메뉴 건너뛰기




Volumn 50, Issue 4, 2009, Pages 291-302

Phylogenetic analyses of Japanese species of Phyllosticta sensu stricto

Author keywords

Endophytic fungi; Phylogeny; Plant pathogenic fungi; Ribosomal DNA; Taxonomy

Indexed keywords

FUNGI; GUIGNARDIA; PHYLLOSTICTA;

EID: 70349440867     PISSN: 13403540     EISSN: 16182545     Source Type: Journal    
DOI: 10.1007/s10267-009-0487-z     Document Type: Article
Times cited : (36)

References (49)
  • 1
    • 0016355478 scopus 로고
    • A new look at the statistical model identification
    • Akaike H (1974) A new look at the statistical model identification. IEEE Trans Autom Control 19:716-723
    • (1974) IEEE Trans Autom Control , vol.19 , pp. 716-723
    • Akaike, H.1
  • 3
    • 70349443972 scopus 로고
    • Coelomycetes on Liliales: The genus Phyllosticta
    • Bissett J (1979) Coelomycetes on Liliales: the genus Phyllosticta. Can J Bot 57:2082-2095
    • (1979) Can J Bot , vol.57 , pp. 2082-2095
    • Bissett, J.1
  • 4
    • 0000367652 scopus 로고
    • The limits of amino acid sequence data in angiosperm phylogenetic reconstruction
    • Bremer K (1988) The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42:795-803
    • (1988) Evolution , vol.42 , pp. 795-803
    • Bremer, K.1
  • 5
    • 43949160320 scopus 로고
    • Branch support and tree stability
    • Bremer K (1994) Branch support and tree stability. Cladistics 10:295-304
    • (1994) Cladistics , vol.10 , pp. 295-304
    • Bremer, K.1
  • 6
    • 0037517868 scopus 로고
    • Further notes on double cover-glass mounts
    • Chupp C (1940) Further notes on double cover-glass mounts. Mycologia 32:269-270
    • (1940) Mycologia , vol.32 , pp. 269-270
    • Chupp, C.1
  • 9
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 10
    • 0036032073 scopus 로고    scopus 로고
    • Contributions towards a monograph of Phoma (Coelomycetes) VI-2. Section Phyllostictoides: Outline of its taxa
    • Gruyter J de, Boerema GH, van der Aa HA (2002) Contributions towards a monograph of Phoma (Coelomycetes) VI-2. Section Phyllostictoides: outline of its taxa. Persoonia 18:1-54
    • (2002) Persoonia , vol.18 , pp. 1-54
    • de Gruyter, J.1    Boerema, G.H.2    van der Aa, H.A.3
  • 11
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 12
    • 0024788504 scopus 로고
    • The nucleotide sequence of the small ribosomal subunit RNA of the yeast Candida albicans and the evolutionary position of the fungi among the Eukaryotes
    • Hendriks L, Goris A, Neefs J, van de Peer Y, Hennebert G, de Wachter R (1989) The nucleotide sequence of the small ribosomal subunit RNA of the yeast Candida albicans and the evolutionary position of the fungi among the Eukaryotes. Syst Appl Microbiol 12:223-229
    • (1989) Syst Appl Microbiol , vol.12 , pp. 223-229
    • Hendriks, L.1    Goris, A.2    Neefs, J.3    van de Peer, Y.4    Hennebert, G.5    de Wachter, R.6
  • 13
    • 39049130072 scopus 로고
    • Etiological and pathological studies on the needle blight of Cryptomeria japonica I: Morphology and pathogenicity of the fungi inhabiting the blighted needles (in Japanese)
    • Ito K, Shibukawa K, Kobayashi T (1952) Etiological and pathological studies on the needle blight of Cryptomeria japonica I: morphology and pathogenicity of the fungi inhabiting the blighted needles (in Japanese). Bull Gov For Exp Stn Tokyo 52:79-152
    • (1952) Bull Gov for Exp Stn Tokyo , vol.52 , pp. 79-152
    • Ito, K.1    Shibukawa, K.2    Kobayashi, T.3
