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Volumn 86, Issue 10, 2012, Pages 5562-5573

Identification of novel positive-strand RNA viruses by metagenomic analysis of archaea-dominated yellowstone hot springs

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; RNA POLYMERASE; VIRUS RNA;

EID: 84861313038     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.07196-11     Document Type: Article
Times cited : (98)

References (75)
  • 1
    • 18744382506 scopus 로고    scopus 로고
    • ProtTest: selection of best-fit models of protein evolution
    • Abascal F, Zardoya R, Posada D. 2005. ProtTest: selection of best-fit models of protein evolution. Bioinformatics 21:2104-2105.
    • (2005) Bioinformatics , vol.21 , pp. 2104-2105
    • Abascal, F.1    Zardoya, R.2    Posada, D.3
  • 2
    • 33846408740 scopus 로고    scopus 로고
    • 5500 phages examined in the electron microscope
    • Ackermann HW. 2007. 5500 phages examined in the electron microscope. Arch. Virol. 152:227-243.
    • (2007) Arch. Virol. , vol.152 , pp. 227-243
    • Ackermann, H.W.1
  • 4
    • 0030801002 scopus 로고    scopus 로고
    • Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
    • Altschul SF, et al. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
    • (1997) Nucleic Acids Res , vol.25 , pp. 3389-3402
    • Altschul, S.F.1
  • 5
    • 33751059692 scopus 로고    scopus 로고
    • The marine viromes of four oceanic regions
    • Angly FE, et al. 2006. The marine viromes of four oceanic regions. Plos Biol. 4:2121-2131.
    • (2006) Plos Biol , vol.4 , pp. 2121-2131
    • Angly, F.E.1
  • 6
    • 0034608829 scopus 로고    scopus 로고
    • SNDV, a novel virus of the extremely thermophilic and acidophilic archaeon Sulfolobus
    • Arnold HP, Ziese U, Zillig W. 2000. SNDV, a novel virus of the extremely thermophilic and acidophilic archaeon Sulfolobus. Virology 272:409-416.
    • (2000) Virology , vol.272 , pp. 409-416
    • Arnold, H.P.1    Ziese, U.2    Zillig, W.3
  • 7
    • 34047118522 scopus 로고    scopus 로고
    • CRISPR provides acquired resistance against viruses in prokaryotes
    • Barrangou R, et al. 2007. CRISPR provides acquired resistance against viruses in prokaryotes. Science 315:1709-1712.
    • (2007) Science , vol.315 , pp. 1709-1712
    • Barrangou, R.1
  • 8
    • 34447644810 scopus 로고    scopus 로고
    • CRISPR recognition tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats
    • Bland C, et al. 2007. CRISPR recognition tool (CRT): a tool for automatic detection of clustered regularly interspaced palindromic repeats. BMC Bioinformatics 8:209.
    • (2007) BMC Bioinformatics , vol.8 , pp. 209
    • Bland, C.1
  • 9
    • 0036793770 scopus 로고    scopus 로고
    • Microbial composition of nearboiling silica-depositing thermal springs throughout Yellowstone National Park
    • Blank CE, Cady SL, Pace NR. 2002. Microbial composition of nearboiling silica-depositing thermal springs throughout Yellowstone National Park. Appl. Environ. Microbiol. 68:5123-5135.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5123-5135
    • Blank, C.E.1    Cady, S.L.2    Pace, N.R.3
  • 10
    • 1642363900 scopus 로고    scopus 로고
    • Diversity and population structure of a nearshore marine-sediment viral community
    • Breitbart M, et al. 2004. Diversity and population structure of a nearshore marine-sediment viral community. Proc. Biol. Sci. 271:565-574.
    • (2004) Proc. Biol. Sci. , vol.271 , pp. 565-574
    • Breitbart, M.1
  • 11
    • 0141891348 scopus 로고    scopus 로고
    • Metagenomic analyses of an uncultured viral community from human feces
    • Breitbart M, et al. 2003. Metagenomic analyses of an uncultured viral community from human feces. J. Bacteriol. 185:6220-6223.
