Polyphasic characterisation of three new Phyllosticta spp

Persoonia: Molecular Phylogeny and Evolution of Fungi

Volumn 28, Issue , 2012, Pages 76-84

  Su, Y Y ^a   Cai, L ^a  

^a INSTITUTE OF MICROBIOLOGY   (China)

Author keywords

Molecular; Morphology; Phylogeny; Systematic; Taxonomy

Indexed keywords

HOSTA; HOSTA PLANTAGINEA; ILEX; ILEX AQUIFOLIUM; PHYLLOSTICTA; SCHIMA SUPERBA;

EID: 84863950421     PISSN: 00315850     EISSN: None     Source Type: Journal    
DOI: 10.3767/003158512X645334     Document Type: Article

References (45)

1. Aa HA van der. 1973. Studies in Phyllosticta I. Studies in Mycology 5: 1-110.
2. Aa HA van der, Vanev S. 2002. A revision of the species described in Phyllosticta. Centraalbureau voor Schimmelcultures, Utrecht, The Netherlands.
3. Arzanlou M, Groenewald JZ, Fullerton RA, Abeln ECA, Carlier J, Zapater MF, et al. 2008. Multiple gene genealogies and phenotypic characters dif-ferentiate several novel species of Mycosphaerella and related anamorphs on banana. Persoonia 20: 19-37.
4. Baayen RP, Bonants PJM, Verkley G, Carroll GC, Aa HA van der, et al. 2002. Nonpathogenic isolates of the Citrus Black Spot fungus, Guignardia citricarpa, identified as a cosmopolitan endophyte of woody plants, G. mangiferae (Phyllosticta capitalensis). Phytopathology 92: 464-477.
5. Baldassari RB, Wickart E, Goes A de. 2008. Pathogenicity, colony morphology and diversity of isolates of Guignardia citricarpa and G. mangiferae isolated from Citrus spp. European Journal of Plant Pathology 120: 103-110.
6. Bertault R. 1982. Contribution a la flore mycologique de la Catalogne. Acta Botanica Barcinonensia 34: 5-35.
7. Bissett J. 1979. Coelomycetes on Liliales: the genus Phyllosticta. Canadian Journal of Botany 57: 2082-2095.
8. Bissett J. 1986. Discochora yuccae sp. nov. with Phyllosticta and Lepto-dothiorella synanamorphs. Canadian Journal of Botany 64: 1720-1726.
9. Cai L, Hyde KD, Taylor PWJ, Weir B, Waller J, et al. 2009. A polyphasic ap-proach for studying Colletotrichum. Fungal Diversity 39: 183-204.
10. Carbone I, Kohn LM. 1999. A method for designing primer sets for speciation studies in filamentous ascomycetes. Mycologia 91: 553-556.
11. Cho WD, Shin HD (eds). 2004. List of plant diseases in Korea. Fourth edition. Korean Society of Plant Pathology.
12. Choi YW, Hyde KD, Ho WH. 1999. Single spore isolation of fungi. Fungal Diversity 3: 29-38.
13. Crous PW, Gams W, Stalpers JA, Robert V, Stegehuis G. 2004. MycoBank: an online initiative to launch mycology into the 21st century. Studies in Mycology 50: 19-22.
14. Crous PW, Slippers B, Wingfield MJ, Reeder J, Marasas WFO, et al. 2006. Phylogenetic lineages in the Botryosphaeriaceae. Studies in Mycology 55: 235-253.
15. Glienke C, Pereira OL, Stringari D, Fabris J, Kava-Cordeiro V, et al. 2011. Endophytic and pathogenic Phyllosticta species, with reference to those associated with Citrus Black Spot. Persoonia 26: 47-56.
16. Glienke-Blanco C, Aguilar-Vildoso CI, Vieira MLC, Barroso PAV, Azevedo JL. 2002. Genetic variability in the endophytic fungus Guignardia citricarpa isolated from citrus plants. Genetics and Molecular Biology 25: 251-255.
17. Guerber JC, Liu B, Correll JC, Johnston PR. 2003. Characterization of diversity in Colletotrichum acutatum sensu lato by sequence analysis of two gene introns, mtDNA and intron RFLPs, and mating compatibility. Mycologia 95: 872-895.
18. Hall TA. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symposium Series 41: 95-98.
19. Hawksworth DL, Crous PW, Redhead SA, Reynolds DR, Samson RA, et al. 2011. The Amsterdam Declaration on Fungal Nomenclature. IMA Fungus 2: 105-112.
20. Huelsenbeck JP, Ronquist FR. 2001. MrBayes: Bayesian inference of phylogenetic trees. Biometrics 17: 754-755.
