-
1
-
-
79953046372
-
Pervasive transcription
-
Abhinaya, A. (2011). Pervasive transcription. Curr Sci 100, 628-630.
-
(2011)
Curr. Sci.
, vol.100
, pp. 628-630
-
-
Abhinaya, A.1
-
2
-
-
0036007675
-
DNA microarray for functional plant genomics
-
Aharoni, A., and Vorst, O. (2001). DNA microarray for functional plant genomics. Plant Mol Biol 48, 99-118.
-
(2001)
Plant. Mol. Biol.
, vol.48
, pp. 99-118
-
-
Aharoni, A.1
Vorst, O.2
-
3
-
-
81455161623
-
Whole genome sequencing of peach (Prunus persica L) for SNP identification and selection
-
Ahmad, R., Parfitt, D.E., Fass, J., Ogundiwin, E., Dhingra, A., Gradziel, T.M., et al. (2011). Whole genome sequencing of peach (Prunus persica L.) for SNP identification and selection. BMC Genomics 12, 569.
-
(2011)
BMC Genomics
, vol.12
, pp. 569
-
-
Ahmad, R.1
Parfitt, D.E.2
Fass, J.3
Ogundiwin, E.4
Dhingra, A.5
Gradziel, T.M.6
-
4
-
-
0025941171
-
From genes to phenotype
-
Alberch, P. (1991). From genes to phenotype. Genetica 84, 5-11.
-
(1991)
Genetica
, vol.84
, pp. 5-11
-
-
Alberch, P.1
-
5
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S.F., Gish, W., Miller, W., Myers, E.W., and Lipmann, D.J. (1990). Basic local alignment search tool. J Mol Biol 215, 403-410.
-
(1990)
J. Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipmann, D.J.5
-
6
-
-
71049180095
-
Marker development and marker-Assisted selection in temperate fruit trees
-
R. Tuberosa, R.L. Phillips, and M. Gale, eds. (Avenue Media, Bologna, Italy)
-
Arú s, P., Howad, W., and Mnejja, M. (2005). Marker development and marker-Assisted selection in temperate fruit trees. In In the Wake of the Double Helix: From the Gree Revolution to the Gene Revolution. R. Tuberosa, R.L. Phillips, and M. Gale, eds. (Avenue Media, Bologna, Italy), pp. 309-325.
-
(2005)
Wake of the Double Helix: From the Gree Revolution to the Gene Revolution
, pp. 309-325
-
-
Arús, P.1
Howad, W.2
Mnejja, M.3
-
7
-
-
84950245594
-
Synteny in the rosaceae
-
Arú s, P., Yamamoto, T., Dirlewanger, E., and Abbott, A.G. (2006). Synteny in the Rosaceae. Plant Breed Rev 27, 175-211.
-
(2006)
Plant. Breed Rev.
, vol.27
, pp. 175-211
-
-
Arús, P.1
Yamamoto, T.2
Dirlewanger, E.3
Abbott, A.G.4
-
8
-
-
0034069495
-
Gene ontology: Tool for the unification of biology
-
DOI 10.1038/75556
-
Ashburner, M., Ball, C.A., Blake, J.A., Botstein, D., Butler, H., Cherry, J.M., et al. (2000). Gene ontology: Tool for the unification of biology. Nat Genet 25, 25-29. (Pubitemid 30257031)
-
(2000)
Nature Genetics
, vol.25
, Issue.1
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
Harris, M.A.11
Hill, D.P.12
Issel-Tarver, L.13
Kasarskis, A.14
Lewis, S.15
Matese, J.C.16
Richardson, J.E.17
Ringwald, M.18
Rubin, G.M.19
Sherlock, G.20
more..
-
9
-
-
79551680579
-
-
Press, New York)
-
Atkins, J.F., Gesteland, R.F., and Cech, T.R. (2011). RNA Worlds: From Life's to Diversity in Gene Regulation (Cold Spring Harbor Laboratory Press, New York), 361 p.p.
-
(2011)
RNA Worlds: From Life's to Diversity in Gene Regulation (Cold Spring Harbor Laboratory
, pp. 361
-
-
Atkins, J.F.1
Gesteland, R.F.2
Cech, T.R.3
-
10
-
-
0021254379
-
DNA sequence and expression of the B95-8 Epstein-Barr virus genome
-
Baer, R., Bankier, A.T., Biggin, M.D., Deininger, P.L., Farrell, P.J., Gibson, T.J., et al. (1984). DNA sequence and expression of the B95.8 Epstein-Barr virus genome. Nature 310, 207-211. (Pubitemid 14090708)
-
(1984)
Nature
, vol.310
, Issue.5974
, pp. 207-211
-
-
Baer, R.1
Bankier, A.T.2
Biggin, M.D.3
-
11
-
-
0028254263
-
Estimating nuclear-DNA content in peach and related diploid species using laser flow-cytometry and DNA hybridization
-
Baird, W.V., Estager, A.S., and Wells, J.K. (1994). Estimating nuclear-DNA content in peach and related diploid species using laser flow-cytometry and DNA hybridization. J Am Soc Hort Sci 119, 1312-1316.
-
(1994)
J. Am. Soc. Hort Sci.
, vol.119
, pp. 1312-1316
-
-
Baird, W.V.1
Estager, A.S.2
Wells, J.K.3
-
12
-
-
0032544001
-
Distribution of genes in the genome of Arabidopsis thaliana and its implications for the genome organization of plants
-
DOI 10.1073/pnas.95.17.10044
-
Barakat, A., Matassi, G., and Bernardi, G. (1998). Distribution of genes in the genome of Arabidopsis thaliana and its implications for the genome organization of plants. Proc Nat Ac Sci USA 95, 10044-10049. (Pubitemid 28415291)
-
(1998)
Proceedings of the National Academy of Sciences of the United States of America
, vol.95
, Issue.17
, pp. 10044-10049
-
-
Barakat, A.1
Matassi, G.2
Bernardi, G.3
-
13
-
-
79956341522
-
Bioinformatics and data-intensive scientific discovery in the beginning of the 21st century
-
OMICS
-
Barga, R., Howe, B., Beck, D., Browers, S., Dobyns, W., Haynes, W., et al. (2011). Bioinformatics and data-intensive scientific discovery in the beginning of the 21st century. OMICS: J Integrat Biol 15, 199-201.
-
(2011)
J. Integrat. Biol.
, vol.15
, pp. 199-201
-
-
Barga, R.1
Howe, B.2
Beck, D.3
Browers, S.4
Dobyns, W.5
Haynes, W.6
-
14
-
-
77953928286
-
Mitochondrial DNA, chloroplast DNA and the origins of development in eukaryotic organisms
-
Bendich, A.J. (2010). Mitochondrial DNA, chloroplast DNA and the origins of development in eukaryotic organisms. Biol Direct 5, 42.
-
(2010)
Biol. Direct
, vol.5
, pp. 42
-
-
Bendich, A.J.1
-
15
-
-
79952152627
-
Nuclear DNA amounts in angiosperms: Targets, trends and tomorrow
-
Bennett, M.D., and Leitch I.J. (2011). Nuclear DNA amounts in angiosperms: Targets, trends and tomorrow. Ann Bot 107, 467-590.
-
(2011)
Ann. Bot.
, vol.107
, pp. 467-590
-
-
Bennett, M.D.1
Leitch, I.J.2
-
16
-
-
67149098194
-
Current-generation high-throughput sequencing: Deepening insights into mammalian transcriptomes
-
Blencowe, B.J., Ahmad, S., and Lee, L.J. (2009). Current-generation high-throughput sequencing: Deepening insights into mammalian transcriptomes. Genet Dev 23, 1379-1386.
-
(2009)
Genet. Dev.
, vol.23
, pp. 1379-1386
-
-
Blencowe, B.J.1
Ahmad, S.2
Lee, L.J.3
-
17
-
-
20144387528
-
Evolutionary patterns of non-coding RNAs
-
DOI 10.1016/j.thbio.2005.01.002
-
Bompfü newerer, A.F., Flamm, C., Fried, C., Fritsch, G., Hofacker, I.L., Lehman, J., et al. (2004). Evolutionary patterns of non-coding RNAs. Theory Biosci 123, 301-369. (Pubitemid 40467555)
-
(2005)
Theory in Biosciences
, vol.123
, Issue.4
, pp. 301-369
-
-
Bompfunewerer, A.F.1
Flamm, C.2
Fried, C.3
Fritzsch, G.4
Hofacker, I.L.5
Lehmann, J.6
Missal, K.7
Mosig, A.8
Muller, B.9
Prohaska, S.J.10
Stadler, B.M.R.11
Stadler, P.F.12
Tanzer, A.13
Washietl, S.14
Witwer, C.15
-
18
-
-
35448930202
-
The importance of homology for biology and philosophy
-
DOI 10.1007/s10539-007-9094-6, The Importance of Homology for Biology and Philosophy
-
Brigandt, I., and Griffiths, P.E. (2007). The importance of homology for biology and philosophy. Biol Philos 22, 633-641. (Pubitemid 47617383)
-
(2007)
Biology and Philosophy
, vol.22
, Issue.5
, pp. 633-641
-
-
Brigandt, I.1
Griffiths, P.E.2
-
19
-
-
0025365984
-
Isozyme variability in four diploid stone fruits compared with other woody perennial plants
-
Byrne, D.H. (1990). Isozyme variability in four diploid stone fruits compared with other woody perennial plants. J. Heredity 81, 68-71. (Pubitemid 20182443)
-
(1990)
Journal of Heredity
, vol.81
, Issue.1
, pp. 68-71
-
-
Byrne, D.H.1
-
20
-
-
71649108473
-
Development and bin mapping of a rosaceae conserved ortholog set (COS) of markers
-
Cabrera, A., Kozik, A., Howad, W., Arú s, P., Iezzoni, A.F., and van der Knaap, E. (2009). Development and bin mapping of a Rosaceae Conserved Ortholog Set (COS) of markers. BMC Genomics 10, 562.
