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Volumn 24, Issue 2, 2012, Pages 236-244

High-throughput approaches for the analysis of extrinsic regulators of stem cell fate

Author keywords

[No Author keywords available]

Indexed keywords

CELL FATE; EXPERIMENTAL DESIGN; HIGH THROUGHPUT SCREENING; HUMAN; INFORMATION PROCESSING; MEDICAL TECHNOLOGY; NONHUMAN; PRIORITY JOURNAL; REGULATORY MECHANISM; REVIEW; SIGNAL TRANSDUCTION; STEM CELL; SYSTEMS BIOLOGY;

EID: 84861823100     PISSN: 09550674     EISSN: 18790410     Source Type: Journal    
DOI: 10.1016/j.ceb.2012.01.006     Document Type: Review
Times cited : (54)

References (53)
  • 1
    • 39149144034 scopus 로고    scopus 로고
    • Stem cells and niches: mechanisms that promote stem cell maintenance throughout life
    • Morrison S.J., Spradling A.C. Stem cells and niches: mechanisms that promote stem cell maintenance throughout life. Cell 2008, 132:598-611.
    • (2008) Cell , vol.132 , pp. 598-611
    • Morrison, S.J.1    Spradling, A.C.2
  • 2
    • 70849130059 scopus 로고    scopus 로고
    • Designing materials to direct stem-cell fate
    • Lutolf M.P., Gilbert P.M., Blau H.M. Designing materials to direct stem-cell fate. Nature 2009, 462:433-441.
    • (2009) Nature , vol.462 , pp. 433-441
    • Lutolf, M.P.1    Gilbert, P.M.2    Blau, H.M.3
  • 3
    • 67649920749 scopus 로고    scopus 로고
    • Growth factors, matrices, and forces combine and control stem cells
    • Discher D.E., Mooney D.J., Zandstra P.W. Growth factors, matrices, and forces combine and control stem cells. Science (New York, NY) 2009, 324:1673-1677.
    • (2009) Science (New York, NY) , vol.324 , pp. 1673-1677
    • Discher, D.E.1    Mooney, D.J.2    Zandstra, P.W.3
  • 5
    • 65549112285 scopus 로고    scopus 로고
    • High-throughput cellular microarray platforms: applications in drug discovery, toxicology and stem cell research
    • Fernandes T.G., Diogo M.M., Clark D.S., Dordick J.S., Cabral J.M.S. High-throughput cellular microarray platforms: applications in drug discovery, toxicology and stem cell research. Trends Biotechnol 2009, 27:342-349.
    • (2009) Trends Biotechnol , vol.27 , pp. 342-349
    • Fernandes, T.G.1    Diogo, M.M.2    Clark, D.S.3    Dordick, J.S.4    Cabral, J.M.S.5
  • 6
    • 18744376054 scopus 로고    scopus 로고
    • An extracellular matrix microarray for probing cellular differentiation
    • Flaim C.J., Chien S., Bhatia S.N. An extracellular matrix microarray for probing cellular differentiation. Nat Methods 2005, 2:119-125.
    • (2005) Nat Methods , vol.2 , pp. 119-125
    • Flaim, C.J.1    Chien, S.2    Bhatia, S.N.3
  • 7
    • 33846045536 scopus 로고    scopus 로고
    • Exploring the regulation of human neural precursor cell differentiation using arrays of signaling microenvironments
    • Soen Y., Mori A., Palmer T.D., Brown P.O. Exploring the regulation of human neural precursor cell differentiation using arrays of signaling microenvironments. Mol Syst Biol 2006, 2.
    • (2006) Mol Syst Biol , pp. 2
    • Soen, Y.1    Mori, A.2    Palmer, T.D.3    Brown, P.O.4
  • 11
    • 80155205233 scopus 로고    scopus 로고
    • Artificial niche microarrays for probing single stem cell fate in high throughput
    • Gobaa S., Hoehnel S., Roccio M., Negro A., Kobel S., Lutolf M.P. Artificial niche microarrays for probing single stem cell fate in high throughput. Nat Methods 2011, 8:949-955.
    • (2011) Nat Methods , vol.8 , pp. 949-955
    • Gobaa, S.1    Hoehnel, S.2    Roccio, M.3    Negro, A.4    Kobel, S.5    Lutolf, M.P.6
  • 14
    • 69649103201 scopus 로고    scopus 로고
    • Microarrays of over 2000 hydrogels-identification of substrates for cellular trapping and thermally triggered release
