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Volumn 68, Issue 10, 2002, Pages 5123-5135

Microbial composition of near-boiling silica-depositing thermal springs throughout Yellowstone National Park

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA; DNA; FLUORESCENCE; GENES; SCANNING ELECTRON MICROSCOPY; SILICA;

EID: 0036793770     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.68.10.5123-5135.2002     Document Type: Article
Times cited : (149)

References (34)
  • 1
    • 0001228401 scopus 로고
    • Character-state weighting for cladistic analysis of protein-coding DNA sequences
    • Albert, V. A., M. W. Chase, and B. D. Mishler. 1993. Character-state weighting for cladistic analysis of protein-coding DNA sequences. Ann. Missouri Bot. Gard. 80:752-766.
    • (1993) Ann. Missouri Bot. Gard. , vol.80 , pp. 752-766
    • Albert, V.A.1    Chase, M.W.2    Mishler, B.D.3
  • 3
    • 0029832927 scopus 로고    scopus 로고
    • Perspectives on archaeal diversity, thermophily and monophyly from environmental rDNA sequences
    • Barns, S. M., C. F. Delwiche, J. D. Palmer, and N. R. Pace. 1996. Perspectives on archaeal diversity, thermophily and monophyly from environmental rDNA sequences. Proc. Natl. Acad. Sci. USA 93:9188-9193.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 9188-9193
    • Barns, S.M.1    Delwiche, C.F.2    Palmer, J.D.3    Pace, N.R.4
  • 4
    • 0028343555 scopus 로고
    • Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment
    • Barns, S. M., R. E. Fundyga, M. W. Jeffries, and N. R. Pace. 1994. Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment. Proc. Natl. Acad. Sci. USA 91:1609-1613.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 1609-1613
    • Barns, S.M.1    Fundyga, R.E.2    Jeffries, M.W.3    Pace, N.R.4
  • 6
    • 0030321833 scopus 로고    scopus 로고
    • Fossilization processes in siliceous thermal springs: Trends in preservation along thermal gradients in evolution of hydrothermal ecosystems on Earth (and Mars?)
    • Cady, S. L., and J. D. Farmer. 1996. Fossilization processes in siliceous thermal springs: trends in preservation along thermal gradients in evolution of hydrothermal ecosystems on Earth (and Mars?). Ciba Found. Symp. 202:150-173.
    • (1996) Ciba Found. Symp. , vol.202 , pp. 150-173
    • Cady, S.L.1    Farmer, J.D.2
  • 7
    • 0028457465 scopus 로고
    • The effects of sequence length, tree topology, and number of taxa on the performance of phylogenetic methods
    • Charleston, M. A., M. D. Hendy, and D. Penny. 1994. The effects of sequence length, tree topology, and number of taxa on the performance of phylogenetic methods. J. Comput. Biol. 1:133-151.
    • (1994) J. Comput. Biol. , vol.1 , pp. 133-151
    • Charleston, M.A.1    Hendy, M.D.2    Penny, D.3
  • 8
    • 84959798530 scopus 로고
    • Cases in which parsimony or compatibility methods will be positively misleading
    • Felsenstein, J. 1978. Cases in which parsimony or compatibility methods will be positively misleading. Syst. Zool. 27:401-410.
    • (1978) Syst. Zool. , vol.27 , pp. 401-410
    • Felsenstein, J.1
  • 9
    • 0022557634 scopus 로고
    • Iron-silica crystallite nucleation by bacteria in a geothermal sediment
    • Ferris, F. G., T. J. Beveridge, and W. S. Fyfe. 1986. Iron-silica crystallite nucleation by bacteria in a geothermal sediment. Nature 320:609-611.
    • (1986) Nature , vol.320 , pp. 609-611
    • Ferris, F.G.1    Beveridge, T.J.2    Fyfe, W.S.3
  • 10
    • 0000084234 scopus 로고
    • A framework for the quantitative study of evolutionary trees
    • Hendy, M. D., and D. Penny. 1989. A framework for the quantitative study of evolutionary trees. Syst. Zool. 38:297-309.