-
(2009)
BMC Genomics
, vol.10
, pp. 562
-
-
Cabrera, A.1
Kozik, A.2
Howad, W.3
Arús, P.4
Iezzoni, A.F.5
Van Der Knaap, E.6
-
21
-
-
1242316956
-
Plant proteome analysis
-
DOI 10.1002/pmic.200300602
-
Cánovas, F.N., Dumas-Gaudot, E., Recorbet, G., Mock, H.P., and Rossignol, M. (2004). Plant proteome analysis. Proteomics 4, 285-298. (Pubitemid 38235245)
-
(2004)
Proteomics
, vol.4
, Issue.2
, pp. 285-298
-
-
Canovas, F.M.1
Dumas-Gaudot, E.2
Recorbet, G.3
Jorrin, J.4
Mock, H.-P.5
Rossignol, M.6
-
22
-
-
14844282107
-
Comparative interactomics
-
DOI 10.1016/j.febslet.2005.01.064, Systems Biology
-
Cesareni, G., Ceol, A., Gavrila, C., Palazzi, L.M., Persico, M., and Schneider, M.A. (2005). Comparative interactomics. FEBS Lett 579, 1828-1833. (Pubitemid 40342660)
-
(2005)
FEBS Letters
, vol.579
, Issue.8
, pp. 1828-1833
-
-
Cesareni, G.1
Ceol, A.2
Gavrila, C.3
Palazzi, L.M.4
Persico, M.5
Schneider, M.V.6
-
23
-
-
35348996554
-
Specialization and evolution of endogenous small RNA pathways
-
DOI 10.1038/nrg2179, PII NRG2179
-
Chapman, E.J., and Carrington, J.C. (2007). Specialization and evolution of endogenous small RNA pathways. Nat Rev Genet 8, 884-896. (Pubitemid 47609087)
-
(2007)
Nature Reviews Genetics
, vol.8
, Issue.11
, pp. 884-896
-
-
Chapman, E.J.1
Carrington, J.C.2
-
24
-
-
79960911703
-
The reality of pervasive transcription
-
Clark, M.B., Amaral, P.P., Schelinsger, F.J., Dinger, M.E., Taft, R.J., Rinn, J.L., et al. (2011). The reality of pervasive transcription. Plos Biol 9, e1000625.
-
(2011)
Plos. Biol.
, vol.9
-
-
Clark, M.B.1
Amaral, P.P.2
Schelinsger, F.J.3
Dinger, M.E.4
Taft, R.J.5
Rinn, J.L.6
-
25
-
-
40949130394
-
Marker-assisted selection: An approach for precision plant breeding in the twenty-first century
-
DOI 10.1098/rstb.2007.2170, PII 8731828765572240
-
Collard, B.C.Y., and Mackill, D.J. (2008). Marker-Assisted selection: An approach for precision plant breeding in the twentyfirst century. Philos Trans R Soc B 363, 557-572. (Pubitemid 351437353)
-
(2008)
Philosophical Transactions of the Royal Society B: Biological Sciences
, vol.363
, Issue.1491
, pp. 557-572
-
-
Collard, B.C.Y.1
Mackill, D.J.2
-
26
-
-
10744223304
-
Efficient discovery of DNA polymorphisms in natural populations by Ecotilling
-
DOI 10.1111/j.0960-7412.2003.01999.x
-
Comai, L., Young, K., Till, B.J., Reynolds, S.H., Greene, E.A., Codomo, C.A., et al. (2004). Efficient discovery of DNA polymorphisms in natural populations by EcoTILLING. Plant J 37, 778-786. (Pubitemid 38300522)
-
(2004)
Plant Journal
, vol.37
, Issue.5
, pp. 778-786
-
-
Comai, L.1
Young, K.2
Till, B.J.3
Reynolds, S.H.4
Greene, E.A.5
Codomo, C.A.6
Enns, L.C.7
Johnson, J.E.8
Burtner, C.9
Odden, A.R.10
Henikoff, S.11
-
27
-
-
24644503098
-
Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research
-
Conesa, A., Golz, S., García-Gómez, J.M., Terol, J., Talon, M., and Robles, M. (2005). Blast2GO: A universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21, 3678-3676.
-
(2005)
Bioinformatics
, vol.21
, pp. 3678-3676
-
-
Conesa, A.1
Golz, S.2
García-Gómez, J.M.3
Terol, J.4
Talon, M.5
Robles, M.6
-
29
-
-
0014937223
-
Central dogma of molecular biology
-
Crick, F. (1970). Central dogma of molecular biology. Nature 227, 561-5633.
-
(1970)
Nature
, vol.227
, pp. 561-5633
-
-
Crick, F.1
-
30
-
-
84860734696
-
Sequencing and reference assembly of the Prunus domestica (European Plum) Genome
-
January 2011. San Diego, USA.
-
Dardick, C., Callahan, A., Scorza, R., Staton, M., and Abbott, A. (2011). Sequencing and reference assembly of the Prunus domestica (European Plum) Genome. Plant & Animal Genome XIX Conference. January 2011. San Diego, USA. W250.
-
(2011)
Plant & Animal Genome XIX Conference
-
-
Dardick, C.1
Callahan, A.2
Scorza, R.3
Staton, M.4
Abbott, A.5
-
31
-
-
84860767948
-
-
Cold Spring Harbor Laboratory Press, New York)
-
Darnell, J. (2011). RNA: Life's Indispensable Molecule (Cold Spring Harbor Laboratory Press, New York), 416 p.p.
-
(2011)
RNA: Life's Indispensable Molecule
, pp. 416
-
-
Darnell, J.1
-
32
-
-
0038175517
-
Development and transferability of apricot and grape EST microsatellite markers across taxa
-
Decroocq, V., Fave, M.G., Hagen, L., Bordenave, L., and Decroocq, S. (2003). Development and transferability of apricot and grape EST microsatellite markers across taxa. Theor Appl Genet 106, 912-922. (Pubitemid 36599655)
-
(2003)
Theoretical and Applied Genetics
, vol.106
, Issue.5
, pp. 912-922
-
-
Decroocq, V.1
Fave, M.G.2
Hagen, L.3
Bordenave, L.4
Decroocq, S.5
-
33
-
-
77956753681
-
High throughput DNA sequencing: The new sequencing revolution
-
Delseny, M., Han, B., and Hsing, Y.I. (2010). High throughput DNA sequencing: The new sequencing revolution. Plant Sci 179, 407-422.
-
(2010)
Plant. Sci.
, vol.179
, pp. 407-422
-
-
Delseny, M.1
Han, B.2
Hsing, Y.I.3
-
34
-
-
33845235899
-
The apoplastic antioxidant system in Prunus: Response against long-term Plum pox virus infection
-
Díaz-Vivancos, P., Rubio, M., Mesonero, V., Periago, P.M., Ros-Barceló , A., Martínez-Gómez, P., et al. (2006). The apoplastic antioxidant system in Prunus: Response against long-term Plum pox virus infection. J Exp Bot 57, 123-133.
-
(2006)
J. Exp. Bot.
, vol.57
, pp. 123-133
-
-
Díaz-Vivancos, P.1
Rubio, M.2
Mesonero, V.3
Periago, P.M.4
Ros-Barceló, A.5
Martínez-Gómez, P.6
-
35
-
-
78349311037
-
Silencing of Plum pox virus 5cent;UTR/P1 sequence confers resistance to a wide range of PPV strains
-
Di Nicola-Negri, E., Tavazza, M., Salandri, L., and Ilardi, V. (2010). Silencing of Plum pox virus 5cent;UTR/P1 sequence confers resistance to a wide range of PPV strains. Plant Cell Ep 29, 1435-1444.
-
(2010)
Plant Cell Ep.