    • Zhang R., Liberski A., Sanchez-Martin R., Bradley M. Microarrays of over 2000 hydrogels-identification of substrates for cellular trapping and thermally triggered release. Biomaterials 2009, 30:6193-6201.
    • (2009) Biomaterials , vol.30 , pp. 6193-6201
    • Zhang, R.1    Liberski, A.2    Sanchez-Martin, R.3    Bradley, M.4
  • 15
    • 79954433708 scopus 로고    scopus 로고
    • A software-programmable microfluidic device for automated biology
    • Fidalgo L.M., Maerkl S.J. A software-programmable microfluidic device for automated biology. Lab Chip 2011, 11:1612-1619.
    • (2011) Lab Chip , vol.11 , pp. 1612-1619
    • Fidalgo, L.M.1    Maerkl, S.J.2
  • 16
    • 79955612530 scopus 로고    scopus 로고
    • A parallel microfluidic flow cytometer for high-content screening
    • McKenna B.K., Evans J.G., Cheung M.C., Ehrlich D.J. A parallel microfluidic flow cytometer for high-content screening. Nat Methods 2011, 8:401-403.
    • (2011) Nat Methods , vol.8 , pp. 401-403
    • McKenna, B.K.1    Evans, J.G.2    Cheung, M.C.3    Ehrlich, D.J.4
  • 19
    • 34547931078 scopus 로고    scopus 로고
    • Modeling tissue morphogenesis and cancer in 3D
    • Yamada K.M., Cukierman E. Modeling tissue morphogenesis and cancer in 3D. Cell 2007, 130:601-610.
    • (2007) Cell , vol.130 , pp. 601-610
    • Yamada, K.M.1    Cukierman, E.2
  • 21
    • 80052294065 scopus 로고    scopus 로고
    • Three-dimensional biomaterials for the study of human pluripotent stem cells
    • Kraehenbuehl T.P., Langer R., Ferreira L.S. Three-dimensional biomaterials for the study of human pluripotent stem cells. Nat Methods 2011, 8:731-736.
    • (2011) Nat Methods , vol.8 , pp. 731-736
    • Kraehenbuehl, T.P.1    Langer, R.2    Ferreira, L.S.3
  • 24
    • 79551649124 scopus 로고    scopus 로고
    • A three-dimensional in vitro ovarian cancer coculture model using a high-throughput cell patterning platform
    • Xu F., Celli J., Rizvi I., Moon S., Hasan T., Demirci U. A three-dimensional in vitro ovarian cancer coculture model using a high-throughput cell patterning platform. Biotechnol J 2011, 6:204-212.
    • (2011) Biotechnol J , vol.6 , pp. 204-212
    • Xu, F.1    Celli, J.2    Rizvi, I.3    Moon, S.4    Hasan, T.5    Demirci, U.6
  • 25
    • 78650271558 scopus 로고    scopus 로고
    • High-throughput generation of hydrogel microbeads with varying elasticity for cell encapsulation
    • Kumachev A., Greener J., Tumarkin E., Eiser E., Zandstra P.W., Kumacheva E. High-throughput generation of hydrogel microbeads with varying elasticity for cell encapsulation. Biomaterials 2011, 32:1477-1483.
    • (2011) Biomaterials , vol.32 , pp. 1477-1483
    • Kumachev, A.1    Greener, J.2    Tumarkin, E.3    Eiser, E.4    Zandstra, P.W.5    Kumacheva, E.6
  • 27
    • 77957947156 scopus 로고    scopus 로고
    • Multiplexed, high-throughput analysis of 3D microtissue suspensions
    • Chen A.A., Underhill G.H., Bhatia S.N. Multiplexed, high-throughput analysis of 3D microtissue suspensions. Integr Biol (Camb) 2010, 2:517-527.
    • (2010) Integr Biol (Camb) , vol.2 , pp. 517-527
    • Chen, A.A.1    Underhill, G.H.2    Bhatia, S.N.3
  • 28
    • 77949313182 scopus 로고    scopus 로고
    • Integration column: artificial ECM: expanding the cell biology toolbox in 3D
    • Lutolf M.P. Integration column: artificial ECM: expanding the cell biology toolbox in 3D. Integr Biol 2009, 1:235-241.
    • (2009) Integr Biol , vol.1 , pp. 235-241
    • Lutolf, M.P.1
  • 29
    • 80053358661 scopus 로고    scopus 로고
    • Optical sectioning microscopy with planar or structured illumination
