-
1
-
-
0032749078
-
Intrinsically unstructured proteins: Re-assessing the protein structure-function paradigm
-
Wright, P. E., and, Dyson, H. J., (1999) Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm. J. Mol. Biol. 293, 321-331.
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 321-331
-
-
Wright, P.E.1
Dyson, H.J.2
-
2
-
-
70350340728
-
The role of dynamic conformational ensembles in biomolecular recognition
-
Boehr, D. D., Nussinov, R., and, Wright, P. E., (2009) The role of dynamic conformational ensembles in biomolecular recognition. Nat. Chem. Biol. 5, 789-796.
-
(2009)
Nat. Chem. Biol.
, vol.5
, pp. 789-796
-
-
Boehr, D.D.1
Nussinov, R.2
Wright, P.E.3
-
3
-
-
0031633365
-
Thousands of proteins likely to have long disordered regions
-
Romero, P., Obradovic, Z., Kissinger, C. R., Villafranca, J. E., Garner, E., et al. (1998) Thousands of proteins likely to have long disordered regions. Pac. Symp. Biocomputing. 3, 437-448.
-
(1998)
Pac. Symp. Biocomputing.
, vol.3
, pp. 437-448
-
-
Romero, P.1
Obradovic, Z.2
Kissinger, C.R.3
Villafranca, J.E.4
Garner, E.5
-
4
-
-
1542358787
-
Prediction and functional analysis of native disorder in proteins from the three kingdoms of life
-
Ward, J. J., Sodhi, J. S., McGuffin, L. J., Buxton, B. F., and, Jones, D. T., (2004) Prediction and functional analysis of native disorder in proteins from the three kingdoms of life. J. Mol. Biol. 337, 635-645.
-
(2004)
J. Mol. Biol.
, vol.337
, pp. 635-645
-
-
Ward, J.J.1
Sodhi, J.S.2
McGuffin, L.J.3
Buxton, B.F.4
Jones, D.T.5
-
5
-
-
1842473094
-
P27 binds cyclin-CDK complexes through a sequential mechanism involving binding-induced protein folding
-
Lacy, E. R., Filippov, I., Lewis, W. S., Otieno, S., Xiao, L., et al. (2004) p27 binds cyclin-CDK complexes through a sequential mechanism involving binding-induced protein folding. Nat. Struct. Mol. Biol. 11, 358-364.
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 358-364
-
-
Lacy, E.R.1
Filippov, I.2
Lewis, W.S.3
Otieno, S.4
Xiao, L.5
-
6
-
-
23644449725
-
The intrinsically disordered C-terminal domain of the measles virus nucleoprotein interacts with the C-terminal domain of the phosphoprotein via two distinct sites and remains predominantly unfolded
-
Bourhis, J. M., Receveur-Brechot, V., Oglesbee, M., Zhang, X., Buccellato, M., et al. (2005) The intrinsically disordered C-terminal domain of the measles virus nucleoprotein interacts with the C-terminal domain of the phosphoprotein via two distinct sites and remains predominantly unfolded. Protein Sci. 14, 1975-1992.
-
(2005)
Protein Sci.
, vol.14
, pp. 1975-1992
-
-
Bourhis, J.M.1
Receveur-Brechot, V.2
Oglesbee, M.3
Zhang, X.4
Buccellato, M.5
-
7
-
-
60349101875
-
Linking folding and binding
-
Wright, P. E., and, Dyson, H. J., (2009) Linking folding and binding. Curr. Opin. Struct. Biol. 19, 31-38.
-
(2009)
Curr. Opin. Struct. Biol.
, vol.19
, pp. 31-38
-
-
Wright, P.E.1
Dyson, H.J.2
-
8
-
-
34547943482
-
Molecular principles of the interactions of disordered proteins
-
Meszaros, B., Tompa, P., Simon, I., and, Dosztanyi, Z., (2007) Molecular principles of the interactions of disordered proteins. J. Mol. Biol. 372, 549-561.
