Extracellular and intracellular polyphenol oxidases cause opposite effects on sensitivity of Streptomyces to phenolics: A case of double-edged sword

PLoS ONE

Volumn 4, Issue 10, 2009, Pages

  Yang, Han Yu ^a   Chen, Carton W ^a  

^a Institute of Genome Sciences   (Taiwan)

Author keywords

[No Author keywords available]

Indexed keywords

MONOPHENOL MONOOXYGENASE; PHENOL DERIVATIVE; PROTEIN MELC; PROTEIN MELD; QUINONE DERIVATIVE; REACTIVE OXYGEN METABOLITE; UNCLASSIFIED DRUG; BACTERIAL PROTEIN; CATECHOL OXIDASE; CHAPERONE; MELC1 PROTEIN, STREPTOMYCES; OXYGEN; PHENOL; TRANSACTIVATOR PROTEIN;

ARTICLE; BACTERIAL CHROMOSOME; BIOINFORMATICS; DNA DAMAGE; ENZYME SUBSTRATE; GENE DELETION; GENE EXPRESSION; GENE FUNCTION; GENE LOCATION; GENE SEQUENCE; GENETIC CONSERVATION; GENETIC STRAIN; HYDROPHOBICITY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPERON; OXIDATION; PHYLOGENY; POLYMERASE CHAIN REACTION; PROTEIN ISOLATION; SENSITIVITY ANALYSIS; STREPTOMYCES; AMINO ACID SEQUENCE; BIOLOGICAL MODEL; BIOLOGY; CHEMISTRY; ENZYME SPECIFICITY; ENZYMOLOGY; GENETICS; METABOLISM; MOLECULAR GENETICS; SENSITIVITY AND SPECIFICITY;

STREPTOMYCES;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; BASE SEQUENCE; CATECHOL OXIDASE; COMPUTATIONAL BIOLOGY; GENE DELETION; MODELS, GENETIC; MOLECULAR CHAPERONES; MOLECULAR SEQUENCE DATA; MONOPHENOL MONOOXYGENASE; OPERON; OXYGEN; PHENOL; SENSITIVITY AND SPECIFICITY; STREPTOMYCES; SUBSTRATE SPECIFICITY; TRANS-ACTIVATORS;

EID: 70449394004     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0007462     Document Type: Article

References (60)

