메뉴 건너뛰기




Volumn 7, Issue 4, 2012, Pages

High-throughput single-cell manipulation in brain tissue

Author keywords

[No Author keywords available]

Indexed keywords

DYE; ISOPROTEIN; REAGENT; BACTERIAL PROTEIN; ENHANCED GREEN FLUORESCENT PROTEIN; GREEN FLUORESCENT PROTEIN; GUANINE NUCLEOTIDE EXCHANGE FACTOR; HAPIP PROTEIN, RAT; PHOTOPROTEIN; RECOMBINANT PROTEIN; YELLOW FLUORESCENT PROTEIN, BACTERIA;

EID: 84859959650     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0035603     Document Type: Article
Times cited : (16)

References (62)
  • 1
    • 0037179790 scopus 로고    scopus 로고
    • Cortical Microcircuits
    • Nelson SB, (2002) Cortical Microcircuits. Neuron 36: 19-27.
    • (2002) Neuron , vol.36 , pp. 19-27
    • Nelson, S.B.1
  • 2
    • 33846707884 scopus 로고    scopus 로고
    • ZOOMING IN: a new high-resolution gene expression atlas of the brain
    • Jessberger S, Gage FH, (2007) ZOOMING IN: a new high-resolution gene expression atlas of the brain. Molecular systems biology 3: 75.
    • (2007) Molecular Systems Biology , vol.3 , pp. 75
    • Jessberger, S.1    Gage, F.H.2
  • 3
    • 74149083446 scopus 로고    scopus 로고
    • Clustering of spatial gene expression patterns in the mouse brain and comparison with classical neuroanatomy
    • Bohland JW, Bokil H, Pathak SD, Lee C-K, Ng L, et al. (2010) Clustering of spatial gene expression patterns in the mouse brain and comparison with classical neuroanatomy. Methods (San Diego, Calif.) 50: 105-12.
    • (2010) Methods (San Diego, Calif.) , vol.50 , pp. 105-112
    • Bohland, J.W.1    Bokil, H.2    Pathak, S.D.3    Lee, C.-K.4    Ng, L.5
  • 4
    • 77955944964 scopus 로고    scopus 로고
    • Targeting Single Neuronal Networks for Gene Expression and Cell Labeling In Vivo
    • Marshel JH, Mori T, Nielsen KJ, Callaway EM, (2010) Targeting Single Neuronal Networks for Gene Expression and Cell Labeling In Vivo. Neuron 67: 562-574.
    • (2010) Neuron , vol.67 , pp. 562-574
    • Marshel, J.H.1    Mori, T.2    Nielsen, K.J.3    Callaway, E.M.4
  • 5
    • 79953166354 scopus 로고    scopus 로고
    • Transfection via whole-cell recording in vivo: bridging single-cell physiology, genetics and connectomics
    • Rancz EA, Franks KM, Schwarz MK, Pichler B, Schaefer AT, et al. (2011) Transfection via whole-cell recording in vivo: bridging single-cell physiology, genetics and connectomics. Nature Neuroscience 14: 527-532.
    • (2011) Nature Neuroscience , vol.14 , pp. 527-532
    • Rancz, E.A.1    Franks, K.M.2    Schwarz, M.K.3    Pichler, B.4    Schaefer, A.T.5
  • 6
    • 79960844955 scopus 로고    scopus 로고
    • High-accuracy neurite reconstruction for high-throughput neuroanatomy
    • Helmstaedter M, Briggman KL, Denk W, (2011) High-accuracy neurite reconstruction for high-throughput neuroanatomy. Nature Neuroscience 14: 1081-1088.
    • (2011) Nature Neuroscience , vol.14 , pp. 1081-1088
    • Helmstaedter, M.1    Briggman, K.L.2    Denk, W.3
  • 8
    • 66849138570 scopus 로고    scopus 로고
    • Targeted single-cell electroporation of mammalian neurons in vivo
    • Judkewitz B, Rizzi M, Kitamura K, Häusser M, (2009) Targeted single-cell electroporation of mammalian neurons in vivo. Nature Protocols 4: 862-9.
