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Volumn 185, Issue 20, 2003, Pages 6220-6223

Metagenomic analyses of an uncultured viral community from human feces

Author keywords

[No Author keywords available]

Indexed keywords

ADULT; ARTICLE; BACTERIOPHAGE; CASE REPORT; ENTERIC VIRUS; FECES; GENE SEQUENCE; GENETIC ANALYSIS; GENOTYPE; HUMAN; HUMAN EXPERIMENT; INTESTINE FLORA; MALE; NORMAL HUMAN; PRIORITY JOURNAL; VIRUS GENE; VIRUS GENOME;

EID: 0141891348     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.185.20.6220-6223.2003     Document Type: Article
Times cited : (609)

References (36)
  • 4
    • 0031767751 scopus 로고    scopus 로고
    • Occurrence of male-specific bacteriophage in feral and domestical animal wastes, human feces, and human-associated wastewaters
    • Calci, K., W. Burkhardt, W. Watkins, and S. Rippey. 1998. Occurrence of male-specific bacteriophage in feral and domestical animal wastes, human feces, and human-associated wastewaters. Appl. Environ. Microbiol. 64:5027-5029.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 5027-5029
    • Calci, K.1    Burkhardt, W.2    Watkins, W.3    Rippey, S.4
  • 6
    • 0000947903 scopus 로고
    • Non-parametric estimation of the number of classes in a population
    • Chao, A. 1984. Non-parametric estimation of the number of classes in a population. Scand. J. Stat. 11:783-791.
    • (1984) Scand. J. Stat. , vol.11 , pp. 783-791
    • Chao, A.1
  • 7
    • 0028483444 scopus 로고
    • Bacteriophages presence in human faeces of healthy subjects and patients with gastrointestinal disturbances
    • Cornax, R., M. Morinigo, F. Gonzalez-Jaen, M. Alonso, and J. Borrego. 1994. Bacteriophages presence in human faeces of healthy subjects and patients with gastrointestinal disturbances. Zentbl. Bakteriol. 281:214-224.
    • (1994) Zentbl. Bakteriol. , vol.281 , pp. 214-224
    • Cornax, R.1    Morinigo, M.2    Gonzalez-Jaen, F.3    Alonso, M.4    Borrego, J.5
  • 8
    • 85157985211 scopus 로고    scopus 로고
    • Mobile genetic elements and bacteria pathogenesis
    • N. L. Craig, R. Gragie, M. Gellert, and A. M. Lambowitz (ed.). ASM Press, Washington, D.C.
    • Davis, B. M., and M. K. Waldor. 2002. Mobile genetic elements and bacteria pathogenesis, p. 1040-1055. In N. L. Craig, R. Gragie, M. Gellert, and A. M. Lambowitz (ed.), Mobile DNA II. ASM Press, Washington, D.C.
    • (2002) Mobile DNA II , pp. 1040-1055
    • Davis, B.M.1    Waldor, M.K.2
  • 9
    • 0003617939 scopus 로고
    • American Society for Microbiology, Washington, D.C.
    • Drasar, B., and P. Barrow. 1985. Intestinal microbiology. American Society for Microbiology, Washington, D.C.
    • (1985) Intestinal Microbiology
    • Drasar, B.1    Barrow, P.2
  • 10
    • 0012844141 scopus 로고    scopus 로고
    • Prokaryotic and viral diversity patterns in marine plankton
    • Fuhrman, J. A., J. F. Griffith, and M. S. Schwalbach. 2002. Prokaryotic and viral diversity patterns in marine plankton. Ecol. Res. 17:183-194.
    • (2002) Ecol. Res. , vol.17 , pp. 183-194
    • Fuhrman, J.A.1    Griffith, J.F.2    Schwalbach, M.S.3
  • 11
    • 0020512991 scopus 로고
    • Bacteriophage distribution in human faeces: Continuous survey of healthy subjects and patients with internal and leukemic diseases
    • Furuse, K., S. Osawa, J. Kawashiro, R. Tanaka, Z. Osawa, S. Sawamura, Y. Yanagawa, T. Nagao, and I. Watanabe. 1983. Bacteriophage distribution in human faeces: continuous survey of healthy subjects and patients with internal and leukemic diseases. J. Gen. Virol. 64:2039-2043.
    • (1983) J. Gen. Virol. , vol.64 , pp. 2039-2043