    • (1989) Syst. Zool. , vol.38 , pp. 297-309
    • Hendy, M.D.1    Penny, D.2
  • 11
    • 0034888898 scopus 로고    scopus 로고
    • Species composition of cultivated and noncultivated bacteria from short filaments in an Icelandic hot spring
    • Hjorleifsdottir, S., S. Skirnisdottir, G. O. Hreggvidsoon, O. Holst, and J. K. Kristjansson. 2001. Species composition of cultivated and noncultivated bacteria from short filaments in an Icelandic hot spring. Microb. Ecol. 42:117-125.
    • (2001) Microb. Ecol. , vol.42 , pp. 117-125
    • Hjorleifsdottir, S.1    Skirnisdottir, S.2    Hreggvidsoon, G.O.3    Holst, O.4    Kristjansson, J.K.5
  • 12
    • 0031685977 scopus 로고    scopus 로고
    • Thermocrinis ruber gen. nov., sp. nov., a pink-filament-forming hyperthermophilic bacterium isolated from Yellowstone National Park
    • Huber, R., W. Eder, S. Heldwein, G. Wanner, H. Huber, R. Rachel, and K. O. Stetter. 1998. Thermocrinis ruber gen. nov., sp. nov., a pink-filament-forming hyperthermophilic bacterium isolated from Yellowstone National Park. Appl. Environ. Microbiol. 64:3576-3583.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 3576-3583
    • Huber, R.1    Eder, W.2    Heldwein, S.3    Wanner, G.4    Huber, H.5    Rachel, R.6    Stetter, K.O.7
  • 13
    • 0031912606 scopus 로고    scopus 로고
    • Novel division level bacterial diversity in a Yellowstone hot spring
    • Hugenholtz, P., C. Pitulle, K. L. Hershberger, and N. R. Pace. 1998. Novel division level bacterial diversity in a Yellowstone hot spring. J. Bacteriol. 180:366-376.
    • (1998) J. Bacteriol. , vol.180 , pp. 366-376
    • Hugenholtz, P.1    Pitulle, C.2    Hershberger, K.L.3    Pace, N.R.4
  • 14
    • 0030829090 scopus 로고    scopus 로고
    • Microbial participation in the formation of siliceous deposits from geothermal water and analysis of the extremely thermophilic bacterial community
    • Inagaki, F., S. Hayashi, K. Doi, Y. Motomura, E. Izawa, and S. Ogata. 1997. Microbial participation in the formation of siliceous deposits from geothermal water and analysis of the extremely thermophilic bacterial community. FEMS Microbiol. Ecol. 24:41-48.
    • (1997) FEMS Microbiol. Ecol. , vol.24 , pp. 41-48
    • Inagaki, F.1    Hayashi, S.2    Doi, K.3    Motomura, Y.4    Izawa, E.5    Ogata, S.6
  • 15
    • 0035512204 scopus 로고    scopus 로고
    • Signature lipids and stable carbon isotope analyses of Octopus Spring hyperthermophilic communities compared with those of Aquificales representatives
    • Jahnke, L. L., W. Eder, R. Huber, J. M. Hope, K.-I. Hinrichs, J. M. Hayes, D. J. Des Marais, S. L. Cady, and R. E. Summons. 2001. Signature lipids and stable carbon isotope analyses of Octopus Spring hyperthermophilic communities compared with those of Aquificales representatives. Appl. Environ. Microbiol. 67:5179-5189.
