-
2
-
-
0035793052
-
Identification of Id4 as a regulator of BRCA1 expression by using a ribozymelibrary- based inverse genomics approach
-
Beger C, Pierce LN, Kruger M, Marcusson EG, Robbins JM, Welcsh P, Welch PJ, Welte K, et al. 2001 Identification of Id4 as a regulator of BRCA1 expression by using a ribozymelibrary- based inverse genomics approach. Proc. Natl. Acad. Sci. USA 98 130-135
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 130-135
-
-
Beger, C.1
Pierce, L.N.2
Kruger, M.3
Marcusson, E.G.4
Robbins, J.M.5
Welcsh, P.6
Welch, P.J.7
Welte, K.8
-
3
-
-
0028675028
-
ADNA enzyme that cleaves RNA
-
Breaker RR and Joyce GF 1994 ADNA enzyme that cleaves RNA. Chem. Biol. 1 223-229
-
(1994)
Chem. Biol.
, vol.1
, pp. 223-229
-
-
Breaker, R.R.1
Joyce, G.F.2
-
4
-
-
2942705854
-
Target-site selection for the 10-23 DNAzyme
-
Cairns MJ and Sun LQ 2004 Target-site selection for the 10-23 DNAzyme. Methods Mol. Biol. 252 267-277
-
(2004)
Methods Mol. Biol.
, vol.252
, pp. 267-277
-
-
Cairns, M.J.1
Sun, L.Q.2
-
5
-
-
2442703829
-
Inhibition of EGFP expression by siRNA in EGFP-stably expressing Huh-7 cells
-
Cao M, Ren H, Pan X, Pan W and Qi ZT 2004 Inhibition of EGFP expression by siRNA in EGFP-stably expressing Huh-7 cells. J. Virol. Methods 119 189-194
-
(2004)
J. Virol. Methods
, vol.119
, pp. 189-194
-
-
Cao, M.1
Ren, H.2
Pan, X.3
Pan, W.4
Qi, Z.T.5
-
6
-
-
65349162752
-
DNAzymes and their therapeutic possibilities
-
Chan CW and Khachigian LM 2009 DNAzymes and their therapeutic possibilities. Intern. Med. J. 39 249-251
-
(2009)
Intern. Med. J.
, vol.39
, pp. 249-251
-
-
Chan, C.W.1
Khachigian, L.M.2
-
7
-
-
0141702348
-
Non-Watson Crick base pairs might stabilize RNA structural motifs in ribozymes - A comparative study of group-I intron structures
-
Chandrasekhar K and Malathhi R 2003 Non-Watson Crick base pairs might stabilize RNA structural motifs in ribozymes - a comparative study of group-I intron structures. J. Biosci. 28 547-555
-
(2003)
J. Biosci.
, vol.28
, pp. 547-555
-
-
Chandrasekhar, K.1
Malathhi, R.2
-
8
-
-
1942485996
-
Sequence-specific cleavage activities of DNA enzymes targeted against HIV-1 Gag and Nef regions
-
Dash BC and Banerjea AC 2004 Sequence-specific cleavage activities of DNA enzymes targeted against HIV-1 Gag and Nef regions. Oligonucleotides. 14 41-47
-
(2004)
Oligonucleotides.
, vol.14
, pp. 41-47
-
-
Dash, B.C.1
Banerjea, A.C.2
-
10
-
-
0032475985
-
Sequence specific cleavage of the HIV-1 coreceptor CCR5 gene by a hammer-head ribozyme and a DNA-enzyme: Inhibition of the coreceptor function by DNAenzyme
-
Goila R and Banerjea AC 1998 Sequence specific cleavage of the HIV-1 coreceptor CCR5 gene by a hammer-head ribozyme and a DNA-enzyme: inhibition of the coreceptor function by DNAenzyme. FEBS Lett. 436 233-238
-
(1998)
FEBS Lett.
, vol.436
, pp. 233-238
-
-
Goila, R.1
Banerjea, A.C.2
-
11
-
-
7944230575
-
Oligonucleotide therapeutics: 25 years agrowing
-
Goodchild J 2004 Oligonucleotide therapeutics: 25 years agrowing. Curr. Opin. Mol. Ther. 6 120-128
-
(2004)
Curr. Opin. Mol. Ther.
, vol.6
, pp. 120-128
-
-
Goodchild, J.1
-
12
-
-
0041420963
-
Design and development of integrase inhibitors as anti-HIV agents
-
Gupta SP and Nagappa AN 2003 Design and development of integrase inhibitors as anti-HIV agents. Curr. Med. Chem. 10 1779-1794
-
(2003)
Curr. Med. Chem.