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 549-561
-
-
Meszaros, B.1
Tompa, P.2
Simon, I.3
Dosztanyi, Z.4
-
9
-
-
33751436653
-
What drives proteins into the major or minor grooves of DNA?
-
Privalov, P. L., Dragan, A. I., Crane-Robinson, C., Breslauer, K. J., Remeta, D. P., et al. (2007) What drives proteins into the major or minor grooves of DNA? J. Mol. Biol. 365, 1-9.
-
(2007)
J. Mol. Biol.
, vol.365
, pp. 1-9
-
-
Privalov, P.L.1
Dragan, A.I.2
Crane-Robinson, C.3
Breslauer, K.J.4
Remeta, D.P.5
-
10
-
-
37749053887
-
Fuzzy complexes: Polymorphism and structural disorder in protein-protein interactions
-
Tompa, P., and, Fuxreiter, M., (2008) Fuzzy complexes: polymorphism and structural disorder in protein-protein interactions. Trends Biochem. Sci. 33, 2-8.
-
(2008)
Trends Biochem. Sci.
, vol.33
, pp. 2-8
-
-
Tompa, P.1
Fuxreiter, M.2
-
11
-
-
0029838427
-
A molecular code dictates sequence-specific DNA recognition by homeodomains
-
Damante, G., Pellizzari, L., Esposito, G., Fogolari, F., Viglino, P., et al. (1996) A molecular code dictates sequence-specific DNA recognition by homeodomains. EMBO J 15, 4992-5000.
-
(1996)
EMBO J
, vol.15
, pp. 4992-5000
-
-
Damante, G.1
Pellizzari, L.2
Esposito, G.3
Fogolari, F.4
Viglino, P.5
-
12
-
-
0026660342
-
Differential DNA sequence recognition is a determinant of specificity in homeotic gene action
-
Ekker, S. C., von Kessler, D. P., and, Beachy, P. A., (1992) Differential DNA sequence recognition is a determinant of specificity in homeotic gene action. EMBO J 11, 4059-4072.
-
(1992)
EMBO J
, vol.11
, pp. 4059-4072
-
-
Ekker, S.C.1
Von Kessler, D.P.2
Beachy, P.A.3
-
13
-
-
0027288479
-
Ectopic Expression and function of the Antp and Scr homeotic genes-the N-terminus of the homeodomain is critical to functional specificity
-
Zeng, W. L., Andrew, D. J., Mathies, L. D., Horner, M. A., and, Scott, M. P., (1993) Ectopic Expression and function of the Antp and Scr homeotic genes-the N-terminus of the homeodomain is critical to functional specificity. Development 118, 339-352.
-
(1993)
Development
, vol.118
, pp. 339-352
-
-
Zeng, W.L.1
Andrew, D.J.2
Mathies, L.D.3
Horner, M.A.4
Scott, M.P.5
-
14
-
-
0013484134
-
Structural basis for the binding of proline-rich peptides to SH3 domains
-
Yu, H., Chen, J. K., Feng, S., Dalgarno, D. C., Brauer, A. W., et al. (1994) Structural basis for the binding of proline-rich peptides to SH3 domains. Cell 76, 933-945.
-
(1994)
Cell
, vol.76
, pp. 933-945
-
-
Yu, H.1
Chen, J.K.2
Feng, S.3
Dalgarno, D.C.4
Brauer, A.W.5
-
15
-
-
32444442870
-
The Ste5 scaffold allosterically modulates signaling output of the yeast mating pathway
-
Bhattacharyya, R. P., Remenyi, A., Good, M. C., Bashor, C. J., Falick, A. M., et al. (2006) The Ste5 scaffold allosterically modulates signaling output of the yeast mating pathway. Science 311, 822-826.