  • 14
    • 0037100671 scopus 로고    scopus 로고
    • MAFFT: A novel method for rapid multiple sequence alignment based on fast Fourier transform
    • Katoh K, Misawa K, Kuma K, Miyata T (2002) MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform. Nucleic Acids Res 30:3059-3066
    • (2002) Nucleic Acids Res , vol.30 , pp. 3059-3066
    • Katoh, K.1    Misawa, K.2    Kuma, K.3    Miyata, T.4
  • 15
    • 13744252890 scopus 로고    scopus 로고
    • MAFFT version 5: Improvement in accuracy of multiple sequence alignment
    • Katoh K, Kuma K, Toh H, Miyata T (2005) MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res 33:511-518
    • (2005) Nucleic Acids Res , vol.33 , pp. 511-518
    • Katoh, K.1    Kuma, K.2    Toh, H.3    Miyata, T.4
  • 16
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 17
    • 0024307824 scopus 로고
    • Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
    • Kishino H, Hasegawa M (1989) Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea. J Mol Evol 29:170-179
    • (1989) J Mol Evol , vol.29 , pp. 170-179
    • Kishino, H.1    Hasegawa, M.2
  • 18
    • 85007911088 scopus 로고
    • Life cycle of shoot blight fungus, Guignardia cryptomeriae Sawada, of Japanese cedar: Cryptomeria japonica D. Don (in Japanese)
    • Kobayashi T (1957a) Life cycle of shoot blight fungus, Guignardia cryptomeriae Sawada, of Japanese cedar: Cryptomeria japonica D. Don (in Japanese). J Jpn For Soc 38:16-19
    • (1957) J Jpn for Soc , vol.38 , pp. 16-19
    • Kobayashi, T.1
  • 19
    • 70349471522 scopus 로고
    • Studies on the shoot blight disease of Japanese cedar, Cryptomeria japonica D. Don, caused by Guignardia cryptomeriae Sawada (in Japanese)
    • Kobayashi T (1957b) Studies on the shoot blight disease of Japanese cedar, Cryptomeria japonica D. Don, caused by Guignardia cryptomeriae Sawada (in Japanese). Bull Gov For Exp Stn Tokyo 96:17-36
    • (1957) Bull Gov for Exp Stn Tokyo , vol.96 , pp. 17-36
    • Kobayashi, T.1
  • 20
    • 70349465254 scopus 로고
    • A blight disease of larch caused by Guignardia cryptomeriae Sawada in comparison with the shoot blight caused by Physalospora laricina Sawada (in Japanese)
    • Kobayashi T (1962) A blight disease of larch caused by Guignardia cryptomeriae Sawada in comparison with the shoot blight caused by Physalospora laricina Sawada (in Japanese). J Jpn For Soc 44:282-286
    • (1962) J Jpn for Soc , vol.44 , pp. 282-286
    • Kobayashi, T.1
  • 21
    • 2042510924 scopus 로고
    • Notes on new or little-known fungi inhabiting woody plant in Japan VII
    • Kobayashi T, Sasaki K (1975) Notes on new or little-known fungi inhabiting woody plant in Japan VII. Trans Mycol Soc Jpn 16: 230-244
    • (1975) Trans Mycol Soc Jpn , vol.16 , pp. 230-244
    • Kobayashi, T.1    Sasaki, K.2
  • 22
    • 5844220035 scopus 로고
    • Black rot of muscadine grapes
    • Luttrell ES (1946) Black rot of muscadine grapes. Phytopathology 36:905-924
    • (1946) Phytopathology , vol.36 , pp. 905-924
    • Luttrell, E.S.1
  • 23
    • 33746102328 scopus 로고
    • Physiologic specialization in Guignardia bidwellii, cause of black rot of Vitis and Parthenocissus species
    • Luttrell ES (1948) Physiologic specialization in Guignardia bidwellii, cause of black rot of Vitis and Parthenocissus species. Phytopathology 38:716-723
    • (1948) Phytopathology , vol.38 , pp. 716-723
    • Luttrell, E.S.1
  • 25
    • 0037407837 scopus 로고    scopus 로고