    • (2003) J. Bacteriol. , vol.185 , pp. 6220-6223
    • Breitbart, M.1
  • 12
    • 20344382957 scopus 로고    scopus 로고
    • Here a virus, there a virus, everywhere the same virus?
    • Breitbart M, Rohwer F. 2005. Here a virus, there a virus, everywhere the same virus? Trends Microbiol. 13:278-284.
    • (2005) Trends Microbiol , vol.13 , pp. 278-284
    • Breitbart, M.1    Rohwer, F.2
  • 13
    • 0037195156 scopus 로고    scopus 로고
    • Genomic analysis of uncultured marine viral communities
    • Breitbart M, et al. 2002. Genomic analysis of uncultured marine viral communities. Proc. Natl. Acad. Sci. U. S. A. 99:14250-14255.
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 14250-14255
    • Breitbart, M.1
  • 14
    • 14944358901 scopus 로고    scopus 로고
    • Analysis of the virus population present in equine faeces indicates the presence of hundreds of uncharacterized virus genomes
    • Cann AJ, Fandrich SE, Heaphy S. 2005. Analysis of the virus population present in equine faeces indicates the presence of hundreds of uncharacterized virus genomes. Virus Genes 30:151-156.
    • (2005) Virus Genes , vol.30 , pp. 151-156
    • Cann, A.J.1    Fandrich, S.E.2    Heaphy, S.3
  • 15
    • 0028773272 scopus 로고
    • Functional implications of quasi-equivalence in a T 3 icosahedral animal virus established by cryo-electron microscopy and X-ray crystallography
    • Cheng RH, et al. 1994. Functional implications of quasi-equivalence in a T 3 icosahedral animal virus established by cryo-electron microscopy and X-ray crystallography. Structure 2:271-282.
    • (1994) Structure , vol.2 , pp. 271-282
    • Cheng, R.H.1
  • 16
    • 0042364932 scopus 로고    scopus 로고
    • High diversity of unknown picornalike viruses in the sea
    • Culley AI, Lang AS, Suttle CA. 2003. High diversity of unknown picornalike viruses in the sea. Nature 424:1054-1057.
    • (2003) Nature , vol.424 , pp. 1054-1057
    • Culley, A.I.1    Lang, A.S.2    Suttle, C.A.3
  • 17
    • 33745513227 scopus 로고    scopus 로고
    • Metagenomic analysis of coastal RNA virus communities
    • Culley AI, Lang AS, Suttle CA. 2006. Metagenomic analysis of coastal RNA virus communities. Science 312:1795-1798.
    • (2006) Science , vol.312 , pp. 1795-1798
    • Culley, A.I.1    Lang, A.S.2    Suttle, C.A.3
  • 18
    • 33746061683 scopus 로고    scopus 로고
    • Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
    • DeSantis TZ, et al. 2006. Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl. Environ. Microbiol. 72:5069-5072.
    • (2006) Appl. Environ. Microbiol. , vol.72 , pp. 5069-5072
    • DeSantis, T.Z.1
  • 20
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 21
    • 43749107283 scopus 로고    scopus 로고
    • Comparative protein structure modeling using Modeller
    • Eswar N, et al. 2006. Comparative protein structure modeling using Modeller. Curr. Protoc. Bioinformatics 5:5.6.
    • (2006) Curr. Protoc. Bioinformatics , vol.5
    • Eswar, N.1
  • 22
    • 79551495231 scopus 로고    scopus 로고
    • CRISPR-based immune systems of the Sulfolobales: complexity and diversity
    • Garrett RA, et al. 2011. CRISPR-based immune systems of the Sulfolobales: complexity and diversity. Biochem. Soc. Trans. 39:51-57.
    • (2011) Biochem. Soc. Trans. , vol.39 , pp. 51-57
    • Garrett, R.A.1
  • 23
    • 33744804299 scopus 로고    scopus 로고
    • Metagenomic analysis of the human distal gut microbiome
    • Gill SR, et al. 2006. Metagenomic analysis of the human distal gut microbiome. Science 312:1355-1359.
