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Volumn 34, Issue 3, 2002, Pages 237-246

New genes for phylogenetic studies of lichenized fungi: Glyceraldehyde-3-phosphate dehydrogenase and beta-tubulin genes

Author keywords

Beta tubulin gene; Glyceraldehyde 3 phosphate dehydrogenase gene; Lichens; Phylogenetic analysis

Indexed keywords

ASCOMYCOTA; CLADONIA; CLADONIA ARBUSCULA; CLADONIA RANGIFERINA; FUNGI; LECANORALES;

EID: 0242508906     PISSN: 00242829     EISSN: None     Source Type: Journal    
DOI: 10.1006/lich.2002.0390     Document Type: Article
Times cited : (75)

References (35)
  • 2
    • 0030829547 scopus 로고    scopus 로고
    • Disparate sequence characteristics of the Erysiphe graminis f. sp. hordei glyceraldehyde-3-phosphate dehydrogenase gene
    • Christiansen, S. K., Justesen, A. F. & Giese, H. (1997) Disparate sequence characteristics of the Erysiphe graminis f. sp. hordei glyceraldehyde-3-phosphate dehydrogenase gene. Current Genetics 31: 525-529.
    • (1997) Current Genetics , vol.31 , pp. 525-529
    • Christiansen, S.K.1    Justesen, A.F.2    Giese, H.3
  • 3
    • 0000989175 scopus 로고
    • Gene trees and species trees: Molecular systematics as one-character taxonomy
    • Doyle, J. J. (1992) Gene trees and species trees: molecular systematics as one-character taxonomy. Systematic Botany 17: 144-163.
    • (1992) Systematic Botany , vol.17 , pp. 144-163
    • Doyle, J.J.1
  • 5
    • 0002914687 scopus 로고    scopus 로고
    • Families and higher taxa of Ascomycota
    • Eriksson, O. E. & Winka, K. (1998) Families and higher taxa of Ascomycota. Myconet 1: 17-24.
    • (1998) Myconet , vol.1 , pp. 17-24
    • Eriksson, O.E.1    Winka, K.2
  • 6
    • 0242677403 scopus 로고    scopus 로고
    • Computer program and documentation distributed by the author
    • Farris, J. S. (1997) Xarn. Computer program and documentation distributed by the author.
    • (1997) Xarn
    • Farris, J.S.1
  • 8
    • 0032949947 scopus 로고    scopus 로고
    • Glyceraldehyde-3-phosphate dehydrogenase gene diversity in eubacteria and eukaryotes: Evidence for intra- and inter-kingdom gene transfer
    • Figge, R. M., Schubert, M., Brinkmann, H. & Cerff, R. (1999) Glyceraldehyde-3-phosphate dehydrogenase gene diversity in eubacteria and eukaryotes: evidence for intra- and inter-kingdom gene transfer. Molecular Biology and Evolution 16: 429-440.
    • (1999) Molecular Biology and Evolution , vol.16 , pp. 429-440
    • Figge, R.M.1    Schubert, M.2    Brinkmann, H.3    Cerff, R.4
  • 9
    • 0001485434 scopus 로고
    • Polymerase chain reaction (PCR) primers for amplifying and sequencing nuclear 18S rDNA from lichenized fungi
    • Gargas, A. & Taylor, J. W. (1992) Polymerase chain reaction (PCR) primers for amplifying and sequencing nuclear 18S rDNA from lichenized fungi. Mycologia 84: 589-592.
    • (1992) Mycologia , vol.84 , pp. 589-592
    • Gargas, A.1    Taylor, J.W.2
  • 10
    • 0030451574 scopus 로고    scopus 로고
    • A nomenclature for fungal PCR primers with examples from introncontaining SSU rDNA
    • Gargas, A. & DePriest, P. T. (1996) A nomenclature for fungal PCR primers with examples from introncontaining SSU rDNA. Mycologia 88: 745-748.
    • (1996) Mycologia , vol.88 , pp. 745-748
    • Gargas, A.1    Depriest, P.T.2
  • 11
    • 0031940433 scopus 로고    scopus 로고
    • Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus
    • Geiser, D. M., Pitt, J. I. & Taylor, J. W. (1998a) Cryptic speciation and recombination in the aflatoxin-producing fungus Aspergillus flavus. Proceedings of National Academy of Sciences USA 95: 388-393.
    • (1998) Proceedings of National Academy of Sciences USA , vol.95 , pp. 388-393
    • Geiser, D.M.1    Pitt, J.I.2    Taylor, J.W.3
  • 12
    • 0031741483 scopus 로고    scopus 로고
    • Evolutionary relationships in Aspergillus section Fumigati inferred from partial β-tubulin and hydrophobin DNA sequences
    • Geiser, D. M., Frisvad, J. C. & Taylor, J. W. (1998b) Evolutionary relationships in Aspergillus section Fumigati inferred from partial β-tubulin and hydrophobin DNA sequences. Mycologia 90: 831-845.
    • (1998) Mycologia , vol.90 , pp. 831-845