21. Hyde KD, Abd-Elsalam K, Cai L. 2010. Morphology: still essential in a molecular world. Mycotaxon 114: 439-451.
22. Jin J. 2011. Conidial morphology changes in four Phyllosticta species. Mycotaxon 115: 401-406.
23. Kobayashi T. 2007. Index of fungi inhabiting woody plants in Japan. Host, distribution and literature. Zenkoku-Noson-KyoikuKyokai Publishing Co., Ltd.
24. Motohashi K, Araki I, Nakashima C. 2008. Four new species of Phyllosticta, one new species of Pseudocercospora, and one new combination in Passalora from Japan. Mycoscience 49: 138-146.
25. Motohashi K, Inaba S, Anzai K, Takamatsu S, Nakashima C. 2009. Phy-logenetic analyses of Japanese species of Phyllosticta sensu stricto. Mycoscience 50: 291-302.
26. Myllys L, Stenroos S, Thell A. 2002. New genes for phylogenetic studies of lichenized fungi: glyceraldehyde-3-phosphate dehydrogenase and beta-tubulin genes. Lichenologist 34: 237-246.
27. Nylander JAA. 2004. MrModeltest v. 2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
28. Okane I, Lumyong S, Nakagiri A, Ito T. 2003. Extensive host range of an endophytic fungus, Guignardia endophyllicola (anamorph: Phyllosticta capitalensis). Mycoscience 44: 353-363.
29. Page RDM. 1996. TreeView: An application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences 12: 357-358.
30. Persoon CH. 1818. Traité sur les Champignons Comestibles, Contenantl' Indication des Espèces Nuisibles Précédéd'une Introduction à l'Histoire des Champignons. Paris, Belin-Leprieur.
31. Rannala B, Yang Z. 1996. Probability distribution of molecular evolution-ary trees: a new method of phylogenetic inference. Journal of Molecular Evolution 43: 304-311.
32. Rayner RW. 1970. A mycological colour chart. Common wealth Mycological Institute. Kew, Surrey, UK.
33. Shimodaira H, Hasegawa M. 1999. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Molecular Biology and Evolution 16: 1114-1116.
34. Swofford DL. 2003. PAUP*. Phylogenetic Analysis Using Parsimony (*and other methods). Version 4. Sinauer Associates, Sunderland, Massachu-setts, USA.
35. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24: 4876-4882.
36. Viala P, Ravaz L. 1892. Sur la dénomination botanique (Guignardia bidwellii) du black-rot. Bulletin de la Société Mycologique de France 8: 63.
37. Wang XH, Chen GQ, Huang F, Zhang JZ, Hyde KD, Li HY. 2012. Phyllosticta species associated with citrus diseases in China. Fungal Diversity 52: 209-224.
38. White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds), PCR Protocols: A guide to methods and applications: 315-322. Academic Press, San Diego, USA.
39. Wikee S, Udayanga D, Crous PW, Chukeatirote K, McKenzie EHC, et al. 2011. Phyllosticta-an overview of current status of species recognition. Fungal Diversity 51: 43-61.
40. Wingfield MJ, Beer ZW de, Slippers B, Wingfield BD, Groenewald JZ, et al. 2012. One fungus, one name promotes progressive plant pathology. Molecular Plant Pathology doi: 10.1111/J.1364-3703.2011.00768.X.
41. Wulandari NF, To-anun C, Hyde KD, Duong LM, Gruyter J de, et al. 2009. Phyllosticta citriasiana sp. nov., the cause of Citrus tan spot of Citrus maxima in Asia. Fungal Diversity 34: 23-39.
42. Yip HY. 1989. New species of Phyllosticta. Mycological Research 93: 489-496.
43. Zhang TY. 1999. Taxonomic studies of Alternaria from China VIII. New spe-cies and new records on Gramineae, Iridiaceae, and Liliaceae. Mycotaxon 72: 443-453.
44. Zhang TY. 2006. Flora Fungorum Sinicorum. Vol. 26. Botrytis, Ramularia. Science Press, Beijing.
45. Zhaxybayeva O, Gogarten JP. 2002. Bootstrap, Bayesian probability and maximum likelihood mapping: exploringg new tools for comparative genome analyses. Genomics 3: 1-15.