    • Mertz J. Optical sectioning microscopy with planar or structured illumination. Nat Methods 2011, 8:811-819.
    • (2011) Nat Methods , vol.8 , pp. 811-819
    • Mertz, J.1
  • 30
    • 64249113913 scopus 로고    scopus 로고
    • Photodegradable hydrogels for dynamic tuning of physical and chemical properties
    • Kloxin A.M., Kasko A.M., Salinas C.N., Anseth K.S. Photodegradable hydrogels for dynamic tuning of physical and chemical properties. Science 2009, 324:59-63.
    • (2009) Science , vol.324 , pp. 59-63
    • Kloxin, A.M.1    Kasko, A.M.2    Salinas, C.N.3    Anseth, K.S.4
  • 31
    • 77956185209 scopus 로고    scopus 로고
    • Patterning network structure to spatially control cellular remodeling and stem cell fate within 3-dimensional hydrogels
    • Khetan S., Burdick J.A. Patterning network structure to spatially control cellular remodeling and stem cell fate within 3-dimensional hydrogels. Biomaterials 2010, 31:8228-8234.
    • (2010) Biomaterials , vol.31 , pp. 8228-8234
    • Khetan, S.1    Burdick, J.A.2
  • 33
    • 80053052185 scopus 로고    scopus 로고
    • Spatially controlled simultaneous patterning of multiple growth factors in three-dimensional hydrogels
    • Wylie R.G., Ahsan S., Aizawa Y., Maxwell K.L., Morshead C.M., Shoichet M.S. Spatially controlled simultaneous patterning of multiple growth factors in three-dimensional hydrogels. Nat Mater 2011, 10:799-806.
    • (2011) Nat Mater , vol.10 , pp. 799-806
    • Wylie, R.G.1    Ahsan, S.2    Aizawa, Y.3    Maxwell, K.L.4    Morshead, C.M.5    Shoichet, M.S.6
  • 35
    • 77950863994 scopus 로고    scopus 로고
    • Lentiviral gene ontology (LeGO) vectors equipped with novel drug-selectable fluorescent proteins: new building blocks for cell marking and multi-gene analysis
    • Weber K., Mock U., Petrowitz B., Bartsch U., Fehse B. Lentiviral gene ontology (LeGO) vectors equipped with novel drug-selectable fluorescent proteins: new building blocks for cell marking and multi-gene analysis. Gene Ther 2010, 17:511-520.
    • (2010) Gene Ther , vol.17 , pp. 511-520
    • Weber, K.1    Mock, U.2    Petrowitz, B.3    Bartsch, U.4    Fehse, B.5
  • 37
    • 80054738615 scopus 로고    scopus 로고
    • The ePetri dish, an on-chip cell imaging platform based on subpixel perspective sweeping microscopy (SPSM)
    • Zheng G., Lee S.A., Antebi Y., Elowitz M.B., Yang C. The ePetri dish, an on-chip cell imaging platform based on subpixel perspective sweeping microscopy (SPSM). Proc Natl Acad Sci U S A 2011, 108:16889-16894.
    • (2011) Proc Natl Acad Sci U S A , vol.108 , pp. 16889-16894
    • Zheng, G.1    Lee, S.A.2    Antebi, Y.3    Elowitz, M.B.4    Yang, C.5
  • 38
    • 58149215784 scopus 로고    scopus 로고
    • High-throughput screening: designer screens
    • Blow N. High-throughput screening: designer screens. Nat Methods 2009, 6:105-108.
    • (2009) Nat Methods , vol.6 , pp. 105-108
    • Blow, N.1
  • 39
    • 79958164228 scopus 로고    scopus 로고
    • Optimization of in vitro erythropoiesis from CD34(+) cord blood cells using design of experiments (DOE)
    • Lim M., Panoskaltsis N., Ye H., Mantalaris A. Optimization of in vitro erythropoiesis from CD34(+) cord blood cells using design of experiments (DOE). Biochem Eng J 2011, 55:154-161.
    • (2011) Biochem Eng J , vol.55 , pp. 154-161
    • Lim, M.1    Panoskaltsis, N.2    Ye, H.3    Mantalaris, A.4
  • 42
    • 74449085977 scopus 로고    scopus 로고
    • Integration of statistical modeling and high-content microscopy to systematically investigate cell-substrate interactions
    • Chen W.L., Likhitpanichkul M., Ho A., Simmons C.A. Integration of statistical modeling and high-content microscopy to systematically investigate cell-substrate interactions. Biomaterials 2010, 31:2489-2497.