    • Geiser, D.M.1    Frisvad, J.C.2    Taylor, J.W.3
  • 13
    • 0034463293 scopus 로고    scopus 로고
    • The phylogenetics of mycotoxin and sclerotium production in Aspergillus flavus and Aspergillus oryzae
    • doi:10.1006/fgbi.2000.1215
    • Geiser, D. M., Dorner, J. W., Horn, B. W. & Taylor, J. W. (2000) The phylogenetics of mycotoxin and sclerotium production in Aspergillus flavus and Aspergillus oryzae. Fungal Genetics and Biology 31: 169-179. doi:10.1006/fgbi.2000.1215.
    • (2000) Fungal Genetics and Biology , vol.31 , pp. 169-179
    • Geiser, D.M.1    Dorner, J.W.2    Horn, B.W.3    Taylor, J.W.4
  • 14
    • 0028969372 scopus 로고
    • Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes
    • Glass, N. L. & Donaldson, G. C. (1995) Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous ascomycetes. Applied and Environmental Microbiology 61: 1323-1330.
    • (1995) Applied and Environmental Microbiology , vol.61 , pp. 1323-1330
    • Glass, N.L.1    Donaldson, G.C.2
  • 15
    • 0029908930 scopus 로고    scopus 로고
    • Alpha-tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family
    • Keeling, P. J. & Doolittle, W. F. (1996) Alpha-tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family. Molecular Biology and Evolution 13: 1297-1305.
    • (1996) Molecular Biology and Evolution , vol.13 , pp. 1297-1305
    • Keeling, P.J.1    Doolittle, W.F.2
  • 16
    • 0035731840 scopus 로고    scopus 로고
    • A gene genealogical approach to recognize phylogenetic species boundaries in the lichenized fungus Letharia
    • Kroken, S. & Taylor, J. W. (2001) A gene genealogical approach to recognize phylogenetic species boundaries in the lichenized fungus Letharia. Mycologia 93: 38-53.
    • (2001) Mycologia , vol.93 , pp. 38-53
    • Kroken, S.1    Taylor, J.W.2
  • 17
    • 0032407388 scopus 로고    scopus 로고
    • Support, ribosomal sequences and the phylogeny of the eukaryotes
    • Libscomb, D., Farris, J. S., Källersjö, M. & Tehler, A. (1998) Support, ribosomal sequences and the phylogeny of the eukaryotes. Cladistics 14: 303-338.
    • (1998) Cladistics , vol.14 , pp. 303-338
    • Libscomb, D.1    Farris, J.S.2    Källersjö, M.3    Tehler, A.4
  • 18
    • 0028104136 scopus 로고
    • Nucleotide sequence variation of chitin synthase genes among ectomycorrhizal fungi and its potential use in taxonomy
    • Mehmann, B., Brunner, I. & Braus, G. H. (1994) Nucleotide sequence variation of chitin synthase genes among ectomycorrhizal fungi and its potential use in taxonomy. Applied and Environmental Microbiology 60: 3105-3111.
    • (1994) Applied and Environmental Microbiology , vol.60 , pp. 3105-3111
    • Mehmann, B.1    Brunner, I.2    Braus, G.H.3
  • 19
    • 0000147290 scopus 로고
    • The implications of congruence in Menidia
    • Mickevich, M. F. & Farris, J. S. (1981) The implications of congruence in Menidia. Systematic Zoology 30: 351-369.
    • (1981) Systematic Zoology , vol.30 , pp. 351-369
    • Mickevich, M.F.1    Farris, J.S.2
  • 20
    • 0035280782 scopus 로고    scopus 로고
    • β-tubulin, ITS and group I intron sequences challenge the species pair concept in Physcia aipolia and P. caesia
    • Myllys, L., Lohtander, K. & Tehler, A. (2001) β-tubulin, ITS and group I intron sequences challenge the species pair concept in Physcia aipolia and P. caesia. Mycologia 93: 335-343.
    • (2001) Mycologia , vol.93 , pp. 335-343
    • Myllys, L.1    Lohtander, K.2    Tehler, A.3
  • 21
    • 0042592785 scopus 로고    scopus 로고
    • On simultaneous analysis
    • Nixon, K. C. & Carpenter, J. M. (1996) On simultaneous analysis. Cladistics 12: 221-241.
    • (1996) Cladistics , vol.12 , pp. 221-241
    • Nixon, K.C.1    Carpenter, J.M.2
  • 22
    • 0031065526 scopus 로고    scopus 로고
    • Two divergent intragenomic rDNa ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous
    • O'Donnell, K. & Cigelnik, E. (1997) Two divergent intragenomic rDNA ITS2 types within a monophyletic lineage of the fungus Fusarium are nonorthologous. Molecular Phylogenetics and Evolution 7: 103-116.
    • (1997) Molecular Phylogenetics and Evolution , vol.7 , pp. 103-116
    • O'Donnell, K.1    Cigelnik, E.2
  • 23
    • 0031778848 scopus 로고    scopus 로고
