Proteomic analysis of banana fruit reveals proteins that are differentially accumulated during ripening

Postharvest Biology and Technology

Volumn 70, Issue , 2012, Pages 51-58

  Toledo, Tatiana Torres ^a   Nogueira, Silvia Beserra ^a   Cordenunsi, Beatriz Rosana ^a   Gozzo, Fábio César ^b   Pilau, Eduardo Jorge ^b   Lajolo, Franco Maria ^a   Do Nascimento, João Roberto Oliveira ^a  

^a UNIVERSITY OF SÃO PAULO   (Brazil)

^b UNIVERSITY OF CAMPINAS   (Brazil)

Author keywords

Banana; Differential proteome; Fruit ripening; Musa spp.

Indexed keywords

MUSA;

EID: 84860540875     PISSN: 09255214     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.postharvbio.2012.04.005     Document Type: Article

References (49)

1. Arias P., Dankers C., Liu P., Pilkauskas P. The World Banana Economy 2003, Food and Agriculture Organization of the United Nations, Rome, 1985-2002. http://www.fao.org/kids/en/index.html (accessed 06.07.10).
2. Bianco L., Lopez L., Scalone A.G., Di Carli M., Desiderio A., Benvenuto E., Perrotta G. Strawberry proteome characterization and its regulation during fruit ripening and in different genotypes. Journal of Proteomics 2009, 72:586-607.
3. Brzezinski K., Bujacz G., Jaskolski M. Purification, crystallization and preliminary crystallographic studies of plant S-adenosyl-l-homocysteine hydrolase (Lupinus luteus). Acta Crystallographica 2008, 64:671-673.
4. Carpentier S.C., Witters E., Laukens K., Deckers P., Swennen R., Panis B. Preparation of protein extracts from recalcitrant plant tissues: an evaluation of different methods for two-dimensional gel electrophoresis analysis. Proteomics 2005, 5:2497-2507.
5. Carpentier S.C., Witters E., Laukens K., Onckelen H.V., Swennen R., Panis B. Banana (Musa spp.) as a model to study the meristem proteome: acclimation to osmotic stress. Proteomics 2007, 7:92-105.
6. Chen S., Harmon A.C. Advances in plant proteomics. Proteomics 2006, 6:5504-5516.
7. Chen Y., Hsu L., Huang I., Tsai T., Lee G., Shaw J. Gene cloning and characterization of a novel recombinant antifungal chitinase from papaya (Carica papaya). Journal of Agricultural and Food Chemistry 2007, 55:714-722.
8. Clendennen S.K., May C.D. Differential gene expression in ripening banana fruit. Plant Physiology 1997, 115:463-469.
9. Clendennen S.K., Lopez-Gomez R., Gomez-Lim M., Arntzen C.J., May G.D. The abundant 31-kilodalton banana pulp protein is homologous to class-III acidic chitinases. Phytochemistry 1997, 47:613-619.
10. Cordenunsi B.R., Lajolo F.M. Starch breakdown during banana ripening: sucrose synthase and sucrose phosphate synthase. Journal of Agricultural and Food Chemistry 1995, 43:347-351.
11. Da Mota R.V., Cordenunsi B.R., Nascimento J.R.O., Purgatto E., Rossetto M.R.M., Lajolo F.M. Activity and expression of banana starch-phosphorylases during fruit development and ripening. Planta 2002, 216:325-333.
12. Der Agopian R.G., Soares C.A., Purgatto E., Cordenunsi B.R., Lajolo F.M. Identification of fructooligosaccharides in different banana cultivars. Journal of Agricultural and Food Chemistry 2008, 56:3305-3310.
13. Deytieux C., Geny L., Lapaillerie D., Claverol S., Bonneu M., Donèche B. Proteome analysis of grape skins during ripening. Journal of Experimental Botany 2007, 58:1851-1862.
14. Dominguez-Puigjaner E., Vendrell M., Ludevid M.D. Differential protein accumulation in banana fruit during ripening. Plant Physiology 1992, 98:157-162.
