polyriboadenylic acid. Dyes Pigments 92 1376-1383
    • (2012) Dyes Pigments , vol.92 , pp. 1376-1383
    • Hossain, M.1    Kabir, A.2    Suresh Kumar, G.3
  • 32
    • 0036519363 scopus 로고    scopus 로고
    • DNA and its associated processes as targets for cancer therapy
    • Hurley LH 2002 DNA and its associated processes as targets for cancer therapy. Nat. Rev. Cancer 2 188-200
    • (2002) Nat. Rev. Cancer , vol.2 , pp. 188-200
    • Hurley, L.H.1
  • 33
    • 39849084277 scopus 로고    scopus 로고
    • RNA targeting by small molecule alkaloids. Studies on the binding of berberine and palmatine to polyribonucelotides and comparison to ethidium
    • Islam MM and Suresh Kumar G 2008 RNA targeting by small molecule alkaloids. Studies on the binding of berberine and palmatine to polyribonucelotides and comparison to ethidium. J. Mol. Struct. 875 382-391.
    • (2008) J. Mol. Struct. , vol.875 , pp. 382-391
    • Islam, M.M.1    Suresh Kumar, G.2
  • 34
    • 67649499785 scopus 로고    scopus 로고
    • Small molecule-RNA interaction. Spectroscopic and calorimetric studies on the binding by the cytotoxic protoberberines alkaloid coralyne to single stranded polyribonucleotides
    • Islam MM and Suresh Kumar G 2009 Small molecule-RNA interaction. spectroscopic and calorimetric studies on the binding by the cytotoxic protoberberines alkaloid coralyne to single stranded polyribonucleotides. Biochim. Biophys. Acta 1790 829-839
    • (2009) Biochim. Biophys. Acta , vol.1790 , pp. 829-839
    • Islam, M.M.1    Suresh Kumar, G.2
  • 35
    • 33846450257 scopus 로고    scopus 로고
    • RNA binding small molecules: Studies on t-RNA binding by cytotoxic plant alkaloids berberine, palmatine and the comparison to ethidium
    • Islam MM, Sinha R and Suresh Kumar G 2007 RNA binding small molecules: studies on t-RNA binding by cytotoxic plant alkaloids berberine, palmatine and the comparison to ethidium. Biophys. Chem. 125 508-520
    • (2007) Biophys. Chem. , vol.125 , pp. 508-520
    • Islam, M.M.1    Sinha, R.2    Suresh Kumar, G.3
  • 36
    • 55549093088 scopus 로고    scopus 로고
    • Binding of DNA binding alkaloids berberine and palmatine to tRNA and comparison to ethidium: Spectroscopic and molecular modelling studies
    • Islam MM, Pandya P, Roy Chowdhuri SR, Kumar S and Suresh Kumar G 2008 Binding of DNA binding alkaloids berberine and palmatine to tRNA and comparison to ethidium: Spectroscopic and molecular modelling studies. J. Mol. Struct. 891 498-507
    • (2008) J. Mol. Struct. , vol.891 , pp. 498-507
    • Islam, M.M.1    Pandya, P.2    Roy Chowdhuri, S.R.3    Kumar, S.4    Suresh Kumar, G.5
  • 37
    • 60649106752 scopus 로고    scopus 로고
    • RNA targeting through binding of small molecules: Studies on tRNA binding by the cytotoxic protoberberines alkaloid coralyne
    • Islam MM, Pandya P, Roy Chowdhuri SR, Kumar S and Suresh Kumar G 2009a RNA targeting through binding of small molecules: studies on tRNA binding by the cytotoxic protoberberines alkaloid coralyne. Mol. BioSyst. 5 244-354
    • (2009) Mol. BioSyst. , vol.5 , pp. 244-354
    • Islam, M.M.1    Pandya, P.2    Roy Chowdhuri, S.R.3    Kumar, S.4    Suresh Kumar, G.5
  • 38
    • 61949239352 scopus 로고    scopus 로고
    • Spectroscopic and calorimetric studies on the binding of alkaloids berberine, palmatine and coralyne to double stranded RNA polynucleotides
