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Volumn 186, Issue 13, 2004, Pages 4218-4227

Regulation of expression of cellulosomes and noncellulosomal (hemi)cellulolytic enzymes in Clostridium cellulovorans during growth on different carbon sources

Author keywords

[No Author keywords available]

Indexed keywords

CELLULASE; CELLULOSE; CELLULOSOME; PECTIN; XYLAN;

EID: 3042608381     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.186.13.4218-4227.2004     Document Type: Article
Times cited : (51)

References (48)
  • 1
    • 0018084288 scopus 로고
    • Analytical techniques for cell fractions. XXI. Two-dimensional analysis of serum and tissue proteins: Multiple isoelectric focusing
    • Anderson, N. G., and N. L. Anderson, 1978. Analytical techniques for cell fractions. XXI. Two-dimensional analysis of serum and tissue proteins: multiple isoelectric focusing. Anal. Biochem. 85:331-340.
    • (1978) Anal. Biochem. , vol.85 , pp. 331-340
    • Anderson, N.G.1    Anderson, N.L.2
  • 2
    • 0003278764 scopus 로고    scopus 로고
    • Cellulose-decomposing bacteria and their enzyme systems
    • M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer, and E. Stackebrandt (ed.). Springer-Verlag, New York, N.Y.
    • Bayer, E. A., Y. Shoham, and R. Lamed. 2000. Cellulose-decomposing bacteria and their enzyme systems, p. 1-74. In M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer, and E. Stackebrandt (ed.), The prokaryotes: an evolving electronic resource for the microbiological community, 3rd ed. Springer-Verlag, New York, N.Y.
    • (2000) The Prokaryotes: An Evolving Electronic Resource for the Microbiological Community, 3rd Ed. , pp. 1-74
    • Bayer, E.A.1    Shoham, Y.2    Lamed, R.3
  • 3
    • 0033564316 scopus 로고    scopus 로고
    • Digestion of crystalline cellulose substrates by the Clostridium thermocellum cellulosome: Structural and morphological aspects
    • Boisset, C., H. Chanzy, B. Henrissat, R. Lamed, Y. Shoham, and E. A. Bayer. 1999. Digestion of crystalline cellulose substrates by the Clostridium thermocellum cellulosome: structural and morphological aspects. Biochem. J. 340: 829-835.
    • (1999) Biochem. J. , vol.340 , pp. 829-835
    • Boisset, C.1    Chanzy, H.2    Henrissat, B.3    Lamed, R.4    Shoham, Y.5    Bayer, E.A.6
  • 4
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • Bradford, M. M. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal. Biochem. 72:248-254.
    • (1976) Anal. Biochem. , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 7
    • 0035747257 scopus 로고    scopus 로고
    • The Clostridium cellulovorans cellulosome: An enzyme complex with plant cell wall degrading activity
    • Doi, R. H., and Y. Tamaru. 2001. The Clostridium cellulovorans cellulosome: an enzyme complex with plant cell wall degrading activity. Chem. Rec. 1:24-32.
    • (2001) Chem. Rec. , vol.1 , pp. 24-32
    • Doi, R.H.1    Tamaru, Y.2
  • 8
    • 0031826505 scopus 로고    scopus 로고
    • An improved process for isolation of corn fiber gum
    • Doner, L. W., H. K. Chau, M. L. Fishman, and K. B. Hicks. 1998. An improved process for isolation of corn fiber gum. Cereal Chem. 75:408-411.
    • (1998) Cereal Chem. , vol.75 , pp. 408-411
    • Doner, L.W.1    Chau, H.K.2    Fishman, M.L.3    Hicks, K.B.4
  • 9
    • 0030826496 scopus 로고    scopus 로고
    • Isolation of hemicellulose from corn fiber by alkaline hydrogen peroxide extraction
    • Doner, L. W., and K. B. Hicks. 1997. Isolation of hemicellulose from corn fiber by alkaline hydrogen peroxide extraction. Cereal Chem. 74:176-181.
