The origin of red algae: Implications for plastid evolution

Proceedings of the National Academy of Sciences of the United States of America

Volumn 94, Issue 9, 1997, Pages 4520-4525

  Stiller, John W ^a   Hall, Benjamin D ^a  

^a UNIVERSITY OF WASHINGTON   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; RIBOSOME DNA; RNA POLYMERASE II;

ARTICLE; DNA SEQUENCE; EUKARYOTE; MOLECULAR CLONING; MOLECULAR EVOLUTION; NONHUMAN; PHYLOGENY; PLASTID; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RED ALGA;

ACANTHAMOEBA; ALGAE, GREEN; ALGAE, RED; ANIMALS; CELL NUCLEUS; EVOLUTION; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANTS; PLASTIDS; RNA POLYMERASE II;

EID: 0030984331     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.94.9.4520     Document Type: Article

References (65)

1. Gray, M. W. & Doolittle, W. F. (1982) Microbiol. Rev. 46, 1-42.
2. Delwiche, C. F., Kuhsel, M. & Palmer, J. D. (1995) Mol. Phylogenet. Evol. 4, 110-128.
3. Bhattacharya, D. & Medlin, L. (1995) J. Phycol. 31, 489-498.
4. Reith, M. (1995) Annu. Rev. Plant Physiol. Plant Mol. Biol. 46, 549-575.
5. Nelissen, B., Van de Peer, Y., Wilmotte, A. & De Wachter, R. (1995) Mol. Biol. Evol. 12, 1166-1173.
6. Zhou, Y.-H. & Ragan, M. (1995) Curr. Genet. 28, 324-332.
7. Reith, M. E. & Munholland, J. (1993) Plant Cell 5, 465-475.
8. Ragan, M. A. & Gutell, R. A. (1995) Bot. J. Linn. Soc. 118, 81-105.
9. Palmer, J. D. (1993) Nature (London) 364, 762-763.
10. Kamaishi, T., Hashimoto, T., Nakamura, Y., Nakamura, F., Murata, S., Okada, N., Okamoto, K.-i., Shimizu, M. & Hasegawa, M. (1996) J. Mol. Evol. 42, 257-263.
11. Sogin, M. L., Gunderson, J. H., Elwood, H. J., Alonso, R. A. & Peattie, D. A. (1989) Science 243, 75-77.
12. Baldauf, S. L. & Palmer, J. D. (1993) Proc. Natl. Acad. Sci. USA 90, 11558-11562.
13. Kumar, S. & Rzhetsky, A. (1996) J. Mol. Evol. 42, 183-193.
14. Van de Peer, Y., Rensing, S. A., Maier, U.-G. & De Wachter, R. (1996) Proc. Natl. Acad. Sci. USA 93, 7732-7736.
15. Liaud, M.-F., Valentin, C., Martin, W., Bouget, F.-Y., Kloareg, B. & Cerff, R. (1994) J. Mol. Evol. 38, 319-327.
16. Liaud, M.-F., Brandt, U. & Cerff, R. (1995) Plant Mol. Evol. 28, 313-325.
17. Bouget, F. Y., Kerbourc'h, C., Laiud, M.-F., Loiseaux de Goër, S., Quatrano, R. S., Cerff, R. & Kloareg, B. (1995) Curr. Genet. 28, 164-172.
18. Perraso, R., Baroin, A., Liang, H. Q., Bachellerie, J. P. & Adoutte, A. (1989) Nature (London) 339, 142-144.
19. Jokerst, R. S., Weeks, J. R., Zehring, W. A. & Greenleaf, A. L. (1989) Mol. Gen. Genet. 215, 266-275.
20. Sidow, A. & Thomas, W. K. (1994) Curr. Biol. 4, 596-603.
21. Klenk, H.-P., Zillig, W., Lanzendörfer, M., Brampp, B. & Palm, P. (1995) Arch. Protistenkd. 145, 221-230.
22. Stiller, J. W. & Waaland, J. R. (1993) J. Phycol. 29, 506-517.
23. Higgens, D. G., Bleasby, A. J. & Fuchs, R. (1992) Comput. Appl. Biosci. 8, 189-191.
24. Swofford, D. L. (1993) PAUP (Ill. Natl. Hist. Surv., Champaign, IL), Version 3.1.1.
25. Felsenstein, J. (1989) Cladistics 5, 164-165.
26. Yang, Z. (1995) PAML (Inst. Mol. Evol. Genet., Pennsylvania State University, University Park, PA), Version 1.1.
27. Adachi, J. & Hasagawa, M. (1993) Computer Science Monograph (Institute of Statistical Mathematics, Tokyo), Vol. 27.