, vol.29
, pp. 1435-1444
-
-
Di Nicola-Negri, E.1
Tavazza, M.2
Salandri, L.3
Ilardi, V.4
-
36
-
-
3042748130
-
Comparative mapping and marker-assisted selection in Rosaceae fruit crops
-
DOI 10.1073/pnas.0307937101
-
Dirlewanger, E., Graziano, E., Joobeur, T., Garriga-Caldré, F., Cosson, P., Howad, W., et al. (2004). Comparative mapping and marker-Assisted selection in Rosaceae fruit crops. Proc Natl Acad Sci USA 101, 9891-9896. (Pubitemid 38869332)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.26
, pp. 9891-9896
-
-
Dirlewanger, E.1
Graziano, E.2
Joobeur, T.3
Garriga-Caldere, F.4
Cosson, P.5
Howad, W.6
Arus, P.7
-
37
-
-
52649157765
-
Substantial biases in ultra-short read data sets from high-throughput DNA sequencing
-
Dohm, J.C., Lottaz, C., Borodina, T., and Himmelbauer, H. (2008). Substantial biases in ultra-short read data sets from high-throughput DNA sequencing. Nucleic Acids Res 36, e105.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Dohm, J.C.1
Lottaz, C.2
Borodina, T.3
Himmelbauer, H.4
-
38
-
-
71949131301
-
Plant genome sequencing: Application for crop improvement
-
Edwards, D., and Batley, J. (2010). Plant genome sequencing: Application for crop improvement. Plant Biotechnol J 8, 2-9.
-
(2010)
Plant Biotechnol. J.
, vol.8
, pp. 2-9
-
-
Edwards, D.1
Batley, J.2
-
39
-
-
84860765888
-
Developing an online toolbox for tree fruit breeding
-
November 2010. Stellenbosch South Africa. O20
-
Evans, K., Jung, S., Lee, T., Oraguzie, N., Peace, C., and Main, D. (2010). Developing an online toolbox for tree fruit breeding. 5th International Rosaceae Genomics Conference. November 2010. Stellenbosch, South Africa. O20.
-
(2010)
5th International Rosaceae Genomics Conference
-
-
Evans, K.1
Jung, S.2
Lee, T.3
Oraguzie, N.4
Peace, C.5
Main, D.6
-
40
-
-
77957867921
-
Protein networks reveal detection bias and species consistency when analysed by information-theoretic methods
-
Fernandes, L.P., Annibale, A., Kleinjung, J., Coolen, A.C.C., and Fraternal, F. (2010). Protein networks reveal detection bias and species consistency when analysed by information-theoretic methods. PloS ONE 5, e12083.
-
(2010)
Plos One
, vol.5
-
-
Fernandes, L.P.1
Annibale, A.2
Kleinjung, J.3
Coolen, A.C.C.4
Fraternal, F.5
-
41
-
-
0002633241
-
Explanation, reduction, and empiricism
-
Space and Time H. Feigl and G. Maxwell, eds. Minneapolis, MN: University of Minnesota
-
Feyerabend, P.K. (1962). Explanation, reduction, and empiricism. In Minnesota Studies in the Philosophy of Science: Scientific Explanation, Space and Time, Vol. 3. H. Feigl and G. Maxwell, eds. Minneapolis, MN: University of Minnesota, pp. 28-97.
-
(1962)
Minnesota Studies in the Philosophy of Science: Scientific Explanation
, vol.3
, pp. 28-97
-
-
Feyerabend, P.K.1
-
42
-
-
0036007687
-
Metabolomics - The link between genotype and phenotype
-
Fiehm, O. (2002). Metabolomics-the link between genotype and phenotype. Plant Mol Biol 48, 155-171.
-
(2002)
Plant Mol. Biol.
, vol.48
, pp. 155-171
-
-
Fiehm, O.1
-
43
-
-
78649511663
-
Model plants, with special emphasis on Arabidopsis thaliana, and crop improvement
-
R. Tuberosa, R.L. Phillips M. and Gale, eds. (Avenue Media, Bologna, Italy)
-
Flavell, R. (2005). Model plants, with special emphasis on Arabidopsis thaliana, and crop improvement. In In the Wake of the Double Helix: From the Gree Revolution to the Gene Revolution. R. Tuberosa, R.L. Phillips, M. and Gale, eds. (Avenue Media, Bologna, Italy), pp. 365-378.
-
(2005)
Wake of the Double Helix: From the Gree Revolution to the Gene Revolution
, pp. 365-378
-
-
Flavell, R.1
-
44
-
-
84860743452
-
Digging deep with RNA-Seq
-
Flintoft, L. (2008). Digging deep with RNA-Seq. Nat Rev Genet 9, 413-413.
-
(2008)
Nat. Rev. Genet.
, vol.9
, pp. 413-413
-
-
Flintoft, L.1
-
45
-
-
66349094918
-
Whole genome and transcriptome analysis
-
Forrest, A.R.R., and Carninci, P. (2009). Whole genome and transcriptome analysis. RNA Biol 6, 107-112.
-
(2009)
RNA Biol.
, vol.6
, pp. 107-112
-
-
Forrest, A.R.R.1
Carninci, P.2
-
46
-
-
18044387854
-
Metabolomics, genomics, proteomics, and the identification of enzymes and their substrates and products
-
DOI 10.1016/j.pbi.2005.03.004
-
Fridman, E., and Pichersky, E. (2005). Metabolomics, genomics, proteomics, and the identification of enzymes and their substrates and products. Curr Opin Plant Biol 8, 242-248. (Pubitemid 40599978)
-
(2005)
Current Opinion in Plant Biology
, vol.8
, pp. 242-248
-
-
Fridman, E.1
Pichersky, E.2
-
47
-
-
0013532332
-
-
European Cooperative Program for Crop Genetic Resources Networks (ECP/GR) (International Plant Genetic Resources Institute, Rome, Italy)
-
Gass, T., Tobutt, K.R., and Zanetto, A. (1996). Report of the Working Group on Prunus. European Cooperative Program for Crop Genetic Resources Networks (ECP/GR) (International Plant Genetic Resources Institute, Rome, Italy), 89 p.p.
-
(1996)
Report of the Working Group on Prunus
, pp. 89
-
-
Gass, T.1
Tobutt, K.R.2
Zanetto, A.3
-
48
-
-
34250308428
-
Origin of phenotypes: Genes and transcripts
-
DOI 10.1101/gr.6525007
-
Gingeras, T.R. (2011). Origin of phenotypes: Genes and transcripts. Genome Res 17, 682-690. (Pubitemid 46919706)
-
(2007)
Genome Research
, vol.17
, Issue.6
, pp. 682-690
-
-
Gingeras, T.R.1
-
49
-
-
33846052601
-
Eukaryotic genome size databases
-
DOI 10.1093/nar/gkl828
-
Gregory, T.R., Nicol, J.A., Tamn, H., Kullman, B., Kullman, K., Leitch, I.J., et al. (2007). Eukaryotic genome size databases. Nucleic Acid Res 36, D332-D338. (Pubitemid 46056226)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.SUPPL. 1
-
-
Gregory, T.R.1
Nicol, J.A.2
Tamm, H.3
Kullman, B.4
Kullman, K.5
Leitch, I.J.6
Murray, B.G.7
Kapraun, D.F.8
Greilhuber, J.9
Bennett, M.D.10
-
50
-
-
38549150275
-
miRBase: Tools for microRNA genomics
-
DOI 10.1093/nar/gkm952
-
Griffiths-Jones, S., Saini, H.K., Dongen, S., and Enright, A.J. (2008). miRBase: Tools for microRNA genomics. Nucleic Acid Res 36, D154-D158. (Pubitemid 351149713)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
Griffiths-Jones, S.1
Saini, H.K.2
Van Dongen, S.3
Enright, A.J.4
-
51
-
-
84871523312
-
Chromatin structure and domain
-
Available at
-
Grimaud, C. (2011). Chromatin Structure and Domain. Encyclopedia of Life Sciences. Available at: http://www.els.net/WileyCDA/
-
(2011)
Encyclopedia of Life Sciences
-
-
Grimaud, C.1
-
52
-
-
84860705001
-
Transcriptomics and proteomics tools towards ripening markers for assisted selection in apricot
-
Grimplet, J., Romieu, C., Sauvage, F.X., Lambert, P., Audergon, J.M., and Terrier, N. (2004). Transcriptomics and proteomics tools towards ripening markers for assisted selection in apricot. Acta Hort 663, 291-296. (Pubitemid 41006788)
-
(2004)
Acta Hort
, vol.1
, Issue.663
, pp. 291-296
-
-
Grimplet, J.1
Romieu, C.2
Sauvage, F.X.3
Lambert, P.4
Audergon, J.M.5
Terrier, N.6
-
53
-
-
0038060807
-
Microsatellites in plants: A new class of molecular markers
-
Gupta, P.K., Balyan, H.S., Sharma, P.C., and Ramesh B. (1996). Microsatellites in plants: A new class of molecular markers. Curr Sci 70, 45-54. (Pubitemid 126419356)
-
(1996)
Current Science
, vol.70
, Issue.1
, pp. 45-54
-
-
Gupta, P.K.1
Balyan, H.S.2
Sharma, P.C.3
Ramesh, B.4
-
54
-
-
76149130971
-
Alternative splicing: Global insights
-
Hallegger, M., Llorian, M., and Smith, C.W.J. (2010). Alternative splicing: Global insights. FEBS J 277, 856-866.
-
(2010)
FEBS J.
