Developments in the CCP4 molecular-graphics project

Acta Crystallographica Section D: Biological Crystallography

Volumn 60, Issue 12 I, 2004, Pages 2288-2294

  Potterton, Liz ^a   McNicholas, Stuart ^a   Krissinel, Eugene ^b   Gruber, Jan ^c   Cowtan, Kevin ^a   Emsley, Paul ^a   Murshudov, Garib N ^a   Cohen, Serge ^d   Perrakis, Anastassis ^d   Noble, Martin ^c  

^a UNIVERSITY OF YORK   (United Kingdom)

^b EUROPEAN BIOINFORMATICS INSTITUTE   (United Kingdom)

^c UNIVERSITY OF OXFORD   (United Kingdom)

^d NETHERLANDS CANCER INSTITUTE   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

LIGAND; NUCLEIC ACID; PEPTIDE LIBRARY; PROTEIN;

ALGORITHM; ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; COMPUTER GRAPHICS; COMPUTER INTERFACE; COMPUTER PROGRAM; ELECTRICITY; ELECTRON; PROTEIN SECONDARY STRUCTURE; X RAY CRYSTALLOGRAPHY;

ALGORITHMS; COMPUTER GRAPHICS; CRYSTALLOGRAPHY, X-RAY; ELECTRONS; ELECTROSTATICS; LIGANDS; MODELS, MOLECULAR; NUCLEIC ACIDS; PEPTIDE LIBRARY; PROTEIN STRUCTURE, SECONDARY; PROTEINS; SOFTWARE; USER-COMPUTER INTERFACE;

EID: 16644397843     PISSN: 09074449     EISSN: None     Source Type: Journal    
DOI: 10.1107/S0907444904023716     Document Type: Article

References (30)

1. Carson, M. (1997). Methods Enzymol. 277, 493-505.
2. Christopher, J. A., Swanson, R. & Baldwin, T. O. (1996). Comput. Chem. 20, 339-345.
3. Cowtan, K. (2003). IUCr Comput. Commission Newsl. 2, 4-9.
4. DeLano, W. L. (2002). The PyMOL Molecular Graphics System. San Carlos, CA, USA: DeLano Scientific.
5. Emsley, P. & Cowtan, K. (2004). Acta Cryst. D60, 2126-2132.
6. Esnouf, R. M. (1997). Acta Cryst. D53, 665-672.
7. Esnouf, R. M. (1999). Acta Cryst. D55, 938-940.
8. Gloster, T., Williams, S. J., Tarling, C. A., Roberts, S., Dupont, C., Jodoin, P., Shareck, F., Withers, S. G. & Davies, G. J. (2003). Chem. Commun, pp. 945-948.
9. Goodford, P. J. (1985). J. Med. Chem. 28, 849-578.
10. Greer, J. (1985). Methods Enzymol. 115, 206-224.
11. Guex, N. & Peitsch, M. C. (1997). Electrophoresis, 18, 2714-2723.
12. Hartshorn, M. J. (2002). J. Comput. Aided Mol. Des. 16, 871-881.
13. Jones, T. A. (1978). J. Appl. Cryst. 11, 268-272.
14. Jones, T. A. & Kjeldgaard, M. (1994). Proceedings of the CCP4 Study Weekend. From First Map To Final Model, edited by S. Bailey, D. Hubbard & R. Waller, pp. 1-13. Warrington: Daresbury Laboratory.
15. Jones, T. A. & Kleywegt, G. J. (1995). Structure, 3, 535-540.
16. Jones, T. A., Zou, Y. J., Cowan, S. W. & Kjeldgaard, M. (1991). Acta Cryst. A47, 110-119.
17. Kraulis, P. J. (1991). J. Appl. Cryst. 24, 946-950.
18. Krissinel, E. B. & Henrick, K. (2004). Acta Cryst. D60, 2256-2268.
19. Krissinel, E. B., Winn, M. D., Ballard, C. C., Ashton, A. W., Patel, P., Potterton, E. A., McNicholas, S. J., Cowtan, K. D. & Emsley, P. (2004). Acta Cryst. D60, 2250-2255.
20. Laskowski, R. A., MacArthur, M. W., Moss, D. S. & Thornton, J. M. (1993). J. Appl. Cryst. 26, 283-291.
21. McRee, D. E. (1999). J. Struct. Biol. 125, 156-165.
22. Martz, E. (2002). Trends Biochem. Sci. 27, 107-109.
23. Merritt, E. A. & Bacon, D. J. (1997). Methods Enzymol. 227, 505-524.
24. Mitchell, E. M., Artymiuk, P. J., Rice, D. W. & Willett, P. (1989). J. Mol. Biol. 212, 151-166.
25. Murshudov, G. N., Vagin, A. A. & Dodson, E. J. (1997). Acta Cryst. D53, 240-255.
26. Nicholls, A., Sharp, K. A. & Honig, B. (1991). Proteins, 11, 281-296.
27. Oldfield, T. J. (2001). Acta Cryst. D57, 82-94.
28. Potterton, E., Briggs, P., Turkenburg, M. & Dodson, E. (2003). Acta Cryst. D59, 1131-1137.
29. Turk, D. (2001). Methods in Macromolecular Crystallography, edited by D. Turk & L. Johnson, pp. 148-155. Amsterdam: IOS Press.
30. Vriend, G. (1990). J. Mol Graph. 8, 52-56.