    • Furuse, K.1    Osawa, S.2    Kawashiro, J.3    Tanaka, R.4    Osawa, Z.5    Sawamura, S.6    Yanagawa, Y.7    Nagao, T.8    Watanabe, I.9
  • 12
    • 0036266303 scopus 로고    scopus 로고
    • Bacteroides fragilis and Escherichia coli bacteriophages in human faeces
    • Gantzer, C., J. Henny, and L. Schwartzbrod. 2002. Bacteroides fragilis and Escherichia coli bacteriophages in human faeces. Int. J. Hyg. Environ. Health 205:325-328.
    • (2002) Int. J. Hyg. Environ. Health , vol.205 , pp. 325-328
    • Gantzer, C.1    Henny, J.2    Schwartzbrod, L.3
  • 13
    • 0011082483 scopus 로고
    • Research on bacteriophages as indicators of water quality
    • Water Research Commission, Pretoria, South Africa
    • Grabow, W., C. Holtzhausen, and C. De Villiers. 1993. Research on bacteriophages as indicators of water quality. Water Research Commission report N 321/1/93, p. 147. Water Research Commission, Pretoria, South Africa.
    • (1993) Water Research Commission Report N 321/1/93 , pp. 147
    • Grabow, W.1    Holtzhausen, C.2    De Villiers, C.3
  • 14
    • 0029038372 scopus 로고
    • Bacteroides fragilis and Escherichia coli bacteriophages: Excretion by humans and animals
    • Grabow, W., T. Neubrech, C. Holtzhausen, and R. Jofre. 1995. Bacteroides fragilis and Escherichia coli bacteriophages: excretion by humans and animals. Water Sci. Technol. 31:223-230.
    • (1995) Water Sci. Technol. , vol.31 , pp. 223-230
    • Grabow, W.1    Neubrech, T.2    Holtzhausen, C.3    Jofre, R.4
  • 15
    • 0036275614 scopus 로고    scopus 로고
    • Extensive set of 16S rRNA-based probes for detection of bacteria in human feces
    • Harmsen, H., G. Raangs, T. He, J. Degener, and G. Welling. 2002. Extensive set of 16S rRNA-based probes for detection of bacteria in human feces. Appl. Environ. Microbiol. 68:2982-2990.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 2982-2990
    • Harmsen, H.1    Raangs, G.2    He, T.3    Degener, J.4    Welling, G.5
  • 16
    • 2142838420 scopus 로고
    • A bacteriophage standard for bathing waters
    • Commission of the European Communities, B4:3040/92/012609. European Commission, Brussels, Belgium
    • Havelaar, A. 1993. A bacteriophage standard for bathing waters. Final report. Commission of the European Communities, B4:3040/92/012609. European Commission, Brussels, Belgium.
    • (1993) Final Report
    • Havelaar, A.1
  • 17
    • 0025061589 scopus 로고
    • F-specific RNA bacteriophages and sensitive host strains in faeces and wastewater of human and animal origin
    • Havelaar, A., W. Pot-Hogeboom, K. Furuse, R. Pot, and M. Hormann. 1990. F-specific RNA bacteriophages and sensitive host strains in faeces and wastewater of human and animal origin. J. Appl. Bacteriol. 69:30-37.
    • (1990) J. Appl. Bacteriol. , vol.69 , pp. 30-37
    • Havelaar, A.1    Pot-Hogeboom, W.2    Furuse, K.3    Pot, R.4    Hormann, M.5
  • 18
    • 0036185771 scopus 로고    scopus 로고
    • Assessment of microbial diversity in human colonic samples by 16S rDNA sequence analysis
    • Hold, G., S. Pryde, V. Russell, E. Furuse, and H. Flint. 2002. Assessment of microbial diversity in human colonic samples by 16S rDNA sequence analysis. FEMS Microbiol. Ecol. 39:33-39.
    • (2002) FEMS Microbiol. Ecol. , vol.39 , pp. 33-39
    • Hold, G.1    Pryde, S.2    Russell, V.3    Furuse, E.4    Flint, H.5
  • 19
    • 0022178371 scopus 로고
    • Bacteroides bacteriophages isolated from human faeces
    • Kai, S., S. Watanabe, K. Furuse, and A. Osawa. 1985. Bacteroides bacteriophages isolated from human faeces. Microbiol. Immunol. 29:895-899.
