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Volumn 11, Issue 6, 2012, Pages 3405-3413

Multidimensional identification of tissue biomarkers of gastric cancer

Author keywords

gastric cancer; plasma membrane; proteome; tissue microarray; transcriptome

Indexed keywords

BIOLOGICAL MARKER; EPHRIN RECEPTOR A2; FIBROBLAST GROWTH FACTOR RECEPTOR 2; MEMBRANE PROTEIN; PLASMA PROTEIN; PROTEIN TYROSINE KINASE; SCATTER FACTOR RECEPTOR; TRANSCRIPTOME; PROTEOME; TUMOR MARKER;

EID: 84861827654     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr300212g     Document Type: Article
Times cited : (14)

References (48)
  • 1
    • 33646568784 scopus 로고    scopus 로고
    • Patterns of cancer incidence, mortality, and prevalence across five continents: Defining priorities to reduce cancer disparities in different geographic regions of the world
    • Kamangar, F.; Dores, G. M.; Anderson, W. F. Patterns of cancer incidence, mortality, and prevalence across five continents: defining priorities to reduce cancer disparities in different geographic regions of the world J. Clin. Oncol. 2006, 24 (14) 2137-50
    • (2006) J. Clin. Oncol. , vol.24 , Issue.14 , pp. 2137-2150
    • Kamangar, F.1    Dores, G.M.2    Anderson, W.F.3
  • 2
    • 77956262693 scopus 로고    scopus 로고
    • Trastuzumab in combination with chemotherapy versus chemotherapy alone for treatment of HER2-positive advanced gastric or gastro-oesophageal junction cancer (ToGA): A phase 3, open-label, randomised controlled trial
    • Bang, Y. J.; Van Cutsem, E.; Feyereislova, A.; Chung, H. C.; Shen, L.; Sawaki, A.; Lordick, F.; Ohtsu, A.; Omuro, Y.; Satoh, T.; Aprile, G.; Kulikov, E.; Hill, J.; Lehle, M.; Ruschoff, J.; Kang, Y. K. Trastuzumab in combination with chemotherapy versus chemotherapy alone for treatment of HER2-positive advanced gastric or gastro-oesophageal junction cancer (ToGA): a phase 3, open-label, randomised controlled trial Lancet 2010, 376 (9742) 687-97
    • (2010) Lancet , vol.376 , Issue.9742 , pp. 687-697
    • Bang, Y.J.1    Van Cutsem, E.2    Feyereislova, A.3    Chung, H.C.4    Shen, L.5    Sawaki, A.6    Lordick, F.7    Ohtsu, A.8    Omuro, Y.9    Satoh, T.10    Aprile, G.11    Kulikov, E.12    Hill, J.13    Lehle, M.14    Ruschoff, J.15    Kang, Y.K.16
  • 3
    • 0035910270 scopus 로고    scopus 로고
    • Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
    • Krogh, A.; Larsson, B.; von Heijne, G.; Sonnhammer, E. L. Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes J. Mol. Biol. 2001, 305 (3) 567-80
    • (2001) J. Mol. Biol. , vol.305 , Issue.3 , pp. 567-580
    • Krogh, A.1    Larsson, B.2    Von Heijne, G.3    Sonnhammer, E.L.4
  • 4
    • 77954730167 scopus 로고    scopus 로고
    • Plasma membrane proteomics and its application in clinical cancer biomarker discovery
    • Leth-Larsen, R.; Lund, R. R.; Ditzel, H. J. Plasma membrane proteomics and its application in clinical cancer biomarker discovery Mol. Cell. Proteomics 2010, 9 (7) 1369-82
    • (2010) Mol. Cell. Proteomics , vol.9 , Issue.7 , pp. 1369-1382
    • Leth-Larsen, R.1    Lund, R.R.2    Ditzel, H.J.3
  • 7
    • 52749099497 scopus 로고    scopus 로고
    • Assessment of somatic k-RAS mutations as a mechanism associated with resistance to EGFR-targeted agents: A systematic review and meta-analysis of studies in advanced non-small-cell lung cancer and metastatic colorectal cancer
