Analysis of selective, high protein-protein binding interaction of cohesin-dockerin complex using biosensing methods

Biosensors and Bioelectronics

Volumn 35, Issue 1, 2012, Pages 382-389

  Jeon, Sang Duck ^a   Lee, Ji Eun ^a   Kim, Su Jung ^a   Kim, Seung Wook ^a   Han, Sung Ok ^a  

^a Korea University   (South Korea)

Author keywords

Biomarker; Fluorescence; Optical biosensor; Protein protein interaction; Surface plasmon resonance

Indexed keywords

2D-PAGE; ANAEROBIC BACTERIUM; BINDING PATTERN; BINDING PROFILES; BINDING PROPERTIES; BIOSENSING; CARBON SOURCE; CELL SURFACES; CELLULOLYTIC ENZYME; CELLULOSOMES; CLOSTRIDIUM CELLULOVORANS; COHESINS; FLUORESCENCE INTENSITIES; MULTI-PROTEIN COMPLEX; OPTICAL BIO-SENSORS; PROTEIN-PROTEIN BINDING; PROTEIN-PROTEIN INTERACTIONS; SCAFFOLDING PROTEINS; SURFACE PLASMON RESONANCE (SPR); TARGET MATERIALS;

BAST FIBERS; BINDING ENERGY; BIOLOGICAL MATERIALS; BIOMARKERS; BIOSENSORS; CELL MEMBRANES; FLUORESCENCE; SURFACE PLASMON RESONANCE;

PROTEINS;

BIOLOGICAL MARKER; CARRIER PROTEINS AND BINDING PROTEINS; CELLULOLYTIC ENZYME; COHESIN; DOCKERIN; FLUORESCENT DYE; MICROCRYSTALLINE CELLULOSE; UNCLASSIFIED DRUG; XYLAN;

ANAEROBIC BACTERIUM; ARTICLE; CARBON SOURCE; CLOSTRIDIUM CELLULOVORANS; CONTROLLED STUDY; ENZYME ASSAY; ENZYME LINKED INTERACTION ASSAY; FLUORESCENCE; NONHUMAN; OPTICAL BIOSENSOR; POLYACRYLAMIDE GEL ELECTROPHORESIS; PROTEIN BINDING; PROTEIN PROTEIN INTERACTION; SURFACE PLASMON RESONANCE;

BACTERIAL PROTEINS; BASE SEQUENCE; BIOSENSING TECHNIQUES; CELL CYCLE PROTEINS; CELLULOSOMES; CHROMOSOMAL PROTEINS, NON-HISTONE; CLOSTRIDIUM CELLULOVORANS; DNA PRIMERS; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; FLUORESCENT DYES; PROTEIN BINDING; PROTEIN MULTIMERIZATION; SURFACE PLASMON RESONANCE;

CLOSTRIDIUM CELLULOVORANS;

EID: 84860542342     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2012.03.023     Document Type: Article

References (32)

1. Arai T., Kosugi A., Chan H., Koukiekolo R., Yukawa H., Inui M., Doi R.H. Appl. Microbiol. Biotechnol. 2006, 71(5):654-660.
2. Bayer E.A., Setter E., Lamed R. J. Bacteriol. 1985, 163(2):552-559.
3. Bradford M.M. Anal. Biochem. 1976, 72(7):248-254.
4. Byfield M.P., Abuknesha R.A. Biosens. Bioelectron. 1994, 9(4):373-400.
5. Cho W., Jeon S.D., Shim H.J., Doi R.H., Han S.O. J. Biotechnol. 2010, 145(3):233-239.
6. Demishtein A., Karpol A., Barak Y., Lamed R., Bayer E.A. J. Mol. Recognit. 2010, 23(6):525-535.
7. Doi R.H. Ann. N. Y. Acad. Sci. 2008, 1125(1):267-279.
8. Doi R.H., Goldstein M., Hashida S., Park J.S., Takagi M. Crit. Rev. Microbiol. 1994, 20(2):87-93.
9. Doi R.H., Kosugi A., Murashima K., Tamaru Y., Han S.O. J. Bacteriol. 2003, 185(20):5907-5914.
10. Fendri I., Tardif C., Fierobe H.P., Lignon S., Valette O., Pages S., Perret S. FEBS J. 2009, 276(11):3076-3086.
11. Fierobe H.P., Pages S., Belaich A., Champ S., Lexa D., Belaich J.P. Biochemistry 1999, 38(39):12822-28321.
12. Han S.O., Cho H.-Y., Yukawa H., Inui M., Doi R.H. J. Bacteriol. 2004, 186(13):4218-4227.
13. Han S.O., Yukawa H., Inui M., Doi R.H. J. Bacteriol. 2004, 186(24):8347-8355.
14. Han S.O., Yukawa H., Inui M., Doi R.H. Microbiology 2005, 151(5):1491-1497.
15. Jeon S.D., Yu K.O., Kim S.W., Han S.O. Appl. Microbiol. Biotechnol. 2011, 90(2):565-572.
16. Jeon S.D., Yu K.O., Kim S.W., Han S.O. N. Biotechnol. 2011, 29(3):365-371.
17. Jindou S., Soda A., Karita S., Kajino T., Beguin P., Wu J.H., Inagaki M., Kimura T., Sakka K., Ohmiya K. J. Biol. Chem. 2004, 279(11):9867-9874.
18. Kakiuchi M., Isui A., Suzuki K., Fujino T., Fujino E., Kimura T., Karita S., Sakka K., Ohmiya K. J. Bacteriol. 1998, 180(16):4303-4308.
19. Kosugi A., Murashima K., Doi R.H. J. Bacteriol. 2002, 184(24):6859-6865.
20. Murashima K., Kosugi A., Doi R.H. J. Bacteriol. 2002, 184(18):5088-5095.
21. Pages S., Belaich A., Tardif C., Reverbel-Leroy C., Gaudin C., Belaich J.P. J. Bacteriol. 1996, 178(8):2279-2286.
22. Park J.S., Matano Y., Doi R.H. J. Bacteriol. 2001, 183(18):5431-5435.
23. Sakka K., Kishino Y., Sugihara Y., Jindou S., Sakka M., Inagaki M., Kimura T. FEMS Microbiol. Lett. 2009, 300(2):249-255.
24. Sakka K., Sugihara Y., Jindou S., Sakka M., Inagaki M., Kimura T. FEMS Microbiol. Lett. 2011, 314(1):75-80.
25. Sakka K., Sugihara Y., Jindou S., Sakka M., Inagaki M., Sakka K., Kimura T. FEMS Microbiol. Lett. 2010, 314(1):75-80.
26. Shoseyov O., Doi R.H. Proc. Natl. Acad. Sci. U.S.A. 1990, 87(6):2192-2195.
27. Sleat R., Mah R.A., Robinson R. Appl. Environ. Microbiol. 1984, 48(1):88-93.
28. Steenbakkers P.J., Irving J.A., Harhangi H.R., Swinkels W.J., Akhmanova A., Dijkerman R., Jetten M.S., van der Drift C., Whisstock J.C., Op den Camp H.J. Mycol. Res. 2008, 112(8):999-1006.
29. Su L., Jia W., Hou C., Lei Y. Biosens. Bioelectron. 2011, 26(5):1788-1799.
30. Wang R., Lajevardi-Khosh A., Choi S., Chae J. Biosens. Bioelectron. 2011, 28(1):304-307.
31. Wilson G.S., Gifford R. Biosens. Bioelectron. 2005, 20(12):2388-2403.
32. Yaron S., Morag E., Bayer E.A., Lamed R., Shoham Y. FEBS Lett. 1995, 360(2):121-124.