-
(2006)
Science
, vol.311
, pp. 822-826
-
-
Bhattacharyya, R.P.1
Remenyi, A.2
Good, M.C.3
Bashor, C.J.4
Falick, A.M.5
-
16
-
-
44449116120
-
Structure of tumor suppressor p53 and its intrinsically disordered N-terminal transactivation domain
-
Wells, M., Tidow, H., Rutherford, T. J., Markwick, P., Jensen, M. R., et al. (2008) Structure of tumor suppressor p53 and its intrinsically disordered N-terminal transactivation domain. Proc. Natl. Acad. Sci. USA 105, 5762-5767.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 5762-5767
-
-
Wells, M.1
Tidow, H.2
Rutherford, T.J.3
Markwick, P.4
Jensen, M.R.5
-
17
-
-
0034255123
-
Speeding molecular recognition by using the folding funnel: The fly-casting mechanism
-
Shoemaker, B. A., Portman, J. J., and, Wolynes, P. G., (2000) Speeding molecular recognition by using the folding funnel: the fly-casting mechanism. Proc. Natl. Acad. Sci. USA 97, 8868-8873.
-
(2000)
Proc. Natl. Acad. Sci. USA
, vol.97
, pp. 8868-8873
-
-
Shoemaker, B.A.1
Portman, J.J.2
Wolynes, P.G.3
-
18
-
-
70350321301
-
Disordered tails of homeodomains facilitate DNA recognition by providing a trade-off between folding and specific binding
-
Toth-Petroczy, A., Simon, I., Fuxreiter, M., and, Levy, Y., (2009) Disordered tails of homeodomains facilitate DNA recognition by providing a trade-off between folding and specific binding. J. Am. Chem. Soc. 131, 15084-15085.
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 15084-15085
-
-
Toth-Petroczy, A.1
Simon, I.2
Fuxreiter, M.3
Levy, Y.4
-
19
-
-
70350012289
-
Kinetic advantage of intrinsically disordered proteins in coupled folding-binding process: A critical assessment of the "fly-casting" mechanism
-
Huang, Y., and, Liu, Z., (2009) Kinetic advantage of intrinsically disordered proteins in coupled folding-binding process: a critical assessment of the "fly-casting" mechanism. J. Mol. Biol. 393, 1143-1159.
-
(2009)
J. Mol. Biol.
, vol.393
, pp. 1143-1159
-
-
Huang, Y.1
Liu, Z.2
-
20
-
-
69549120472
-
Conformational selection or induced fit: A flux description of reaction mechanism
-
Hammes, G. G., Chang, Y. C., and, Oas, T. G., (2009) Conformational selection or induced fit: a flux description of reaction mechanism. Proc. Natl. Acad. Sci. USA 106, 13737-13741.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 13737-13741
-
-
Hammes, G.G.1
Chang, Y.C.2
Oas, T.G.3
-
21
-
-
2142757231
-
Preformed structural elements feature in partner recognition by intrinsically unstructured proteins
-
Fuxreiter, M., Simon, I., Friedrich, P., and, Tompa, P., (2004) Preformed structural elements feature in partner recognition by intrinsically unstructured proteins. J. Mol. Biol. 338, 1015-1026.
-
(2004)
J. Mol. Biol.
, vol.338
, pp. 1015-1026
-
-
Fuxreiter, M.1
Simon, I.2
Friedrich, P.3
Tompa, P.4
-
22
-
-
0037154116
-
Functional consequences of preorganized helical structure in the intrinsically disordered cell-cycle inhibitor p27(Kip1)
-
Bienkiewicz, E. A., Adkins, J. N., and, Lumb, K. J., (2002) Functional consequences of preorganized helical structure in the intrinsically disordered cell-cycle inhibitor p27(Kip1). Biochemistry 41, 752-759.
-
(2002)
Biochemistry
, vol.41
, pp. 752-759
-
-
Bienkiewicz, E.A.1
Adkins, J.N.2
Lumb, K.J.3
-
23
-
-
0036838776
-
The role of helix stabilizing residues in GCN4 basic region folding and DNA binding
-
Hollenbeck, J. J., McClain, D. L., and, Oakley, M. G., (2002) The role of helix stabilizing residues in GCN4 basic region folding and DNA binding. Protein Sci. 11, 2740-2747.