, vol.277
, pp. 856-866
-
-
Hallegger, M.1
Llorian, M.2
Smith, C.W.J.3
-
55
-
-
33947582660
-
Are Vavilov's law of homologous series and synteny related
-
Hammer, K., and Schubert, I. (1994). Are Vavilov's law of homologous series and synteny related? Gen Res Crop Evol 41, 123-124.
-
(1994)
Gen. Res. Crop Evol.
, vol.41
, pp. 123-124
-
-
Hammer, K.1
Schubert, I.2
-
56
-
-
77955883388
-
Biases in Illumina transcriptome sequencing caused by random hexamer priming
-
Hansen, K.D., Brenner, E., and Dudoit, S. (2010). Biases in Illumina transcriptome sequencing caused by random hexamer priming. Nucleic Ac Res 38, e131.
-
(2010)
Nucleic Ac. Res.
, vol.38
-
-
Hansen, K.D.1
Brenner, E.2
Dudoit, S.3
-
57
-
-
78649267733
-
Grand challenge commentary: RNA epigenetics
-
He, C. (2010). Grand Challenge Commentary: RNA epigenetics? Nat Chem Biol 6, 863-865.
-
(2010)
Nat. Chem. Biol.
, vol.6
, pp. 863-865
-
-
He, C.1
-
58
-
-
13144275312
-
Hybrid speciation in plants: New insights from molecular studies
-
Hegarty, M.J., and Hiscock, S.J. (2004). Hybrid speciation in plants: new insights from molecular studies. New Phytol 165, 411-423.
-
(2004)
New Phytol.
, vol.165
, pp. 411-423
-
-
Hegarty, M.J.1
Hiscock, S.J.2
-
59
-
-
0034094932
-
Comparative genome organization in plants: From sequence and markers to chromatin and chromosomes
-
DOI 10.1105/tpc.12.5.617
-
Heslop-Harrison, J.S. (2000). Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes. Plant Cell 12, 617-635. (Pubitemid 30343577)
-
(2000)
Plant Cell
, vol.12
, Issue.5
, pp. 617-635
-
-
Heslop-Harrison, J.S.1
-
60
-
-
84871501449
-
Posttrannscriptional processing
-
Available at
-
Hodges, A.K. (2005). Posttrannscriptional processing. Encyclopedia of Life Sciences. Available at: http://www.els.net/WileyCDA/
-
(2005)
Encyclopedia of Life Sciences
-
-
Hodges, A.K.1
-
61
-
-
78549246207
-
Phenomics: The next challenge
-
Houle, D., Goviandaraju, D.R., and Omholt, S. (2010). Phenomics: The next challenge. Nat Rev 11, 855-866.
-
(2010)
Nat. Rev.
, vol.11
, pp. 855-866
-
-
Houle, D.1
Goviandaraju, D.R.2
Omholt, S.3
-
62
-
-
79957567699
-
Characterization of protein-DNA interactions using protein microarray
-
pbd.prot5614
-
Hu, S., Zhi, X., Blackshaw, S., Quian J., and Zhu, H. (2011). Characterization of protein-DNA interactions using protein microarray. Cold Spring Harbor Protocol 2011, pbd.prot5614.
-
(2011)
Cold Spring Harbor Protocol 2011
-
-
Hu, S.1
Zhi, X.2
Blackshaw, S.3
Quian, J.4
Zhu, H.5
-
63
-
-
77957565591
-
Rosaceae: Taxonomy, economic importance, genomics
-
K.M. Folta and S.E. Gardiner, eds. Springer, Heidelberg, Germany)
-
Hummer, K.E., and Janick, J. (2009). Rosaceae: Taxonomy, economic importance, genomics. In Genetics and Genomics of Rosaceae. K.M. Folta and S.E. Gardiner, eds. (Springer, Heidelberg, Germany), pp. 1-17.
-
(2009)
Genetics and Genomics of Rosaceae
, pp. 1-17
-
-
Hummer, K.E.1
Janick, J.2
-
64
-
-
78651259869
-
Comparative analysis of rosaceous genomes and the reconstruction of a putative ancestral genome for the family
-
Illa, E., Sargeant, D.J., Lopez, E., Bushara, J., Cestaro, A., Pindo, M., Cabrera, A., et al. (2011). Comparative analysis of rosaceous genomes and the reconstruction of a putative ancestral genome for the family. BMC Evol Biol 11, 9.
-
(2011)
BMC Evol. Biol.
, vol.11
, pp. 9
-
-
Illa, E.1
Sargeant, D.J.2
Lopez, E.3
Bushara, J.4
Cestaro, A.5
Pindo, M.6
Cabrera, A.7
-
65
-
-
70450169667
-
De novo sequencing of plant genomes using second-generation technologies
-
Imelford, M., and Edwards, D. (2009). De novo sequencing of plant genomes using second-generation technologies. Brief Bioinformatics 10, 609-618.
-
(2009)
Brief Bioinformatics
, vol.10
, pp. 609-618
-
-
Imelford, M.1
Edwards, D.2
-
66
-
-
84871516124
-
Breeding for fruit quality in Prunus
-
M.A. Jenks and P.J. Bebeli, eds. Wiley & Blackwell, New York)
-
Infante, R., Martínez-Gómez, P., and Predieri, S. (2011). Breeding for fruit quality in Prunus. In Breeding for Fruit Quality. M.A. Jenks and P.J. Bebeli, eds. (Wiley & Blackwell, New York), pp. 201-229.
-
(2011)
Breeding for Fruit Quality
, pp. 201-229
-
-
Infante, R.1
Martínez-Gómez, P.2
Predieri, S.3
-
67
-
-
79551537130
-
Association genetics of complex traits in plants
-
Ingvarsson, P.K., and Street, N.R. (2011). Association genetics of complex traits in plants. New Pytol 189, 909-912.
-
(2011)
New Pytol.
, vol.189
, pp. 909-912
-
-
Ingvarsson, P.K.1
Street, N.R.2
-
68
-
-
80051578403
-
Sequencing crop genomes: Approaches and applications
-
Jackson, S.A., Iwata, A., Lee, S.H., Schmutz, J., and Shoemaker, R. (2011). Sequencing crop genomes: Approaches and applications. New Phytol 191, 915-925.
-
(2011)
New Phytol.
, vol.191
, pp. 915-925
-
-
Jackson, S.A.1
Iwata, A.2
Lee, S.H.3
Schmutz, J.4
Shoemaker, R.5
-
69
-
-
70449953975
-
The complex eukaryotic transcriptome: Unexpected pervasive transcription and novel small RNAs
-
Jacquier, A. (2009). The complex eukaryotic transcriptome: Unexpected pervasive transcription and novel small RNAs. Nat Rev 10, 833-844.
-
(2009)
Nat. Rev.
, vol.10
, pp. 833-844
-
-
Jacquier, A.1
-
71
-
-
79960980891
-
The noncoding universe
-
Jarvis, K., and Robertson, M. (2011). The noncoding universe. BMC Biol 9, 52.
-
(2011)
BMC Biol.
, vol.9
, Issue.52
-
-
Jarvis, K.1
Robertson, M.2
-
72
-
-
0345393209
-
Generation and analysis of expressed sequence tags from almond (Prunus dulcis Mill.) pistils
-
Jiang, Y.Q., & Ma, R.C. (2003). Generation and analysis of expressed sequence tags from almond (Prunus dulcis Mill.) pistils. Sex Plant Rep 16, 197-207.
-
(2003)
Sex Plant Rep.
, vol.16
, pp. 197-207
-
-
Jiang, Y.Q.1
Ma, R.C.2
-
73
-
-
13244295469
-
GDR (Genome database for Rosaceae): Integrated web resources for Rosaceae genomics and genetics research
-
Jung, S., Jesudurai, C., Staton, M., Ficklin, S., Cho, I., Abbott, A., et al. (2004). GDR (Genome database for Rosaceae): Integrated web resources for Rosaceae genomics and genetics research. BMC Bioinformatics 5, 130.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 130
-
-
Jung, S.1
Jesudurai, C.2
Staton, M.3
Ficklin, S.4
Cho, I.5
Abbott, A.6
-
74
-
-
61449175946
-
Synteny of prunus and other model plant species
-
Jung, S., Jiwan, D., Cho, I., Abbott, A., Tomkins, J., and Main, D. (2009). Synteny of Prunus and other model plant species. BMC Genomics 10, 76.
-
(2009)
BMC Genomics
, vol.10
, pp. 76
-
-
Jung, S.1
Jiwan, D.2
Cho, I.3
Abbott, A.4
Tomkins, J.5
Main, D.6
-
75
-
-
84871505301
-
GDR (genome database for rosaceae): Building resources for translational research in Rosaceae
-
January 2011. San Diego, USA. C888
-
Jung, S., Lee, T., Ficklin, S., Staton, M., Cheng, C.H., Cho, C., Hill, J., et al. (2011). GDR (Genome database for Rosaceae): Building resources for translational research in Rosaceae. Plant & Animal Genome XIX Conference. January 2011. San Diego, USA. C888.