, vol.10
, pp. 1779-1794
-
-
Gupta, S.P.1
Nagappa, A.N.2
-
13
-
-
33751247942
-
Inhibition of hepatitis B virus X gene expression by 10-23 DNAzymes
-
Hou W, Ni Q, Wo J, Li M, Liu K, Chen L, Hu Z, Liu R and Hu M 2006 Inhibition of hepatitis B virus X gene expression by 10-23 DNAzymes. Antiviral Res. 72 190-196
-
(2006)
Antiviral Res.
, vol.72
, pp. 190-196
-
-
Hou, W.1
Ni, Q.2
Wo, J.3
Li, M.4
Liu, K.5
Chen, L.6
Hu, Z.7
Liu, R.8
Hu, M.9
-
14
-
-
0034804143
-
RNA cleavage by the 10-23 DNA enzyme
-
Joyce GF 2001 RNA cleavage by the 10-23 DNA enzyme. Methods Enzymol. 341 503-517
-
(2001)
Methods Enzymol.
, vol.341
, pp. 503-517
-
-
Joyce, G.F.1
-
15
-
-
3042732096
-
Directed evolution of nucleic acid enzymes
-
Joyce GF 2004 Directed evolution of nucleic acid enzymes. Annu. Rev. Biochem. 73 791-836
-
(2004)
Annu. Rev. Biochem.
, vol.73
, pp. 791-836
-
-
Joyce, G.F.1
-
16
-
-
0036567147
-
Design of antisense oligonucleotides stabilized by locked nucleic acids
-
Kurreck J, Wyszko E, Gillen C and Erdmann VA 2002 Design of antisense oligonucleotides stabilized by locked nucleic acids. Nucleic Acids Res. 30 1911-1918
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 1911-1918
-
-
Kurreck, J.1
Wyszko, E.2
Gillen, C.3
Erdmann, V.A.4
-
17
-
-
22044447619
-
Effect of EBVLMP1 targeted DNAzymes on cell proliferation and apoptosis
-
Lu ZX, Ye M, Yan GR, Li Q, Tang M, Lee LM, Sun LQ and Cao Y 2005 Effect of EBVLMP1 targeted DNAzymes on cell proliferation and apoptosis. Cancer Gene Ther. 12 647-654
-
(2005)
Cancer Gene Ther.
, vol.12
, pp. 647-654
-
-
Lu, Z.X.1
Ye, M.2
Yan, G.R.3
Li, Q.4
Tang, M.5
Lee, L.M.6
Sun, L.Q.7
Cao, Y.8
-
18
-
-
0033591465
-
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
-
Mathews DH, Sabina J, Zuker M and Turner DH 1999 Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J. Mol. Biol. 288 911-940
-
(1999)
J. Mol. Biol.
, vol.288
, pp. 911-940
-
-
Mathews, D.H.1
Sabina, J.2
Zuker, M.3
Turner, D.H.4
-
19
-
-
2942642252
-
Inhibition of human breast carcinoma proliferation, migration, chemoinvasion and solid tumour growth by DNAzymes targeting the zinc finger transcription factor EGR-1
-
Mitchell A, Dass CR, Sun LQ and Khachigian LM 2004 Inhibition of human breast carcinoma proliferation, migration, chemoinvasion and solid tumour growth by DNAzymes targeting the zinc finger transcription factor EGR-1. Nucleic Acids Res. 32 3065-3069
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 3065-3069
-
-
Mitchell, A.1
Dass, C.R.2
Sun, L.Q.3
Khachigian, L.M.4
-
20
-
-
0037446068
-
Small interfering RNAs suppress the expression of endogenous and GFP-fused epidermal growth factor receptor (erbB1) and induce apoptosis in erbB1-overexpressing cells
-
Nagy P, Arndt-Jovin DJ and Jovin TM 2003 Small interfering RNAs suppress the expression of endogenous and GFP-fused epidermal growth factor receptor (erbB1) and induce apoptosis in erbB1-overexpressing cells. Exp. Cell Res. 285 39-49
-
(2003)
Exp. Cell Res.
, vol.285
, pp. 39-49
-
-
Nagy, P.1
Arndt-Jovin, D.J.2
Jovin, T.M.3
-
21
-
-
0032527839
-
Effects of helical structures formed by the binding arms of DNAzymes and their substrates on catalytic activity
-
Ota N, Warashina M, Hirano K, Hatanaka K and Taira K 1998 Effects of helical structures formed by the binding arms of DNAzymes and their substrates on catalytic activity. Nucleic Acids Res. 26 3385-3391
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 3385-3391
-
-
Ota, N.1
Warashina, M.2
Hirano, K.3
Hatanaka, K.4
Taira, K.5
-
22
-
-
0034708165
-
In situ demonstration of inhibitory effects of hammerhead ribozymes that are targeted to the hepatitis Bx sequence in cultured cells
-
Passman M, Weinberg M, Kew M and Arbuthnot P 2000 In situ demonstration of inhibitory effects of hammerhead ribozymes that are targeted to the hepatitis Bx sequence in cultured cells. Biochem. Biophys. Res. Commun. 268 728-733
-
(2000)
Biochem. Biophys. Res. Commun.