    • (2009) Nature Protocols , vol.4 , pp. 862-869
    • Judkewitz, B.1    Rizzi, M.2    Kitamura, K.3    Häusser, M.4
  • 9
    • 37749005460 scopus 로고    scopus 로고
    • Targeted patch-clamp recordings and single-cell electroporation of unlabeled neurons in vivo
    • Kitamura K, Judkewitz B, Kano M, Denk W, Häusser M, (2008) Targeted patch-clamp recordings and single-cell electroporation of unlabeled neurons in vivo. Nature Methods 5: 61-7.
    • (2008) Nature Methods , vol.5 , pp. 61-67
    • Kitamura, K.1    Judkewitz, B.2    Kano, M.3    Denk, W.4    Häusser, M.5
  • 13
    • 0038267570 scopus 로고    scopus 로고
    • Development of rat CA1 neurones in acute versus organotypic slices: role of experience in synaptic morphology and activity
    • Simoni A De, Griesinger CB, Edwards FA, (2003) Development of rat CA1 neurones in acute versus organotypic slices: role of experience in synaptic morphology and activity. The Journal of Physiology 550: 135-47.
    • (2003) The Journal of Physiology , vol.550 , pp. 135-147
    • de Simoni, A.1    Griesinger, C.B.2    Edwards, F.A.3
  • 14
    • 75549092259 scopus 로고    scopus 로고
    • Amyloid beta from axons and dendrites reduces local spine number and plasticity
    • Wei W, Nguyen LN, Kessels HW, Hagiwara H, Sisodia S, et al. (2010) Amyloid beta from axons and dendrites reduces local spine number and plasticity. Nature Neuroscience 13: 190-6.
    • (2010) Nature Neuroscience , vol.13 , pp. 190-196
    • Wei, W.1    Nguyen, L.N.2    Kessels, H.W.3    Hagiwara, H.4    Sisodia, S.5
  • 15
    • 4544299313 scopus 로고    scopus 로고
    • Monitoring aggregate formation in organotypic slice cultures from transgenic mice
    • Smith DL, Bates GP, (2004) Monitoring aggregate formation in organotypic slice cultures from transgenic mice. Methods in Molecular Biology 277: 161-71.
    • (2004) Methods in Molecular Biology , vol.277 , pp. 161-171
    • Smith, D.L.1    Bates, G.P.2
  • 16
    • 70349745708 scopus 로고    scopus 로고
    • Delayed treatments for stroke influence neuronal death in rat organotypic slice cultures subjected to oxygen glucose deprivation
    • Hall AA, Leonardo CC, Collier LA, Rowe DD, Willing AE, et al. (2009) Delayed treatments for stroke influence neuronal death in rat organotypic slice cultures subjected to oxygen glucose deprivation. Neuroscience 164: 470-7.
    • (2009) Neuroscience , vol.164 , pp. 470-477
    • Hall, A.A.1    Leonardo, C.C.2    Collier, L.A.3    Rowe, D.D.4    Willing, A.E.5
  • 17
    • 76649145121 scopus 로고    scopus 로고
    • Regenerating cortical connections in a dish: the entorhino-hippocampal organotypic slice co-culture as tool for pharmacological screening of molecules promoting axon regeneration
    • Río JA del, Soriano E, (2010) Regenerating cortical connections in a dish: the entorhino-hippocampal organotypic slice co-culture as tool for pharmacological screening of molecules promoting axon regeneration. Nature Protocols 5: 217-26.
    • (2010) Nature Protocols , vol.5 , pp. 217-226
    • del Río, J.A.1    Soriano, E.2
  • 19
    • 12144279567 scopus 로고    scopus 로고
    • Activity dependence of cortical axon branch formation: a morphological and electrophysiological study using organotypic slice cultures
    • Uesaka N, Hirai S, Maruyama T, Ruthazer ES, Yamamoto N, (2005) Activity dependence of cortical axon branch formation: a morphological and electrophysiological study using organotypic slice cultures. The Journal of Neuroscience 25: 1-9.