    • (2006) Science , vol.312 , pp. 1355-1359
    • Gill, S.R.1
  • 24
    • 0034682792 scopus 로고    scopus 로고
    • Poliovirus RNA-dependent RNA polymerase (3D(pol))-structural, biochemical, and biological analysis of conserved structural motifs A and B
    • Gohara DW, et al. 2000. Poliovirus RNA-dependent RNA polymerase (3D(pol))-structural, biochemical, and biological analysis of conserved structural motifs A and B. J. Biol. Chem. 275:25523-25532.
    • (2000) J. Biol. Chem. , vol.275 , pp. 25523-25532
    • Gohara, D.W.1
  • 25
    • 34547579396 scopus 로고    scopus 로고
    • CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats
    • Grissa I, Vergnaud G, Pourcel C. 2007. CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats. Nucleic Acids Res. 35:W52-W57.
    • (2007) Nucleic Acids Res , vol.35
    • Grissa, I.1    Vergnaud, G.2    Pourcel, C.3
  • 26
    • 70449753811 scopus 로고    scopus 로고
    • RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex
    • Hale CR, et al. 2009. RNA-guided RNA cleavage by a CRISPR RNA-Cas protein complex. Cell 139:945-956.
    • (2009) Cell , vol.139 , pp. 945-956
    • Hale, C.R.1
  • 27
    • 77954288774 scopus 로고    scopus 로고
    • Dali server: conservation mapping in 3D
    • Holm L, Rosenstrom P. 2010. Dali server: conservation mapping in 3D. Nucleic Acids Res. 38:W545-W549.
    • (2010) Nucleic Acids Res , vol.38
    • Holm, L.1    Rosenstrom, P.2
  • 28
    • 70349196002 scopus 로고    scopus 로고
    • RNA virus genomics: a world of possibilities
    • Holmes EC. 2009. RNA virus genomics: a world of possibilities. J. Clin. Invest. 119:2488-2495.
    • (2009) J. Clin. Invest. , vol.119 , pp. 2488-2495
    • Holmes, E.C.1
  • 29
    • 38949214103 scopus 로고    scopus 로고
    • Diversity, activity, and evolution of CRISPR loci in Streptococcus thermophilus
    • Horvath P, et al. 2008. Diversity, activity, and evolution of CRISPR loci in Streptococcus thermophilus. J. Bacteriol. 190:1401-1412.
    • (2008) J. Bacteriol. , vol.190 , pp. 1401-1412
    • Horvath, P.1
  • 30
    • 78149423315 scopus 로고    scopus 로고
    • Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function
    • Inskeep WP, et al. 2010. Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function. PLoS One 5:e9773.
    • (2010) PLoS One , vol.5
    • Inskeep, W.P.1
  • 31
    • 66449084442 scopus 로고    scopus 로고
    • Infrastructure for the life sciences: design and implementation of the UniProt website
    • Jain E, et al. 2009. Infrastructure for the life sciences: design and implementation of the UniProt website. BMC Bioinformatics 10:136.
    • (2009) BMC Bioinformatics , vol.10 , pp. 136
    • Jain, E.1
  • 32
    • 0021770887 scopus 로고
    • Primary structural comparison of RNAdependent polymerases from plant, animal and bacterial-viruses
    • Kamer G, Argos P. 1984. Primary structural comparison of RNAdependent polymerases from plant, animal and bacterial-viruses. Nucleic Acids Res. 12:7269-7282.
    • (1984) Nucleic Acids Res , vol.12 , pp. 7269-7282
    • Kamer, G.1    Argos, P.2
  • 33
    • 37349062717 scopus 로고    scopus 로고
    • A highly divergent picornavirus in a marine mammal
    • Kapoor A, et al. 2008. A highly divergent picornavirus in a marine mammal. J. Virol. 82:311-320.
    • (2008) J. Virol. , vol.82 , pp. 311-320
    • Kapoor, A.1
  • 34
    • 0035945618 scopus 로고    scopus 로고
    • Archaeal dominance in the mesopelagic zone of the Pacific Ocean
    • Karner MB, DeLong EF, Karl DM. 2001. Archaeal dominance in the mesopelagic zone of the Pacific Ocean. Nature 409:507-510.