-
(2011)
Plant & Animal Genome XIX Conference
-
-
Jung, S.1
Lee, T.2
Ficklin, S.3
Staton, M.4
Cheng, C.H.5
Cho, C.6
Hill, J.7
-
76
-
-
46649115430
-
Splign: Algorithms for computing spliced alignments with identification of paralogs
-
Kapustin, Y., Souvorov, A., Tatusova, T., and Lipman, D. (2008). Splign: Algorithms for computing spliced alignments with identification of paralogs. Biol Direct 3, 20.
-
(2008)
Biol. Direct
, vol.3
, pp. 20
-
-
Kapustin, Y.1
Souvorov, A.2
Tatusova, T.3
Lipman, D.4
-
77
-
-
18344373363
-
Small RNAs: Classification, biogenesis, and functions
-
Kim, V.N. (2005). Small RNAs: Classification, biogenesis, and functions. Mol Cells 19, 1-5.
-
(2005)
Mol. Cells
, vol.19
, pp. 1-5
-
-
Kim, V.N.1
-
78
-
-
77956017391
-
A vision for the 21st century US policy to support sustainable advancement of scientific discovery and technological innovation
-
OMICS
-
Kolker, E. (2010). A vision for the 21st century U.S. policy to support sustainable advancement of scientific discovery and technological innovation. OMICS: J Integrat Biol 14, 333-335.
-
(2010)
J. Integrat Biol.
, vol.14
, pp. 333-335
-
-
Kolker, E.1
-
79
-
-
0035014185
-
Directed evolution of proteins by exon shuffling
-
DOI 10.1038/88084
-
Kolkman, J.A., and Stemmer, W.P.C. (2001). Directed evolution of proteins by exon shuffling. Nat Biotechnol 19, 423-428. (Pubitemid 32428283)
-
(2001)
Nature Biotechnology
, vol.19
, Issue.5
, pp. 423-428
-
-
Kolkman, J.A.1
Stemmer, W.P.C.2
-
83
-
-
12544252727
-
Transcriptional analysis and functional genomics in wheat
-
Leader, D.J. (2005). Transcriptional analysis and functional genomics in wheat. J Cereal Sci 41, 149-163.
-
(2005)
J. Cereal. Sci.
, vol.41
, pp. 149-163
-
-
Leader, D.J.1
-
84
-
-
82955200084
-
Histone modifications and expression of DAM6 gene in peach are modulated during bud dormancy release in a cultivar-dependent manner
-
Leida, C., Conesa, A., Llácer, G., Badenes, M.L., and Ríos, G. (2012). Histone modifications and expression of DAM6 gene in peach are modulated during bud dormancy release in a cultivar-dependent manner. New Phytol 193, 67-80.
-
(2012)
New Phytol.
, vol.193
, pp. 67-80
-
-
Leida, C.1
Conesa, A.2
Llácer, G.3
Badenes, M.L.4
Ríos, G.5
-
85
-
-
82755171862
-
Metabolic profiling during peach fruit development and ripening reveals the metabolic networks which underpin each developmental stage
-
Lombardo, V.A., Osorio, S., Borsani, J., Lauxmann, M.A., Bustamente, C.A., Budde, C.O., et al. (2011). Metabolic profiling during peach fruit development and ripening reveals the metabolic networks which underpin each developmental stage. Plant Physiol 157, 1696-1710.
-
(2011)
Plant Physiol.
, vol.157
, pp. 1696-1710
-
-
Lombardo, V.A.1
Osorio, S.2
Borsani, J.3
Lauxmann, M.A.4
Bustamente, C.A.5
Budde, C.O.6
-
87
-
-
71149108056
-
Correlation of mRNA and protein in complex biological samples
-
Maier, T., Gü ell, M., and Serrano, L. (2009). Correlation of mRNA and protein in complex biological samples. FEBS Lett 583, 3966-3973.
-
(2009)
FEBS Lett.
, vol.583
, pp. 3966-3973
-
-
Maier, T.1
Güell, M.2
Serrano, L.3
-
88
-
-
39649117755
-
The impact of next-generation sequencing technology om genetics
-
Mardis, E.R. (2008). The impact of next-generation sequencing technology om genetics. Trends Genet 24, 133-141.
-
(2008)
Trends Genet.
, vol.24
, pp. 133-141
-
-
Mardis, E.R.1
-
89
-
-
75649135574
-
RNA-Seq: from technology to biology
-
Marguerat, S., and Bä hler, J. (2010). RNA-Seq: from technology to biology. Cell Mol Life Sci 67, 569-579.
-
(2010)
Cell Mol. Life Sci.
, vol.67
, pp. 569-579
-
-
Marguerat, S.1
Bähler, J.2
-
90
-
-
33645969936
-
New approach to Prunus tree crop breeding
-
Martínez-Gómez, P., Sozzi, G.O., Sánchez- Pérez, R., Rubio, M., and Gradziel, T.M. (2003). New approach to Prunus tree crop breeding. J Food Agr Environ 1, 52-63.
-
(2003)
J. Food Agr. Environ
, vol.1
, pp. 52-63
-
-
Martínez-Gómez, P.1
Sozzi, G.O.2
Sánchez-Pérez, R.3
Rubio, M.4
Gradziel, T.M.5
-
91
-
-
39049120604
-
-
C.R. Kole, e.d. Springer, New York)
-
Martínez-Gómez, P., Sánchez-Pérez, R., Howad, V., Dicenta, F., Arú s, P., and Gradziel, T.M. (2007). Almond. In Genome Mapping and Molecular Breeding, Vol. 4. C.R. Kole, ed. (Springer, New York), pp. 229-242.
-
(2007)
Almond in Genome Mapping and Molecular Breeding
, vol.4
, pp. 229-242
-
-
Martínez-Gómez, P.1
Sánchez-Pérez, R.2
Howad, V.3
Dicenta, F.4
Arús, P.5
Gradziel, T.M.6
-
92
-
-
79959218220
-
New approaches to Prunus transcriptome analysis
-
Martínez-Gómez, P., Crisosoto, C., Bonghi, C., and Rubio, M. (2011). New approaches to Prunus transcriptome analysis. Genetica 139, 755-769.
-
(2011)
Genetica
, vol.139
, pp. 755-769
-
-
Martínez-Gómez, P.1
Crisosoto, C.2
Bonghi, C.3
Rubio, M.4
-
93
-
-
19344365307
-
Planting the seeds of a new paradigm
-
Matzke, M.A., and Matzke, .JM. (2004). Planting the seeds of a new paradigm. PloS Biol 2, 582-586.
-
(2004)
Plos Biol.
, vol.2
, pp. 582-586
-
-
Matzke, M.A.1
Matzke, J.M.2
-
94
-
-
84886350542
-
In silico analysis and first applications of SNPs from the GDR database in peach
-
September 2007. Zaragoza, Spain. P
-
Meneses, C., Jung, S., Arú s, P., Aranzana, M.J., and Abbott, A. (2007). In silico analysis and first applications of SNPs from the GDR database in peach. XII EUCARPIA Fruit Section Symposium. September 2007. Zaragoza, Spain. P:67.
-
(2007)
XII Eucarpia Fruit Section Symposium
, vol.67
-
-
Meneses, C.1
Jung, S.2
Arús, P.3
Aranzana, M.J.4
Abbott, A.5
-
95
-
-
84871512770
-
Mrna untranslated regions (UTRs
-
Available at
-
Mignone, F., and Pesole, G. (2011). mRNA Untranslated Regions (UTRs). Encyclopedia of Life Sciences. Available at; http://www.els.net/WileyCDA/
-
(2011)
Encyclopedia of Life Sciences
-
-
Mignone, F.1
Pesole, G.2
-
96
-
-
83255189512
-
Advances in omics and bioinformatics tools for systems analyses of plant functions
-
Mochida, K., and Shinozami, K. (2011). Advances in omics and bioinformatics tools for systems analyses of plant functions. Plant Cell Physiol 52, 2017-2038.
-
(2011)
Plant. Cell Physiol.
, vol.52
, pp. 2017-2038
-
-
Mochida, K.1
Shinozami, K.2
-
97
-
-
0008769975
-
-
Purdue University Press, West Lafayette, IN)
-
Moore, J.N., and Janick, J., eds. (1983). Methods in Fruit Breeding (Purdue University Press, West Lafayette, IN), 464 pp.
-
(1983)
Methods in Fruit Breeding
, pp. 464
-
-
Moore, J.N.1
Janick, J.2
-
98
-
-
0037728656
-
From plant genomics to breeding practice
-
DOI 10.1016/S0958-1669(03)00028-4
-
Morgante, M., and Salamini, F. (2003). From plant genomics to breeding practice. Curr Opin Biotechnol 14, 214-219. (Pubitemid 36561234)
-
(2003)
Current Opinion in Biotechnology
, vol.14
, Issue.2
, pp. 214-219
-
-
Morgante, M.1
Salamini, F.2
-
99
-
-
33748170997
-
Annotation of environmental pmocs data: Application to the transcriptomic domain
-
OMICS
-
Morrison, N., Wood, J., Hancocq, D., Shah, S., Hakes, L., Gray, T., et. al. (2006a). Annotation of environmental PMOCS data: Application to the transcriptomic domain. OMICS: J Integrat Biol 10, 172-201.