    • (2005) The Journal of Neuroscience , vol.25 , pp. 1-9
    • Uesaka, N.1    Hirai, S.2    Maruyama, T.3    Ruthazer, E.S.4    Yamamoto, N.5
  • 22
    • 33947653114 scopus 로고    scopus 로고
    • Brain slices as models for neurodegenerative disease and screening platforms to identify novel therapeutics
    • Cho S, Wood A, Bowlby MR, (2007) Brain slices as models for neurodegenerative disease and screening platforms to identify novel therapeutics. Current neuropharmacology 5: 19-33.
    • (2007) Current Neuropharmacology , vol.5 , pp. 19-33
    • Cho, S.1    Wood, A.2    Bowlby, M.R.3
  • 23
    • 34347236568 scopus 로고    scopus 로고
    • Long-term live imaging of neuronal circuits in organotypic hippocampal slice cultures
    • Gogolla N, Galimberti I, DePaola V, Caroni P, (2006) Long-term live imaging of neuronal circuits in organotypic hippocampal slice cultures. Nature Protocols 1: 1223-6.
    • (2006) Nature Protocols , vol.1 , pp. 1223-1226
    • Gogolla, N.1    Galimberti, I.2    DePaola, V.3    Caroni, P.4
  • 24
    • 34347253602 scopus 로고    scopus 로고
    • Preparation of organotypic hippocampal slice cultures for long-term live imaging
    • Gogolla N, Galimberti I, DePaola V, Caroni P, (2006) Preparation of organotypic hippocampal slice cultures for long-term live imaging. Nature Protocols 1: 1165-71.
    • (2006) Nature Protocols , vol.1 , pp. 1165-1171
    • Gogolla, N.1    Galimberti, I.2    DePaola, V.3    Caroni, P.4
  • 25
    • 37549028828 scopus 로고    scopus 로고
    • Circuit reconstruction tools today
    • Smith SJ, (2007) Circuit reconstruction tools today. Current opinion in neurobiology 17: 601-8.
    • (2007) Current Opinion in Neurobiology , vol.17 , pp. 601-608
    • Smith, S.J.1
  • 26
    • 12744279852 scopus 로고    scopus 로고
    • Targeting specific neuronal populations using adeno- and lentiviral vectors: applications for imaging and studies of cell function
    • Teschemacher AG, Wang S, Lonergan T, Duale H, Waki H, et al. (2005) Targeting specific neuronal populations using adeno- and lentiviral vectors: applications for imaging and studies of cell function. Experimental Physiology 90: 61-9.
    • (2005) Experimental Physiology , vol.90 , pp. 61-69
    • Teschemacher, A.G.1    Wang, S.2    Lonergan, T.3    Duale, H.4    Waki, H.5
  • 27
    • 0034988923 scopus 로고    scopus 로고
    • Gene transfer methods for CNS organotypic cultures: a comparison of three nonviral methods
    • Murphy RC, Messer A, (2001) Gene transfer methods for CNS organotypic cultures: a comparison of three nonviral methods. Molecular Therapy 3: 113-21.
    • (2001) Molecular Therapy , vol.3 , pp. 113-121
    • Murphy, R.C.1    Messer, A.2
  • 28
    • 12344276497 scopus 로고    scopus 로고
    • Organotypic brain slice cultures: an efficient and reliable method for neurotoxicological screening and mechanistic studies
    • Noraberg J, (2004) Organotypic brain slice cultures: an efficient and reliable method for neurotoxicological screening and mechanistic studies. Alternatives to Laboratory Animals: ATLA 32: 329-37.
    • (2004) Alternatives to Laboratory Animals: ATLA , vol.32 , pp. 329-337
    • Noraberg, J.1
  • 29
    • 35948992641 scopus 로고    scopus 로고
    • Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system
    • Livet J, Weissman TA, Kang H, Draft RW, Lu J, et al. (2007) Transgenic strategies for combinatorial expression of fluorescent proteins in the nervous system. Nature 450: 56-62.