    • (2001) Appl. Environ. Microbiol. , vol.67 , pp. 5179-5189
    • Jahnke, L.L.1    Eder, W.2    Huber, R.3    Hope, J.M.4    Hinrichs, K.-I.5    Hayes, J.M.6    Des Marais, D.J.7    Cady, S.L.8    Summons, R.E.9
  • 16
    • 0029751366 scopus 로고    scopus 로고
    • Influence of thermophilic bacteria on calcite and silica precipitation in hot springs with water temperatures above 90°C: Evidence from Kenya and New Zealand
    • Jones, B., and R. W. Renaut. 1996. Influence of thermophilic bacteria on calcite and silica precipitation in hot springs with water temperatures above 90°C: evidence from Kenya and New Zealand. Can. J. Earth Sci. 33:72-83.
    • (1996) Can. J. Earth Sci. , vol.33 , pp. 72-83
    • Jones, B.1    Renaut, R.W.2
  • 17
    • 0001496784 scopus 로고    scopus 로고
    • Formation of silica oncoids around geysers and hot springs at El Tatio, northern Chile
    • Jones, B., and R. W. Renaut. 1997. Formation of silica oncoids around geysers and hot springs at El Tatio, northern Chile. Sedimentology 44:287-304.
    • (1997) Sedimentology , vol.44 , pp. 287-304
    • Jones, B.1    Renaut, R.W.2
  • 18
    • 0031436624 scopus 로고    scopus 로고
    • Vertical zonation of biota in microstromatolites associated with Hot Springs, North Island, New Zealand
    • Jones, B., R. W. Renaut, and M. R. Rosen. 1997. Vertical zonation of biota in microstromatolites associated with Hot Springs, North Island, New Zealand. Palaios 12:220-236.
    • (1997) Palaios , vol.12 , pp. 220-236
    • Jones, B.1    Renaut, R.W.2    Rosen, M.R.3
  • 19
    • 0030917895 scopus 로고    scopus 로고
    • Biogenicity of silica precipitation around geysers and hot-spring vents, North Island, New Zealand
    • Jones, B., R. W. Renaut, and M. R. Rosen. 1997. Biogenicity of silica precipitation around geysers and hot-spring vents, North Island, New Zealand. J. Sediment. Res. 67:88-104.
    • (1997) J. Sediment. Res. , vol.67 , pp. 88-104
    • Jones, B.1    Renaut, R.W.2    Rosen, M.R.3
  • 20
    • 0029756244 scopus 로고    scopus 로고
    • Diversity of iron and silica precipitation by microbial mats in hydrothermal waters, Iceland: Implications for Precambrian iron formations
    • Konhauser, K. O., and F. G. Ferris. 1996. Diversity of iron and silica precipitation by microbial mats in hydrothermal waters, Iceland: implications for Precambrian iron formations. Geology 24:323-326.
    • (1996) Geology , vol.24 , pp. 323-326
    • Konhauser, K.O.1    Ferris, F.G.2
  • 21
    • 0001857117 scopus 로고
    • 16S/23S rRNA sequencing
    • E. Stackebrandt and M. Goodfellow (ed.). John Wiley and Sons, New York, N.Y.
    • Lane, D. J. 1991. 16S/23S rRNA sequencing, p. 115-175. In E. Stackebrandt and M. Goodfellow (ed.), Nucleic acid techniques in bacterial systematics. John Wiley and Sons, New York, N.Y.
    • (1991) Nucleic acid techniques in bacterial systematics , pp. 115-175
    • Lane, D.J.1
  • 22
    • 0027957393 scopus 로고
    • FastDNAml: A tool for construction of phylogenetic trees of DNA sequences using maximum likelihood
    • Olsen, G. J., H. Matsuda, R. Hagstrom, and R. Overbeek. 1994. FastDNAml: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood. Comput. Appl. Biosci. 10:41-48.
    • (1994) Comput. Appl. Biosci. , vol.10 , pp. 41-48
    • Olsen, G.J.1    Matsuda, H.2    Hagstrom, R.3    Overbeek, R.4
  • 23
    • 0030431120 scopus 로고    scopus 로고
    • Primary silica oncoids from Orakeikorako Hot Springs, North Island, New Zealand
    • Renaut, R. W., B. Jones, and M. R. Rosen. 1996. Primary silica oncoids from Orakeikorako Hot Springs, North Island, New Zealand. Palaios 11:446-458.