-
(2006)
J. Integrat. Biol.
, vol.10
, pp. 172-201
-
-
Morrison, N.1
Wood, J.2
Hancocq, D.3
Shah, S.4
Hakes, L.5
Gray, T.6
-
100
-
-
33748211140
-
Concept of sample in OMICS technology
-
DOI 10.1089/omi.2006.10.127
-
Morrison, N., Cochrane, G., Faruque, N., Tatusova, T., Taneo, Y., Hancocq, D., et al. (2006b). Concept of sample in OMICS technology. OMICS: J Integrat Biol 10, 127-137. (Pubitemid 44313660)
-
(2006)
OMICS A Journal of Integrative Biology
, vol.10
, Issue.2
, pp. 127-137
-
-
Morrison, N.1
Cochrane, G.2
Faruque, N.3
Tatusova, T.4
Tateno, Y.5
Hancock, D.6
Field, D.7
-
102
-
-
77149172518
-
Proteomic analysis of temperature stress in plants
-
Neilson, K.A., Gammulla, C.G., Mirzaei, M., Imin, N., and Haynes, P.A. (2010). Proteomic analysis of temperature stress in plants. Proteomics 10, 828-845.
-
(2010)
Proteomics
, vol.10
, pp. 828-845
-
-
Neilson, K.A.1
Gammulla, C.G.2
Mirzaei, M.3
Imin, N.4
Haynes, P.A.5
-
103
-
-
84871484917
-
RNA Interaction in mRNA Splicing
-
Available at
-
Newman, A.J. (2008). RNA Interaction in mRNA Splicing. Encyclopedia of Life Sciences. Available at: http://www.els.net/WileyCDA/
-
(2008)
Encyclopedia of Life Sciences
-
-
Newman, A.J.1
-
104
-
-
50849127837
-
Genetic variation in an individual human exome
-
Ng, P.C., Levy, S., Huang, J., Stockwell, T.B., Walenz, B.P., Li, K., et al. (2008). Genetic variation in an individual human exome. PloS Genet 4, e1000160.
-
(2008)
Plos Genet.
, vol.4
-
-
Ng, P.C.1
Levy, S.2
Huang, J.3
Stockwell, T.B.4
Walenz, B.P.5
Li, K.6
-
105
-
-
39649088431
-
Phenome connections
-
Oti, M., Huynen, M.A., and Brunner, H.G. (2008). Phenome connections. Trends Genet 24, 103-108.
-
(2008)
Trends Genet.
, vol.24
, pp. 103-108
-
-
Oti, M.1
Huynen, M.A.2
Brunner, H.G.3
-
106
-
-
0034659815
-
Proteomics to study genes and genomes
-
DOI 10.1038/35015709
-
Pandey, A., and Mann, M. (2000). Proteomics to study genes and genomes. Nature 405, 837-846. (Pubitemid 30407862)
-
(2000)
Nature
, vol.405
, Issue.6788
, pp. 837-846
-
-
Pandey, A.1
Mann, M.2
-
107
-
-
77954734628
-
Genomics approaches to crop improvement in the Rosaceae
-
K.M. Folta and S.E. Gardiner, eds. Springer, Heidelberg, Germany)
-
Peace, C., and Norelli, J.L. (2009). Genomics approaches to crop improvement in the Rosaceae. In Genetics and Genomics of Rosaceae. K.M. Folta and S.E. Gardiner, eds. (Springer, Heidelberg, Germany), pp. 19-53.
-
(2009)
Genetics and Genomics of Rosaceae
, pp. 19-53
-
-
Peace, C.1
Norelli, J.L.2
-
108
-
-
80052230218
-
Chemical constituents of the genus Prunus and their medial properties
-
Poonam, V., Raunak, M., Kumar, G., Reddy, C.S., Jain, R., Sharma, S.K., et al. (2011). Chemical constituents of the genus Prunus and their medial properties. Curr Med Chem 18, 3758-3824.
-
(2011)
Curr. Med. Chem.
, vol.18
, pp. 3758-3824
-
-
Poonam, V.1
Raunak, M.2
Kumar, G.3
Reddy, C.S.4
Jain, R.5
Sharma, S.K.6
-
110
-
-
4644278555
-
-
Blackwell Publishing, Oxford, UK)
-
Primrose, S.B., and Twyman, R.M. (2004). Principles of Genome Analysis and Genomics (Blackwell Publishing, Oxford, UK), 263 p.p.
-
(2004)
Principles of Genome Analysis and Genomics
, pp. 263
-
-
Primrose, S.B.1
Twyman, R.M.2
-
111
-
-
84860737554
-
Plant breeding: A success story to be continued thanks to the advances in genomics
-
Prohens, J. (2011). Plant breeding: A success story to be continued thanks to the advances in genomics. Front Plant Sci 2, 51.
-
(2011)
Front Plant Sci.
, vol.2
, pp. 51
-
-
Prohens, J.1
-
112
-
-
84871494559
-
Molecular biology: The central dogma
-
Available at
-
Pukkila, P.J. (2001). Molecular Biology: The Central Dogma. Encyclopedia of Life Sciences. Available at: http://www.els.net/WileyCDA/
-
(2001)
Encyclopedia of Life Sciences
-
-
Pukkila, P.J.1
-
114
-
-
28244492964
-
Microarray expression profiling resources for plant genomics
-
DOI 10.1016/j.tplants.2005.10.003, PII S1360138505002529
-
Rensink, W.A., and Buell, C.R. (2005). Microarray expression profiling resources for plant genomics. Trends Plant Sci 10, 603-609. (Pubitemid 41714016)
-
(2005)
Trends in Plant Science
, vol.10
, Issue.12
, pp. 603-609
-
-
Rensink, W.A.1
Buell, C.R.2
-
115
-
-
83455238345
-
GC-contnet normalization for RNA-Seq
-
Risso, D., Schwartz, K., Scherlock, G., and Dudoit, S. (2011). GC-contnet normalization for RNA-Seq. BMC Bioinformatics 12, 480.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 480
-
-
Risso, D.1
Schwartz, K.2
Scherlock, G.3
Dudoit, S.4
-
116
-
-
79952709611
-
Improving RNA-Seq expression estimates by correcting for fragment bias
-
Roberts, A., Trapnell, C., Donaghey, J., Rinn, J.L., and Pachter, L. (2011). Improving RNA-Seq expression estimates by correcting for fragment bias. Genome Biol 12, R22.
-
(2011)
Genome Biol.
, vol.12
-
-
Roberts, A.1
Trapnell, C.2
Donaghey, J.3
Rinn, J.L.4
Pachter, L.5
-
117
-
-
79951797073
-
On origin of genetic code and tRNA before translation
-
Rodin, A.S., Szathmárry, E., Rodin, S. (2011). On origin of genetic code and tRNA before translation. Biol Direct 6, 14.
-
(2011)
Biol. Direct.
, vol.6
, pp. 14
-
-
Rodin, A.S.1
Szathmárry, E.2
Rodin, S.3
-
118
-
-
33645979633
-
Level and transmission of genetic heterozygosity in apricot, explored by simple sequence repeat markers
-
Sánchez-Pérez, R., Martínez-Gómez, P. Dicenta, F., Egea, J., and Ruiz, D. (2006). Level and transmission of genetic heterozygosity in apricot, explored by simple sequence repeat markers. Gen Res Crop Evol 53, 763-770.
-
(2006)
Gen. Res. Crop. Evol.
, vol.53
, pp. 763-770
-
-
Sánchez-Pérez, R.1
Martínez-Gómez P. Dicenta, F.2
Egea, J.3
Ruiz, D.4
-
119
-
-
0017367852
-
Nucleotide sequence of bacteriophage phiX174 DNA
-
DOI 10.1038/265687a0
-
Sanger, F., Air, B.G., Barrel, N.L., Brown, A.R., Coulson, J.C., Fiddes, C.A., et al. (1977). Nucleotide sequence of the bacteriophage phiX174 NDA. Nature 265, 687-695. (Pubitemid 8039446)
-
(1977)
Nature
, vol.265
, Issue.5596
, pp. 687-695
-
-
Sanger, F.1
Air, G.M.2
Barrell, B.G.3
-
120
-
-
33947307759
-
Plant metabolomics: Towards biological function and mechanism
-
DOI 10.1016/j.tplants.2006.08.007, PII S1360138506002238
-
Schauer, N., and Fernie, A.R. (2006). Plant metabolomics: Towards biological function and mechanism. Trends Plant Sci 11, 508-516. (Pubitemid 44443000)
-
(2006)
Trends in Plant Science
, vol.11
, Issue.10
, pp. 508-516
-
-
Schauer, N.1
Fernie, A.R.2
-
121
-
-
53649106195
-
Next generation DNA sequencing
-
Schendure, J., and Li, H. (2008). Next generation DNA sequencing. Nat Biotechnol 26, 1135-1145.