    • (1997) Cereal Chem. , vol.74 , pp. 176-181
    • Doner, L.W.1    Hicks, K.B.2
  • 10
    • 0034823136 scopus 로고    scopus 로고
    • Analysis and properties of arabinoxylans from discrete com wet-milling fiber fractions
    • Doner, L. W., D. B. Johnston, and V. Singh. 2001. Analysis and properties of arabinoxylans from discrete com wet-milling fiber fractions. J. Agric. Food. Chem. 49:1266-1269.
    • (2001) J. Agric. Food. Chem. , vol.49 , pp. 1266-1269
    • Doner, L.W.1    Johnston, D.B.2    Singh, V.3
  • 11
    • 0025876050 scopus 로고
    • Nucleotide sequence and characteristics of endoglucanase gene engB from Clostridium cellulovorans
    • Foong, F., T. Hamamoto, O. Shoseyov, and R. H. Doi. 1991. Nucleotide sequence and characteristics of endoglucanase gene engB from Clostridium cellulovorans. J. Gen. Microbiol. 137:1729-1736.
    • (1991) J. Gen. Microbiol. , vol.137 , pp. 1729-1736
    • Foong, F.1    Hamamoto, T.2    Shoseyov, O.3    Doi, R.H.4
  • 13
    • 0023429067 scopus 로고
    • Regulation and initiation of cenB transcripts of Cellulomonas fimi
    • Greenberg, N. M., R. A. Warren, D. G. Kilburn, and R. C. Miller, Jr. 1987. Regulation and initiation of cenB transcripts of Cellulomonas fimi. J. Bacteriol. 169:4674-4677.
    • (1987) J. Bacteriol. , vol.169 , pp. 4674-4677
    • Greenberg, N.M.1    Warren, R.A.2    Kilburn, D.G.3    Miller Jr., R.C.4
  • 14
    • 0026548466 scopus 로고
    • Analysis of functional domains of endoglucanases from Clostridium cellulovorans by gene cloning, nucleotide sequencing and chimeric protein construction
    • Hamamoto, T., F. Foong, O. Shoseyov, and R. H. Doi. 1992. Analysis of functional domains of endoglucanases from Clostridium cellulovorans by gene cloning, nucleotide sequencing and chimeric protein construction. Mol. Gen. Genet. 231:472-479.
    • (1992) Mol. Gen. Genet. , vol.231 , pp. 472-479
    • Hamamoto, T.1    Foong, F.2    Shoseyov, O.3    Doi, R.H.4
  • 15
    • 0025165567 scopus 로고
    • A Clostridium cellulovorans gene, engD, codes for both endo-β-1,4-glucanase and cellobiosidase activities
    • Hamamoto, T., O. Shoseyov, F. Foong, and R. H. Doi. 1990. A Clostridium cellulovorans gene, engD, codes for both endo-β-1,4-glucanase and cellobiosidase activities. FEMS Microbiol. Lett. 72:285-288.
    • (1990) FEMS Microbiol. Lett. , vol.72 , pp. 285-288
    • Hamamoto, T.1    Shoseyov, O.2    Foong, F.3    Doi, R.H.4
  • 16
    • 0141995009 scopus 로고    scopus 로고
    • Regulation of expression of cellulosomal cellulase and hemicellulase genes in Clostridium cellulovorans
    • Han, S. O., H. Yukawa, M. Inui, and R. H. Doi. 2003. Regulation of expression of cellulosomal cellulase and hemicellulase genes in Clostridium cellulovorans. J. Bacteriol. 185:6067-6075.
    • (2003) J. Bacteriol. , vol.185 , pp. 6067-6075
    • Han, S.O.1    Yukawa, H.2    Inui, M.3    Doi, R.H.4
  • 17
    • 0344838397 scopus 로고    scopus 로고
    • Transcription of Clostridium cellulovorans cellulosomal cellulase and hemicellulase genes
    • Han, S. O., H. Yukawa, M. Inui, and R. H. Doi. 2003. Transcription of Clostridium cellulovorans cellulosomal cellulase and hemicellulase genes. J. Bacteriol. 185:2520-2527.