    • (2007) Nature , vol.450 , pp. 56-62
    • Livet, J.1    Weissman, T.A.2    Kang, H.3    Draft, R.W.4    Lu, J.5
  • 30
    • 34548770656 scopus 로고    scopus 로고
    • Biolistic transfection of neuronal cultures using a hand-held gene gun
    • O'Brien JA, Lummis SCR, (2006) Biolistic transfection of neuronal cultures using a hand-held gene gun. Nature Protocols 1: 977-81.
    • (2006) Nature Protocols , vol.1 , pp. 977-981
    • O'Brien, J.A.1    Lummis, S.C.R.2
  • 31
    • 84859971281 scopus 로고    scopus 로고
    • Characterization of Oligophrenin-1, a RhoGAP Lost in Patients Affected with Mental Retardation: Lentiviral Injection in Organotypic Brain Slice Cultures
    • Elsevier
    • Kasri NN, Govek E-E, Aelst LV, (2008) Characterization of Oligophrenin-1, a RhoGAP Lost in Patients Affected with Mental Retardation: Lentiviral Injection in Organotypic Brain Slice Cultures. Elsevier.
    • (2008)
    • Kasri, N.N.1    Govek, E.-E.2    Aelst, L.V.3
  • 33
    • 0038208235 scopus 로고    scopus 로고
    • High-efficiency transfection of individual neurons using modified electrophysiology techniques
    • Rathenberg J, Nevian T, Witzemann V, (2003) High-efficiency transfection of individual neurons using modified electrophysiology techniques. Journal of Neuroscience Methods 126: 91-8.
    • (2003) Journal of Neuroscience Methods , vol.126 , pp. 91-98
    • Rathenberg, J.1    Nevian, T.2    Witzemann, V.3
  • 36
    • 34347236948 scopus 로고    scopus 로고
    • Preparation of organotypic hippocampal slice cultures: interface method
    • Simoni A De, Yu LMY, (2006) Preparation of organotypic hippocampal slice cultures: interface method. Nature Protocols 1: 1439-45.
    • (2006) Nature Protocols , vol.1 , pp. 1439-1445
    • de Simoni, A.1    Yu, L.M.Y.2
  • 37
    • 0036596186 scopus 로고    scopus 로고
    • Targeted electroporation in Xenopus tadpoles in vivo-from single cells to the entire brain
    • Haas K, Jensen K, Sin WC, Foa L, Cline HT, (2002) Targeted electroporation in Xenopus tadpoles in vivo-from single cells to the entire brain. Differentiation 70: 148-54.
    • (2002) Differentiation , vol.70 , pp. 148-154
    • Haas, K.1    Jensen, K.2    Sin, W.C.3    Foa, L.4    Cline, H.T.5
  • 38
    • 33644507731 scopus 로고    scopus 로고
    • Electroporation of neurons and growth cones in Aplysia californica
    • Lovell P, Jezzini SH, Moroz LL, (2006) Electroporation of neurons and growth cones in Aplysia californica. Journal of Neuroscience Methods 151: 114-120.
    • (2006) Journal of Neuroscience Methods , vol.151 , pp. 114-120
    • Lovell, P.1    Jezzini, S.H.2    Moroz, L.L.3
  • 39
    • 41949093734 scopus 로고    scopus 로고
    • Single-cell electroporation of adult sensory neurons for gene screening with RNA interference mechanism
    • Boudes M, Pieraut S, Valmier J, Carroll P, Scamps F, (2008) Single-cell electroporation of adult sensory neurons for gene screening with RNA interference mechanism. Journal of Neuroscience Methods 170: 204-11.
    • (2008) Journal of Neuroscience Methods , vol.170 , pp. 204-211
    • Boudes, M.1    Pieraut, S.2    Valmier, J.3    Carroll, P.4    Scamps, F.5
  • 40
    • 0035046041 scopus 로고    scopus 로고
    • Single-Cell Electroporationfor Gene Transfer In Vivo
    • Haas K, (2001) Single-Cell Electroporationfor Gene Transfer In Vivo. Neuron 29: 583-591.
