Exploring three-dimensional matrix-assisted laser desorption/ionization imaging mass spectrometry data: Three-dimensional spatial segmentation of mouse kidney

Analytical Chemistry

Volumn 84, Issue 14, 2012, Pages 6079-6087

  Trede, Dennis ^a,b   Schiffler, Stefan ^a,b   Becker, Michael ^c   Wirtz, Stefan ^d   Steinhorst, Klaus ^a   Strehlow, Jan ^d   Aichler, Michaela ^e   Kobarg, Jan Hendrik ^b   Oetjen, Janina ^b   Dyatlov, Andrey ^a,b   Heldmann, Stefan ^d   Walch, Axel ^e   Thiele, Herbert ^a,b,d   Maass, Peter ^a,b   Alexandrov, Theodore ^a,b  

^a Steinbeis Innovation Center for Scientific Computing in Life Sciences   (Germany)

^b UNIVERSITY OF BREMEN   (Germany)

^c BRUKER DALTONIK GMBH   (Germany)

^d FRAUNHOFER MEVIS   (Germany)

^e INSTITUTE OF EPIDEMIOLOGY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

3-D IMAGE DENOISING; 3D DATA; ANATOMICAL REGIONS; ANATOMICAL STRUCTURES; AUTOMATED ANALYSIS; BIOANALYTICAL TECHNIQUES; CLUSTERING METHODS; DATA SETS; EDGE PRESERVING; HIER-ARCHICAL CLUSTERING; HIGH SPATIAL RESOLUTION; IMAGING MASS SPECTROMETRY; IN-LINE; K-MEANS; LABEL FREE; LIFE-SCIENCES; MASS SPECTRA; MASS SPECTROMETRY DATA; MATRIX ASSISTED LASER DESORPTION/IONIZATION; MOLECULAR COMPOUNDS; MOUSE KIDNEY; PARAFFIN EMBEDDING; PATHOLOGICAL CASE; SAMPLE PREPARATION; SERIAL SECTION; SIGNIFICANT IMPACTS; SPATIAL POINTS; SPATIAL SEGMENTATION; SPECTRA PREPROCESSING; STANDARD PROTOCOLS; THREE DIMENSIONAL (3-D) IMAGING; TISSUE FIXATION;

COMPUTATIONAL METHODS; COMPUTERIZED TOMOGRAPHY; MAMMALS; MASS SPECTROMETERS; NETWORK PROTOCOLS; PARAFFINS; PIPELINES; SECONDARY ION MASS SPECTROMETRY; TISSUE;

THREE DIMENSIONAL;

ANALYSIS; ANIMAL; ARTICLE; KIDNEY; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; MOLECULAR IMAGING; MOUSE; THREE DIMENSIONAL IMAGING;

ANALYTIC SAMPLE PREPARATION METHODS; ANIMALS; IMAGING, THREE-DIMENSIONAL; KIDNEY; MICE; MOLECULAR IMAGING; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 84863954470     PISSN: 00032700     EISSN: 15206882     Source Type: Journal    
DOI: 10.1021/ac300673y     Document Type: Article

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