    • (2003) J. Bacteriol. , vol.185 , pp. 2520-2527
    • Han, S.O.1    Yukawa, H.2    Inui, M.3    Doi, R.H.4
  • 18
    • 0030944352 scopus 로고    scopus 로고
    • Regulation of cellulase gene expression in the filamentous fungus Trichoderma reesei
    • Ilmen, M., A. Saloheimo, M. L. Onnela, and M. E. Penttila. 1997. Regulation of cellulase gene expression in the filamentous fungus Trichoderma reesei. Appl. Environ. Microbiol. 63:1298-1306.
    • (1997) Appl. Environ. Microbiol. , vol.63 , pp. 1298-1306
    • Ilmen, M.1    Saloheimo, A.2    Onnela, M.L.3    Penttila, M.E.4
  • 19
    • 0036952134 scopus 로고    scopus 로고
    • Characterization of two noncellulosomal subunits, ArfA and BgaA, from Clostridium cellulovorans that cooperate with the cellulosome in plant cell wall degradation
    • Kosugi, A., K. Murashima, and R. H. Doi. 2002. Characterization of two noncellulosomal subunits, ArfA and BgaA, from Clostridium cellulovorans that cooperate with the cellulosome in plant cell wall degradation. J. Bacteriol. 184:6859-6865.
    • (2002) J. Bacteriol. , vol.184 , pp. 6859-6865
    • Kosugi, A.1    Murashima, K.2    Doi, R.H.3
  • 20
    • 0035209025 scopus 로고    scopus 로고
    • Characterization of xylanolytic enzymes in Clostridium cellulovorans: Expression of xylanase activity dependent on growth substrates
    • Kosugi, A., K. Murashima, and R. H. Doi. 2001. Characterization of xylanolytic enzymes in Clostridium cellulovorans: expression of xylanase activity dependent on growth substrates. J. Bacteriol. 183:7037-7043.
    • (2001) J. Bacteriol. , vol.183 , pp. 7037-7043
    • Kosugi, A.1    Murashima, K.2    Doi, R.H.3
  • 21
    • 0036951928 scopus 로고    scopus 로고
    • Xylanase and acetyl xylan esterase activities of XynA, a key subunit of the Clostridium cellulovorans cellulosome for xylan degradation
    • Kosugi, A., K. Murashima, and R. H. Doi. 2002. Xylanase and acetyl xylan esterase activities of XynA, a key subunit of the Clostridium cellulovorans cellulosome for xylan degradation. Appl. Environ. Microbiol. 68:6399-6402.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 6399-6402
    • Kosugi, A.1    Murashima, K.2    Doi, R.H.3
  • 22
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli, U. K. 1970. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680-685.
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 23
    • 0032574650 scopus 로고    scopus 로고
    • Properties of exgS, a gene for a major subunit of the Clostridium cellulovorans cellulosome
    • Liu, C. C., and R. H. Doi. 1998. Properties of exgS, a gene for a major subunit of the Clostridium cellulovorans cellulosome. Gene 211:39-47.
    • (1998) Gene , vol.211 , pp. 39-47
    • Liu, C.C.1    Doi, R.H.2
  • 24
    • 0036431922 scopus 로고    scopus 로고
    • Regulation by carbon and nitrogen sources of a family of cellulases in Aspergillus nidulans
    • Lockington, R. A., L. Rodbourn, S. Barnett, C. J. Carter, and J. M. Kelly. 2002. Regulation by carbon and nitrogen sources of a family of cellulases in Aspergillus nidulans. Fungal Genet. Biol. 37:190-196.