-
(2002)
Protein Sci.
, vol.11
, pp. 2740-2747
-
-
Hollenbeck, J.J.1
McClain, D.L.2
Oakley, M.G.3
-
24
-
-
79952959945
-
Intrinsic disorder mediates the diverse regulatory functions of the Cdk inhibitor p21
-
Wang, Y., Fisher, J. C., Mathew, R., Ou, L., Otieno, S., et al. (2011) Intrinsic disorder mediates the diverse regulatory functions of the Cdk inhibitor p21. Nat. Chem. Biol. 7, 214-221.
-
(2011)
Nat. Chem. Biol.
, vol.7
, pp. 214-221
-
-
Wang, Y.1
Fisher, J.C.2
Mathew, R.3
Ou, L.4
Otieno, S.5
-
25
-
-
27144528728
-
Disordered p27Kip1 exhibits intrinsic structure resembling the Cdk2/cyclin A-bound conformation
-
Sivakolundu, S. G., Bashford, D., and, Kriwacki, R. W., (2005) Disordered p27Kip1 exhibits intrinsic structure resembling the Cdk2/cyclin A-bound conformation. J. Mol. Biol. 353, 1118-1128.
-
(2005)
J. Mol. Biol.
, vol.353
, pp. 1118-1128
-
-
Sivakolundu, S.G.1
Bashford, D.2
Kriwacki, R.W.3
-
26
-
-
84863116271
-
Understanding pre-structured motifs (PreSMos) in intrinsically unfolded proteins
-
Lee, S. H., Kim, D. H., Han, J. J., Cha, E. J., Lim, J. E., et al. (2011) Understanding pre-structured motifs (PreSMos) in intrinsically unfolded proteins. Curr. Protein Pept. Sci. [Epub ahead of print].
-
(2011)
Curr. Protein Pept. Sci.
-
-
Lee, S.H.1
Kim, D.H.2
Han, J.J.3
Cha, E.J.4
Lim, J.E.5
-
27
-
-
14844361449
-
Primary contact sites in intrinsically unstructured proteins: The case of calpastatin and microtubule-associated protein 2
-
Csizmok, V., Bokor, M., Banki, P., Klement, E., Medzihradszky, K. F., et al. (2005) Primary contact sites in intrinsically unstructured proteins: the case of calpastatin and microtubule-associated protein 2. Biochemistry 44, 3955-3964.
-
(2005)
Biochemistry
, vol.44
, pp. 3955-3964
-
-
Csizmok, V.1
Bokor, M.2
Banki, P.3
Klement, E.4
Medzihradszky, K.F.5
-
28
-
-
65249102824
-
Close encounters of the third kind: Disordered domains and the interactions of proteins
-
Tompa, P., Fuxreiter, M., Oldfield, C. J., Simon, I., Dunker, A. K., et al. (2009) Close encounters of the third kind: disordered domains and the interactions of proteins. Bioessays 31, 328-335.
-
(2009)
Bioessays
, vol.31
, pp. 328-335
-
-
Tompa, P.1
Fuxreiter, M.2
Oldfield, C.J.3
Simon, I.4
Dunker, A.K.5
-
29
-
-
29144455315
-
Systematic discovery of new recognition peptides mediating protein interaction networks
-
Neduva, V., Linding, R., Su-Angrand, I., Stark, A., de Masi, F., et al. (2005) Systematic discovery of new recognition peptides mediating protein interaction networks. PLoS Biol 3, e405.
-
(2005)
PLoS Biol
, vol.3
-
-
Neduva, V.1
Linding, R.2
Su-Angrand, I.3
Stark, A.4
De Masi, F.5
-
30
-
-
20444414545
-
Linear motifs: Evolutionary interaction switches
-
Neduva, V., and, Russell, R. B., (2005) Linear motifs: evolutionary interaction switches. FEBS Lett 579, 3342-3345.