    • Molecular systematics and phylogeography of the Gibberella fujikuroi species complex
    • O'Donnell, K., Cigelnik, E. & Nirenberg, H. I. (1998) Molecular systematics and phylogeography of the Gibberella fujikuroi species complex. Mycologia 90: 465-493.
    • (1998) Mycologia , vol.90 , pp. 465-493
    • O'Donnell, K.1    Cigelnik, E.2    Nirenberg, H.I.3
  • 24
    • 0001099225 scopus 로고    scopus 로고
    • Evolutionary relationships of nonsexual lichenized fungi: Molecular phylogenetic hypotheses for the genera Siphula and Thamnolia from SSU and LSU rDNA
    • Platt, J. L. & Spatafora, J. W. (2000) Evolutionary relationships of nonsexual lichenized fungi: molecular phylogenetic hypotheses for the genera Siphula and Thamnolia from SSU and LSU rDNA. Mycologia 93: 475-487.
    • (2000) Mycologia , vol.93 , pp. 475-487
    • Platt, J.L.1    Spatafora, J.W.2
  • 25
    • 0032878010 scopus 로고    scopus 로고
    • Phylogenetic relationships between mating-type sequences from homothallic and heterothallic ascomycetes
    • Pöggeler, S. (1999) Phylogenetic relationships between mating-type sequences from homothallic and heterothallic ascomycetes. Current Genetics 36: 222-231.
    • (1999) Current Genetics , vol.36 , pp. 222-231
    • Pöggeler, S.1
  • 26
    • 0024728477 scopus 로고
    • Disparate evolution of yeasts and filamentous fungi indicated by phylogenetic analysis of glyceraldehyde-3-phosphate dehydrogenase genes
    • Smith, T. L. (1989) Disparate evolution of yeasts and filamentous fungi indicated by phylogenetic analysis of glyceraldehyde-3-phosphate dehydrogenase genes. Proceedings of National Academy of Sciences USA 86: 7063-7066.
    • (1989) Proceedings of National Academy of Sciences USA , vol.86 , pp. 7063-7066
    • Smith, T.L.1
  • 27
    • 0036056437 scopus 로고    scopus 로고
    • Phylogeny of the genus Cladonia s.lat. (Cladoniaceae, Ascomycetes) inferred from molecular, morphological, and chemical data
    • in press
    • Stenroos, S., Hyvönen, J., Myllys, L., Thell, A. & Ahti, T. (2002) Phylogeny of the genus Cladonia s.lat. (Cladoniaceae, Ascomycetes) inferred from molecular, morphological, and chemical data. Cladistics (in press).
    • (2002) Cladistics
    • Stenroos, S.1    Hyvönen, J.2    Myllys, L.3    Thell, A.4    Ahti, T.5
  • 28
    • 0032925659 scopus 로고    scopus 로고
    • The evolutionary biology and population genetics underlying fungal strain typing
    • Taylor, J. W., Geiser, D. M., Burt, A. & Koufopanou, V. (1999) The evolutionary biology and population genetics underlying fungal strain typing. Clinical Microbiology Reviews 12: 126-146.
    • (1999) Clinical Microbiology Reviews , vol.12 , pp. 126-146
    • Taylor, J.W.1    Geiser, D.M.2    Burt, A.3    Koufopanou, V.4
  • 30
    • 21144431534 scopus 로고    scopus 로고
    • Phylogenetic analyses of the fungi based on large rDNA data sets
    • Tehler, A., Farris, J. S., Lipscomb, D. L. & Källersjö, M. (2000) Phylogenetic analyses of the fungi based on large rDNA data sets. Mycologia 92: 459-474.
    • (2000) Mycologia , vol.92 , pp. 459-474
    • Tehler, A.1    Farris, J.S.2    Lipscomb, D.L.3    Källersjö, M.4
  • 31
    • 0027968068 scopus 로고
    • Clustal W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673-4680.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 32
    • 0032994048 scopus 로고    scopus 로고
    • Partial β-tubulin gene sequences for evolutionary studies in the Basidiomycotina
    • Thon, M. R. & Royse, D. J. (1999) Partial β-tubulin gene sequences for evolutionary studies in the Basidiomycotina. Mycologia 91: 468-474.
    • (1999) Mycologia , vol.91 , pp. 468-474
    • Thon, M.R.1    Royse, D.J.2
  • 34
    • 0030783184 scopus 로고    scopus 로고
    • Molecular characterization of the glyceraldehyde-3-phosphate dehydrogenase gene of Phaffia rhodozyma
    • Verdoes, J. C., Wery, J., Boekhout, T. & Van Ooyen, A. J. J. (1997) Molecular characterization of the glyceraldehyde-3-phosphate dehydrogenase gene of Phaffia rhodozyma. Yeast 13: 1231-1242.
    • (1997) Yeast , vol.13 , pp. 1231-1242
    • Verdoes, J.C.1    Wery, J.2    Boekhout, T.3    Van Ooyen, A.J.J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.