, vol.268
, pp. 728-733
-
-
Passman, M.1
Weinberg, M.2
Kew, M.3
Arbuthnot, P.4
-
23
-
-
1642458402
-
Prospects for antiviral ribozymes and deoxyribozymes
-
Peracchi A 2004 Prospects for antiviral ribozymes and deoxyribozymes. Rev. Med. Virol. 14 47-64
-
(2004)
Rev. Med. Virol.
, vol.14
, pp. 47-64
-
-
Peracchi, A.1
-
24
-
-
14344264784
-
Silencing of SARS-CoV spike gene by small interfering RNA in HEK 293 T cells
-
Qin ZL, Zhao P, Zhang XL, Yu JG, Cao MM, Zhao LJ, Luan J and Qi ZT 2004 Silencing of SARS-CoV spike gene by small interfering RNA in HEK 293 T cells. Biochem. Biophys. Res. Commun. 324 1186-1193
-
(2004)
Biochem. Biophys. Res. Commun.
, vol.324
, pp. 1186-1193
-
-
Qin, Z.L.1
Zhao, P.2
Zhang, X.L.3
Yu, J.G.4
Cao, M.M.5
Zhao, L.J.6
Luan, J.7
Qi, Z.T.8
-
25
-
-
33744524010
-
Beyond Mfold: Recent advances in RNA bioinformatics
-
Reeder J, Hochsmann M, Rehmsmeier M, Voss B and Giegerich R 2006 Beyond Mfold: recent advances in RNA bioinformatics. J. Biotechnol. 124 41-55
-
(2006)
J. Biotechnol.
, vol.124
, pp. 41-55
-
-
Reeder, J.1
Hochsmann, M.2
Rehmsmeier, M.3
Voss, B.4
Giegerich, R.5
-
26
-
-
48849097757
-
Sequence-specific cleavage of hepatitis C virus RNA by DNAzymes: Inhibition of viral RNA translation and replication
-
Roy S, Gupta N, Subramanian N, Mondal T, Banerjea AC and Das S 2008 Sequence-specific cleavage of hepatitis C virus RNA by DNAzymes: inhibition of viral RNA translation and replication. J. Gen. Virol. 89 1579-1586
-
(2008)
J. Gen. Virol.
, vol.89
, pp. 1579-1586
-
-
Roy, S.1
Gupta, N.2
Subramanian, N.3
Mondal, T.4
Banerjea, A.C.5
Das, S.6
-
28
-
-
58149157923
-
Preventive strategies for frequent outbreaks of Japanese encephalitis in Northern India
-
Saxena V and Dhole TN 2008 Preventive strategies for frequent outbreaks of Japanese encephalitis in Northern India. J. Biosci. 33 505-514
-
(2008)
J. Biosci.
, vol.33
, pp. 505-514
-
-
Saxena, V.1
Dhole, T.N.2
-
29
-
-
10044261960
-
Ribozyme- and deoxyribozyme-strategies for medical applications
-
Schubert S and Kurreck J 2004 Ribozyme- and deoxyribozyme-strategies for medical applications. Curr. Drug Targets 5 667-681
-
(2004)
Curr. Drug Targets
, vol.5
, pp. 667-681
-
-
Schubert, S.1
Kurreck, J.2
-
30
-
-
1142281948
-
Breaking up is easy to do (if you're a DNA enzyme that cleaves RNA)
-
Silverman SK 2004 Breaking up is easy to do (if you're a DNA enzyme that cleaves RNA). Chem. Biol. 11 7-8
-
(2004)
Chem. Biol.
, vol.11
, pp. 7-8
-
-
Silverman, S.K.1
-
31
-
-
28544448500
-
In vitro selection, characterization, and application of deoxyribozymes that cleave RNA
-
Silverman SK 2005 In vitro selection, characterization, and application of deoxyribozymes that cleave RNA. Nucleic Acids Res. 33 6151-6163
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 6151-6163
-
-
Silverman, S.K.1
-
32
-
-
0034954516
-
Novel mono- and di-DNAenzymes targeted to cleave TAT or TAT-REVRNA inhibit HIV-1 gene expression
-
Unwalla H and Banerjea AC 2001 Novel mono- and di-DNAenzymes targeted to cleave TAT or TAT-REVRNA inhibit HIV-1 gene expression. Antiviral Res. 51 127-139
-
(2001)
Antiviral Res.