    • (2001) Nature , vol.409 , pp. 507-510
    • Karner, M.B.1    DeLong, E.F.2    Karl, D.M.3
  • 35
    • 63849246525 scopus 로고    scopus 로고
    • Protein structure prediction on the Web: a case study using the Phyre server
    • Kelley LA, Sternberg MJ. 2009. Protein structure prediction on the Web: a case study using the Phyre server. Nat. Protoc. 4:363-371.
    • (2009) Nat. Protoc. , vol.4 , pp. 363-371
    • Kelley, L.A.1    Sternberg, M.J.2
  • 36
    • 79960560749 scopus 로고    scopus 로고
    • Community ecology of hot spring cyanobacterial mats: predominant populations and their functional potential
    • Klatt CG, et al. 2011. Community ecology of hot spring cyanobacterial mats: predominant populations and their functional potential. ISME J. 5:1262-1278.
    • (2011) ISME J , vol.5 , pp. 1262-1278
    • Klatt, C.G.1
  • 37
    • 0025979177 scopus 로고
    • Small cysteine-rich proteins of different groups of plant RNA viruses are related to different families of nucleic acid-binding proteins
    • Koonin EV, Boyko VP, Dolja VV. 1991. Small cysteine-rich proteins of different groups of plant RNA viruses are related to different families of nucleic acid-binding proteins. Virology 181:395-398.
    • (1991) Virology , vol.181 , pp. 395-398
    • Koonin, E.V.1    Boyko, V.P.2    Dolja, V.V.3
  • 38
    • 0027504136 scopus 로고
    • Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences
    • Koonin EV, Dolja VV. 1993. Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences. Crit. Rev. Biochem. Mol. Biol. 28:375-430.
    • (1993) Crit. Rev. Biochem. Mol. Biol. , vol.28 , pp. 375-430
    • Koonin, E.V.1    Dolja, V.V.2
  • 40
    • 56349152646 scopus 로고    scopus 로고
    • The Big Bang of picorna-like virus evolution antedates the radiation of eukaryotic supergroups
    • Koonin EV, Wolf YI, Nagasaki K, Dolja VV. 2008. The Big Bang of picorna-like virus evolution antedates the radiation of eukaryotic supergroups. Nat. Rev. Microbiol. 6:925-939.
    • (2008) Nat. Rev. Microbiol. , vol.6 , pp. 925-939
    • Koonin, E.V.1    Wolf, Y.I.2    Nagasaki, K.3    Dolja, V.V.4
  • 41
    • 35748974534 scopus 로고    scopus 로고
    • Evolutionary conservation of sequence and secondary structures in CRISPR repeats
    • Kunin V, Sorek R, Hugenholtz P. 2007. Evolutionary conservation of sequence and secondary structures in CRISPR repeats. Genome Biol. 8:R61.
    • (2007) Genome Biol , vol.8
    • Kunin, V.1    Sorek, R.2    Hugenholtz, P.3
  • 42
    • 67649823469 scopus 로고    scopus 로고
    • Structural and functional studies of archaeal viruses
    • Lawrence CM, et al. 2009. Structural and functional studies of archaeal viruses. J. Biol. Chem. 284:12599-12603.
    • (2009) J. Biol. Chem. , vol.284 , pp. 12599-12603
    • Lawrence, C.M.1
  • 43
    • 79960564246 scopus 로고    scopus 로고
    • Metatranscriptomic analyses of chlorophototrophs of a hot-spring microbial mat
    • Liu Z, et al. 2011. Metatranscriptomic analyses of chlorophototrophs of a hot-spring microbial mat. ISME J. 5:1279-1290.
    • (2011) ISME J , vol.5 , pp. 1279-1290
    • Liu, Z.1
  • 44
    • 34248374277 scopus 로고    scopus 로고
    • A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action
    • Makarova KS, Grishin NV, Shabalina SA, Wolf YI, Koonin EV. 2006. A putative RNA-interference-based immune system in prokaryotes: computational analysis of the predicted enzymatic machinery, functional analogies with eukaryotic RNAi, and hypothetical mechanisms of action. Biol. Direct 1:7.