-
(2005)
FEBS Lett
, vol.579
, pp. 3342-3345
-
-
Neduva, V.1
Russell, R.B.2
-
31
-
-
0042622252
-
ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins
-
Puntervoll, P., Linding, R., Gemund, C., Chabanis-Davidson, S., Mattingsdal, M., et al. (2003) ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Res. 31, 3625-3630.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3625-3630
-
-
Puntervoll, P.1
Linding, R.2
Gemund, C.3
Chabanis-Davidson, S.4
Mattingsdal, M.5
-
32
-
-
33746812318
-
SLiMDisc: Short, linear motif discovery, correcting for common evolutionary descent
-
Davey, N. E., Shields, D. C., and, Edwards, R. J., (2006) SLiMDisc: short, linear motif discovery, correcting for common evolutionary descent. Nucleic Acids Res. 34, 3546-3554.
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 3546-3554
-
-
Davey, N.E.1
Shields, D.C.2
Edwards, R.J.3
-
33
-
-
82655175482
-
Attributes of short linear motifs
-
Davey, N. E., Van Roey, K., Weatheritt, R. J., Toedt, G., Uyar, B., et al. (2012) Attributes of short linear motifs. Mol. Biosyst. 8, 268-281.
-
(2012)
Mol. Biosyst.
, vol.8
, pp. 268-281
-
-
Davey, N.E.1
Van Roey, K.2
Weatheritt, R.J.3
Toedt, G.4
Uyar, B.5
-
34
-
-
80051927358
-
Incomplete folding upon binding mediates Cdk4/cyclin D complex activation by tyrosine phosphorylation of inhibitor p27 protein
-
Ou, L., Ferreira, A. M., Otieno, S., Xiao, L., Bashford, D., et al. Incomplete folding upon binding mediates Cdk4/cyclin D complex activation by tyrosine phosphorylation of inhibitor p27 protein. J. Biol. Chem. 286, 30142-30151.
-
J. Biol. Chem.
, vol.286
, pp. 30142-30151
-
-
Ou, L.1
Ferreira, A.M.2
Otieno, S.3
Xiao, L.4
Bashford, D.5
-
35
-
-
70349308508
-
Cell regulation: Determined to signal discrete cooperation
-
Gibson, T. J., (2009) Cell regulation: determined to signal discrete cooperation. Trends Biochem. Sci 34, 471-482.
-
(2009)
Trends Biochem. Sci
, vol.34
, pp. 471-482
-
-
Gibson, T.J.1
-
36
-
-
33645034035
-
Intrinsic disorder is a key characteristic in partners that bind 14-3-3 proteins
-
Bustos, D. M., and, Iglesias, A. A., (2006) Intrinsic disorder is a key characteristic in partners that bind 14-3-3 proteins. Proteins 63, 35-42.
-
(2006)
Proteins
, vol.63
, pp. 35-42
-
-
Bustos, D.M.1
Iglesias, A.A.2
-
37
-
-
77952882922
-
Comparative genomics and disorder prediction identify biologically relevant SH3 protein interactions
-
Beltrao, P., and, Serrano, L., (2005) Comparative genomics and disorder prediction identify biologically relevant SH3 protein interactions. PLoS Comput. Biol. 1, e26.
-
(2005)
PLoS Comput. Biol.
, vol.1
-
-
Beltrao, P.1
Serrano, L.2
-
38
-
-
2342473198
-
The importance of intrinsic disorder for protein phosphorylation
-
Iakoucheva, L. M., Radivojac, P., Brown, C. J., O'Connor, T. R., Sikes, J. G., et al. (2004) The importance of intrinsic disorder for protein phosphorylation. Nucleic Acids Res. 32, 1037-1049.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1037-1049
-
-
Iakoucheva, L.M.1
Radivojac, P.2
Brown, C.J.3
O'Connor, T.R.4
Sikes, J.G.5
-
39
-
-
34249695447
-
Local structural disorder imparts plasticity on linear motifs
-
Fuxreiter, M., Tompa, P., and, Simon, I., (2007) Local structural disorder imparts plasticity on linear motifs. Bioinformatics 23, 950-956.