1. Williams ST, Goodfellow M, Alderson G, Wellington EMH, Sneath PHA, et al. (1983) Numerical classification of Streptomyces and related genera. J Gen Microbiol 129: 1743-1813.
2. Arai T, Mikami Y (1972) Chromogenicity of Streptomyces. Appl Microbiol 23: 402-406.
3. Shirling EB, Gottlieb D (1970) Report of the International Streptomyces Project. Five years of collaborative research. In: Prauser H, ed. The Actinomycetales. Jena: Gustav Fischer Verlag. pp 79-89.
4. Leu WM, Chen LY, Liaw LL, Lee YH (1992) Secretion of the Streptomyces tyrosinase is mediated through its trans-activator protein, MelC1. J Biol Chem 267: 20108-20113.
5. Lee Y-HW, Chen B-F, Wu S-Y, Leu W-M, Lin J-J, et al. (1988) A trans-acting gene is required for the phenotypic expression of a tyrosinase gene in Streptomyces. Gene 65: 71-81.
6. Chen LY, Leu WM, Wang KT, Lee YH (1992) Copper transfer and activation of the Streptomyces apotyrosinase are mediated through a complex formation between apotyrosinase and its trans-activator MelC1. J Biol Chem 267: 20100-20107.
7. Schrempf H (1982) Plasmid loss and changes within the chromosomal DNA of Streptomyces reticuli. J Bacteriol 151: 701-707.
8. Schrempf H (1983) Deletion and amplification of DNA sequences in melanin-negative variants of Streptomyces reticuli. Mol Gen Genet 189: 501-505.
9. Gregory KF, Huang JCC (1964) Tyrosinase inheritance in Streptomyces scabies. II. Induction of tyrosinase deficiency by acridine dyes. J Bacteriol 87: 1287-1294.
10. Yu TW, Chen CW (1993) The unstable melC operon of Streptomyces antibioticus is codeleted with a Tn4811-homologous locus. J Bacteriol 175: 1847-1852.
11. Claus H, Decker H (2006) Bacterial tyrosinases. Syst Appl Microbiol 29: 3-14.
12. Kirby R (2006) Actinomycetes and lignin degradation. Adv Appl Microbiol 58: 125-168.
13. Lyr H (1962) Detoxification of Heartwood Toxins and Chlorophenols by Higher Fungi. Nature 195: 289-290.
14. Endo K, Kamo K, Hosono K, Beppu T, Ueda K (2001) Characterization of mutants defective in melanogenesis and a gene for tyrosinase of Streptomyces griseus. J Antibiot (Tokyo) 54: 789-796.
15. Suzuki H, Furusho Y, Higashi T, Ohnishi Y, Horinouchi S (2006) A novel o-aminophenol oxidase responsible for formation of the phenoxazinone chromophore of grixazone. J Biol Chem 281: 824-833.
16. Keijser BJ, van Wezel GP, Canters GW, Kieser T, Vijgenboom E (2000) The ram-dependence of Streptomyces lividans differentiation is bypassed by copper. J Mol Microbiol Biotechnol 2: 565-574.
17. Ueda K, Endo K, Takano H, Nishimoto M, Kido Y, et al. (2000) Carbon-source-dependent transcriptional control involved in the initiation of cellular differentiation in Streptomyces griseus. Antonie Van Leeuwenhoek 78: 263-268.
18. Ueda K, Tomaru Y, Endoh K, Beppu T (1997) Stimulatory effect of copper on antibiotic production and morphological differentiation in Streptomyces tanashiensis. J Antibiot (Tokyo) 50: 693-695.
19. Lin Y-S, Kieser HM, Hopwood DA, Chen CW (1993) The chromosomal DNA of Streptomyces lividans 66 is linear. Mol Microbiol 10: 923-933.
20. Lin Y-S, Chen CW (1997) Instability of artificially circularized chromosomes of Streptomyces lividans. Mol Microbiol 26: 709-719.
21. Zhu D, He X, Zhou X, Deng Z (2005) Expression of the melC operon in several Streptomyces strains is positively regulated by AdpA, an AraC family transcriptional regulator involved in morphological development in Streptomyces coelicolor. J Bacteriol 187: 3180-3187.
22. Chen CW, Yu T-W, Chung H-M, Chou C-F (1992) Discovery and characterization of a new transposable element Tn4811 in Streptomyces lividans 66. J Bacteriol 174: 7762-7769.
23. Crameri R, Hintermann G, Hütter R, Kieser T (1984) Tyrosinase activity in Streptomyces glaucescens is controlled by three chromosomal loci. Can J Microbiol 30: 1058-1067.
24. Kawamoto S, Nakamura M, Yashima S (1993) Cloning, Sequence and Expressin of the Tyrosinase Gene from Streptomyces lavendulae MA406 A-1. Journal of Fermentation and Bioengineering 76: 345-355.
25. Schaerlaekens K, Schierova M, Lammertyn E, Geukens N, Anne J, et al. (2001) Twin-arginine translocation pathway in Streptomyces lividans. J Bacteriol 183: 6727-6732.
26. Widdick DA, Dilks K, Chandra G, Bottrill A, Naldrett M, et al. (2006) The twin-arginine translocation pathway is a major route of protein export in Streptomyces coelicolor. Proc Natl Acad Sci U S A 103: 17927-17932.
27. Leu WM, Wu SY, Lin JJ, Lo SJ, Lee YH (1989) Analysis of the promoter region of the melanin locus from Streptomyces antibioticus. Gene 84: 267-277.
28. Katz E, Betancourt A (1988) Induction of tyrosinase by L-methionine in Streptomyces antibioticus. Can J Microbiol 34: 1297-1303.
29. 2+ on the expression of tyrosinase activity in Streptomyces castaneoglobisporus. J Biochem 120: 1141-1145.
30. Hintermann G, Zatchej M, Huütter R (1985) Cloning and expression of the genetically unstable tyrosinase structural gene from Streptomyces glaucescens. Mol Gen Genet 200: 422-432.
31. Li Y, Kuppusamy P, Zweier JL, TrushMA(1995) ESR evidence for the generation of reactive oxygen species from the copper-mediated oxidation of the benzene metabolite, hydroquinone: role in DNA damage. Chem Biol Interact 94: 101-120.
