메뉴 건너뛰기




Volumn 116, Issue 6, 2012, Pages 692-705

Molecular systematics in the genus Mucor with special regards to species encountered in cheese

Author keywords

Cheese; Morphology; Mucor; Multilocus phylogeny; Phylogenetic species

Indexed keywords

FUNGAL DNA; FUNGAL PROTEIN; FUNGAL RNA; RIBOSOMAL SPACER DNA; RIBOSOME DNA; RNA 18S; RNA 28S;

EID: 84861676308     PISSN: 18786146     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.funbio.2012.04.002     Document Type: Article
Times cited : (60)

References (75)
  • 3
    • 0000124211 scopus 로고
    • Molecular phylogeny of northern hemisphere species of Armillaria
    • Anderson J.B., Stasovski E. Molecular phylogeny of northern hemisphere species of Armillaria. Mycologia 1992, 84:505-516.
    • (1992) Mycologia , vol.84 , pp. 505-516
    • Anderson, J.B.1    Stasovski, E.2
  • 6
    • 0024245591 scopus 로고
    • Mycoflora of air-conditioners dust from Riyadh, Saudi Arabia
    • Bagy M.M., Gohar Y.M. Mycoflora of air-conditioners dust from Riyadh, Saudi Arabia. Journal of Basic Microbiology 1988, 28:571-577.
    • (1988) Journal of Basic Microbiology , vol.28 , pp. 571-577
    • Bagy, M.M.1    Gohar, Y.M.2
  • 8
    • 0001354761 scopus 로고
    • Evolution of the surface fungal flora of Reblochon cheese
    • Bärtschi C., Berthier J. Evolution of the surface fungal flora of Reblochon cheese. Le Lait 1994, 74:105-114.
    • (1994) Le Lait , vol.74 , pp. 105-114
    • Bärtschi, C.1    Berthier, J.2
  • 9
    • 0029294097 scopus 로고
    • Fungi inhabiting household environments in Riyadh, Saudi Arabia
    • Bokhary H.A., Parvez S. Fungi inhabiting household environments in Riyadh, Saudi Arabia. Mycopathologia 1995, 130:79-87.
    • (1995) Mycopathologia , vol.130 , pp. 79-87
    • Bokhary, H.A.1    Parvez, S.2
  • 10
    • 77951848832 scopus 로고    scopus 로고
    • Taxonomic position of Mucor hiemalis f. luteus
    • Budziszewska J., Piatkowska J. Taxonomic position of Mucor hiemalis f. luteus. Mycotaxon 2010, 111:75-85.
    • (2010) Mycotaxon , vol.111 , pp. 75-85
    • Budziszewska, J.1    Piatkowska, J.2
  • 11
    • 0001566870 scopus 로고
    • Ribosomal DNA sequence divergence within internal transcribed spacer 1 of the Sclerotiniaceae
    • Carbone I., Kohn L.M. Ribosomal DNA sequence divergence within internal transcribed spacer 1 of the Sclerotiniaceae. Mycologia 1993, 85:415-427.
    • (1993) Mycologia , vol.85 , pp. 415-427
    • Carbone, I.1    Kohn, L.M.2
  • 14
  • 15
    • 0344863884 scopus 로고    scopus 로고
    • A multilocus genealogical approach to phylogenetic species recognition in the model eukaryote Neurospora
    • Dettman J.R., Jacobson D.J., Taylor J.W. A multilocus genealogical approach to phylogenetic species recognition in the model eukaryote Neurospora. Evolution 2003, 57:2703-2720.
    • (2003) Evolution , vol.57 , pp. 2703-2720
    • Dettman, J.R.1    Jacobson, D.J.2    Taylor, J.W.3
  • 16
    • 38249038161 scopus 로고
    • Sexual reproduction: nuclear cycles and life-histories with particular reference to lower eukaryotes
    • Dick M. Sexual reproduction: nuclear cycles and life-histories with particular reference to lower eukaryotes. Biological Journal of the Linnean Society 1987, 30:181-192.
    • (1987) Biological Journal of the Linnean Society , vol.30 , pp. 181-192
    • Dick, M.1
  • 18
    • 0342599896 scopus 로고
    • Tropical soil fungi
    • Farrow W. Tropical soil fungi. Mycologia 1954, 46:632-646.