, vol.51
, pp. 127-139
-
-
Unwalla, H.1
Banerjea, A.C.2
-
33
-
-
33748317801
-
Potent inhibition of HIV-1 gene expression and TAT-mediated apoptosis in human T cells by novel mono- and multitarget anti- TAT/Rev/Env ribozymes and a general purpose RNA-cleaving DNA-enzyme
-
Unwalla H, Chakraborti S, Sood V, Gupta N and Banerjea AC 2006 Potent inhibition of HIV-1 gene expression and TAT-mediated apoptosis in human T cells by novel mono- and multitarget anti- TAT/Rev/Env ribozymes and a general purpose RNA-cleaving DNA-enzyme. Antiviral Res. 72 134-144
-
(2006)
Antiviral Res.
, vol.72
, pp. 134-144
-
-
Unwalla, H.1
Chakraborti, S.2
Sood, V.3
Gupta, N.4
Banerjea, A.C.5
-
34
-
-
80052309885
-
Ezrin mRNA target site selection for DNAzymes using secondary structure and hybridization thermodynamics
-
Wang Y, Shen J, Shang X, Wang J, Li J, Yin J and Zou C 2011 Ezrin mRNA target site selection for DNAzymes using secondary structure and hybridization thermodynamics. Tumour Biol. 32 809-817
-
(2011)
Tumour Biol.
, vol.32
, pp. 809-817
-
-
Wang, Y.1
Shen, J.2
Shang, X.3
Wang, J.4
Li, J.5
Yin, J.6
Zou, C.7
-
35
-
-
0033117651
-
Extremely high and specific activity of DNA enzymes in cells with a Philadelphia chromosome
-
Warashina M, Kuwabara T, Nakamatsu Y and Taira K 1999 Extremely high and specific activity of DNA enzymes in cells with a Philadelphia chromosome. Chem. Biol. 6 237-250
-
(1999)
Chem. Biol.
, vol.6
, pp. 237-250
-
-
Warashina, M.1
Kuwabara, T.2
Nakamatsu, Y.3
Taira, K.4
-
36
-
-
0033589752
-
Inhibition of bcr-abl oncogene expression by novel deoxyribozymes (DNAzymes)
-
Wu Y, Yu L, McMahon R, Rossi JJ, Forman SJ and Snyder DS 1999 Inhibition of bcr-abl oncogene expression by novel deoxyribozymes (DNAzymes). Hum. Gene Ther. 10 2847-2857
-
(1999)
Hum. Gene Ther.
, vol.10
, pp. 2847-2857
-
-
Wu, Y.1
Yu, L.2
McMahon, R.3
Rossi, J.J.4
Forman, S.J.5
Snyder, D.S.6
-
37
-
-
33745433006
-
Inhibition of respiratory syncytial virus in cultured cells by nucleocapsid gene targeted deoxyribozyme (DNAzyme)
-
Xie YY, Zhao XD, Jiang LP, Liu HL, Wang LJ, Fang P, Shen KL, Xie ZD, Wu YP and Yang XQ 2006 Inhibition of respiratory syncytial virus in cultured cells by nucleocapsid gene targeted deoxyribozyme (DNAzyme). Antiviral Res. 71 31-41
-
(2006)
Antiviral Res.
, vol.71
, pp. 31-41
-
-
Xie, Y.Y.1
Zhao, X.D.2
Jiang, L.P.3
Liu, H.L.4
Wang, L.J.5
Fang, P.6
Shen, K.L.7
Xie, Z.D.8
Wu, Y.P.9
Yang, X.Q.10
-
38
-
-
11844276654
-
Deletion analysis in the catalytic region of the 10-23 DNA enzyme
-
Zaborowska Z, Schubert S, Kurreck J and Erdmann VA 2005 Deletion analysis in the catalytic region of the 10-23 DNA enzyme. FEBS Lett. 579 554-558
-
(2005)
FEBS Lett.
, vol.579
, pp. 554-558
-
-
Zaborowska, Z.1
Schubert, S.2
Kurreck, J.3
Erdmann, V.A.4
-
39
-
-
0032821352
-
Inhibition of infection of incoming HIV-1 virus by RNA-cleaving DNA enzyme
-
Zhang X, Xu Y, Ling H and Hattori T 1999 Inhibition of infection of incoming HIV-1 virus by RNA-cleaving DNA enzyme. FEBS Lett. 458 151-156
-
(1999)
FEBS Lett.
, vol.458
, pp. 151-156
-
-
Zhang, X.1
Xu, Y.2
Ling, H.3
Hattori, T.4
-
40
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M 2003 Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31 3406-3415
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
-
41
-
-
0019876473
-
Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information
-
Zuker M and Stiegler P 1981 Optimal computer folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res. 9 133-148
-
(1981)
Nucleic Acids Res.
, vol.9
, pp. 133-148
-
-
Zuker, M.1
Stiegler, P.2
|