메뉴 건너뛰기




Volumn 12, Issue SUPPL. 3, 2011, Pages

In silico prediction of the granzyme B degradome

Author keywords

[No Author keywords available]

Indexed keywords

ANTIVIRAL ACTIVITIES; CASPASES; CELLULAR PROCESS; CHIKUNGUNYA; CLEAVAGE SITES; DATA SETS; FUNCTIONAL CLASS; GRANZYME B; IN-SILICO; INNATE IMMUNE RESPONSE; POTENTIAL SITES; PREDICTION METHODS; REGULATORY DOMAIN; SERINE PROTEASE; SVM CLASSIFIERS; TEST SETS; TETRAPEPTIDE SEQUENCE; VIRAL PROTEINS;

EID: 84862250366     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1186/1471-2164-12-S3-S11     Document Type: Conference Paper
Times cited : (9)

References (21)
  • 1
    • 0036302814 scopus 로고    scopus 로고
    • Protease degradomics: A new challenge for proteomics
    • López-Otín C, Overall CM: Protease degradomics: a new challenge for proteomics. Nat Rev Mol Cell Biol 2002, 3:509-519.
    • (2002) Nat Rev Mol Cell Biol , vol.3 , pp. 509-519
    • López-Otín, C.1    Overall, C.M.2
  • 2
    • 42949098879 scopus 로고    scopus 로고
    • Death by a thousand cuts: Granzyme pathways of programmed cell death
    • Chowdhury D, Lieberman J: Death by a thousand cuts: granzyme pathways of programmed cell death. Annu Rev Immunol 2008, 26:389-420.
    • (2008) Annu Rev Immunol , vol.26 , pp. 389-420
    • Chowdhury, D.1    Lieberman, J.2
  • 6
    • 84871967410 scopus 로고    scopus 로고
    • SVM-based prediction of caspase substrate cleavage sites
    • Wee LJ, Tan TW, Ranganathan S: SVM-based prediction of caspase substrate cleavage sites. BMC Bioinformatics 2006, 7(Suppl 5):S14.
    • (2006) BMC Bioinformatics , vol.7 , Issue.SUPPL. 5
    • Wee, L.J.1    Tan, T.W.2    Ranganathan, S.3
  • 9
    • 23144444029 scopus 로고    scopus 로고
    • GraBCas: A bioinformatics tool for score-based prediction of Caspase- and Granzyme B-cleavage sites in protein sequences
    • Backes C, Kuentzer J, Lenhof HP, Comtesse N, Meese E: GraBCas: a bioinformatics tool for score-based prediction of Caspase- and Granzyme B-cleavage sites in protein sequences. Nucleic Acids Res 2005, 33(Web server issue):W208-W213.
    • (2005) Nucleic Acids Res , vol.33
    • Backes, C.1    Kuentzer, J.2    Lenhof, H.P.3    Comtesse, N.4    Meese, E.5
  • 11
    • 62849118051 scopus 로고    scopus 로고
    • Computational identification of protein methylation sites through bi-profile Bayes feature extraction
    • Shao J, Xu D, Tsai SN, Wang Y, Ngai SM: Computational identification of protein methylation sites through bi-profile Bayes feature extraction. PLoS One 2009, 4:e4920.
    • (2009) PLoS One , vol.4
    • Shao, J.1    Xu, D.2    Tsai, S.N.3    Wang, Y.4    Ngai, S.M.5
  • 13
    • 84862250366 scopus 로고    scopus 로고
    • Page 7 of 8 13
    • Wee et al. BMC Genomics 2011, 12(Suppl 3):S11 http://www.biomedcentral. com/1471-2164/12/S3/S11 Page 7 of 8 13.
    • (2011) BMC Genomics , vol.12 , Issue.SUPPL. 3
    • Wee1
  • 14
    • 78649796508 scopus 로고    scopus 로고
    • SVM-based prediction of linear B-cell epitopes using Bayes feature extraction
    • Wee LJ, Simarmata D, Kam YW, Ng LF, Tong JC: SVM-based prediction of linear B-cell epitopes using Bayes feature extraction. BMC Genomics 2010, 11(Suppl 4):S21.
    • (2010) BMC Genomics , vol.11 , Issue.SUPPL. 4
    • Wee, L.J.1    Simarmata, D.2    Kam, Y.W.3    Ng, L.F.4    Tong, J.C.5
  • 16
    • 42149142424 scopus 로고    scopus 로고
    • Non-apoptotic functions of granzymes
    • Romero V, Andrade F: Non-apoptotic functions of granzymes. Tissue Antigens 2008, 71:409-416.
    • (2008) Tissue Antigens , vol.71 , pp. 409-416
    • Romero, V.1    Andrade, F.2
  • 17
    • 71949131286 scopus 로고    scopus 로고
    • Immuno-biology of Chikungunya and implications for disease intervention
    • Kam YW, Ong EK, Rénia L, Tong JC, Ng LFP: Immuno-biology of Chikungunya and implications for disease intervention. Microbes Infect 2009, 11:1186-1196.
    • (2009) Microbes Infect , vol.11 , pp. 1186-1196
    • Kam, Y.W.1    Ong, E.K.2    Rénia, L.3    Tong, J.C.4    Ng, L.F.P.5
  • 18
    • 77949601825 scopus 로고    scopus 로고
    • CD-HIT Suite: A web server for clustering and comparing biological sequences
    • Huang Y, Niu B, Gao Y, Fu L, Li W: CD-HIT Suite: a web server for clustering and comparing biological sequences. Bioinformatics 2010, 26:680-682.
    • (2010) Bioinformatics , vol.26 , pp. 680-682
    • Huang, Y.1    Niu, B.2    Gao, Y.3    Fu, L.4    Li, W.5
  • 21
    • 27144489164 scopus 로고    scopus 로고
    • A tutorial on support vector machines for pattern recognition
    • Burges CJC: A tutorial on support vector machines for pattern recognition. Data Mining and Knowledge Discovery 1998, 2:121-167.
    • (1998) Data Mining and Knowledge Discovery , vol.2 , pp. 121-167
    • Burges, C.J.C.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.