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 1135-1145
-
-
Schendure, J.1
Li, H.2
-
122
-
-
34848874776
-
Gene and genon concept: Coding versus regulation
-
Scherrer, K., & Jost, J. (2007a). Gene and genon concept: Coding versus regulation. Theory Biosci 126, 65-113.
-
(2007)
Theory Biosci.
, vol.126
, pp. 65-113
-
-
Scherrer, K.1
Jost, J.2
-
123
-
-
33947230521
-
Gene and genon concept: A functional and information-theoretic analysis
-
Scherrer, K., and Jost, J. (2007b). Gene and genon concept: A functional and information-theoretic analysis. Mol Syst Biol 3, 87.
-
(2007)
Mol. Syst. Biol.
, vol.3
, pp. 87
-
-
Scherrer, K.1
Jost, J.2
-
124
-
-
79956043300
-
Silencing of soybean seed storage proteins results in a rebalanced protein composition preserving seed protein content without major collateral changes in the metabolome and transcriptome
-
Schmidt, M.A., Barbazuk, B., Sandford, M., May, G., Song, Z., and Zhou, W. (2011). Silencing of soybean seed storage proteins results in a rebalanced protein composition preserving seed protein content without major collateral changes in the metabolome and transcriptome. Plant Physiol 156, 330-345.
-
(2011)
Plant Physiol.
, vol.156
, pp. 330-345
-
-
Schmidt, M.A.1
Barbazuk, B.2
Sandford, M.3
May, G.4
Song, Z.5
Zhou, W.6
-
125
-
-
37749031255
-
Next-generation sequencing transforms today's biology
-
Schuster, S.C. (2008). Next-generation sequencing transforms today's biology. Nat Methods 5, 16-18.
-
(2008)
Nat. Methods
, vol.5
, pp. 16-18
-
-
Schuster, S.C.1
-
126
-
-
79551632681
-
Detection and removal biases in the analysis of next generation sequencing reads
-
Schwartz, S., Oren, R., and Ast, G. (2011). Detection and removal biases in the analysis of next generation sequencing reads. PloS ONE 6, e16685.
-
(2011)
Plos One
, vol.6
-
-
Schwartz, S.1
Oren, R.2
Ast, G.3
-
127
-
-
53649106195
-
Next-generation DNA sequencing
-
Shendure, J., and Li, H. (2008). Next-generation DNA sequencing. Nat Biotechnol 26, 1135-1145.
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 1135-1145
-
-
Shendure, J.1
Li, H.2
-
128
-
-
79952045110
-
Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds
-
Shi, C.Y., Yang, H., Wei, C.L., Yu, O., Zhang, Z.Z., Jiang, C.J., et al. (2011). Deep sequencing of the Camellia sinensis transcriptome revealed candidate genes for major metabolic pathways of tea-specific compounds. BMC Genomis 12, 131.
-
(2011)
BMC Genomis
, vol.12
, pp. 131
-
-
Shi, C.Y.1
Yang, H.2
Wei, C.L.3
Yu, O.4
Zhang, Z.Z.5
Jiang, C.J.6
-
129
-
-
51549102679
-
Multiple models for Rosaceae genomics
-
DOI 10.1104/pp.107.115618
-
Shulaev, V., Korban, S.S., Sosinski, B., Abbott, A.G., Aldwinckle, H.S., Folta, K.M., et al. (2008). Multiple models for Rosaceae genomics. Plant Physiol 147, 985-1003. (Pubitemid 352844258)
-
(2008)
Plant Physiology
, vol.147
, Issue.3
, pp. 985-1003
-
-
Shulaev, V.1
Korban, S.S.2
Sosinski, B.3
Abbott, A.G.4
Aldwinckle, H.S.5
Folta, K.M.6
Iezzoni, A.7
Main, D.8
Arus, P.9
Dandekar, A.M.10
Lewers, K.11
Brown, S.K.12
Davis, T.M.13
Gardiner, S.E.14
Potter, D.15
Veilleux, R.E.16
-
130
-
-
84155163837
-
Measurements of genomic content in plant genomes with flow cytometry: A test for reliability
-
Smarda, P., Bures, P., Smerda, J., and Horová , L. (2012). Measurements of genomic content in plant genomes with flow cytometry: A test for reliability. New Phytol 193, 513-521.
-
(2012)
New Phytol.
, vol.193
, pp. 513-521
-
-
Smarda, P.1
Bures, P.2
Smerda, J.3
Horová, L.4
-
131
-
-
33847363576
-
Application of amplified fragment length polymorphism (AFLPs) analysis to plant breeding and genetics: Procedures, applications and prospects
-
Sorkheh, K., Shiraz, B., Aranzana, M.J., Mohammadi, S.A., and Martínez-Gómez, P. (2007). Application of amplified fragment length polymorphism (AFLP) analysis to plant breeding and genetics: Procedures, applications and prospects. J Food Agr Environ 5, 197-204. (Pubitemid 46347758)
-
(2007)
Journal of Food, Agriculture and Environment
, vol.5
, Issue.1
, pp. 197-204
-
-
Sorkheh, K.1
Shiran, B.2
Aranzana, M.J.3
Mohammadi, S.A.4
Martinez-Gomez, P.5
-
132
-
-
62549133032
-
Linkage disequilibrium, genetic association mapping and gene localization in crop plants
-
Sorkheh, K., Malysheva-Otto, L.V., Wirthensohn, M.G., Tarkesh-Esfahani, S., and Martínez-Gómez, P. (2008). Linkage disequilibrium, genetic association mapping and gene localization in crop plants. Genet Mol Biol 31, 805-814.
-
(2008)
Genet. Mol. Biol.
, vol.31
, pp. 805-814
-
-
Sorkheh, K.1
Malysheva-Otto, L.V.2
Wirthensohn, M.G.3
Tarkesh-Esfahani, S.4
Martínez-Gómez, P.5
-
133
-
-
69949114681
-
Rosaceae: Rosaceaous genome sequencing: Perspectives and progress
-
K.M. Folta and S.E. Gardiner, eds. Springer, Heidelberg, Germany)
-
Sosinski, B., Shualev, V., Dhingra, A., Kalyanaraman, A., Bumgarner, R., Rokhsar, D., et al. (2009). Rosaceae: Rosaceaous genome sequencing: Perspectives and progress. In Genetics and Genomics of Rosaceae. K.M. Folta and S.E. Gardiner, eds. (Springer, Heidelberg, Germany), pp. 601-615.
-
(2009)
Genetics and Genomics of Rosaceae
, pp. 601-615
-
-
Sosinski, B.1
Shualev, V.2
Dhingra, A.3
Kalyanaraman, A.4
Bumgarner, R.5
Rokhsar, D.6
-
134
-
-
84860768740
-
A first draft of the peach genome sequence and its use for genetic diversity analysis in peach
-
and The International Peach Genome Initiative. November 2010. Stellenbosch South Africa.
-
Sosinski, B., Verde, I., Morgante, M., Rokhsar, D., and The International Peach Genome Initiative. (2010). A first draft of the peach genome sequence and its use for genetic diversity analysis in peach. 5th International Rosaceae Genomics Conference. November 2010. Stellenbosch, South Africa. O46.
-
(2010)
5th International Rosaceae Genomics Conference
-
-
Sosinski, B.1
Verde, I.2
Morgante, M.3
Rokhsar, D.4
-
135
-
-
73949153320
-
Defining genes: A computational framework
-
Stadler, P.F., Prohaska, S.J., Forst, C.V., and Krakauer, D.C. (2009). Defining genes: A computational framework. Theory Biosci 128, 165-170.
-
(2009)
Theory Biosci.
, vol.128
, pp. 165-170
-
-
Stadler, P.F.1
Prohaska, S.J.2
Forst, C.V.3
Krakauer, D.C.4
-
137
-
-
84871491300
-
Resequencing of a peach genotype and SNP development for mapping and genetic diversity analysis
-
November 2010.Stellenbosch South Africa.
-
Tartarini, S., Dondini, L., Paris, R., Pagliarini, G., Venturi, S., Sansavini, S., et al. (2010). Resequencing of a peach genotype and SNP development for mapping and genetic diversity analysis. 5th International Rosaceae Genomics Conference. November 2010. Stellenbosch, South Africa. P45.
-
(2010)
5th International Rosaceae Genomics Conference
-
-
Tartarini, S.1
Dondini, L.2
Paris, R.3
Pagliarini, G.4
Venturi, S.5
Sansavini, S.6
-
138
-
-
77957575796
-
Construction of an almond linkage map in an Australian population Nonpareil Lauranne
-
Tavassolian, I., Rabiei, G., Gregory, D., Mnejja, M., Wirthensohn, M.G., Hunt, P.W., et al. (2010). Construction of an almond linkage map in an Australian population Nonpareil Lauranne. BMC Genomics 11, 551-561.
-
(2010)
BMC Genomics
, vol.11
, pp. 551-561
-
-
Tavassolian, I.1
Rabiei, G.2
Gregory, D.3
Mnejja, M.4
Wirthensohn, M.G.5
Hunt, P.W.6
-
139
-
-
68949217794
-
Selection of reliable reference genes for gene expression studies in peach using real-time PCR
-
Tong, Z., Gao, Z., Wang, F., Zhou, J., and Zang, Z. (2009). Selection of reliable reference genes for gene expression studies in peach using real-time PCR. BMC Mol Biol 10, 71.