    • (2001) Neuron , vol.29 , pp. 583-591
    • Haas, K.1
  • 41
    • 0034705364 scopus 로고    scopus 로고
    • Isoforms of kalirin, a neuronal Dbl family member, generated through use of different 5′- and 3′-ends along with an internal translational initiation site
    • Johnson RC, Penzes P, Eipper BA, Mains RE, (2000) Isoforms of kalirin, a neuronal Dbl family member, generated through use of different 5′- and 3′-ends along with an internal translational initiation site. The Journal of Biological Chemistry 275: 19324-33.
    • (2000) The Journal of Biological Chemistry , vol.275 , pp. 19324-19333
    • Johnson, R.C.1    Penzes, P.2    Eipper, B.A.3    Mains, R.E.4
  • 42
    • 0037461752 scopus 로고    scopus 로고
    • Rapid Induction of Dendritic Spine Morphogenesis by trans-Synaptic EphrinB-EphB Receptor Activation of the Rho-GEF Kalirin
    • Penzes P, Beeser A, Chernoff J, Schiller MR, Eipper BA, et al. (2003) Rapid Induction of Dendritic Spine Morphogenesis by trans-Synaptic EphrinB-EphB Receptor Activation of the Rho-GEF Kalirin. Neuron 37: 263-274.
    • (2003) Neuron , vol.37 , pp. 263-274
    • Penzes, P.1    Beeser, A.2    Chernoff, J.3    Schiller, M.R.4    Eipper, B.A.5
  • 44
    • 36049008808 scopus 로고    scopus 로고
    • Kalirin-7 controls activity-dependent structural and functional plasticity of dendritic spines
    • Xie Z, Srivastava DP, Photowala H, Kai L, Cahill ME, et al. (2007) Kalirin-7 controls activity-dependent structural and functional plasticity of dendritic spines. Neuron 56: 640-56.
    • (2007) Neuron , vol.56 , pp. 640-656
    • Xie, Z.1    Srivastava, D.P.2    Photowala, H.3    Kai, L.4    Cahill, M.E.5
  • 45
    • 47649093892 scopus 로고    scopus 로고
    • Dendritic spine dynamics-a key role for kalirin-7
    • Penzes P, Jones KA, (2008) Dendritic spine dynamics-a key role for kalirin-7. Trends in Neurosciences 31: 419-27.
    • (2008) Trends in Neurosciences , vol.31 , pp. 419-427
    • Penzes, P.1    Jones, K.A.2
  • 46
    • 38549181783 scopus 로고    scopus 로고
    • Kalirin-7 is an essential component of both shaft and spine excitatory synapses in hippocampal interneurons
    • Ma X-M, Wang Y, Ferraro F, Mains RE, Eipper BA, (2008) Kalirin-7 is an essential component of both shaft and spine excitatory synapses in hippocampal interneurons. The Journal of Neuroscience 28: 711-24.
    • (2008) The Journal of Neuroscience , vol.28 , pp. 711-724
    • Ma, X.-M.1    Wang, Y.2    Ferraro, F.3    Mains, R.E.4    Eipper, B.A.5
  • 48
    • 0345305679 scopus 로고    scopus 로고
    • Kalirin, a multifunctional Rho guanine nucleotide exchange factor, is necessary for maintenance of hippocampal pyramidal neuron dendrites and dendritic spines
    • Ma X-M, Huang J, Wang Y, Eipper BA, Mains RE, (2003) Kalirin, a multifunctional Rho guanine nucleotide exchange factor, is necessary for maintenance of hippocampal pyramidal neuron dendrites and dendritic spines. The Journal of Neuroscience 23: 10593-603.
    • (2003) The Journal of Neuroscience , vol.23 , pp. 10593-10603
    • Ma, X.-M.1    Huang, J.2    Wang, Y.3    Eipper, B.A.4    Mains, R.E.5
  • 49
    • 65649106873 scopus 로고    scopus 로고
    • Kalirin-7: linking spine plasticity and behavior
    • Sommer JE, Budreck EC, (2009) Kalirin-7: linking spine plasticity and behavior. The Journal of Neuroscience 29: 5367-9.