    • (2006) Biol. Direct , vol.1 , pp. 7
    • Makarova, K.S.1    Grishin, N.V.2    Shabalina, S.A.3    Wolf, Y.I.4    Koonin, E.V.5
  • 45
    • 79956157571 scopus 로고    scopus 로고
    • Evolution and classification of the CRISPR-Cas systems
    • Makarova KS, et al. 2011. Evolution and classification of the CRISPR-Cas systems. Nat. Rev. Microbiol. 9:467-477.
    • (2011) Nat. Rev. Microbiol. , vol.9 , pp. 467-477
    • Makarova, K.S.1
  • 46
    • 77957130448 scopus 로고    scopus 로고
    • Evolution of diverse cell division and vesicle formation systems in Archaea
    • Makarova KS, Yutin N, Bell SD, Koonin EV. 2010. Evolution of diverse cell division and vesicle formation systems in Archaea. Nat. Rev. Microbiol. 8:731-741.
    • (2010) Nat. Rev. Microbiol. , vol.8 , pp. 731-741
    • Makarova, K.S.1    Yutin, N.2    Bell, S.D.3    Koonin, E.V.4
  • 47
    • 78651285748 scopus 로고    scopus 로고
    • CDD: a Conserved Domain Database for the functional annotation of proteins
    • Marchler-Bauer A, et al. 2011. CDD: a Conserved Domain Database for the functional annotation of proteins. Nucleic Acids Res. 39:D225-D229.
    • (2011) Nucleic Acids Res , vol.39
    • Marchler-Bauer, A.1
  • 48
    • 0000264642 scopus 로고
    • Sav-1, a temperate UV-inducible DNA virus-like particle from the archaebacterium Sulfolobus acidocaldarius isolate B12
    • Martin A, et al. 1984. Sav-1, a temperate UV-inducible DNA virus-like particle from the archaebacterium Sulfolobus acidocaldarius isolate B12. EMBO J. 3:2165-2168.
    • (1984) EMBO J , vol.3 , pp. 2165-2168
    • Martin, A.1
  • 49
    • 53549118607 scopus 로고    scopus 로고
    • The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes
    • Meyer F, et al. 2008. The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics 9:386.
    • (2008) BMC Bioinformatics , vol.9 , pp. 386
    • Meyer, F.1
  • 50
    • 77950645212 scopus 로고    scopus 로고
    • Artificial and natural duplicates in pyrosequencing reads of metagenomic data
    • Niu B, Fu L, Sun S, Li W. 2010. Artificial and natural duplicates in pyrosequencing reads of metagenomic data. BMC Bioinformatics 11:187.
    • (2010) BMC Bioinformatics , vol.11 , pp. 187
    • Niu, B.1    Fu, L.2    Sun, S.3    Li, W.4
  • 51
    • 79955598535 scopus 로고    scopus 로고
    • Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group
    • Nunoura T, et al. 2011. Insights into the evolution of Archaea and eukaryotic protein modifier systems revealed by the genome of a novel archaeal group. Nucleic Acids Res. 39:3204-3223.
    • (2011) Nucleic Acids Res , vol.39 , pp. 3204-3223
    • Nunoura, T.1
  • 52
    • 64149084027 scopus 로고    scopus 로고
    • An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope
    • Pietila MK, Roine E, Paulin L, Kalkkinen N, Bamford DH. 2009. An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope. Mol. Microbiol. 72:307-319.
    • (2009) Mol. Microbiol. , vol.72 , pp. 307-319
    • Pietila, M.K.1    Roine, E.2    Paulin, L.3    Kalkkinen, N.4    Bamford, D.H.5
  • 53
    • 0345583680 scopus 로고    scopus 로고
    • A novel virus family, the Rudiviridae: structure, virus-host interactions and genome variability of the Sulfolobus viruses SIRV1 and SIRV2
    • Prangishvili D, et al. 1999. A novel virus family, the Rudiviridae: structure, virus-host interactions and genome variability of the Sulfolobus viruses SIRV1 and SIRV2. Genetics 152:1387-1396.
    • (1999) Genetics , vol.152 , pp. 1387-1396
    • Prangishvili, D.1
  • 54
    • 2342544133 scopus 로고    scopus 로고
    • Exceptionally diverse morphotypes and genomes of crenarchaeal hyperthermophilic viruses
    • Prangishvili D, Garrett RA. 2004. Exceptionally diverse morphotypes and genomes of crenarchaeal hyperthermophilic viruses. Biochem. Soc. Trans. 32:204-208.