    • Linardou, H.; Dahabreh, I. J.; Kanaloupiti, D.; Siannis, F.; Bafaloukos, D.; Kosmidis, P.; Papadimitriou, C. A.; Murray, S. Assessment of somatic k-RAS mutations as a mechanism associated with resistance to EGFR-targeted agents: a systematic review and meta-analysis of studies in advanced non-small-cell lung cancer and metastatic colorectal cancer Lancet Oncol. 2008, 9 (10) 962-72
    • (2008) Lancet Oncol. , vol.9 , Issue.10 , pp. 962-972
    • Linardou, H.1    Dahabreh, I.J.2    Kanaloupiti, D.3    Siannis, F.4    Bafaloukos, D.5    Kosmidis, P.6    Papadimitriou, C.A.7    Murray, S.8
  • 8
    • 78650026375 scopus 로고    scopus 로고
    • ALK inhibition for non-small cell lung cancer: From discovery to therapy in record time
    • Gerber, D. E.; Minna, J. D. ALK inhibition for non-small cell lung cancer: from discovery to therapy in record time Cancer Cell 2010, 18 (6) 548-51
    • (2010) Cancer Cell , vol.18 , Issue.6 , pp. 548-551
    • Gerber, D.E.1    Minna, J.D.2
  • 9
    • 84859140047 scopus 로고    scopus 로고
    • Improving treatment of HER2-positive cancers: Opportunities and challenges
    • Stern, H. M. Improving treatment of HER2-positive cancers: opportunities and challenges Sci. Transl. Med. 2012, 4 (127) 127rv2
    • (2012) Sci. Transl. Med. , vol.4 , Issue.127
    • Stern, H.M.1
  • 11
    • 66149125644 scopus 로고    scopus 로고
    • Challenges and opportunities in defining the essential cancer kinome
    • Manning, B. D. Challenges and opportunities in defining the essential cancer kinome Sci. Signaling 2009, 2 (63) pe15
    • (2009) Sci. Signaling , vol.2 , Issue.63 , pp. 15
    • Manning, B.D.1
  • 12
    • 2342591455 scopus 로고    scopus 로고
    • The discovery of receptor tyrosine kinases: Targets for cancer therapy
    • Gschwind, A.; Fischer, O. M.; Ullrich, A. The discovery of receptor tyrosine kinases: targets for cancer therapy Nat. Rev. Cancer 2004, 4 (5) 361-70
    • (2004) Nat. Rev. Cancer , vol.4 , Issue.5 , pp. 361-370
    • Gschwind, A.1    Fischer, O.M.2    Ullrich, A.3
  • 14
    • 77955763968 scopus 로고    scopus 로고
    • The combination of multiple receptor tyrosine kinase inhibitor and mammalian target of rapamycin inhibitor overcomes erlotinib resistance in lung cancer cell lines through c-Met inhibition
    • Nakachi, I.; Naoki, K.; Soejima, K.; Kawada, I.; Watanabe, H.; Yasuda, H.; Nakayama, S.; Yoda, S.; Satomi, R.; Ikemura, S.; Terai, H.; Sato, T.; Ishizaka, A. The combination of multiple receptor tyrosine kinase inhibitor and mammalian target of rapamycin inhibitor overcomes erlotinib resistance in lung cancer cell lines through c-Met inhibition Mol. Cancer Res. 2010, 8 (8) 1142-51
    • (2010) Mol. Cancer Res. , vol.8 , Issue.8 , pp. 1142-1151
    • Nakachi, I.1    Naoki, K.2    Soejima, K.3    Kawada, I.4    Watanabe, H.5    Yasuda, H.6    Nakayama, S.7    Yoda, S.8    Satomi, R.9    Ikemura, S.10    Terai, H.11    Sato, T.12    Ishizaka, A.13
  • 15
    • 79953192195 scopus 로고    scopus 로고
    • Overcoming key technological challenges in using mass spectrometry for mapping cell surfaces in tissues
    • 000935
    • Griffin, N. M.; Schnitzer, J. E. Overcoming key technological challenges in using mass spectrometry for mapping cell surfaces in tissues Mol. Cell. Proteomics 2011, 10 (2) R110 000935
    • (2011) Mol. Cell. Proteomics , vol.10 , Issue.2 , pp. 110