    • (2002) Fungal Genet. Biol. , vol.37 , pp. 190-196
    • Lockington, R.A.1    Rodbourn, L.2    Barnett, S.3    Carter, C.J.4    Kelly, J.M.5
  • 25
    • 0027947347 scopus 로고
    • Cellulose promotes extracellular assembly of Clostridium cellulovorans cellulosomes
    • Matano, Y., J. S. Park, M. A. Goldstein, and R. H. Doi. 1994. Cellulose promotes extracellular assembly of Clostridium cellulovorans cellulosomes. J. Bacteriol. 176:6952-6956.
    • (1994) J. Bacteriol. , vol.176 , pp. 6952-6956
    • Matano, Y.1    Park, J.S.2    Goldstein, M.A.3    Doi, R.H.4
  • 26
    • 0032469479 scopus 로고    scopus 로고
    • Physiology of carbohydrate to solvent conversion by clostridia
    • Mitchell, W. J. 1998. Physiology of carbohydrate to solvent conversion by clostridia. Adv. Microb. Physiol. 39:31-130.
    • (1998) Adv. Microb. Physiol. , vol.39 , pp. 31-130
    • Mitchell, W.J.1
  • 27
    • 0029166151 scopus 로고
    • Transcriptional induction and expression of the endoglucanase celA gene from a ruminal Clostridium sp. ("C. longisporum")
    • Mittendorf, V., and J. A. Thomson. 1995. Transcriptional induction and expression of the endoglucanase celA gene from a ruminal Clostridium sp. ("C. longisporum"). J. Bacteriol. 177:4805-4808.
    • (1995) J. Bacteriol. , vol.177 , pp. 4805-4808
    • Mittendorf, V.1    Thomson, J.A.2
  • 28
    • 0036211985 scopus 로고    scopus 로고
    • Determination of subunit composition of Clostridium cellulovorans cellulosomes that degrade plant cell walls
    • Murashima, K., A. Kosugi, and R. H. Doi. 2002. Determination of subunit composition of Clostridium cellulovorans cellulosomes that degrade plant cell walls. Appl. Environ. Microbiol. 68:1610-1615.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 1610-1615
    • Murashima, K.1    Kosugi, A.2    Doi, R.H.3
  • 29
    • 0027217942 scopus 로고
    • True cellulase production by Clostridium thermocellum grown on different carbon sources
    • Nochur, S. V., M. F. Robert, and A. L. Demain. 1993. True cellulase production by Clostridium thermocellum grown on different carbon sources. Biotechnol. Lett. 15:641-646.
    • (1993) Biotechnol. Lett. , vol.15 , pp. 641-646
    • Nochur, S.V.1    Robert, M.F.2    Demain, A.L.3
  • 31
    • 0034840478 scopus 로고    scopus 로고
    • The cellulosome and cellulose degradation by anaerobic bacteria
    • Schwarz, W. H. 2001. The cellulosome and cellulose degradation by anaerobic bacteria. Appl. Microbiol. Biotechnol. 56:634-649.
    • (2001) Appl. Microbiol. Biotechnol. , vol.56 , pp. 634-649
    • Schwarz, W.H.1
  • 32
    • 0030571536 scopus 로고    scopus 로고
    • Characterization of engF, a gene for a noncellulosomal Clostridium cellulovorans endoglucanase
    • Sheweita, S. A., A. Ichi-ishi, J. S. Park, C. Liu, L. M. Malburg, Jr., and R. H. Doi. 1996. Characterization of engF, a gene for a noncellulosomal Clostridium cellulovorans endoglucanase. Gene 182:163-167.