    • (1954) Mycologia , vol.46 , pp. 632-646
    • Farrow, W.1
  • 19
    • 33645182943 scopus 로고
    • Microbial contaminants cause swelling and inward collapse of yoghurt packs
    • Foschino R., Garzaroli C. Microbial contaminants cause swelling and inward collapse of yoghurt packs. Le Lait 1993, 73:395-400.
    • (1993) Le Lait , vol.73 , pp. 395-400
    • Foschino, R.1    Garzaroli, C.2
  • 21
    • 0034844836 scopus 로고    scopus 로고
    • Bms1p, a novel GTP-binding protein, and the related Tsr1p are required for distinct steps of 40S ribosome biogenesis in yeast
    • Gelperin D., Horton L., Beckman J., Hensold J., Lemmon S.K. Bms1p, a novel GTP-binding protein, and the related Tsr1p are required for distinct steps of 40S ribosome biogenesis in yeast. RNA 2001, 7:1268-1283.
    • (2001) RNA , vol.7 , pp. 1268-1283
    • Gelperin, D.1    Horton, L.2    Beckman, J.3    Hensold, J.4    Lemmon, S.K.5
  • 22
    • 44649148440 scopus 로고    scopus 로고
    • Assignment of species rank to six reproductively isolated cryptic species of the Phialocephala fortinii s.1.-Acephala applanata species complex
    • Grünig C.R., Duò A., Sieber T.N., Holdenrieder O. Assignment of species rank to six reproductively isolated cryptic species of the Phialocephala fortinii s.1.-Acephala applanata species complex. Mycologia 2008, 100:47-67.
    • (2008) Mycologia , vol.100 , pp. 47-67
    • Grünig, C.R.1    Duò, A.2    Sieber, T.N.3    Holdenrieder, O.4
  • 24
    • 0020671472 scopus 로고
    • Microbiology of oriental fermented foods
    • Hesseltine C. Microbiology of oriental fermented foods. Annual Reviews in Microbiology 1983, 37:575-601.
    • (1983) Annual Reviews in Microbiology , vol.37 , pp. 575-601
    • Hesseltine, C.1
  • 27
    • 65149103911 scopus 로고    scopus 로고
    • Detection of 3-nitropropionic acid and cytotoxicity in Mucor circinelloides
    • Hollmann M., Razzazi-Fazeli E., Grajewski J. Detection of 3-nitropropionic acid and cytotoxicity in Mucor circinelloides. Mycotoxin Research 2008, 24:140-150.
    • (2008) Mycotoxin Research , vol.24 , pp. 140-150
    • Hollmann, M.1    Razzazi-Fazeli, E.2    Grajewski, J.3
  • 28
    • 0017164725 scopus 로고
    • Enhancement of cheese flavors with microbial esterases
    • Huang H. Enhancement of cheese flavors with microbial esterases. Biotechnology and Bioengineering 1976, 18:909-919.
    • (1976) Biotechnology and Bioengineering , vol.18 , pp. 909-919
    • Huang, H.1
  • 29
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck J.P., Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 2001, 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 30
    • 34548017450 scopus 로고    scopus 로고
    • Species boundaries within Saprolegnia (Saprolegniales, Oomycota) based on morphological and DNA sequence data
    • Hulvey J.P., Padgett D.E., Bailey J.C. Species boundaries within Saprolegnia (Saprolegniales, Oomycota) based on morphological and DNA sequence data. Mycologia 2007, 99:421-429.
    • (2007) Mycologia , vol.99 , pp. 421-429
    • Hulvey, J.P.1    Padgett, D.E.2    Bailey, J.C.3
  • 31
    • 38049115135 scopus 로고    scopus 로고
    • Identification of the sex genes in an early diverged fungus
    • Idnurm A., Walton F.J., Floyd A., Heitman J. Identification of the sex genes in an early diverged fungus. Nature 2008, 451:193-196.
    • (2008) Nature , vol.451 , pp. 193-196
    • Idnurm, A.1    Walton, F.J.2    Floyd, A.3    Heitman, J.4
  • 32
    • 47049104023 scopus 로고    scopus 로고
    • Mucor renisporus sp. nov., a new coprophilous species from Southern Africa
    • Jacobs K., Botha A. Mucor renisporus sp. nov., a new coprophilous species from Southern Africa. Fungal Diversity 2008, 29:27-35.