-
(2007)
Bioinformatics
, vol.23
, pp. 950-956
-
-
Fuxreiter, M.1
Tompa, P.2
Simon, I.3
-
40
-
-
33745289067
-
Length-dependent prediction of protein intrinsic disorder
-
Peng, K., Radivojac, P., Vucetic, S., Dunker, A. K., and, Obradovic, Z., (2006) Length-dependent prediction of protein intrinsic disorder. BMC Bioinformatics 7, 208.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 208
-
-
Peng, K.1
Radivojac, P.2
Vucetic, S.3
Dunker, A.K.4
Obradovic, Z.5
-
41
-
-
14844342815
-
The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins
-
Dosztanyi, Z., Csizmok, V., Tompa, P., and, Simon, I., (2005) The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins. J. Mol. Biol. 347, 827-839.
-
(2005)
J. Mol. Biol.
, vol.347
, pp. 827-839
-
-
Dosztanyi, Z.1
Csizmok, V.2
Tompa, P.3
Simon, I.4
-
42
-
-
60149099647
-
Masking residues using context specific evolutionary conservation significantly improves short linear motif discovery
-
Davey, M., Denis, S., and, Richard, E., (2009) Masking residues using context specific evolutionary conservation significantly improves short linear motif discovery. Bioinformatics 25, 443-450.
-
(2009)
Bioinformatics
, vol.25
, pp. 443-450
-
-
Davey, M.1
Denis, S.2
Richard, E.3
-
43
-
-
24944546549
-
Coupled folding and binding with alpha-helix-forming molecular recognition elements
-
Oldfield, C. J., Cheng, Y., Cortese, M. S., Romero, P., Uversky, V. N., et al. (2005) Coupled folding and binding with alpha-helix-forming molecular recognition elements. Biochemistry 44, 12454-12470.
-
(2005)
Biochemistry
, vol.44
, pp. 12454-12470
-
-
Oldfield, C.J.1
Cheng, Y.2
Cortese, M.S.3
Romero, P.4
Uversky, V.N.5
-
44
-
-
0035022941
-
Intrinsically disordered protein
-
Dunker, A. K., Lawson, J. D., Brown, C. J., Romero, P., Oh, J. S., et al. (2001) Intrinsically disordered protein. J. Mol. Graphics Modelling 19, 26-59.
-
(2001)
J. Mol. Graphics Modelling
, vol.19
, pp. 26-59
-
-
Dunker, A.K.1
Lawson, J.D.2
Brown, C.J.3
Romero, P.4
Oh, J.S.5
-
45
-
-
0002582635
-
Predicting binding regions within disordered proteins
-
Garner, E., Romero, P., Dunker, A. K., Brown, C., and, Obradovic, Z., (1999) Predicting binding regions within disordered proteins. Genome Inform. Ser. Workshop Genome Inform. 10, 41-50.
-
(1999)
Genome Inform. Ser. Workshop Genome Inform.
, vol.10
, pp. 41-50
-
-
Garner, E.1
Romero, P.2
Dunker, A.K.3
Brown, C.4
Obradovic, Z.5
-
46
-
-
33748456399
-
Analysis of molecular recognition features (MoRFs)
-
Mohan, A., Oldfield, C. J., Radivojac, P., Vacic, V., Cortese, M. S., et al. (2006) Analysis of molecular recognition features (MoRFs). J. Mol. Biol. 362, 1043-1059.
