Replica exchange Monte-Carlo simulations of helix bundle membrane proteins: Rotational parameters of helices

Journal of Computer-Aided Molecular Design

Volumn 26, Issue 3, 2012, Pages 363-374

  Wu, H H ^a   Chen, C C ^a   Chen, C M ^a  

^a NATIONAL TAIWAN NORMAL UNIVERSITY   (Taiwan)

Author keywords

Helix bundle membrane proteins; Molecular dynamics simulations; Monte Carlo simulations; Structure prediction

Indexed keywords

BIOLOGICAL MEMBRANES; COARSE-GRAINED MODELING; GROUND STATE; INTELLIGENT SYSTEMS; MONTE CARLO METHODS; PROTEINS;

DYNAMICS SIMULATION; HALORHODOPSIN; HELIX BUNDLE; HELIX BUNDLE MEMBRANE PROTEIN; MEMBRANE PROTEINS; MOLECULAR DYNAMIC SIMULATION; MONTE CARLO'S SIMULATION; REPLICA EXCHANGE; STRUCTURE PREDICTION; TRANSMEMBRANE HELIX;

MOLECULAR DYNAMICS;

BACTERIORHODOPSIN; HALORHODOPSIN; MEMBRANE PROTEIN;

ALGORITHM; ARTICLE; CIRCULAR DICHROISM; COMPUTER PREDICTION; CONTROLLED STUDY; HELIX BUNDLE; MATHEMATICAL MODEL; MOLECULAR DYNAMICS; MOLECULAR INTERACTION; MONTE CARLO METHOD; PREDICTIVE VALUE; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN DOMAIN; PROTEIN STRUCTURE; STRUCTURE ANALYSIS; X RAY ANALYSIS;

EID: 84863106674     PISSN: 0920654X     EISSN: 15734951     Source Type: Journal    
DOI: 10.1007/s10822-012-9562-1     Document Type: Article

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