15. Faurobert M., Mihr C., Bertin N., Pawlowski T., Negroni L., Sommerer N., Causse M. Major proteome variations associated with cherry tomato pericarp development and ripening. Plant Physiology 2007, 143:1327-1346.
16. Fernandez-Caballero C., Romero I., Gon O., Escribano M.I., Merodio C., Sanchez-Ballesta M.T. Characterization of an antifungal and cryoprotective class I chitinase from table grape berries (Vitis vinifera Cv. Cardinal). Journal of Agricultural and Food Chemistry 2009, 57:8893-8900.
17. Gibney E.R., Nolan C.M. Epigenetics and gene expression. Heredity 2010, 105:4-13.
18. Giovannoni J. Molecular biology of fruit maturation and ripening. Annual Review of Plant Physiology and Plant Molecular Biology 2001, 52:725-749.
19. Giribaldi M., Perugini I., Sauvage F., Schubert A. Analysis of protein changes during grape berry ripening by 2-DE and MALDI-TOF. Proteomics 2007, 7:3154-3170.
20. Godoy A., Cordenunsi B.R., Lajolo F.M., Nascimento J.R.O. Differential display and suppression subtractive hybridization analysis of the pulp of ripening banana. Scientia Horticulturae 2010, 124:51-56.
21. Gupta S.M., Srivastava S., Sane A.P., Nath P. Differential expression of genes during banana fruit development, ripening and 1-MCP treatment: presence of distinct fruit specific, ethylene induced and ethylene repressed expression. Postharvest Biology and Technology 2006, 42:16-22.
22. Guarino C., Arena S., De Simone L., D'Ambrosio C., Santoro S., Rocco M., Scaloni A., Marra M. Proteomic analysis of the major soluble components in Annurca apple flesh. Molecular Nutrition & Food Research 2007, 51:255-262.
23. Hill S.A., Rees T.ap. Fluxes of carbohydrate metabolism in ripening bananas. Planta 1994, 192:52-60.
24. Ho V.S.M., Ng T.B. Chitinase-like proteins with antifungal activity from emperor banana fruits. Protein and Peptide Letters 2007, 14:828-831.
25. Kasprzewska A. Plant chitinases - regulation and function. Cellular and Molecular Biology Letters 2003, 8:809-824.
26. Kesari R., Trivedi P.K., Nath P. Ethylene-induced ripening in banana evokes expression of defense and stress related genes in fruit tissue. Postharvest Biology and Technology 2007, 46:136-143.
27. Kim I.J., Kahng H.Y., Chung W.I. Characterization of cDNAs encoding small and large subunits of ADP-glucose pyrophosphorylases from watermelon (Citrullus vulgaris S.). Bioscience, Biotechnology and Biochemistry 1998, 62:550-555.
28. Li Y., Yang Y., Hsu J.S.F., Wu D., Wu H., Tzen J.T.C. Cloning and immunolocalization of an antifungal chitinase in jelly fig (Ficus awkeotsang) achenes. Phytochemistry 2005, 66:879-886.
29. Lücker J., Laszczak M., Smith D., Lund S.T. Generation of a predicted protein database from EST data and application to iTRAQ analyses in grape (Vitis Vinifera cv. Cabernet Sauvignon) berries at ripening initiation. BMC Genomics 2009, 10:50-67.
30. Mainardi J.A., Purgatto E., Vieira A., Bastos W.A., Cordenunsi B.R., Nascimento J.R.O., Lajolo F.M. Effects of ethylene and 1-methylcyclopropene (1-MCP) on gene expression and activity profile of r-1,4-glucan-phosphorylase during banana ripening. Journal of Agricultural and Food Chemistry 2006, 54:7294-7299.
31. Mann M., Jensen O.N. Proteomic analysis of post-translational modifications. Nature Biotechnology 2003, 21:255-261.
32. Manrique-Trujillo S.M., Ramírez-López A.C., Ibarra-Laclete E., Gómez-Lim M.A. Identification of genes differentially expressed during ripening of banana. Journal of Plant Physiology 2007, 164:1037-1050.