-
(2006)
J. Mol. Biol.
, vol.362
, pp. 1043-1059
-
-
Mohan, A.1
Oldfield, C.J.2
Radivojac, P.3
Vacic, V.4
Cortese, M.S.5
-
47
-
-
67049119327
-
Prediction of protein binding regions in disordered proteins
-
Meszaros, B., Simon, I., and, Dosztanyi, Z., (2009) Prediction of protein binding regions in disordered proteins. PLoS Comput. Biol. 5, e1000376.
-
(2009)
PLoS Comput. Biol.
, vol.5
-
-
Meszaros, B.1
Simon, I.2
Dosztanyi, Z.3
-
48
-
-
0029909384
-
An iterative method for extracting energy-like quantities from protein structures
-
Thomas, P. D., and, Dill, K. A., (1996) An iterative method for extracting energy-like quantities from protein structures. Proc. Natl. Acad. Sci. USA 93, 11628-11633.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 11628-11633
-
-
Thomas, P.D.1
Dill, K.A.2
-
49
-
-
70349996473
-
ANCHOR: Web server for predicting protein binding regions in disordered proteins
-
Dosztanyi, Z., Meszaros, B., and, Simon, I., (2009) ANCHOR: web server for predicting protein binding regions in disordered proteins. Bioinformatics 25, 2745-2746.
-
(2009)
Bioinformatics
, vol.25
, pp. 2745-2746
-
-
Dosztanyi, Z.1
Meszaros, B.2
Simon, I.3
-
50
-
-
56249101714
-
Malleable machines take shape in eukaryotic transcriptional regulation
-
Fuxreiter, M., Tompa, P., Simon, I., Uversky, V. N., Hansen, J. C., et al. (2008) Malleable machines take shape in eukaryotic transcriptional regulation. Nat. Chem. Biol. 4, 728-737.
-
(2008)
Nat. Chem. Biol.
, vol.4
, pp. 728-737
-
-
Fuxreiter, M.1
Tompa, P.2
Simon, I.3
Uversky, V.N.4
Hansen, J.C.5
-
51
-
-
80053441923
-
Dynamic protein-DNA recognition: Beyond what can be seen
-
Fuxreiter, M., Simon, I., and, Bondos, S., (2011) Dynamic protein-DNA recognition: beyond what can be seen. Trends Biochem. Sci. 36, 415-423.
-
(2011)
Trends Biochem. Sci.
, vol.36
, pp. 415-423
-
-
Fuxreiter, M.1
Simon, I.2
Bondos, S.3
-
52
-
-
51049119258
-
Multiple intrinsically disordered sequences alter DNA binding by the homeodomain of the Drosophila hox protein ultrabithorax
-
Liu, Y., Matthews, K. S., and, Bondos, S. E., (2008) Multiple intrinsically disordered sequences alter DNA binding by the homeodomain of the Drosophila hox protein ultrabithorax. J. Biol. Chem. 283, 20874-20887.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 20874-20887
-
-
Liu, Y.1
Matthews, K.S.2
Bondos, S.E.3
-
53
-
-
21744436606
-
Variable control of Ets-1 DNA binding by multiple phosphates in an unstructured region
-
Pufall, M. A., Lee, G. M., Nelson, M. L., Kang, H. S., Velyvis, A., et al. (2005) Variable control of Ets-1 DNA binding by multiple phosphates in an unstructured region. Science 309, 142-145.
-
(2005)
Science
, vol.309
, pp. 142-145
-
-
Pufall, M.A.1
Lee, G.M.2
Nelson, M.L.3
Kang, H.S.4
Velyvis, A.5
-
54
-
-
0035969559
-
Multisite phosphorylation of a CDK inhibitor sets a threshold for the onset of DNA replication
-
Nash, P., Tang, X., Orlicky, S., Chen, Q., Gertler, F. B., et al. (2001) Multisite phosphorylation of a CDK inhibitor sets a threshold for the onset of DNA replication. Nature 414, 514-521.