    • Islam MM, Roy Chowdhury S and Suresh Kumar G 2009b Spectroscopic and calorimetric studies on the binding of alkaloids berberine, palmatine and coralyne to double stranded RNA polynucleotides. J. Phys. Chem. B 113 1210-1224
    • (2009) J. Phys. Chem. B , vol.113 , pp. 1210-1224
    • Islam, M.M.1    Roy Chowdhury, S.2    Suresh Kumar, G.3
  • 39
    • 79960162288 scopus 로고    scopus 로고
    • Binding of 9-O-(ω- amino) alkyl ether analogues of the plant alkaloid berberine to poly(A): Insights into self-structure induction
    • Islam, MM, Basu A and Suresh Kumar G 2011 Binding of 9-O-(ω- amino) alkyl ether analogues of the plant alkaloid berberine to poly(A): insights into self-structure induction. Med. Chem. Commun. 2 631-637
    • (2011) Med. Chem. Commun. , vol.2 , pp. 631-637
    • Islam, M.M.1    Basu, A.2    Suresh Kumar, G.3
  • 40
    • 0037129948 scopus 로고    scopus 로고
    • Thermodynamics of aminoglycosiderRNA recognition: The binding of neomycin-class aminoglycosides to the A site of 16 S rRNA
    • Kaul M and Pilch DS 2002 Thermodynamics of aminoglycosiderRNA recognition: The binding of neomycin-class aminoglycosides to the A site of 16 S rRNA. Biochemistry 41 7695-7706
    • (2002) Biochemistry , vol.41 , pp. 7695-7706
    • Kaul, M.1    Pilch, D.S.2
  • 43
    • 0029198606 scopus 로고
    • The binding of analogues of coralyne and related heterocycles to DNA triplexes
    • Latimer LJP, Payton N, Forsyth G and Lee JS 1995 The binding of analogues of coralyne and related heterocycles to DNA triplexes. Biochem. Cell Biol. 73 11-18
    • (1995) Biochem. Cell Biol. , vol.73 , pp. 11-18
    • Latimer, L.J.P.1    Payton, N.2    Forsyth, G.3    Lee, J.S.4
  • 44
    • 0027318084 scopus 로고
    • Coralyne binds to both T.A.T and C.G.C+triplexes
    • Lee JS, Latimer LJP and Hampel KJ 1993 Coralyne binds to both T.A.T and C.G.C+triplexes. Biochemistry 32 5591-5597
    • (1993) Biochemistry , vol.32 , pp. 5591-5597
    • Lee, J.S.1    Latimer, L.J.P.2    Hampel, K.J.3
  • 45
    • 85048645035 scopus 로고
    • Structural considerations in the interaction of DNA and acridines
    • Lerman LS 1961 Structural considerations in the interaction of DNA and acridines. J. Mol. Biol. 3 18-30
    • (1961) J. Mol. Biol. , vol.3 , pp. 18-30
    • Lerman, L.S.1
  • 46
    • 46749090394 scopus 로고    scopus 로고
    • Micro RNA: An emerging therapeutic target and intervention tool
    • Liu Z, Sall A and Yang D 2008 Micro RNA: an emerging therapeutic target and intervention tool. Int. J. Mol. Sci. 9 978-999
    • (2008) Int. J. Mol. Sci. , vol.9 , pp. 978-999
    • Liu, Z.1    Sall, A.2    Yang, D.3
  • 47
    • 34548024885 scopus 로고    scopus 로고
    • Molecular aspects on the interaction of protoberberines, benzophenanthridine, and aristolochia group of alkaloids with nucleic acid structure and biological perspectives
    • Maiti M and Suresh Kumar G 2007 Molecular aspects on the interaction of protoberberines, benzophenanthridine, and aristolochia group of alkaloids with nucleic acid structure and biological perspectives. Med. Res. Rev. 27 649-695
    • (2007) Med. Res. Rev. , vol.27 , pp. 649-695
    • Maiti, M.1    Suresh Kumar, G.2
  • 48
    • 77953589561 scopus 로고    scopus 로고
    • Biophysical aspects and biological implications of the interaction of benzophenanthridine alkaloids with DNA