    • Griffin, N.M.1    Schnitzer, J.E.2
  • 17
    • 77950632171 scopus 로고    scopus 로고
    • Simultaneous characterization of glyco- and phosphoproteomes of mouse brain membrane proteome with electrostatic repulsion hydrophilic interaction chromatography
    • Zhang, H.; Guo, T.; Li, X.; Datta, A.; Park, J. E.; Yang, J.; Lim, S. K.; Tam, J. P.; Sze, S. K. Simultaneous characterization of glyco- and phosphoproteomes of mouse brain membrane proteome with electrostatic repulsion hydrophilic interaction chromatography Mol. Cell. Proteomics 2010, 9 (4) 635-47
    • (2010) Mol. Cell. Proteomics , vol.9 , Issue.4 , pp. 635-647
    • Zhang, H.1    Guo, T.2    Li, X.3    Datta, A.4    Park, J.E.5    Yang, J.6    Lim, S.K.7    Tam, J.P.8    Sze, S.K.9
  • 18
    • 0020039866 scopus 로고
    • Isolation of intracellular membranes by means of sodium carbonate treatment: Application to endoplasmic reticulum
    • Fujiki, Y.; Hubbard, A. L.; Fowler, S.; Lazarow, P. B. Isolation of intracellular membranes by means of sodium carbonate treatment: application to endoplasmic reticulum J. Cell Biol. 1982, 93 (1) 97-102
    • (1982) J. Cell Biol. , vol.93 , Issue.1 , pp. 97-102
    • Fujiki, Y.1    Hubbard, A.L.2    Fowler, S.3    Lazarow, P.B.4
  • 19
    • 0037108887 scopus 로고    scopus 로고
    • Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
    • Keller, A.; Nesvizhskii, A. I.; Kolker, E.; Aebersold, R. Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search Anal. Chem. 2002, 74 (20) 5383-92
    • (2002) Anal. Chem. , vol.74 , Issue.20 , pp. 5383-5392
    • Keller, A.1    Nesvizhskii, A.I.2    Kolker, E.3    Aebersold, R.4
  • 20
    • 0042338362 scopus 로고    scopus 로고
    • A statistical model for identifying proteins by tandem mass spectrometry
    • Nesvizhskii, A. I.; Keller, A.; Kolker, E.; Aebersold, R. A statistical model for identifying proteins by tandem mass spectrometry Anal. Chem. 2003, 75 (17) 4646-58
    • (2003) Anal. Chem. , vol.75 , Issue.17 , pp. 4646-4658
    • Nesvizhskii, A.I.1    Keller, A.2    Kolker, E.3    Aebersold, R.4
  • 22
    • 74049132731 scopus 로고    scopus 로고
    • Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis
    • Griffin, N. M.; Yu, J.; Long, F.; Oh, P.; Shore, S.; Li, Y.; Koziol, J. A.; Schnitzer, J. E. Label-free, normalized quantification of complex mass spectrometry data for proteomic analysis Nat. Biotechnol. 2010, 28 (1) 83-9
    • (2010) Nat. Biotechnol. , vol.28 , Issue.1 , pp. 83-89
    • Griffin, N.M.1    Yu, J.2    Long, F.3    Oh, P.4    Shore, S.5    Li, Y.6    Koziol, J.A.7    Schnitzer, J.E.8
  • 23
    • 79958199896 scopus 로고    scopus 로고
    • Global molecular dysfunctions in gastric cancer revealed by an integrated analysis of the phosphoproteome and transcriptome
    • Guo, T.; Lee, S. S.; Ng, W. H.; Zhu, Y.; Gan, C. S.; Zhu, J.; Wang, H.; Huang, S.; Sze, S. K.; Kon, O. L. Global molecular dysfunctions in gastric cancer revealed by an integrated analysis of the phosphoproteome and transcriptome Cell. Mol. Life Sci. 2011, 68 (11) 1983-2002
    • (2011) Cell. Mol. Life Sci. , vol.68 , Issue.11 , pp. 1983-2002
    • Guo, T.1    Lee, S.S.2    Ng, W.H.3    Zhu, Y.4    Gan, C.S.5    Zhu, J.6    Wang, H.7    Huang, S.8    Sze, S.K.9    Kon, O.L.10
  • 24
    • 0036839597 scopus 로고    scopus 로고
    • Genomic and proteomic analysis of the myeloid differentiation program: Global analysis of gene expression during induced differentiation in the MPRO cell line
