-
1
-
-
0025249842
-
Membrane protein folding and oligomerization: The two-stage model
-
Popot, J.-L. and Engelman, D.M. Membrane protein folding and oligomerization: The two-stage model. Biochemistry 29, 4031-4037 (1990).
-
(1990)
Biochemistry
, vol.29
, pp. 4031-4037
-
-
Popot, J.-L.1
Engelman, D.M.2
-
3
-
-
0002623852
-
Optimization techniques with applications to proteins
-
ed. Elber, R. World Scientific, Singapore
-
Straub, J.E. Optimization techniques with applications to proteins. In Recent developments in theoretical studies of proteins (ed. Elber, R.) 137-196 (World Scientific, Singapore; 1996).
-
(1996)
Recent Developments in Theoretical Studies of Proteins
, pp. 137-196
-
-
Straub, J.E.1
-
4
-
-
0041641037
-
Conformational energy minimization using a two-stage method
-
Nakamura, S., Hirose, H., Ikeguchi, M. & Doi, J. Conformational energy minimization using a two-stage method. J Phys. Chem. 99, 8374-8378 (1995).
-
(1995)
J Phys. Chem.
, vol.99
, pp. 8374-8378
-
-
Nakamura, S.1
Hirose, H.2
Ikeguchi, M.3
Doi, J.4
-
5
-
-
0038424321
-
Analysis and application of potential energy smoothing and search methods for global optimization
-
Pappu, R.V., Hart, R.K. & Ponder, J.W. Analysis and application of potential energy smoothing and search methods for global optimization. J. Phys. Chem. B 102, 9725-9742 (1998).
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 9725-9742
-
-
Pappu, R.V.1
Hart, R.K.2
Ponder, J.W.3
-
6
-
-
0000594925
-
The multiple-minima problem in the conformational analysis of molecules. Deformation of the potential energy hypersurface by the diffusion equation method
-
Piela, L., Kostrowicki, J. & Scheraga, H.A. The multiple-minima problem in the conformational analysis of molecules. Deformation of the potential energy hypersurface by the diffusion equation method. J. Phys. Chem. 93, 3339-3346 (1989).
-
(1989)
J. Phys. Chem.
, vol.93
, pp. 3339-3346
-
-
Piela, L.1
Kostrowicki, J.2
Scheraga, H.A.3
-
7
-
-
0001031118
-
Application of the diffusion equation method for global optimization to oligopeptides
-
Kostrowicki, J. & Scheraga, H.A. Application of the diffusion equation method for global optimization to oligopeptides. J. Phys. Chem. 96, 7442-7449 (1992).
-
(1992)
J. Phys. Chem.
, vol.96
, pp. 7442-7449
-
-
Kostrowicki, J.1
Scheraga, H.A.2
-
8
-
-
0030932407
-
A transmembrane helix dimer: Structure and implications
-
MacKenzie, K.R., Prestegard, J.H. & Engelman, D.M.A transmembrane helix dimer: Structure and implications. Science 276, 131-133 (1997).
-
(1997)
Science
, vol.276
, pp. 131-133
-
-
MacKenzie, K.R.1
Prestegard, J.H.2
Engelman, D.M.3
-
9
-
-
0003684555
-
-
Washington University School of Medicine, February
-
TINKER Software Tools for Molecular Design, Version 3.6, Washington University School of Medicine, February 1998, available from http://dasher.wustl-edu/tinker/.
-
(1998)
TINKER Software Tools for Molecular Design, Version 3.6
-
-
-
10
-
-
33645941402
-
The OPLS potential functions for proteins. Energy minimizations for crystals of cyclic peptides and crambin
-
Jorgensen, W. L. & Tirado-Rives, J. The OPLS potential functions for proteins. Energy minimizations for crystals of cyclic peptides and crambin. J. Am. Chem. Soc. 110, 1657-1666 (1988).
-
(1988)
J. Am. Chem. Soc.
, vol.110
, pp. 1657-1666
-
-
Jorgensen, W.L.1
Tirado-Rives, J.2
-
11
-
-
0027160197
-
Backbone-dependent rotamer library for proteins. Application to side-chain prediction
-
Dunbrack, R.L. Jr & Karplus, M. Backbone-dependent rotamer library for proteins. Application to side-chain prediction. J. Mol. Biol. 230, 543-574 (1993).
-
(1993)
J. Mol. Biol.
, vol.230
, pp. 543-574
-
-
Dunbrack Jr., R.L.1
Karplus, M.2
-
12
-
-
0019872825
-
Helix to helix packing in proteins
-
Chothia, C., Levitt, M. & Richardson, D. Helix to helix packing in proteins. J. Mol. Biol. 145, 215-250 (1981).
-
(1981)
J. Mol. Biol.
, vol.145
, pp. 215-250
-
-
Chothia, C.1
Levitt, M.2
Richardson, D.3
-
13
-
-
0031926765
-
Guidelines for membrane protein engineering derived from de novo designed model peptides
-
Liu, L-P. and Deber, C.M. Guidelines for membrane protein engineering derived from de novo designed model peptides. Biopolymers 47, 41-61 (1998).
-
(1998)
Biopolymers
, vol.47
, pp. 41-61
-
-
Liu, L.-P.1
Deber, C.M.2
-
14
-
-
0028086531
-
Specificity and promiscuity in membrane helix interactions
-
Lemmon, M.A. and Engelman, D.M. Specificity and promiscuity in membrane helix interactions. Quart. Rev. Biophys. 27, 157-218 (1994).
-
(1994)
Quart. Rev. Biophys.
, vol.27
, pp. 157-218
-
-
Lemmon, M.A.1
Engelman, D.M.2
-
15
-
-
0031956790
-
The dimerization motif of the glycophorin A transmembrane segment in membranes: Importance of glycine residues
-
Brosig, B. and Langosch, D. The dimerization motif of the glycophorin A transmembrane segment in membranes: Importance of glycine residues. Prot. Sci. 7, 1052-1056 (1998).
-
(1998)
Prot. Sci.
, vol.7
, pp. 1052-1056
-
-
Brosig, B.1
Langosch, D.2
-
16
-
-
0029847652
-
Improved prediction for the structure of the dimeric transmembrane domain of glycophorin A obtained through global searching
-
Adams, P.D., Engelman, D.M. & Brünger, A.T. Improved prediction for the structure of the dimeric transmembrane domain of glycophorin A obtained through global searching. Proteins Struct. Funct. Genet. 26, 257-261 (1996).
-
(1996)
Proteins Struct. Funct. Genet.
, vol.26
, pp. 257-261
-
-
Adams, P.D.1
Engelman, D.M.2
Brünger, A.T.3
-
17
-
-
4944265163
-
Global energy minimum searches using an approximate solution of the imaginary time Schrödinger equation
-
Amara, P., Hsu, D. and Straub, J.E. Global energy minimum searches using an approximate solution of the imaginary time Schrödinger equation. J. Phys. Chem. 97, 6715-6721 (1993).
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 6715-6721
-
-
Amara, P.1
Hsu, D.2
Straub, J.E.3
-
18
-
-
0026244229
-
MOLSCRIPT: A program to produce both detailed and schematic plots of proteins structures
-
Kraulis, P. J. MOLSCRIPT: a program to produce both detailed and schematic plots of proteins structures. J. Appl. Crystallogr. 24, 946-950 (1991).
-
(1991)
J. Appl. Crystallogr.
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
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