33. Martin C., Smith A.M. Starch biosynthesis. The Plant Cell 1995, 7:971-985.
34. Medina-Suárez R., Manning K., Fletcher J., Aked J., Bird C.R., Seymour C.B. Gene expression in the pulp of ripening bananas' two-dimensional sodium dodecyl sulfate-polyacrylamide gel electrophoresis of in vitro translation products and cDNA cloning of 25 different ripening-related mRNAs. Plant Physiology 1997, 115:453-461.
35. Muccilli V., Licciardello C., Fontanini D., Russo M.P., Cunsolo V., Saletti R., Recupero G.R., Foti S. Proteome analysis of Citrus sinensis L. (Osbeck) flesh at ripening time. Journal of Proteomics 2009, 73:134-152.
36. Negri A.S., Prinsi B., Rossoni M., Failla O., Scienza A., Cocucci M., Espen L. Proteome changes in the skin of the grape cultivar Barbera among different stages of ripening. BMC Genomics 2008, 9:378.
37. Neuhoff V., Stamm R., Eibl H. Clear background and highly sensitive protein staining with Coomassie Blue dyes in polyacrylamide gels: a systematic analysis. Electrophoresis 1985, 6:427-448.
38. Prasanna V., Prabha T.N., Tharanathan R.N. Fruit ripening phenomena - an overview. Critical Reviews in Food Science and Nutrition 2007, 47:1-19.
39. Payasi A., Sanwal G.G. Pectate lyase activity during ripening of banana fruit. Phytochemistry 2003, 63:243-248.
40. Peumans W.J., Proost P., Swennen R.L., Van Damme E.J.M. The abundant class III chitinase homolog in young developing banana fruits behaves as a transient vegetative storage protein and most probably serves as an important supply of amino acids for the synthesis of ripening-associated proteins. Plant Physiology 2002, 130:1063-1072.
41. Rocco M., D'ambrosio C., Arena S., Faurobert M., Scaloni A., Marra M. Proteomic analysis of tomato fruits from two ecotypes during ripening. Proteomics 2006, 6:3781-3791.
42. Samyn B., Sergeant K., Carpentier S., Debyser G., Panis B., Swennen R., Beeumen J.V. Functional proteome analysis of the banana plant (Musa spp.) using de Novo sequence analysis of derivatized peptides. Journal of Proteome Research 2006, 6:70-80.
43. Sarry J.-E., Sommerer N., Sauvage F.-X., Bergoin A., Rossignol M., Albagnac G., Romieu C. Grape berry biochemistry revisited upon proteomic analysis of the mesocarp. Proteomics 2004, 4:201-215.
44. Shiga T.M., Soares C.A., Nascimento J.R., Purgatto E., Lajolo F.M., Cordenunsi B.R. Ripening-associated changes in the amounts of starch and non-starch polysaccharides and their contributions to fruit softening in three banana cultivars. Journal of the Science of Food and Agriculture 2011, 91:1511-1516.
45. Sweetman C., Deluc L.G., Cramer G.R., Ford C.M., Soole K.L. Regulation of malate metabolism in grape berry and other developing fruits. Phytochemistry 2009, 70:1329-1344.
46. Tucker G.A. Introduction. Biochemistry of Fruit Ripening 1993, 1-43. Chapman & Hall, London. G.B. Seymour, J.E. Taylor, G.A. Tucker (Eds.).
47. White P.J. Recent advances in fruit development and ripening: an overview. Journal of Experimental Botany 2002, 53:1995-2000.
48. Yadav S., Yadav P.K., Yadav D., Yadav K.D.S. Pectin lyase: a review. Process Biochemistry 2009, 44:1-10.
49. Zhang J., Ma H., FenG.J., Zeng L., Wang Z., Chen S. Grape berry plasma membrane proteome analysis and its differential expression during ripening. Journal of Experimental Botany 2008, 59:2979-2990.