    • Maiti M and Suresh Kumar G 2009 Biophysical aspects and biological implications of the interaction of benzophenanthridine alkaloids with DNA. Biophys. Rev. 1 119-129
    • (2009) Biophys. Rev. , vol.1 , pp. 119-129
    • Maiti, M.1    Suresh Kumar, G.2
  • 49
    • 81455123778 scopus 로고    scopus 로고
    • Polymorphic nucleic acid binding of bioactive isoquinolines alkaloids and their role in cancer
    • doi:10.4061/2010/593408
    • Maiti M and Suresh Kumar G 2010 Polymorphic nucleic acid binding of bioactive isoquinolines alkaloids and their role in cancer. J. Nucleic Acids 2010 doi:10.4061/2010/593408
    • (2010) J. Nucleic Acids 2010
    • Maiti, M.1    Suresh Kumar, G.2
  • 50
    • 11844291970 scopus 로고    scopus 로고
    • The search of DNAintercalators as antitumoral drugs: What it worked and what did not work
    • Martinez R and Chacon-Garcia L 2005 The search of DNAintercalators as antitumoral drugs: what it worked and what did not work. Curr. Med. Chem. 12 127-151
    • (2005) Curr. Med. Chem. , vol.12 , pp. 127-151
    • Martinez, R.1    Chacon-Garcia, L.2
  • 51
    • 0016175370 scopus 로고
    • Theoretical aspects of DNAprotein interactions: Co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice
    • McGhee JD and von Hippel PH 1974 Theoretical aspects of DNAprotein interactions: Co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice. J. Mol. Biol. 86 469-489
    • (1974) J. Mol. Biol. , vol.86 , pp. 469-489
    • McGhee, J.D.1    Von Hippel, P.H.2
  • 52
    • 4644223259 scopus 로고    scopus 로고
    • Mechanisms of gene silencing by double-stranded RNA
    • Meister G and Tusch T 2004 Mechanisms of gene silencing by double-stranded RNA. Nature 431 343-349
    • (2004) Nature , vol.431 , pp. 343-349
    • Meister, G.1    Tusch, T.2
  • 53
    • 0030786457 scopus 로고    scopus 로고
    • Coralyne has a preference for intercalation between TA.T triples in interamolecular DNA triple helices
    • Moraru-Allen AA, Cassidy S, Alvarez JLA, Fox KR, Brown T and Lane AN 1997 Coralyne has a preference for intercalation between TA.T triples in interamolecular DNA triple helices. Nucleic Acids Res. 25 1890-1896
    • (1997) Nucleic Acids Res. , vol.25 , pp. 1890-1896
    • Moraru-Allen, A.A.1    Cassidy, S.2    Alvarez, J.L.A.3    Fox, K.R.4    Brown, T.5    Lane, A.N.6
  • 54
    • 0025290484 scopus 로고
    • Interactions of berberine with poly(A) and tRNA
    • Nandi R, Debnath D and Maiti M 1990 Interactions of berberine with poly(A) and tRNA. Biochim. Biophys. Acta 1049 339-342
    • (1990) Biochim. Biophys. Acta , vol.1049 , pp. 339-342
    • Nandi, R.1    Debnath, D.2    Maiti, M.3
  • 55
    • 0034951136 scopus 로고    scopus 로고
    • DNA minor-groove recognition by small molecules
    • Neidle 2001 DNA minor-groove recognition by small molecules. Nat. Prod. Rep. 18 291-309
    • (2001) Nat. Prod. Rep. , vol.18 , pp. 291-309
    • Neidle1
  • 57
    • 0025733603 scopus 로고
    • Ribosomal RNA and translation
    • Noller HF 1991 Ribosomal RNA and translation. Annu. Rev. Biochem. 60 191-227
    • (1991) Annu. Rev. Biochem. , vol.60 , pp. 191-227
    • Noller, H.F.1
  • 58
    • 30544445342 scopus 로고    scopus 로고
    • Structural transitions in polyriboadenylic acid induced by the changes in pH and temperature: Vibrational circular dichroism study in solution and film states
