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Volumn 48, Issue 3, 2012, Pages 251-260

Tissue-specific selection of stable reference genes for real-time PCR normalization in an obese rat model

Author keywords

[No Author keywords available]

Indexed keywords

BETA ACTIN; CYCLOPHILIN A; GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE; HYPOXANTHINE PHOSPHORIBOSYLTRANSFERASE 1; MESSENGER RNA; POLYMERASE (RNA) II (DNA DIRECTED) POLYPEPTIDE A PROTEIN; PROTEIN; RIBOSOMAL PROTEIN L13A; SUCCINATE DEHYDROGENASE COMPLEX SUBUNIT A FLAVOPROTEIN; TATA BINDING PROTEIN; TRANSFERRIN RECEPTOR; TUMOR NECROSIS FACTOR ALPHA; TYROSINE 3 MONOOXYGENASE; UNCLASSIFIED DRUG;

EID: 84861177753     PISSN: 09525041     EISSN: 14796813     Source Type: Journal    
DOI: 10.1530/JME-12-0024     Document Type: Article
Times cited : (48)

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