    • (2008) Fungal Diversity , vol.29 , pp. 27-35
    • Jacobs, K.1    Botha, A.2
  • 34
    • 0032537449 scopus 로고    scopus 로고
    • MCM proteins: evolution, properties, and role in DNA replication
    • Kearsey S.E., Labib K. MCM proteins: evolution, properties, and role in DNA replication. Biochimica et Biophysica Acta 1998, 1398:113-136.
    • (1998) Biochimica et Biophysica Acta , vol.1398 , pp. 113-136
    • Kearsey, S.E.1    Labib, K.2
  • 35
    • 0027267908 scopus 로고
    • A common set of conserved motifs in a vast variety of putative nucleic acid-dependent ATPases including MCM proteins involved in the initiation of eukaryotic DNA replication
    • Koonin E. A common set of conserved motifs in a vast variety of putative nucleic acid-dependent ATPases including MCM proteins involved in the initiation of eukaryotic DNA replication. Nucleic Acids Research 1993, 21:2541-2547.
    • (1993) Nucleic Acids Research , vol.21 , pp. 2541-2547
    • Koonin, E.1
  • 37
    • 33745951400 scopus 로고    scopus 로고
    • Phylogenetic relationships among Zygomycetes from soil based on ITS1/2 rDNA sequences
    • Kwasna H., Ward E., Bateman G.L. Phylogenetic relationships among Zygomycetes from soil based on ITS1/2 rDNA sequences. Mycological Research 2006, 110:501-510.
    • (2006) Mycological Research , vol.110 , pp. 501-510
    • Kwasna, H.1    Ward, E.2    Bateman, G.L.3
  • 38
    • 0035502617 scopus 로고    scopus 로고
    • Neolecta: a fungal dinosaur? Evidence from β-tubulin amino acid sequences
    • Landvik S., Eriksson O. Neolecta: a fungal dinosaur? Evidence from β-tubulin amino acid sequences. Mycologia 2001, 93:1151-1163.
    • (2001) Mycologia , vol.93 , pp. 1151-1163
    • Landvik, S.1    Eriksson, O.2
  • 39
    • 0023336956 scopus 로고
    • Expression of three genes for elongation factor 1 alpha during morphogenesis of Mucor racemosus
    • Linz J.E., Sypherd P.S. Expression of three genes for elongation factor 1 alpha during morphogenesis of Mucor racemosus. Molecular and Cellular Biology 1987, 7:1925-1932.
    • (1987) Molecular and Cellular Biology , vol.7 , pp. 1925-1932
    • Linz, J.E.1    Sypherd, P.S.2
  • 41
    • 0034351388 scopus 로고    scopus 로고
    • Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology
    • Lutzoni F., Wagner P., Reeb V., Zoller S. Integrating ambiguously aligned regions of DNA sequences in phylogenetic analyses without violating positional homology. Systematic Biology 2000, 49:628-651.
    • (2000) Systematic Biology , vol.49 , pp. 628-651
    • Lutzoni, F.1    Wagner, P.2    Reeb, V.3    Zoller, S.4
  • 43
    • 0000216233 scopus 로고    scopus 로고
    • A hierarchy of species concepts: the denouement in the saga of the species problem
    • Chapman and Hall, London, M.F. Claridge, H.A. Dawah, M.R. Wilson (Eds.)
    • Mayden R.L. A hierarchy of species concepts: the denouement in the saga of the species problem. Species: the units of biodiversity 1997, 381-424. Chapman and Hall, London. M.F. Claridge, H.A. Dawah, M.R. Wilson (Eds.).
    • (1997) Species: the units of biodiversity , pp. 381-424
    • Mayden, R.L.1
  • 45
    • 6044276713 scopus 로고    scopus 로고
    • Using phylogenetic species recognition to delimit species boundaries within Lasiosphaeria
    • Miller A.N., Huhndorf S.M. Using phylogenetic species recognition to delimit species boundaries within Lasiosphaeria. Mycologia 2004, 96:1106-1127.