    • Petrovic AG and Polavarapu PL 2005 Structural transitions in polyriboadenylic acid induced by the changes in pH and temperature: vibrational circular dichroism study in solution and film states. J. Phys. Chem. B 109 23698-23705
    • (2005) J. Phys. Chem. B , vol.109 , pp. 23698-23705
    • Petrovic, A.G.1    Polavarapu, P.L.2
  • 59
    • 0033545968 scopus 로고    scopus 로고
    • Spectroscopic studies on the interaction of aristololactam-β-D glucoside with DNA and RNA double and triple helices: A comparative study
    • Ray A, Suresh Kumar G, Das S and Maiti M 1999 Spectroscopic studies on the interaction of aristololactam-β-D glucoside with DNA and RNA double and triple helices: A comparative study. Biochemistry 38 6239-6247
    • (1999) Biochemistry , vol.38 , pp. 6239-6247
    • Ray, A.1    Suresh Kumar, G.2    Das, S.3    Maiti, M.4
  • 63
    • 77953594301 scopus 로고    scopus 로고
    • Binding of the anticancer alkaloid sanguinarine to double stranded RNAs: Insights into the structural and energetics aspects
    • Roy Chowdhuri S, Islam MM and Suresh Kumar G 2010 Binding of the anticancer alkaloid sanguinarine to double stranded RNAs: insights into the structural and energetics aspects. Mol. BioSyst. 6 1265-1276
    • (2010) Mol. BioSyst. , vol.6 , pp. 1265-1276
    • Roy Chowdhuri, S.1    Islam, M.M.2    Suresh Kumar, G.3
  • 64
    • 84969001783 scopus 로고
    • The attraction of proteins for small molecules and ions
    • Scatchard G 1949 The attraction of proteins for small molecules and ions. Ann. NY Acad. Sci. 51 660-672
    • (1949) Ann. NY Acad. Sci. , vol.51 , pp. 660-672
    • Scatchard, G.1
  • 65
    • 0043095581 scopus 로고    scopus 로고
    • Interaction of sanguinarine with double stranded RNA structures
    • Sen A and Maiti M 2002 Interaction of sanguinarine with double stranded RNA structures. Indian J. Biochem. Biophys. 39 106-112
    • (2002) Indian J. Biochem. Biophys. , vol.39 , pp. 106-112
    • Sen, A.1    Maiti, M.2
  • 66
    • 70349665346 scopus 로고    scopus 로고
    • Interaction of isoquinolines alkaloids with an RNA triplex: Structural and thermodynamic studies of berberine, palmatine, and coralyne binding to poly (U).poly(A)*poly(U)
    • Sinha R and Suresh Kumar G 2009 Interaction of isoquinolines alkaloids with an RNA triplex: structural and thermodynamic studies of berberine, palmatine, and coralyne binding to poly (U).poly(A)*poly(U). J. Phys. Chem. B 113 12410-13420
    • (2009) J. Phys. Chem. B , vol.113 , pp. 12410-13420
    • Sinha, R.1    Suresh Kumar, G.2
  • 67
    • 0034935020 scopus 로고    scopus 로고
    • Identification and functional characterization of neo-poly(A) polymerase, an RNA processing enzyme overexpressed in human tumors
    • Topalian SL, Kaneko S, Gonzales MI, Bond GL, Ward Y and Manley JL 2001 Identification and functional characterization of neo-poly(A) polymerase, an RNA processing enzyme overexpressed in human tumors. Mol. Cell Biol. 21 5614-5623
    • (2001) Mol. Cell Biol. , vol.21 , pp. 5614-5623
    • Topalian, S.L.1    Kaneko, S.2    Gonzales, M.I.3    Bond, G.L.4    Ward, Y.5    Manley, J.L.6
  • 68
    • 0036791206 scopus 로고    scopus 로고
    • Revelation of a cryptic major histocompatibility complex class II-restricted tumor epitope in a novel RNA processing enzyme
    • Topalian SL, Gonzales MI, Ward Y, Wang X and Wang RF 2002 Revelation of a cryptic major histocompatibility complex class II-restricted tumor epitope in a novel RNA processing enzyme. Cancer Res. 62 5505-5509