    • Lian, Z.; Kluger, Y.; Greenbaum, D. S.; Tuck, D.; Gerstein, M.; Berliner, N.; Weissman, S. M.; Newburger, P. E. Genomic and proteomic analysis of the myeloid differentiation program: global analysis of gene expression during induced differentiation in the MPRO cell line Blood 2002, 100 (9) 3209-20
    • (2002) Blood , vol.100 , Issue.9 , pp. 3209-3220
    • Lian, Z.1    Kluger, Y.2    Greenbaum, D.S.3    Tuck, D.4    Gerstein, M.5    Berliner, N.6    Weissman, S.M.7    Newburger, P.E.8
  • 29
    • 79957845279 scopus 로고    scopus 로고
    • Distinctions in gastric cancer gene expression signatures derived from laser capture microdissection versus histologic macrodissection
    • Kim, H. K.; Kim, J.; Korolevich, S.; Choi, I. J.; Kim, C. H.; Munroe, D. J.; Green, J. E. Distinctions in gastric cancer gene expression signatures derived from laser capture microdissection versus histologic macrodissection BMC Med. Genomics 2011, 4, 48
    • (2011) BMC Med. Genomics , vol.4 , pp. 48
    • Kim, H.K.1    Kim, J.2    Korolevich, S.3    Choi, I.J.4    Kim, C.H.5    Munroe, D.J.6    Green, J.E.7
  • 30
    • 1642314100 scopus 로고    scopus 로고
    • CD9 expression in gastric cancer and its significance
    • Hori, H.; Yano, S.; Koufuji, K.; Takeda, J.; Shirouzu, K. CD9 expression in gastric cancer and its significance J. Surg. Res. 2004, 117 (2) 208-15
    • (2004) J. Surg. Res. , vol.117 , Issue.2 , pp. 208-215
    • Hori, H.1    Yano, S.2    Koufuji, K.3    Takeda, J.4    Shirouzu, K.5
  • 31
    • 77956011418 scopus 로고    scopus 로고
    • Prognostic significance of CD9 expression in locally advanced gastric cancer treated with surgery and adjuvant chemoradiotherapy
    • Soyuer, S.; Soyuer, I.; Unal, D.; Ucar, K.; Yildiz, O. G.; Orhan, O. Prognostic significance of CD9 expression in locally advanced gastric cancer treated with surgery and adjuvant chemoradiotherapy Pathol. Res. Pract. 2010, 206 (9) 607-10
    • (2010) Pathol. Res. Pract. , vol.206 , Issue.9 , pp. 607-610
    • Soyuer, S.1    Soyuer, I.2    Unal, D.3    Ucar, K.4    Yildiz, O.G.5    Orhan, O.6
  • 36
    • 0033061766 scopus 로고    scopus 로고
    • Expression and regulation by interferon-gamma of the membrane-bound complement regulators CD46 (MCP), CD55 (DAF) and CD59 in gastrointestinal tumours
    • Schmitt, C. A.; Schwaeble, W.; Wittig, B. M.; Meyer zum Buschenfelde, K. H.; Dippold, W. G. Expression and regulation by interferon-gamma of the membrane-bound complement regulators CD46 (MCP), CD55 (DAF) and CD59 in gastrointestinal tumours Eur. J. Cancer 1999, 35 (1) 117-24
    • (1999) Eur. J. Cancer , vol.35 , Issue.1 , pp. 117-124
    • Schmitt, C.A.1    Schwaeble, W.2    Wittig, B.M.3    Meyer Zum Buschenfelde, K.H.4    Dippold, W.G.5
  • 38
    • 84868002881 scopus 로고    scopus 로고
    • Overexpression of EphA2 correlates with epithelial-mesenchymal transition-related proteins in gastric cancer and their prognostic importance for postoperative patients
    • 10.1007/s12032-011-0127-2
    • Hou, F.; Yuan, W.; Huang, J.; Qian, L.; Chen, Z.; Ge, J.; Wu, S.; Chen, J.; Wang, J. Overexpression of EphA2 correlates with epithelial-mesenchymal transition-related proteins in gastric cancer and their prognostic importance for postoperative patients Med. Oncol. 2011, 10.1007/s12032-011-0127-2
    • (2011) Med. Oncol.