    • Evolution of host-parasite relationships of Golovinomyces (Ascomycete: Erysiphaceae) inferred from nuclear rDNA sequences
    • Matsuda S, Takamatsu S (2003) Evolution of host-parasite relationships of Golovinomyces (Ascomycete: Erysiphaceae) inferred from nuclear rDNA sequences. Mol Phylogenet Evol 27:314-327
    • (2003) Mol Phylogenet Evol , vol.27 , pp. 314-327
    • Matsuda, S.1    Takamatsu, S.2
  • 26
    • 29644432193 scopus 로고    scopus 로고
    • A one-day sensitive method to detect and distinguish between the citrus black spot pathogen Guignardia citricarpa and the endophyte Guignardia mangiferae
    • Meyer L, Sanders GM, Jacobs R, Korsten L (2006) A one-day sensitive method to detect and distinguish between the citrus black spot pathogen Guignardia citricarpa and the endophyte Guignardia mangiferae. Plant Dis 90:97-101
    • (2006) Plant Dis , vol.90 , pp. 97-101
    • Meyer, L.1    Sanders, G.M.2    Jacobs, R.3    Korsten, L.4
  • 27
    • 70349443971 scopus 로고    scopus 로고
    • Studies on molecular phylogeny of Guignardia canker disease on Cryptomeria japonica, Chamaecyparis obtusa and other genera (in Japanese)
    • Miyashita S (2001) Studies on molecular phylogeny of Guignardia canker disease on Cryptomeria japonica, Chamaecyparis obtusa and other genera (in Japanese). Trans Jpn For Soc Tokyo 115:290
    • (2001) Trans Jpn for Soc Tokyo , vol.115 , pp. 290
    • Miyashita, S.1
  • 28
    • 39049137463 scopus 로고    scopus 로고
    • Studies on the Japanese species belonging to the genus Phyllosticta (1)
    • Motohashi K, Nishikawa J, Akiba M, Nakashima C (2008) Studies on the Japanese species belonging to the genus Phyllosticta (1). Mycoscience 49:11-18
    • (2008) Mycoscience , vol.49 , pp. 11-18
    • Motohashi, K.1    Nishikawa, J.2    Akiba, M.3    Nakashima, C.4
  • 29
    • 38049148811 scopus 로고    scopus 로고
    • Etiological studies on brown spot disease of Pyracantha
    • Nakashima C, Kobayashi T (1997) Etiological studies on brown spot disease of Pyracantha. Ann Phytopathol Soc Jpn 63:309-315
    • (1997) Ann Phytopathol Soc Jpn , vol.63 , pp. 309-315
    • Nakashima, C.1    Kobayashi, T.2
  • 30
    • 85031333300 scopus 로고    scopus 로고
    • Nylander JAA (2004) MrModeltest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University
    • Nylander JAA (2004) MrModeltest v2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University.
  • 32
    • 0035082842 scopus 로고    scopus 로고
    • Identity of Guignardia sp. inhabiting ericaceous plants
    • Okane I, Nakagiri A, Ito T (2001) Identity of Guignardia sp. inhabiting ericaceous plants. Can J Bot 79:101-109
    • (2001) Can J Bot , vol.79 , pp. 101-109
    • Okane, I.1    Nakagiri, A.2    Ito, T.3
  • 33
    • 0346361699 scopus 로고    scopus 로고
    • Extensive host range of an endophytic fungus Guignardia endophyllicola (anamorph: Phyllosticta capitalensis)
    • Okane I, Lumyong S, Nakagiri A, Ito T (2003) Extensive host range of an endophytic fungus Guignardia endophyllicola (anamorph: Phyllosticta capitalensis). Mycoscience 44:353-363
    • (2003) Mycoscience , vol.44 , pp. 353-363
    • Okane, I.1    Lumyong, S.2    Nakagiri, A.3    Ito, T.4
  • 34
    • 0038622889 scopus 로고    scopus 로고
    • ITS-RFLP and ITS sequence analysis of a foliar endophytic Phyllosticta from different tropical trees
    • Pandey AK, Reddy MS, Suryanarayanan TS (2003) ITS-RFLP and ITS sequence analysis of a foliar endophytic Phyllosticta from different tropical trees. Mycol Res 107:439-444