    • (1985) Microbiol. Immunol. , vol.29 , pp. 895-899
    • Kai, S.1    Watanabe, S.2    Furuse, K.3    Osawa, A.4
  • 20
    • 0345493827 scopus 로고    scopus 로고
    • Characterization of wild lambdoid bacteriophages: Detection of a wide distribution of phage immunity groups and identification of a Nus-dependent, nonlambdoid phage group
    • Kameyama, L., L. Fernandez, J. Calderon, A. Ortiz-Rojas, and T. Patterson. 1999. Characterization of wild lambdoid bacteriophages: detection of a wide distribution of phage immunity groups and identification of a Nus-dependent, nonlambdoid phage group. Virology 263:100-111.
    • (1999) Virology , vol.263 , pp. 100-111
    • Kameyama, L.1    Fernandez, L.2    Calderon, J.3    Ortiz-Rojas, A.4    Patterson, T.5
  • 21
    • 0027279670 scopus 로고
    • Estimation of ruminal bacteriophage numbers by pulsed-field gel electrophoresis and laser densitometry
    • Klieve, A. V., and R. A. Swain. 1993. Estimation of ruminal bacteriophage numbers by pulsed-field gel electrophoresis and laser densitometry. Appl. Environ. Microbiol. 59:2299-2303.
    • (1993) Appl. Environ. Microbiol. , vol.59 , pp. 2299-2303
    • Klieve, A.V.1    Swain, R.A.2
  • 22
    • 0036841520 scopus 로고    scopus 로고
    • Development of 16S rRNA-gene-targeted group-specific primers for the detection and identification of predominant bacteria in human feces
    • Matsuki, T., K. Watanabe, J. Fujimoto, Y. Miyamoto, T. Takada, K. Matsumoto, H. Oyaizu, and R. Tanaka. 2002. Development of 16S rRNA-gene-targeted group-specific primers for the detection and identification of predominant bacteria in human feces. Appl. Environ. Microbiol. 68:5445-5451.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5445-5451
    • Matsuki, T.1    Watanabe, K.2    Fujimoto, J.3    Miyamoto, Y.4    Takada, T.5    Matsumoto, K.6    Oyaizu, H.7    Tanaka, R.8
  • 23
    • 0016167941 scopus 로고
    • Human fecal flora: The normal flora of 20 Japanese-Hawaiians
    • Moore, W., and L. Holdeman. 1974. Human fecal flora: the normal flora of 20 Japanese-Hawaiians. Appl. Microbiol. 27:961-979.
    • (1974) Appl. Microbiol. , vol.27 , pp. 961-979
    • Moore, W.1    Holdeman, L.2
  • 24
    • 0029084396 scopus 로고
    • Intestinal floras of populations that have a high risk of colon cancer
    • Moore, W., and L. Moore. 1995. Intestinal floras of populations that have a high risk of colon cancer. Appl. Environ. Microbiol., 61:3202-3207
    • (1995) Appl. Environ. Microbiol.. , vol.61 , pp. 3202-3207
    • Moore, W.1    Moore, L.2
  • 25
    • 0347297590 scopus 로고    scopus 로고
    • Application of new primer-enzyme combinations to terminal restriction fragment length polymorphism profiling of bacterial populations in human feces
    • Nagashima K.,T. Hisada, S. Maremi, and J. Mochizuki. 2003. Application of new primer-enzyme combinations to terminal restriction fragment length polymorphism profiling of bacterial populations in human feces. Appl. Environ. Microbiol. 69:1251-1262.
    • (2003) Appl. Environ. Microbiol. , vol.69 , pp. 1251-1262
    • Nagashima, K.1    Hisada, T.2    Maremi, S.3    Mochizuki, J.4
  • 26
    • 0019470325 scopus 로고
    • Distribution of ribonucleic acid coliphages in animals
    • Osawa, A., K. Furuse, and I. Watanabe. 1981. Distribution of ribonucleic acid coliphages in animals. Appl. Environ. Microbiol. 41:164-168.
    • (1981) Appl. Environ. Microbiol. , vol.41 , pp. 164-168
    • Osawa, A.1    Furuse, K.2    Watanabe, I.3
  • 28
    • 0032942011 scopus 로고    scopus 로고
    • Diversity of Bacteroides fragilis strains in their capacity to recover phages from human and animal wastes and from fecally polluted wastewater