    • Hou, F.1    Yuan, W.2    Huang, J.3    Qian, L.4    Chen, Z.5    Ge, J.6    Wu, S.7    Chen, J.8    Wang, J.9
  • 39
    • 42049120475 scopus 로고    scopus 로고
    • FGFR2-amplified gastric cancer cell lines require FGFR2 and Erbb3 signaling for growth and survival
    • Kunii, K.; Davis, L.; Gorenstein, J.; Hatch, H.; Yashiro, M.; Di Bacco, A.; Elbi, C.; Lutterbach, B. FGFR2-amplified gastric cancer cell lines require FGFR2 and Erbb3 signaling for growth and survival Cancer Res. 2008, 68 (7) 2340-8
    • (2008) Cancer Res. , vol.68 , Issue.7 , pp. 2340-2348
    • Kunii, K.1    Davis, L.2    Gorenstein, J.3    Hatch, H.4    Yashiro, M.5    Di Bacco, A.6    Elbi, C.7    Lutterbach, B.8
  • 40
    • 78650076613 scopus 로고    scopus 로고
    • Quantitative proteomics discloses MET expression in mitochondria as a direct target of MET kinase inhibitor in cancer cells
    • Guo, T.; Zhu, Y.; Gan, C. S.; Lee, S. S.; Zhu, J.; Wang, H.; Li, X.; Christensen, J.; Huang, S.; Kon, O. L.; Sze, S. K. Quantitative proteomics discloses MET expression in mitochondria as a direct target of MET kinase inhibitor in cancer cells Mol. Cell. Proteomics 2010, 9 (12) 2629-41
    • (2010) Mol. Cell. Proteomics , vol.9 , Issue.12 , pp. 2629-2641
    • Guo, T.1    Zhu, Y.2    Gan, C.S.3    Lee, S.S.4    Zhu, J.5    Wang, H.6    Li, X.7    Christensen, J.8    Huang, S.9    Kon, O.L.10    Sze, S.K.11
  • 42
    • 77952903266 scopus 로고    scopus 로고
    • Helicobacter pylori: Gastric cancer and beyond
    • Polk, D. B.; Peek, R. M., Jr. Helicobacter pylori: gastric cancer and beyond Nat. Rev. Cancer 2010, 10 (6) 403-14
    • (2010) Nat. Rev. Cancer , vol.10 , Issue.6 , pp. 403-414
    • Polk, D.B.1    Peek Jr., R.M.2
  • 43
    • 0344197110 scopus 로고    scopus 로고
    • Meta-analysis of the relationship between cagA seropositivity and gastric cancer
    • Huang, J. Q.; Zheng, G. F.; Sumanac, K.; Irvine, E. J.; Hunt, R. H. Meta-analysis of the relationship between cagA seropositivity and gastric cancer Gastroenterology 2003, 125 (6) 1636-44
    • (2003) Gastroenterology , vol.125 , Issue.6 , pp. 1636-1644
    • Huang, J.Q.1    Zheng, G.F.2    Sumanac, K.3    Irvine, E.J.4    Hunt, R.H.5
  • 44
  • 45
    • 17644371049 scopus 로고    scopus 로고
    • Helicobacter pylori binds to CD74 on gastric epithelial cells and stimulates interleukin-8 production
    • Beswick, E. J.; Bland, D. A.; Suarez, G.; Barrera, C. A.; Fan, X.; Reyes, V. E. Helicobacter pylori binds to CD74 on gastric epithelial cells and stimulates interleukin-8 production Infect. Immun. 2005, 73 (5) 2736-43
    • (2005) Infect. Immun. , vol.73 , Issue.5 , pp. 2736-2743
    • Beswick, E.J.1    Bland, D.A.2    Suarez, G.3    Barrera, C.A.4    Fan, X.5    Reyes, V.E.6
  • 46
    • 44449151030 scopus 로고    scopus 로고
    • Drug development of MET inhibitors: Targeting oncogene addiction and expedience
    • Comoglio, P. M.; Giordano, S.; Trusolino, L. Drug development of MET inhibitors: targeting oncogene addiction and expedience Nat. Rev. Drug Discovery 2008, 7 (6) 504-16
    • (2008) Nat. Rev. Drug Discovery , vol.7 , Issue.6 , pp. 504-516
    • Comoglio, P.M.1    Giordano, S.2    Trusolino, L.3
  • 47
    • 79959713140 scopus 로고    scopus 로고
    • Fibroblast growth factors and their receptors in cancer
    • Wesche, J.; Haglund, K.; Haugsten, E. M. Fibroblast growth factors and their receptors in cancer Biochem. J. 2011, 437 (2) 199-213
    • (2011) Biochem. J. , vol.437 , Issue.2 , pp. 199-213
    • Wesche, J.1    Haglund, K.2    Haugsten, E.M.3
  • 48
    • 84857439435 scopus 로고    scopus 로고
    • EphA receptor signaling - Complexity and emerging themes
    • Miao, H.; Wang, B. EphA receptor signaling - complexity and emerging themes Semin. Cell Dev. Biol. 2012, 23 (1) 16-25
    • (2012) Semin. Cell Dev. Biol. , vol.23 , Issue.1 , pp. 16-25
    • Miao, H.1    Wang, B.2


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