-
(2009)
BMC Mol. Biol.
, vol.10
, pp. 71
-
-
Tong, Z.1
Gao, Z.2
Wang, F.3
Zhou, J.4
Zang, Z.5
-
140
-
-
33847307152
-
OmicBrowse: A browser of multidimensional omics annotations
-
Toyoda, T., Mochizuhi, Y., Player, K., Heida, N., Kobayashi, N., and Sakaki, Y. (2006). OmicBrowse: A browser of multidimensional omics annotations. Bioinformatics 23, 524-526.
-
(2006)
Bioinformatics
, vol.23
, pp. 524-526
-
-
Toyoda, T.1
Mochizuhi, Y.2
Player, K.3
Heida, N.4
Kobayashi, N.5
Sakaki, Y.6
-
142
-
-
84900286587
-
-
Springer, New York)
-
Valdyanathan, S., Harrigan, G.G., and Goodacre, R. (eds.). (2005). Metabolome Analyses. Strategies for Systems Biology (Springer, New York), 394 p.p.
-
(2005)
Metabolome Analyses. Strategies for Systems Biology
, pp. 394
-
-
Valdyanathan, S.1
Harrigan, G.G.2
Goodacre, R.3
-
143
-
-
0343025563
-
The law of homologous series in variation
-
Vavilov, N.I. (1922). The law of homologous series in variation. J Genet 12, 47-89.
-
(1922)
J. Genet.
, vol.12
, pp. 47-89
-
-
Vavilov, N.I.1
-
144
-
-
0002951655
-
The origin, variation, immunity and breeding of cultivated plants
-
(translated by K. Starr Chester
-
Vavilov, N.I. (1951). The origin, variation, immunity and breeding of cultivated plants (translated by K. Starr Chester). Chron Bot 13, 1-366.
-
(1951)
Chron. Bot.
, vol.13
, pp. 1-366
-
-
Vavilov, N.I.1
-
145
-
-
0031442518
-
Characterization of the yeast transcriptome
-
DOI 10.1016/S0092-8674(00)81845-0
-
Velculescu, V.E., Zhang, L., Zhou, W., Vogelstein, J., Basrai, M.A., Bassett, D.E., et a. (1997). Characterization of the yeast transcriptome. Cell 88, 243-251. (Pubitemid 28015873)
-
(1997)
Cell
, vol.88
, Issue.2
, pp. 243-251
-
-
Velculescu, V.E.1
Zhang, L.2
Zhou, W.3
Vogelstein, J.4
Basrai, M.A.5
Bassett Jr., D.E.6
Hieter, P.7
Vogelstein, B.8
Kinzler, K.W.9
-
146
-
-
84871510930
-
Whole genome SNP identification in peach germplasm and Prunus genus using next generation sequencing platform
-
November 2010. Stellenbosch South Africa. O49
-
Verde, I., Cattorano, F., Scalabarini, S., Vendramin, E., Policriti, A., Del Fabbro, C., et al. (2010). Whole genome SNP identification in peach germplasm and Prunus genus using next generation sequencing platform. 5th International Rosaceae Genomics Conference. November 2010. Stellenbosch, South Africa. O49.
-
(2010)
5th International Rosaceae Genomics Conference
-
-
Verde, I.1
Cattorano, F.2
Scalabarini, S.3
Vendramin, E.4
Policriti, A.5
Del Fabbro, C.6
-
147
-
-
80052060086
-
Whole genome resequencing reveals a reduced nucleotide variability in peach
-
XIX Conference. January 2011. San Diego, USA.
-
Verde, I., Cattorano, F., Scalabarini, S., Vendramin, E., Policriti, A., Del Fabbro, C., et al. (2011). Whole genome resequencing reveals a reduced nucleotide variability in peach. Plant & Animal Genome XIX Conference. January 2011. San Diego, USA. W249.
-
(2011)
Plant & Animal Genome
, Issue.W249
-
-
Verde, I.1
Cattorano, F.2
Scalabarini, S.3
Vendramin, E.4
Policriti, A.5
Del Fabbro, C.6
-
148
-
-
57749195712
-
RNA-Seq: A revolutionary tool for transcriptomic
-
Wang, Z., Gerstein, M., and Snyder, M. (2009). RNA-Seq: A revolutionary tool for transcriptomic. Nat Rev Genet 10, 57-63.
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 57-63
-
-
Wang, Z.1
Gerstein, M.2
Snyder, M.3
-
149
-
-
0002115346
-
Cherry, plum, peach, apricot and almond
-
N.W. Simmonds, e.d. Longman London)
-
Watkins, R. (1976). Cherry, plum, peach, apricot and almond. In: Evolution of Crop Plants. N.W. Simmonds, ed. (Longman, London), pp. 120-135.
-
(1976)
Evolution of Crop Plants
, pp. 120-135
-
-
Watkins, R.1
-
150
-
-
0038497542
-
Molecular structure of nucleic acids: A structure for deoxyribose nucleic acid
-
Watson, J.D., and Crick, F.H.C. (1953). Molecular structure of nucleic acids: A structure for deoxyribose nucleic acid. Nature 171, 737-738.
-
(1953)
Nature
, vol.171
, pp. 737-738
-
-
Watson, J.D.1
Crick, F.H.C.2
-
151
-
-
0037959898
-
Emerging use of gene expression microarrays in plant physiology
-
Wullschleger, M., and Difazio, T.D. (2003). Emerging use of gene expression microarrays in plant physiology. Comp Funt Genet 4, 216-224.
-
(2003)
Comp. Funt Genet.
, vol.4
, pp. 216-224
-
-
Wullschleger, M.1
Difazio, T.D.2
-
152
-
-
0036736348
-
Microsatellite markers in peach [Prunus persica (L) Batsch] derived from an enriched genomic and cDNA libraries
-
Yamamoto, T., Mochida, K., Imai, T., Shi, I.Z., Ogiwara, I., and Hayashi, T. (2002). Microsatellite markers in peach [Prunus persica (L.) Batsch] derived from an enriched genomic and cDNA libraries. Mol Ecol Notes 2, 298-302.
-
(2002)
Mol. Ecol. Notes
, vol.2
, pp. 298-302
-
-
Yamamoto, T.1
Mochida, K.2
Imai, T.3
Shi, I.Z.4
Ogiwara, I.5
Hayashi, T.6
-
153
-
-
34848925793
-
Mapping the genome landscape using tiling array technology
-
DOI 10.1016/j.pbi.2007.07.006, PII S136952660700088X, Cell Signalling and Gene Regulation Edited by Jian-Kang Zhu and Ko Shimamoto
-
Yazaki, J., Gregory, B.D., and Ecker, J.R. (2007). Mapping the genome landscape using tiling array technology. Curr Opin Plant Biol 10, 534-542. (Pubitemid 47503881)
-
(2007)
Current Opinion in Plant Biology
, vol.10
, Issue.5
, pp. 534-542
-
-
Yazaki, J.1
Gregory, B.D.2
Ecker, J.R.3
-
154
-
-
84861479079
-
Plum pox virus silencing of C5 transgenic plums is stable under challenge inoculation with heterologous viruses
-
Zagrai, I., Capote, N., Ravelonandro, M., Cambra, M., Zagrai, L., and Scorza, R. (2008). Plum pox virus silencing of C5 transgenic plums is stable under challenge inoculation with heterologous viruses. J Plant Pathol 90, S1.63-S1.71.
-
(2008)
J. Plant Pathol.
, vol.90
-
-
Zagrai, I.1
Capote, N.2
Ravelonandro, M.3
Cambra, M.4
Zagrai, L.5
Scorza, R.6
-
155
-
-
84860485003
-
Optimizing De novo transcriptome assembly from short-read RNA-Seq data: A comparative study
-
Zhao, Q.J., Wang, Y., Kong, Y.M., Li, Y., and Hao, P. (2011). Optimizing De novo transcriptome assembly from short-read RNA-Seq data: A comparative study. BMC Bioinformatics 12, S2.
-
(2011)
BMC Bioinformatics
, vol.12
-
-
Zhao, Q.J.1
Wang, Y.2
Kong, Y.M.3
Li, Y.4
Hao, P.5
-
156
-
-
46849103855
-
Transcriptome profiling of ripening nectarine (Prunus persica L. Batsch) fruit treated with 1-MCP
-
DOI 10.1093/jxb/ern136
-
Ziliotto, F., Begheldo, M., Rasori, A., Bonghi, C., and Tonutti, P. (2008). Transcriptome profiling of ripening nectarine (Prunus persica L. Batsch) fruit treated with 1-MCP. J Exp Bot 59, 2781-2791. (Pubitemid 351957496)
-
(2008)
Journal of Experimental Botany
, vol.59
, Issue.10
, pp. 2781-2791
-
-
Ziliotto, F.1
Begheldo, M.2
Rasori, A.3
Bonghi, C.4
Tonutti, P.5
|