    • (2010) Biomaterials , vol.31 , pp. 2489-2497
    • Chen, W.L.1    Likhitpanichkul, M.2    Ho, A.3    Simmons, C.A.4
  • 44
    • 0033729744 scopus 로고    scopus 로고
    • Chromosome identification using hidden Markov models: comparison with neural networks, singular value decomposition, principal components analysis, and Fisher discriminant analysis
    • Conroy J.M., Kolda T.G., O'Leary D.P., O'Leary T.J. Chromosome identification using hidden Markov models: comparison with neural networks, singular value decomposition, principal components analysis, and Fisher discriminant analysis. Lab Invest 2000, 80:1629-1641.
    • (2000) Lab Invest , vol.80 , pp. 1629-1641
    • Conroy, J.M.1    Kolda, T.G.2    O'Leary, D.P.3    O'Leary, T.J.4
  • 45
    • 68149087810 scopus 로고    scopus 로고
    • Manipulation of signaling thresholds in 'engineered stem cell niches' identifies design criteria for pluripotent stem cell screens
    • Peerani R., Onishi K., Mahdavi A., Kumacheva E., Zandstra P.W. Manipulation of signaling thresholds in 'engineered stem cell niches' identifies design criteria for pluripotent stem cell screens. PLoS ONE 2009, 4:e6438.
    • (2009) PLoS ONE , vol.4
    • Peerani, R.1    Onishi, K.2    Mahdavi, A.3    Kumacheva, E.4    Zandstra, P.W.5
  • 46
    • 1542327692 scopus 로고    scopus 로고
    • Multivariate proteomic analysis of murine embryonic stem cell self-renewal versus differentiation signaling
    • Prudhomme W., Daley G.Q., Zandstra P., Lauffenburger D.A. Multivariate proteomic analysis of murine embryonic stem cell self-renewal versus differentiation signaling. Proc Natl Acad Sci U S A 2004, 101:2900-2905.
    • (2004) Proc Natl Acad Sci U S A , vol.101 , pp. 2900-2905
    • Prudhomme, W.1    Daley, G.Q.2    Zandstra, P.3    Lauffenburger, D.A.4
  • 47
    • 80054076272 scopus 로고    scopus 로고
    • The influence of scaffold elasticity on germ layer specification of human embryonic stem cells
    • Zoldan J., Karagiannis E.D., Lee C.Y., Anderson D.G., Langer R., Levenberg S. The influence of scaffold elasticity on germ layer specification of human embryonic stem cells. Biomaterials 2011, 32:9612-9621.
    • (2011) Biomaterials , vol.32 , pp. 9612-9621
    • Zoldan, J.1    Karagiannis, E.D.2    Lee, C.Y.3    Anderson, D.G.4    Langer, R.5    Levenberg, S.6
  • 49
    • 77649263847 scopus 로고    scopus 로고
    • Computational prediction of neural progenitor cell fates
    • Cohen A.R., Gomes F.L., Roysam B., Cayouette M. Computational prediction of neural progenitor cell fates. Nat Methods 2010, 7:213-218.
    • (2010) Nat Methods , vol.7 , pp. 213-218
    • Cohen, A.R.1    Gomes, F.L.2    Roysam, B.3    Cayouette, M.4
  • 51
    • 79953701610 scopus 로고    scopus 로고
    • Towards a quantitative understanding of stem cell-niche interaction: experiments, models, and technologies
    • Roeder I., Loeffler M., Glauche I. Towards a quantitative understanding of stem cell-niche interaction: experiments, models, and technologies. Blood Cells Mol Dis 2011, 46:308-317.
    • (2011) Blood Cells Mol Dis , vol.46 , pp. 308-317
    • Roeder, I.1    Loeffler, M.2    Glauche, I.3
  • 52
  • 53
    • 0038730860 scopus 로고    scopus 로고
    • On the complete determination of biological systems
    • Selinger D.W., Wright M.A., Church G.M. On the complete determination of biological systems. Trends Biotechnol 2003, 21:251-254.
    • (2003) Trends Biotechnol , vol.21 , pp. 251-254
    • Selinger, D.W.1    Wright, M.A.2    Church, G.M.3


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