    • (2004) Biochem. Soc. Trans. , vol.32 , pp. 204-208
    • Prangishvili, D.1    Garrett, R.A.2
  • 55
    • 27144541842 scopus 로고    scopus 로고
    • Viruses of hyperthermophilic Crenarchaea
    • Prangishvili D, Garrett RA. 2005. Viruses of hyperthermophilic Crenarchaea. Trends Microbiol. 13:535-542.
    • (2005) Trends Microbiol , vol.13 , pp. 535-542
    • Prangishvili, D.1    Garrett, R.A.2
  • 56
    • 33645087247 scopus 로고    scopus 로고
    • Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life
    • Prangishvili D, Garrett RA, Koonin EV. 2006. Evolutionary genomics of archaeal viruses: unique viral genomes in the third domain of life. Virus Res. 117:52-67.
    • (2006) Virus Res , vol.117 , pp. 52-67
    • Prangishvili, D.1    Garrett, R.A.2    Koonin, E.V.3
  • 57
    • 67649327176 scopus 로고    scopus 로고
    • FastTree: computing large minimum evolution trees with profiles instead of a distance matrix
    • Price MN, Dehal PS, Arkin AP. 2009. FastTree: computing large minimum evolution trees with profiles instead of a distance matrix. Mol. Biol. Evol. 26:1641-1650.
    • (2009) Mol. Biol. Evol. , vol.26 , pp. 1641-1650
    • Price, M.N.1    Dehal, P.S.2    Arkin, A.P.3
  • 59
    • 0035818531 scopus 로고    scopus 로고
    • Viruses from extreme thermal environments
    • Rice G, et al. 2001. Viruses from extreme thermal environments. Proc. Natl. Acad. Sci. U. S. A. 98:13341-13345.
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 13341-13345
    • Rice, G.1
  • 60
    • 77952670727 scopus 로고    scopus 로고
    • Viral and microbial community dynamics in four aquatic environments
    • Rodriguez-Brito B, et al. 2010. Viral and microbial community dynamics in four aquatic environments. ISME J. 4:739-751.
    • (2010) ISME J , vol.4 , pp. 739-751
    • Rodriguez-Brito, B.1
  • 61
    • 0028318586 scopus 로고
    • Reconstitution of Flock House provirions: a model system for studying structure and assembly
    • Schneemann A, Gallagher TM, Rueckert RR. 1994. Reconstitution of Flock House provirions: a model system for studying structure and assembly. J. Virol. 68:4547-4556.
    • (1994) J. Virol. , vol.68 , pp. 4547-4556
    • Schneemann, A.1    Gallagher, T.M.2    Rueckert, R.R.3
  • 62
    • 0031658922 scopus 로고    scopus 로고
    • Specific encapsidation of nodavirus RNAs is mediated through the C terminus of capsid precursor protein alpha
    • Schneemann A, Marshall D. 1998. Specific encapsidation of nodavirus RNAs is mediated through the C terminus of capsid precursor protein alpha. J. Virol. 72:8738-8746.
    • (1998) J. Virol. , vol.72 , pp. 8738-8746
    • Schneemann, A.1    Marshall, D.2
  • 63
    • 0026757341 scopus 로고
    • Maturation cleavage required for infectivity of a nodavirus
    • Schneemann A, Zhong W, Gallagher TM, Rueckert RR. 1992. Maturation cleavage required for infectivity of a nodavirus. J. Virol. 66:6728-6734.