32. Li Y, Trush MA (1993) DNA damage resulting from the oxidation of hydroquinone by copper: role for a Cu(II)/Cu(I) redox cycle and reactive oxygen generation. Carcinogenesis 14: 1303-1311.
33. Hirakawa K, Oikawa S, Hiraku Y, Hirosawa I, Kawanishi S (2002) Catechol and hydroquinone have different redox properties responsible for their differential DNA-damaging ability. Chem Res Toxicol 15: 76-82.
34. Lerch K, Ettlinger L (1972) Purification and properties of a tyrosinase from Streptomyces glaucescens. Pathol Microbiol (Basel) 38: 23-25.
35. Streffer K, Vijgenboom E, Tepper AWJW, Makower A, Scheller FW, et al. (2001) Determination of phenolic compounds using recombinant tyrosinase from Streptomyces antibioticus. Analytica Chimica Acta 427: 201-210.
36. Orenes-Piñero E, García-Carmona F, Sánchez-Ferrer A (2006) Kinetic characterization of cresolase activity of Streptomyces antibioticus tyrosinase. Enzyme and Microbial Technology 39: 158-163.
37. Toussaint O, Lerch K (1987) Catalytic oxidation of 2-aminophenols and ortho hydroxylation of aromatic amines by tyrosinase. Biochemistry 26: 8567-8571.
38. Conant JB, Fieser LF (1924) Reduction potentials of quinones. II The potentials of certain derivatives of benzoquinon, naphthoquinone and anthraquinone. J Am Chem Soc 46: 1858-1881.
39. Waksman SA, Henrici AT (1948) Family Actinomycetaceae Buchanan and Family Streptomycetaceae Waksman and Henrici. In: Breed EGD, Murrat EGD, Hichens AP, eds. Bergey's Manual of Determinative Bacteriology. Batimore: The Williams & Williams Co. pp 892-980.
40. Li WH, Wu CI, Luo CC (1985) A new method for estimating synonymous and nonsynonymous rates of nucleotide substitution considering the relative likelihood of nucleotide and codon changes. Mol Biol Evol 2: 150-174.
41. Matoba Y, Kumagai T, Yamamoto A, Yoshitsu H, Sugiyama M (2006) Crystallographic evidence that the dinuclear copper center of tyrosinase is flexible during catalysis. J Biol Chem 281: 8981-8990.
42. Bendtsen JD, Nielsen H, Widdick D, Palmer T, Brunak S (2005) Prediction of twin-arginine signal peptides. BMC Bioinformatics 6: 167.
43. Mercado-Blanco J, Garcia F, Fernandez-Lopez M, Olivares J (1993) Melanin production by Rhizobium meliloti GR4 is linked to nonsymbiotic plasmid pRmeGR4b: cloning, sequencing, and expression of the tyrosinase gene mepA. J Bacteriol 175: 5403-5410.
44. Pinero S, Rivera J, Romero D, Cevallos MA, Martinez A, et al. (2007) Tyrosinase from Rhizobium etli is involved in nodulation efficiency and symbiosis-associated stress resistance. J Mol Microbiol Biotechnol 13: 35-44.
45. Mayer AM (2006) Polyphenol oxidases in plants and fungi: going places? A review. Phytochemistry 67: 2318-2331.
46. Thipyapong P, Stout MJ, Attajarusit J (2007) Functional analysis of polyphenol oxidases by antisense/sense technology. Molecules 12: 1569-1595.
47. Thipyapong P, Hunt MD, Steffens JC (2004) Antisense downregulation of polyphenol oxidase results in enhanced disease susceptibility. Planta 220: 105-117.
48. Li L, Steffens JC (2002) Overexpression of polyphenol oxidase in transgenic tomato plants results in enhanced bacterial disease resistance. Planta 215: 239-247.
49. Sambrook J, MacCallum P, Russel D (2001) Molecular cloning. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press.
50. Kieser T, Bibb M, Buttner MJ, Chater KF, Hopwood DA (2000) Practical Streptomyces Genetics. Norwich: The John Innes Foundation. 613 p.
51. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24: 4876-4882.
52. Gust B, Challis GL, Fowler K, Kieser T, Chater KF (2003) PCR-targeted Streptomyces gene replacement identifies a protein domain needed for biosynthesis of the sesquiterpene soil odor geosmin. Proc Natl Acad Sci U S A 100: 1541-1546.
53. Kahn V, Ben-Shalom N, Zakin V (1999) Effect of benzenesulfinic acid on the oxidation of o-dihydroxy- and trihydroxyphenols by mushroom tyrosinase. Journal of Food Biochemistry 23: 263-281.
54. Rozas J, Sanchez-DelBarrio JC, Messeguer X, Rozas R (2003) DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19: 2496-2497.
55. Hsiao NH, Kirby R (2008) Comparative genomics of Streptomyces avermitilis, Streptomyces cattleya, Streptomyces maritimus and Kitasatospora aureofaciens using a Streptomyces coelicolor microarray system. Antonie Van Leeuwenhoek 93: 1-25.
56. Hirochika H, Nakamura K, Sakaguchi K (1985) A linear DNA plasmid from Streptomyces rochei with an inverted repetition of 614 base pairs. EMBO J 3: 761-766.
57. Katz E, Thompson CJ, Hopwood DA (1983) Cloning and expression of the tyrosinase gene from Streptomyces antibioticus in Streptomyces lividans. J Gen Microbiol 129: 2703-2714.
58. Hopwood DA, Kieser T, Wright HM, Bibb MJ (1983) Plasmids, recombination, and chromosomal mapping in Streptomyces lividans 66. J Gen Microbiol 129: 2257-2269.
59. Kieser HM, Kieser T, Hopwood DA (1992) A combined genetic and physical map of the Streptomyces coelicolor A3(2) chromosome. J Bacteriol 174: 5496-5507.
60. Paget MS, Chamberlin L, Atrih A, Foster SJ, Buttner MJ (1999) Evidence that the extracytoplasmic function sigma factor sigmaE is required for normal cell wall structure in Streptomyces coelicolor A3(2). J Bacteriol 181: 204-211.