    • (1996) Gene , vol.182 , pp. 163-167
    • Sheweita, S.A.1    Ichi-Ishi, A.2    Park, J.S.3    Liu, C.4    Malburg Jr., L.M.5    Doi, R.H.6
  • 33
    • 0025253926 scopus 로고
    • Essential 170-kDa subunit for degradation of crystalline cellulose by Clostridium cellulovorans cellulase
    • Shoseyov, O., and R. H. Doi. 1990. Essential 170-kDa subunit for degradation of crystalline cellulose by Clostridium cellulovorans cellulase. Proc. Natl. Acad. Sci. USA 87:2192-2195.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 2192-2195
    • Shoseyov, O.1    Doi, R.H.2
  • 34
    • 0026529913 scopus 로고
    • Primary sequence analysis of Clostridium cellulovorans cellulose binding protein A
    • Shoseyov, O., M. Takagi, M. A. Goldstein, and R. H. Doi. 1992. Primary sequence analysis of Clostridium cellulovorans cellulose binding protein A. Proc. Natl. Acad. Sci. USA 89:3483-3487.
    • (1992) Proc. Natl. Acad. Sci. USA , vol.89 , pp. 3483-3487
    • Shoseyov, O.1    Takagi, M.2    Goldstein, M.A.3    Doi, R.H.4
  • 35
    • 0021162470 scopus 로고
    • Isolation and characterization of an anaerobic, celluloytic bacterium, Clostridium cellulovorans sp. nov.
    • Sleat, R., R. A. Mah, and R. Robinson. 1984. Isolation and characterization of an anaerobic, celluloytic bacterium, Clostridium cellulovorans sp. nov. Appl. Environ. Microbiol. 48:88-93.
    • (1984) Appl. Environ. Microbiol. , vol.48 , pp. 88-93
    • Sleat, R.1    Mah, R.A.2    Robinson, R.3
  • 36
    • 33750423631 scopus 로고
    • Notes on sugar determination
    • Somogyi, M. 1952. Notes on sugar determination. J. Biol. Chem. 195:19-23.
    • (1952) J. Biol. Chem. , vol.195 , pp. 19-23
    • Somogyi, M.1
  • 37
    • 0004178982 scopus 로고
    • Plant and cell architecture
    • The Benjamin Cummings Publishing Company, Inc., Redwood City, Calif.
    • Taiz, L., and E. Zeiger. 1991. Plant and cell architecture, p. 9-25. In Plant physiology. The Benjamin Cummings Publishing Company, Inc., Redwood City, Calif.
    • (1991) Plant Physiology , pp. 9-25
    • Taiz, L.1    Zeiger, E.2
  • 38
    • 0033989811 scopus 로고    scopus 로고
    • The engL gene cluster of Clostridium cellulovorans contains a gene for cellulosomal manA
    • Tamaru, Y., and R. H. Doi. 2000. The engL gene cluster of Clostridium cellulovorans contains a gene for cellulosomal manA. J. Bacteriol. 182:244-247.
    • (2000) J. Bacteriol. , vol.182 , pp. 244-247
    • Tamaru, Y.1    Doi, R.H.2
  • 39
    • 0035957385 scopus 로고    scopus 로고
    • Pectate lyase A, an enzymatic subunit of the Clostridium cellulovorans cellulosome
    • Tamaru, Y., and R. H. Doi. 2001. Pectate lyase A, an enzymatic subunit of the Clostridium cellulovorans cellulosome. Proc. Natl. Acad. Sci. USA 98: 4125-4129.
    • (2001) Proc. Natl. Acad. Sci. USA , vol.98 , pp. 4125-4129
    • Tamaru, Y.1    Doi, R.H.2
  • 40
    • 0344780195 scopus 로고    scopus 로고
    • Three surface layer homology domains at the N terminus of the Clostridium cellulovorans major cellulosomal subunit EngE
    • Tamaru, Y., and R. H. Doi. 1999. Three surface layer homology domains at the N terminus of the Clostridium cellulovorans major cellulosomal subunit EngE. J. Bacteriol. 181:3270-3276.
    • (1999) J. Bacteriol. , vol.181 , pp. 3270-3276
    • Tamaru, Y.1    Doi, R.H.2
  • 41
    • 0033814145 scopus 로고    scopus 로고
    • A large gene cluster for the Clostridium cellulovorans cellulosome
    • Tamaru, Y., S. Karita, A. Ibrahim, H. Chan, and R. H. Doi. 2000. A large gene cluster for the Clostridium cellulovorans cellulosome. J. Bacteriol. 182: 5906-5910.