    • (2009) The Journal of Neuroscience , vol.29 , pp. 5367-5369
    • Sommer, J.E.1    Budreck, E.C.2
  • 50
    • 0035139220 scopus 로고    scopus 로고
    • The neuronal Rho-GEF Kalirin-7 interacts with PDZ domain-containing proteins and regulates dendritic morphogenesis
    • Penzes P, Johnson RC, Sattler R, Zhang X, Huganir RL, et al. (2001) The neuronal Rho-GEF Kalirin-7 interacts with PDZ domain-containing proteins and regulates dendritic morphogenesis. Neuron 29: 229-42.
    • (2001) Neuron , vol.29 , pp. 229-242
    • Penzes, P.1    Johnson, R.C.2    Sattler, R.3    Zhang, X.4    Huganir, R.L.5
  • 51
    • 59249102884 scopus 로고    scopus 로고
    • Transfer of small interfering RNA by single-cell electroporation in cerebellar cell cultures
    • Tanaka M, Yanagawa Y, Hirashima N, (2009) Transfer of small interfering RNA by single-cell electroporation in cerebellar cell cultures. Journal of Neuroscience Methods 178: 80-6.
    • (2009) Journal of Neuroscience Methods , vol.178 , pp. 80-86
    • Tanaka, M.1    Yanagawa, Y.2    Hirashima, N.3
  • 54
    • 77955051818 scopus 로고    scopus 로고
    • A simple method of in vitro electroporation allows visualization, recording, and calcium imaging of local neuronal circuits
    • Hovis KR, Padmanabhan K, Urban NN, (2010) A simple method of in vitro electroporation allows visualization, recording, and calcium imaging of local neuronal circuits. Journal of neuroscience methods 191: 1-10.
    • (2010) Journal of Neuroscience Methods , vol.191 , pp. 1-10
    • Hovis, K.R.1    Padmanabhan, K.2    Urban, N.N.3
  • 59
    • 0034009079 scopus 로고    scopus 로고
    • An isoform of kalirin, a brain-specific GDP/GTP exchange factor, is enriched in the postsynaptic density fraction
    • Penzes P, Johnson RC, Alam MR, Kambampati V, Mains RE, et al. (2000) An isoform of kalirin, a brain-specific GDP/GTP exchange factor, is enriched in the postsynaptic density fraction. The Journal of Biological Chemistry 275: 6395-403.
    • (2000) The Journal of Biological Chemistry , vol.275 , pp. 6395-6403
    • Penzes, P.1    Johnson, R.C.2    Alam, M.R.3    Kambampati, V.4    Mains, R.E.5
  • 60
    • 0003686201 scopus 로고
    • Advanced micropipette techniques for cell physiology
    • Wiley
    • Brown K, Flaming D, (1986) Advanced micropipette techniques for cell physiology. Wiley.
    • (1986)
    • Brown, K.1    Flaming, D.2
  • 61
    • 1942423636 scopus 로고    scopus 로고
    • A Transient Diffusion Model Yields Unitary Gap Junctional Permeabilities from Images of Cell-to-Cell Fluorescent Dye Transfer Between Xenopus Oocytes
    • Nitsche JM, Chang H-C, Weber PA, Nicholson BJ, (2004) A Transient Diffusion Model Yields Unitary Gap Junctional Permeabilities from Images of Cell-to-Cell Fluorescent Dye Transfer Between Xenopus Oocytes. Biophysical Journal 86: 2058-2077.
    • (2004) Biophysical Journal , vol.86 , pp. 2058-2077
    • Nitsche, J.M.1    Chang, H.-C.2    Weber, P.A.3    Nicholson, B.J.4
  • 62
    • 39549086017 scopus 로고    scopus 로고
    • Prediction of diffusion coefficients of plasmids
    • Prazeres DMF, (2008) Prediction of diffusion coefficients of plasmids. Biotechnology and Bioengineering 99: 1040-4.
    • (2008) Biotechnology and Bioengineering , vol.99 , pp. 1040-1044
    • Prazeres, D.M.F.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.