    • (2004) Mycologia , vol.96 , pp. 1106-1127
    • Miller, A.N.1    Huhndorf, S.M.2
  • 46
    • 39149141072 scopus 로고    scopus 로고
    • AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics
    • Nylander J.A.A., Wilgenbusch J.C., Warren D.L., Swofford D.L. AWTY (are we there yet?): a system for graphical exploration of MCMC convergence in Bayesian phylogenetics. Bioinformatics 2008, 24:581-583.
    • (2008) Bioinformatics , vol.24 , pp. 581-583
    • Nylander, J.A.A.1    Wilgenbusch, J.C.2    Warren, D.L.3    Swofford, D.L.4
  • 47
    • 0035281057 scopus 로고    scopus 로고
    • Evolutionary relationships among mucoralean fungi (Zygomycota): evidence for family polyphyly on a large scale
    • O'Donnell K., Lutzoni F., Ward T. Evolutionary relationships among mucoralean fungi (Zygomycota): evidence for family polyphyly on a large scale. Mycologia 2001, 93:286-296.
    • (2001) Mycologia , vol.93 , pp. 286-296
    • O'Donnell, K.1    Lutzoni, F.2    Ward, T.3
  • 49
    • 0025303364 scopus 로고
    • Pathogenic fungi in soils of Jabalpur, India
    • Pandey A., Agrawal G.P., Singh S.M. Pathogenic fungi in soils of Jabalpur, India. Mycoses 1990, 33:116-125.
    • (1990) Mycoses , vol.33 , pp. 116-125
    • Pandey, A.1    Agrawal, G.P.2    Singh, S.M.3
  • 50
    • 67349212619 scopus 로고    scopus 로고
    • Multiple gene genealogies and phenotypic data reveal cryptic species of the Botryosphaeriaceae: a case study on the Neofusicoccum parvum/N. ribis complex
    • Pavlic D., Slippers B., Coutinho T.A., Wingfield M.J. Multiple gene genealogies and phenotypic data reveal cryptic species of the Botryosphaeriaceae: a case study on the Neofusicoccum parvum/N. ribis complex. Molecular Phylogenetics and Evolution 2009, 51:259-268.
    • (2009) Molecular Phylogenetics and Evolution , vol.51 , pp. 259-268
    • Pavlic, D.1    Slippers, B.2    Coutinho, T.A.3    Wingfield, M.J.4
  • 51
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • Posada D., Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 1998, 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 52
    • 0032972599 scopus 로고    scopus 로고
    • DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis
    • Rozas J., Rozas R. DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 1999, 15:174-175.
    • (1999) Bioinformatics , vol.15 , pp. 174-175
    • Rozas, J.1    Rozas, R.2
  • 54
    • 34250533445 scopus 로고
    • On Mucor fuscus and its synonyms
    • Schipper M.A.A. On Mucor fuscus and its synonyms. Antonie van Leeuwenhoek 1967, 33:473-476.
    • (1967) Antonie van Leeuwenhoek , vol.33 , pp. 473-476
    • Schipper, M.A.A.1
  • 57
    • 0001774438 scopus 로고
    • On Mucor circinelloides, Mucor racemosus and related species
    • Schipper M.A.A. On Mucor circinelloides, Mucor racemosus and related species. Studies in Mycology 1976, 12:1-40.
    • (1976) Studies in Mycology , vol.12 , pp. 1-40
    • Schipper, M.A.A.1
  • 58
    • 0001779042 scopus 로고
    • On certain species of Mucor with a key to all accepted species
    • Schipper M.A.A. On certain species of Mucor with a key to all accepted species. Studies in Mycology 1978, 17:1-52.
    • (1978) Studies in Mycology , vol.17 , pp. 1-52
    • Schipper, M.A.A.1
  • 61
    • 0023650314 scopus 로고
    • Sequence analysis of the EF-lα gene family of Mucor racemosus
    • Sundstrom P., Lira L., Linz J.E., et al. Sequence analysis of the EF-lα gene family of Mucor racemosus. Nucleic Acids Research 1987, 15:9997-10006.
    • (1987) Nucleic Acids Research , vol.15 , pp. 9997-10006
    • Sundstrom, P.1    Lira, L.2    Linz, J.E.3
  • 63
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Molecular Biology and Evolution 2007, 24:1596-1599.