    • (2000) J. Bacteriol. , vol.182 , pp. 5906-5910
    • Tamaru, Y.1    Karita, S.2    Ibrahim, A.3    Chan, H.4    Doi, R.H.5
  • 42
    • 0036249969 scopus 로고    scopus 로고
    • Formation of protoplasts from cultured tobacco cells and Arabidopsis thaliana by the action of cellulosomes and pectate lyase from Clostridium cellulovorans
    • Tamaru, Y., S. Ui, K. Murashima, A. Kosugi, H. Chan, R. H. Doi, and B. Liu. 2002. Formation of protoplasts from cultured tobacco cells and Arabidopsis thaliana by the action of cellulosomes and pectate lyase from Clostridium cellulovorans. Appl. Environ. Microbiol. 68:2614-2618.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 2614-2618
    • Tamaru, Y.1    Ui, S.2    Murashima, K.3    Kosugi, A.4    Chan, H.5    Doi, R.H.6    Liu, B.7
  • 43
    • 0027421386 scopus 로고
    • Properties conferred on Clostridium thermocellum endoglucanase CelC by grafting the duplicated segment of endoglucanase CelD
    • Tokatlidis, K., P. Dhurjati, and P. Beguin. 1993. Properties conferred on Clostridium thermocellum endoglucanase CelC by grafting the duplicated segment of endoglucanase CelD. Protein Eng. 6:947-952.
    • (1993) Protein Eng. , vol.6 , pp. 947-952
    • Tokatlidis, K.1    Dhurjati, P.2    Beguin, P.3
  • 44
    • 0030026070 scopus 로고    scopus 로고
    • Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry
    • Wilm, M., A. Shevchenko, T. Houthaeve, S. Breit, L. Schweigerer, T. Fotsis, and M. Mann. 1996. Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry. Nature 379:466-469.
    • (1996) Nature , vol.379 , pp. 466-469
    • Wilm, M.1    Shevchenko, A.2    Houthaeve, T.3    Breit, S.4    Schweigerer, L.5    Fotsis, T.6    Mann, M.7
  • 45
    • 77957034698 scopus 로고
    • Methods for measuring cellulose activities
    • Wood, W. A., and K. M. Bhat. 1988. Methods for measuring cellulose activities. Methods Enzymol. 160:87-112.
    • (1988) Methods Enzymol. , vol.160 , pp. 87-112
    • Wood, W.A.1    Bhat, K.M.2
  • 46
    • 0002309012 scopus 로고    scopus 로고
    • Hemicellulases and biotechnology
    • S. G. Pandalai (ed.). Research Signpost, Trivandrum, Kerala, India
    • Ximenes, E., and F. Filho. 1998. Hemicellulases and biotechnology, p. 165-176. In S. G. Pandalai (ed.), Recent research developments in microbiology. Research Signpost, Trivandrum, Kerala, India.
    • (1998) Recent Research Developments in Microbiology , pp. 165-176
    • Ximenes, E.1    Filho, F.2
  • 47
    • 0030588690 scopus 로고    scopus 로고
    • Expression, purification and crystallization of a cohesin domain from the cellulosome of Clostridium thermocellum
    • Yaron, S., L. J. Shimon, F. Frolow, R. Lamed, E. Morag, Y. Shoham, and E. A. Bayer. 1996. Expression, purification and crystallization of a cohesin domain from the cellulosome of Clostridium thermocellum. J. Biotechnol. 51:243-249.
    • (1996) J. Biotechnol. , vol.51 , pp. 243-249
    • Yaron, S.1    Shimon, L.J.2    Frolow, F.3    Lamed, R.4    Morag, E.5    Shoham, Y.6    Bayer, E.A.7


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