    • (1996) Palaios , vol.11 , pp. 446-458
    • Renaut, R.W.1    Jones, B.2    Rosen, M.R.3
  • 24
    • 0034013150 scopus 로고    scopus 로고
    • Microbial diversity at 83°C in Calcite Springs, Yellowstone National Park: Another environment where the Aquificales and "Korarchaeota" coexist
    • Reysenbach, A. L., M. Ehringer, and K. Hershberger. 2000. Microbial diversity at 83°C in Calcite Springs, Yellowstone National Park: Another environment where the Aquificales and "Korarchaeota" coexist. Extremophiles 4:61-67.
    • (2000) Extremophiles , vol.4 , pp. 61-67
    • Reysenbach, A.L.1    Ehringer, M.2    Hershberger, K.3
  • 25
    • 0028308089 scopus 로고
    • Phylogenetic analysis of the hyperthermophilic pink filament community in Octopus Spring, Yellowstone National Park
    • Reysenbach, A. L., G. S. Whickham, and N. R. Pace. 1994. Phylogenetic analysis of the hyperthermophilic pink filament community in Octopus Spring, Yellowstone National Park. Appl. Environ. Microbiol 60:2113-2119.
    • (1994) Appl. Environ. Microbiol. , vol.60 , pp. 2113-2119
    • Reysenbach, A.L.1    Whickham, G.S.2    Pace, N.R.3
  • 26
    • 84959816047 scopus 로고
    • A theoretical study of the underestimation of branch lengths by the maximum parsimony principle
    • Saitou, N. 1989. A theoretical study of the underestimation of branch lengths by the maximum parsimony principle. Syst. Zool. 38:1-6.
    • (1989) Syst. Zool. , vol.38 , pp. 1-6
    • Saitou, N.1
  • 27
    • 0029518751 scopus 로고
    • In situ silicification of an Icelandic hot spring microbial mat: Implications for microfossil formation
    • Schultze-Lam, S., F. G. Ferris, K. O. Konhauser, and R. G. Wiese. 1995. In situ silicification of an Icelandic hot spring microbial mat: implications for microfossil formation. Can. J. Earth Sci. 32:2021-2026.
    • (1995) Can. J. Earth Sci. , vol.32 , pp. 2021-2026
    • Schultze-Lam, S.1    Ferris, F.G.2    Konhauser, K.O.3    Wiese, R.G.4
  • 28
    • 2142746116 scopus 로고
    • Montana, earthquake of August 17, 1959. U.S. Geological Survey professional paper no. 435. U.S. Geological Survey, Reston, Va.
    • Scott, R. C. 1964. Records of post earthquake chemical quality of groundwater in Hegben Lake, Montana, earthquake of August 17, 1959, p. 179-184. U.S. Geological Survey professional paper no. 435. U.S. Geological Survey, Reston, Va.
    • (1964) Records of post earthquake chemical quality of groundwater in Hegben Lake , pp. 179-184
    • Scott, R.C.1
  • 32
  • 34
    • 0031833974 scopus 로고    scopus 로고
    • Phylogenetic evidence for the existence of novel thermophilic bacteria in hot spring sulfur-turf microbial mats in Japan
    • Yamamoto, H., A. Hiraishi, K. Kato, H. X. Chiura, Y. Maki, and A. Shimizu. 1998. Phylogenetic evidence for the existence of novel thermophilic bacteria in hot spring sulfur-turf microbial mats in Japan. Appl. Environ. Microbiol. 64:1680-1687.
    • (1998) Appl. Environ. Microbiol. , vol.64 , pp. 1680-1687
    • Yamamoto, H.1    Hiraishi, A.2    Kato, K.3    Chiura, H.X.4    Maki, Y.5    Shimizu, A.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.