    • (2002) Cancer Res. , vol.62 , pp. 5505-5509
    • Topalian, S.L.1    Gonzales, M.I.2    Ward, Y.3    Wang, X.4    Wang, R.F.5
  • 69
    • 0033152070 scopus 로고    scopus 로고
    • RNA and the small molecule world
    • Tor Y 1999 RNA and the small molecule world. Angew. Chem. Int. Ed. 38 1579-1582
    • (1999) Angew. Chem. Int. Ed. , vol.38 , pp. 1579-1582
    • Tor, Y.1
  • 70
    • 0142106950 scopus 로고    scopus 로고
    • RNA as a drug target: The case of aminoglycosides
    • Vicens Q and Westhof E 2003 RNA as a drug target: the case of aminoglycosides. Chem. BioChem. 4 1018-1023
    • (2003) Chem. BioChem. , vol.4 , pp. 1018-1023
    • Vicens, Q.1    Westhof, E.2
  • 72
    • 0019364861 scopus 로고
    • DNA modification and cancer
    • Waring MJ 1981 DNA modification and cancer. Ann. Rev. Biochem. 50 159-192
    • (1981) Ann. Rev. Biochem. , vol.50 , pp. 159-192
    • Waring, M.J.1
  • 74
    • 0034045479 scopus 로고    scopus 로고
    • Targeting RNA with small molecules
    • Wilson, WD and Li K 2000 Targeting RNA with small molecules. Curr. Med. Chem. 7 73-98
    • (2000) Curr. Med. Chem. , vol.7 , pp. 73-98
    • Wilson, W.D.1    Li, K.2
  • 75
    • 36049040984 scopus 로고    scopus 로고
    • Molecular modes of action of cytotoxic alkaloids: From DNA intercalation, spindle poisoning, topoisomerase inhibition to apoptosis and multiple drug resistance
    • (ed) GA Cordell (New York: Elsevier Science)
    • Wink M 2007 Molecular modes of action of cytotoxic alkaloids: From DNA intercalation, spindle poisoning, topoisomerase inhibition to apoptosis and multiple drug resistance; in The Alkaloids: Chemistry and Biology vol 64 (ed) GA Cordell (New York: Elsevier Science) pp 1-47
    • (2007) The Alkaloids: Chemistry and Biology , vol.64 , pp. 1-47
    • Wink, M.1
  • 76
    • 24144502053 scopus 로고    scopus 로고
    • Molecular recognition of nucleic acids: Coralyne binds strongly to poly(A)
    • Xing F, Song G, Ren J, Chaires JB and Qu X 2005 Molecular recognition of nucleic acids: coralyne binds strongly to poly(A). FEBS Lett. 579 5035-5039
    • (2005) FEBS Lett. , vol.579 , pp. 5035-5039
    • Xing, F.1    Song, G.2    Ren, J.3    Chaires, J.B.4    Qu, X.5
  • 77
    • 9644265292 scopus 로고    scopus 로고
    • Berberine, a strong polyriboadenylic acid binding plant alkaloid: Spectroscopic, viscometric and thermodynamic study
    • Yadav RC, Suresh Kumar G, Bhadra K, Giri P, Sinha R, Pal S and Maiti M 2005 Berberine, a strong polyriboadenylic acid binding plant alkaloid: spectroscopic, viscometric and thermodynamic study. Bioorg. Med. Chem. 13 165-174
    • (2005) Bioorg. Med. Chem. , vol.13 , pp. 165-174
    • Yadav, R.C.1    Suresh Kumar, G.2    Bhadra, K.3    Giri, P.4    Sinha, R.5    Pal, S.6    Maiti, M.7
  • 78
    • 0022587259 scopus 로고
    • Non intercalating DNA-binding ligands: Specificity of the interaction and their use as tools in biophysical, biochemical and biological investigations of the genetic material
    • Zimmer C and Wahnet U 1986 Non intercalating DNA-binding ligands: specificity of the interaction and their use as tools in biophysical, biochemical and biological investigations of the genetic material. Prog. Biophys. Molec.Biol. 47 31-112
    • (1986) Prog. Biophys. Molec.Biol. , vol.47 , pp. 31-112
    • Zimmer, C.1    Wahnet, U.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.