    • (1992) J. Virol. , vol.66 , pp. 6728-6734
    • Schneemann, A.1    Zhong, W.2    Gallagher, T.M.3    Rueckert, R.R.4
  • 64
    • 78149449833 scopus 로고    scopus 로고
    • Use of cellular CRISPR (clusters of regularly interspaced short palindromic repeats) spacer-based microarrays for detection of viruses in environmental samples
    • Snyder JC, Bateson MM, Lavin M, Young MJ. 2010. Use of cellular CRISPR (clusters of regularly interspaced short palindromic repeats) spacer-based microarrays for detection of viruses in environmental samples. Appl. Environ. Microbiol. 76:7251-7258.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 7251-7258
    • Snyder, J.C.1    Bateson, M.M.2    Lavin, M.3    Young, M.J.4
  • 65
    • 0141518169 scopus 로고    scopus 로고
    • Viruses of hyperthermophilic Archaea
    • Snyder JC, et al. 2003. Viruses of hyperthermophilic Archaea. Res. Microbiol. 154:474-482.
    • (2003) Res. Microbiol. , vol.154 , pp. 474-482
    • Snyder, J.C.1
  • 66
    • 16344373015 scopus 로고    scopus 로고
    • Protein homology detection by HMM-HMM comparison
    • Soding J. 2005. Protein homology detection by HMM-HMM comparison. Bioinformatics 21:951-960.
    • (2005) Bioinformatics , vol.21 , pp. 951-960
    • Soding, J.1
  • 67
    • 23144452044 scopus 로고    scopus 로고
    • The HHpred interactive server for protein homology detection and structure prediction
    • Soding J, Biegert A, Lupas AN. 2005. The HHpred interactive server for protein homology detection and structure prediction. Nucleic Acids Res. 33:W244-W248.
    • (2005) Nucleic Acids Res , vol.33
    • Soding, J.1    Biegert, A.2    Lupas, A.N.3
  • 68
    • 39149142575 scopus 로고    scopus 로고
    • CRISPR-a widespread system that provides acquired resistance against phages in bacteria and archaea
    • Sorek R, Kunin V, Hugenholtz P. 2008. CRISPR-a widespread system that provides acquired resistance against phages in bacteria and archaea. Nat. Rev. Microbiol. 6:181-186.
    • (2008) Nat. Rev. Microbiol. , vol.6 , pp. 181-186
    • Sorek, R.1    Kunin, V.2    Hugenholtz, P.3
  • 69
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML Web servers
    • Stamatakis A, Hoover P, Rougemont J. 2008. A rapid bootstrap algorithm for the RAxML Web servers. Syst. Biol. 57:758-771.
    • (2008) Syst. Biol. , vol.57 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 70
    • 25144506135 scopus 로고    scopus 로고
    • Viruses in the sea
    • Suttle CA. 2005. Viruses in the sea. Nature 437:356-361.
    • (2005) Nature , vol.437 , pp. 356-361
    • Suttle, C.A.1
  • 71
  • 72
    • 11144354360 scopus 로고    scopus 로고
    • Environmental genome shotgun sequencing of the Sargasso Sea
    • Venter JC, et al. 2004. Environmental genome shotgun sequencing of the Sargasso Sea. Science 304:66-74.
    • (2004) Science , vol.304 , pp. 66-74
    • Venter, J.C.1
  • 73
    • 1942486000 scopus 로고    scopus 로고
    • Ecology of prokaryotic viruses
    • Weinbauer MG. 2004. Ecology of prokaryotic viruses. FEMS Microbiol. Rev. 28:127-181.
    • (2004) FEMS Microbiol. Rev. , vol.28 , pp. 127-181
    • Weinbauer, M.G.1
  • 74
    • 43149087336 scopus 로고    scopus 로고
    • Structural insights into mechanisms of catalysis and inhibition in Norwalk virus polymerase
    • Zamyatkin DF, et al. 2008. Structural insights into mechanisms of catalysis and inhibition in Norwalk virus polymerase. J. Biol. Chem. 283:7705-7712.
    • (2008) J. Biol. Chem. , vol.283 , pp. 7705-7712
    • Zamyatkin, D.F.1
  • 75
    • 0028321381 scopus 로고
    • Capsid assembly in a family of animal viruses primes an autoproteolytic maturation that depends on a single aspartic acid residue
    • Zlotnick A, et al. 1994. Capsid assembly in a family of animal viruses primes an autoproteolytic maturation that depends on a single aspartic acid residue. J. Biol. Chem. 269:13680-13684.
    • (1994) J. Biol. Chem. , vol.269 , pp. 13680-13684
    • Zlotnick, A.1


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