-
(2001)
Nature
, vol.414
, pp. 514-521
-
-
Nash, P.1
Tang, X.2
Orlicky, S.3
Chen, Q.4
Gertler, F.B.5
-
55
-
-
34547462095
-
Polyelectrostatic interactions of disordered ligands suggest a physical basis for ultrasensitivity
-
Borg, M., Mittag, T., Pawson, T., Tyers, M., Forman-Kay, J. D., et al. (2007) Polyelectrostatic interactions of disordered ligands suggest a physical basis for ultrasensitivity. Proc. Natl. Acad. Sci. USA 104, 9650-9655.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 9650-9655
-
-
Borg, M.1
Mittag, T.2
Pawson, T.3
Tyers, M.4
Forman-Kay, J.D.5
-
56
-
-
56649112976
-
Dynamic equilibrium engagement of a polyvalent ligand with a single-site receptor
-
Mittag, T., Orlicky, S., Choy, W. Y., Tang, X., Lin, H., et al. (2008) Dynamic equilibrium engagement of a polyvalent ligand with a single-site receptor. Proc. Natl. Acad. Sci. USA 105, 17772-17777.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 17772-17777
-
-
Mittag, T.1
Orlicky, S.2
Choy, W.Y.3
Tang, X.4
Lin, H.5
-
57
-
-
39049162291
-
Role of intrinsic flexibility in signal transduction mediated by the cell cycle regulator, p27 Kip1
-
Galea, C. A., Nourse, A., Wang, Y., Sivakolundu, S. G., Heller, W. T., et al. (2008) Role of intrinsic flexibility in signal transduction mediated by the cell cycle regulator, p27 Kip1. J. Mol. Biol. 376, 827-838.
-
(2008)
J. Mol. Biol.
, vol.376
, pp. 827-838
-
-
Galea, C.A.1
Nourse, A.2
Wang, Y.3
Sivakolundu, S.G.4
Heller, W.T.5
-
58
-
-
0029131298
-
Structural basis for DNA bending by the architectural transcription factor LEF-1
-
Love, J. J., Li, X., Case, D. A., Giese, K., Grosschedl, R., et al. (1995) Structural basis for DNA bending by the architectural transcription factor LEF-1. Nature 376, 791-795.
-
(1995)
Nature
, vol.376
, pp. 791-795
-
-
Love, J.J.1
Li, X.2
Case, D.A.3
Giese, K.4
Grosschedl, R.5
-
59
-
-
0034725628
-
Interaction of inhibitor-2 with the catalytic subunit of type 1 protein phosphatase. Identification of a sequence analogous to the consensus type 1 protein phosphatase-binding motif
-
Yang, J., Hurley, T. D., and, DePaoli-Roach, A. A., (2000) Interaction of inhibitor-2 with the catalytic subunit of type 1 protein phosphatase. Identification of a sequence analogous to the consensus type 1 protein phosphatase-binding motif. J. Biol. Chem. 275, 22635-22644.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 22635-22644
-
-
Yang, J.1
Hurley, T.D.2
Depaoli-Roach, A.A.3
-
60
-
-
84857050647
-
How a single residue in individual beta-thymosin/WH2 domains controls their functions in actin assembly
-
Didry, D., Cantrelle, F. X., Husson, C., Roblin, P., Moorthy, A. M., et al. (2011) How a single residue in individual beta-thymosin/WH2 domains controls their functions in actin assembly. EMBO J. 31, 1000-1013.
-
(2011)
EMBO J
, vol.31
, pp. 1000-1013
-
-
Didry, D.1
Cantrelle, F.X.2
Husson, C.3
Roblin, P.4
Moorthy, A.M.5
-
61
-
-
56749143763
-
Concerted multi-pronged attach by calpastatin to occlude the catalytic cleft of heterotrimetic calpains
-
Moldoveanu, T., Gehring K., and, Green, D., (2008) Concerted multi-pronged attach by calpastatin to occlude the catalytic cleft of heterotrimetic calpains. Nature 404-408.
-
(2008)
Nature
, pp. 404-408
-
-
Moldoveanu, T.1
Gehring, K.2
Green, D.3
|