    • (2003) Mycol Res , vol.107 , pp. 439-444
    • Pandey, A.K.1    Reddy, M.S.2    Suryanarayanan, T.S.3
  • 35
    • 34247536680 scopus 로고    scopus 로고
    • Comparison of molecular procedures for detection and identification of Guignardia citricarpa and G. mangiferae
    • Peres NA, Harakava R, Carroll GC, Adaskaveg JE, Timmer LW (2007) Comparison of molecular procedures for detection and identification of Guignardia citricarpa and G. mangiferae. Plant Dis 91:525-531
    • (2007) Plant Dis , vol.91 , pp. 525-531
    • Peres, N.A.1    Harakava, R.2    Carroll, G.C.3    Adaskaveg, J.E.4    Timmer, L.W.5
  • 36
    • 84982338470 scopus 로고
    • Über einige Arten der Gattung Guignardia Viala et Ravaz
    • Reusser FA (1964) Über einige Arten der Gattung Guignardia Viala et Ravaz. Phytopathol Z 51:205-240
    • (1964) Phytopathol Z , vol.51 , pp. 205-240
    • Reusser, F.A.1
  • 37
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19:1572-1574
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 38
    • 0010808547 scopus 로고
    • Fungi Veneti novi vel critici, series 7
    • Saccardo PA (1878) Fungi Veneti novi vel critici, series 7. Michelia 1:133-221
    • (1878) Michelia , vol.1 , pp. 133-221
    • Saccardo, P.A.1
  • 40
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 41
    • 34547603278 scopus 로고
    • Fungi inhabiting on conifers in the Tohoku district (I). Fungi on Sugi (Cryptomeria japonica D. Don.) (in Japanese)
    • Sawada K (1950) Fungi inhabiting on conifers in the Tohoku district (I). Fungi on Sugi (Cryptomeria japonica D. Don.) (in Japanese). Bull Gov For Exp Stn Tokyo 45:27-53
    • (1950) Bull Gov for Exp Stn Tokyo , vol.45 , pp. 27-53
    • Sawada, K.1
  • 42
    • 0347865270 scopus 로고
    • The leaf blotch disease of horse-chestnut
    • Stewart VB (1916) The leaf blotch disease of horse-chestnut. Phytopathology 6:5-19
    • (1916) Phytopathology , vol.6 , pp. 5-19
    • Stewart, V.B.1
  • 44
    • 0002671410 scopus 로고
    • Some probabilistic and statistical problems on the analysis of DNA sequences
    • Tavaré S (1986) Some probabilistic and statistical problems on the analysis of DNA sequences. Lect Math Life Sci 17:57-86
    • (1986) Lect Math Life Sci , vol.17 , pp. 57-86
    • Tavaré, S.1
  • 46
    • 0003063855 scopus 로고
    • Studies in Phyllosticta
    • van der Aa HA (1973) Studies in Phyllosticta. I. Stud Mycol 5:1-110
    • (1973) I. Stud Mycol , vol.5 , pp. 1-110
    • van der Aa, H.A.1
  • 47
    • 0002507699 scopus 로고
    • Species concepts in some larger genera of the Coelomycetes
    • van der Aa HA, Noordeloos ME, de Gruyter J (1990) Species concepts in some larger genera of the Coelomycetes. Stud Mycol 32:3-19
    • (1990) Stud Mycol , vol.32 , pp. 3-19
    • van der Aa, H.A.1    Noordeloos, M.E.2    de Gruyter, J.3
  • 49
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal genes for phylogenetics
    • M. A. Innis, D. H. Gelfand, J. J. Shinsky, and T. J. White (Eds.), San Diego: Academic Press
    • White TJ, Bruns TD, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal genes for phylogenetics. In: Innis MA, Gelfand DH, Shinsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications. Academic Press, San Diego, pp 315-322
    • (1990) PCR Protocols: A Guide to Methods and Applications , pp. 315-322
    • White, T.J.1    Bruns, T.D.2    Lee, S.3    Taylor, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.