    • (2007) Molecular Biology and Evolution , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 64
    • 0842331071 scopus 로고    scopus 로고
    • Molecular phylogeny of Zygomycota based on EF-lα and RPB1 sequences: limitations and utility of alternative markers to rDNA
    • Tanabe Y., Saikawa M., Watanabe M. Molecular phylogeny of Zygomycota based on EF-lα and RPB1 sequences: limitations and utility of alternative markers to rDNA. Molecular Phylogenetics and Evolution 2004, 30:438-449.
    • (2004) Molecular Phylogenetics and Evolution , vol.30 , pp. 438-449
    • Tanabe, Y.1    Saikawa, M.2    Watanabe, M.3
  • 65
    • 29144522313 scopus 로고    scopus 로고
    • Evolutionary relationships among basal fungi (Chytridiomycota and Zygomycota): insights from molecular phylogenetics
    • Tanabe Y., Watanabe M.M., Sugiyama J. Evolutionary relationships among basal fungi (Chytridiomycota and Zygomycota): insights from molecular phylogenetics. The Journal of General and Applied Microbiology 2005, 51:267-276.
    • (2005) The Journal of General and Applied Microbiology , vol.51 , pp. 267-276
    • Tanabe, Y.1    Watanabe, M.M.2    Sugiyama, J.3
  • 69
    • 0032699676 scopus 로고    scopus 로고
    • Phylogeny and PCR identification of clinically important Zygomycetes based on nuclear ribosomal-DNA sequence data
    • Voigt K., Cigelnik E., O'Donnell K. Phylogeny and PCR identification of clinically important Zygomycetes based on nuclear ribosomal-DNA sequence data. Journal of Clinical Microbiology 1999, 37:3957-3964.
    • (1999) Journal of Clinical Microbiology , vol.37 , pp. 3957-3964
    • Voigt, K.1    Cigelnik, E.2    O'Donnell, K.3
  • 70
    • 0035972750 scopus 로고    scopus 로고
    • Phylogeny and origin of 82 zygomycetes from all 54 genera of the Mucorales and Mortierellales based on combined analysis of actin and translation elongation factor EF-lα genes
    • Voigt K., Wöstemeyer J. Phylogeny and origin of 82 zygomycetes from all 54 genera of the Mucorales and Mortierellales based on combined analysis of actin and translation elongation factor EF-lα genes. Gene 2001, 270:113-120.
    • (2001) Gene , vol.270 , pp. 113-120
    • Voigt, K.1    Wöstemeyer, J.2
  • 71
    • 0000432452 scopus 로고
    • Amplification and direct sequencing of fungal ribosomal RNA genes for phylogeneties
    • Academic Press, New York, M.A. Innis, D.H. Gelfand, J.J. Sninsky, J.W. White (Eds.)
    • White T.J., Bruns T., Lee S., Taylor J. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogeneties. PCR Protocols: a guide to methods and applications 1990, 315-322. Academic Press, New York. M.A. Innis, D.H. Gelfand, J.J. Sninsky, J.W. White (Eds.).
    • (1990) PCR Protocols: a guide to methods and applications , pp. 315-322
    • White, T.J.1    Bruns, T.2    Lee, S.3    Taylor, J.4
  • 72
    • 33748609097 scopus 로고    scopus 로고
    • Evolutionary implications of a rRNA-based phylogeny of Harpellales
    • White M.M. Evolutionary implications of a rRNA-based phylogeny of Harpellales. Mycological Research 2006, 110:1011-1024.
    • (2006) Mycological Research , vol.110 , pp. 1011-1024
    • White, M.M.1
  • 73
    • 84959755121 scopus 로고
    • The evolutionary species concept reconsidered
    • Wiley E.O. The evolutionary species concept reconsidered. Systematic Biology 1978, 27:17.
    • (1978) Systematic Biology , vol.27 , pp. 17
    • Wiley, E.O.1
  • 75
    • 0036380821 scopus 로고    scopus 로고
    • Relationships among Botryosphaeria species and associated anamorphic fungi inferred from the analyses of ITS and 5.8 S rDNA sequences
    • Zhou S., Stanosz G.R. Relationships among Botryosphaeria species and associated anamorphic fungi inferred from the analyses of ITS and 5.8 S rDNA sequences. Mycologia 2001, 93:516-527.
    • (2001) Mycologia , vol.93 , pp. 516-527
    • Zhou, S.1    Stanosz, G.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.