28. Felsenstein, J. (1985) Evolution 39, 783-791.
29. Bremer, K. (1988) Evolution 42, 795-803.
30. Kishino, H. & Hasagawa, M. (1989) J. Mol. Evol. 29, 170-179.
31. Felsenstein, J. (1985) Syst. Zool. 34, 152-161.
32. Evers, R., Hammer, A., Köck, J., Jess, W., Borst, P., Mémet, S. & Cornelissen, C. A. (1989) Cell 56, 585-597.
33. Smith, J. L., Levin, J. R., Ingles, C. J. & Agabian, N. (1989) Cell 56, 815-827.
34. Dietrich, M. A., Prenger, J. P. & Guilfoyle, T. J. (1990) Plant Mol. Biol. 15, 207-223.
35. Nawrath, C., Schell, J. & Koncz, C. (1990) Mol. Gen. Genet. 223, 65-75.
36. Asuma, Y., Yamagishi, M., Ueshima, R. & Ishihama, A. (1991) Nucleic Acids. Res. 19, 461-468.
37. Wainwright, P. O., Hinkle, G., Sogin, M. L. & Stickel, S. K. (1993) Science 260, 340-342.
38. Knoll, A. H. (1992) Science 256, 622-627.
39. Douglas, S. E., Murphy, C. A, Spencer, D. F. & Gray, M. W. (1991) Nature (London) 350, 148-151.
40. Cavalier-Smith, T. & Chao, E. E. (1996) J. Mol. Evol. 43, 551-562.
41. Hinkle, G., Leipe, D. D., Nerad, T. A. & Sogin, M. L. (1994) Nucleic Acids Res. 22, 465-469.
42. Li, W.-B., Bzik, D. J., Gu, H., Tanaka, M., Fox, B. A. & Inselburg, J. (1989) Nucleic Acids Res. 17, 9621-9636.
43. Bui, E. T. N., Bradley, P. J. & Johnson, P. J. (1996) Proc. Natl. Acad. Sci. USA 93, 9651-9656.
44. Felsenstein, J. (1981) J. Mol. Evol. 17, 368-376.
45. Nikoh, N., Hayase, N., Iwabe, N., Kuma, K.-i. & Miyata, T. (1994) Mol. Biol. Evol. 11, 762-768.
46. Liscomb, D. L. (1989) in The Hierarchy of Life, eds. Fernholm, B., Bremer, K. & Jörnvall, H. (Elsevier, Amsterdam), pp. 161-178.
47. Takahashi, H., Takano, H., Yokoyama, A., Hara, Y., Kawano, S., Toh, e.-A. & Kuroiwa, T. (1995) Curr. Genet. 28, 484-490.
48. Leblanc, C., Boyen, C., Richard, O., Bonnard, G., Grienenberger, J.-M. & Kloareg, B. (1995) J. Mol. Biol. 250, 484-495.
49. Burger, G., Plante, I., Lonergan, K. & Gray, M. W. (1995) J. Mol. Biol. 245, 522-537.
50. Paquin, B., Laforest, M.-J., Forget, L., Roewer, I., Wang, Z., Longcore, J. & Lang, B. F. (1997) Curr. Gen., in press.
51. Gray, M. W. (1993) Curr. Opin. Genet. Dev. 3, 884-890.
52. Helmchen, T. A., Bhattacharya, D. & Melkonian, M. (1995) J. Mol. Evol. 41, 203-210.
53. Bhattacharya, D., Helmchen, T., Bibeau, C. & Melkonian, M. (1995) Mol. Biol. Evol. 12, 415-420.
54. Bhattacharya, D., Helmchen, T. & Melkonian, M. (1995) J. Eukaryotic Microbiol. 42, 65-69.
55. Schnepf, E. (1993) in Origin of Plastids, ed. Lewin, R. A. (Chapman & Hall, London), pp. 53-76.
56. Loiseaux-de Goër, S. (1994) Prog. Phycol. Res. 10, 137-177.
57. Valentin, K., Cattolico, R. A. & Zetsche, K. (1993) in Origin of Plastids, ed. Lewin, R. A. (Chapman & Hall, London), pp. 193-221.
58. Ahmadjian, N. (1993) The Liehen Symbiosis (Wiley, New York).
59. Rowan, R. & Knowlton, N. (1995) Proc. Natl. Acad. Sci. USA 92, 2850-2853.
60. Johanowicz, D. L. & Hoy, M. A. (1996) Ann. Entomol. Soc. Am. 89, 435-441.
61. Gast, R. J. & Caron, D. A. (1996) Mol. Biol. Evol. 13, 1192-1197.
62. Cavalier-Smith, T. (1993) in Origin of Plastids, ed. Lewin, R. A. (Chapman & Hall, London), pp. 291-348.
63. Gibbs, S. P. (1981) Ann. N.Y. Acad. Sci. 361, 193-207.
64. Whatley, J. M. & Whatley, F. R. (1981) New Phytol. 87, 223-247.
65. Tomas, R. W. & Cox, E. R. (1973) J. Phycol. 9, 304-323.