    • Puig, A., N. Queralt, J. Jofre, and R. Araujo. 1999. Diversity of Bacteroides fragilis strains in their capacity to recover phages from human and animal wastes and from fecally polluted wastewater. Appl. Environ. Microbiol. 65:1772-1776.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 1772-1776
    • Puig, A.1    Queralt, N.2    Jofre, J.3    Araujo, R.4
  • 29
    • 0037453721 scopus 로고    scopus 로고
    • Global phage diversity
    • Rohwer, F. 2003. Global phage diversity. Cell 113:141.
    • (2003) Cell , vol.113 , pp. 141
    • Rohwer, F.1
  • 30
    • 0034111671 scopus 로고    scopus 로고
    • The complete genomic sequence of the marine phage Roseophage SIO1 shares homology with non-marine phages
    • Rohwer, F., A. M. Segall, G. Steward, V. Seguritan, M. Breitbart, F. Wolven, and F. Azam. 2000. The complete genomic sequence of the marine phage Roseophage SIO1 shares homology with non-marine phages. Limnol. Oceanogr. 42:408-418.
    • (2000) Limnol. Oceanogr. , vol.42 , pp. 408-418
    • Rohwer, F.1    Segall, A.M.2    Steward, G.3    Seguritan, V.4    Breitbart, M.5    Wolven, F.6    Azam, F.7
  • 32
    • 0032755259 scopus 로고    scopus 로고
    • Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut
    • Suau, A., R. Bonnet, M. Sutren, J.-J. Godon, G. R. Gibson, M. D. Collins, and J. Dore. 1999. Direct analysis of genes encoding 16S rRNA from complex communities reveals many novel molecular species within the human gut. Appl. Environ. Microbiol. 65:4799-4807.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 4799-4807
    • Suau, A.1    Bonnet, R.2    Sutren, M.3    Godon, J.-J.4    Gibson, G.R.5    Collins, M.D.6    Dore, J.7
  • 33
    • 0023378298 scopus 로고
    • Bacteriophages active against Bacteroides fragilis in sewage-polluted waters
    • Tartera, C., and R. Jofre. 1987. Bacteriophages active against Bacteroides fragilis in sewage-polluted waters. Appl. Environ. Microbiol. 53:1632-1637.
    • (1987) Appl. Environ. Microbiol. , vol.53 , pp. 1632-1637
    • Tartera, C.1    Jofre, R.2
  • 34
    • 0002058563 scopus 로고    scopus 로고
    • Theoretical models for the control of bacterial growth rate, abundance, diversity and carbon demand
    • Thingstad, T. F., and R. Lignell. 1997. Theoretical models for the control of bacterial growth rate, abundance, diversity and carbon demand. Aquat. Microb. Ecol. 13:19-27.
    • (1997) Aquat. Microb. Ecol. , vol.13 , pp. 19-27
    • Thingstad, T.F.1    Lignell, R.2
  • 35
    • 0036812495 scopus 로고    scopus 로고
    • Development of a membrane-array method for the detection of human intestinal bacterial in fecal samples
    • Wang, R., S.-J. Kim, L. Robertson, and C. Cerniglia. 2002. Development of a membrane-array method for the detection of human intestinal bacterial in fecal samples. Mol. Cell. Probes 16:341-350.
    • (2002) Mol. Cell. Probes , vol.16 , pp. 341-350
    • Wang, R.1    Kim, S.-J.2    Robertson, L.3    Cerniglia, C.4
  • 36
    • 0032959665 scopus 로고    scopus 로고
    • Population dynamics of Chesapeake Bay virioplankton: Total-community analysis by pulsed-field gel electrophoresis
    • Wommack, K. E., J. Ravel, R. T. Hill, J. Chun, and R. R. Colwell. 1999. Population dynamics of Chesapeake Bay virioplankton: total-community analysis by pulsed-field gel electrophoresis. Appl. Environ. Microbiol. 65:231-240.
    • (1999) Appl. Environ. Microbiol. , vol.65 , pp. 231-240
    • Wommack, K.E.1    Ravel, J.2    Hill, R.T.3    Chun, J.4    Colwell, R.R.5


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