-
1
-
-
0345923834
-
The Art of War: Innate and adaptive immune responses
-
DOI 10.1007/s00018-003-3180-y
-
PW Dempsey, SA Vaidya and G Cheng: The art of war: Innate and adaptive immune responses. Cell Mol Life Sci, 60(12), 2604-21 (2003). (Pubitemid 38041363)
-
(2003)
Cellular and Molecular Life Sciences
, vol.60
, Issue.12
, pp. 2604-2621
-
-
Dempsey, P.W.1
Vaidya, S.A.2
Cheng, G.3
-
3
-
-
0030293667
-
Immunity and the invertebrates
-
G Beck and GS Habicht: Immunity and the invertebrates. Sci Am, 275(5), 60-3, 66 (1996).
-
(1996)
Sci Am
, vol.275
, Issue.5
, pp. 60-66
-
-
Beck, G.1
Habicht, G.S.2
-
4
-
-
0032546352
-
Dendritic cells and the control of immunity
-
DOI 10.1038/32588
-
J Banchereau and RM Steinman: Dendritic cells and the control of immunity. Nature, 392(6673), 245-52 (1998). (Pubitemid 28155090)
-
(1998)
Nature
, vol.392
, Issue.6673
, pp. 245-252
-
-
Banchereau, J.1
Steinman, R.M.2
-
6
-
-
78650292219
-
Towards a comprehensive human cell-surface immunome database
-
MC Diaz-Ramos, P Engel and R Bastos: Towards a comprehensive human cell-surface immunome database. Immunol Lett, 134(2), 183-7 (2011).
-
(2011)
Immunol Lett
, vol.134
, Issue.2
, pp. 183-187
-
-
Diaz-Ramos, M.C.1
Engel, P.2
Bastos, R.3
-
7
-
-
70349744048
-
Bioinformatics construction of the human cell surfaceome
-
JP da Cunha, PA Galante, JE de Souza, RF de Souza, PM Carvalho, DT Ohara, RP Moura, SM Oba-Shinja, SK Marie, WA Silva, Jr., RO Perez, B Stransky, M Pieprzyk, J Moore, O Caballero, J Gama-Rodrigues, A Habr-Gama, WP Kuo, AJ Simpson, AA Camargo, LJ Old and SJ de Souza: Bioinformatics construction of the human cell surfaceome. Proc Natl Acad Sci USA, 106(39), 16752-7 (2009).
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, Issue.39
, pp. 16752-16757
-
-
Da Cunha, J.P.1
Galante, P.A.2
De Souza, J.E.3
De Souza, R.F.4
Carvalho, P.M.5
Ohara, D.T.6
Moura, R.P.7
Oba-Shinja, S.M.8
Marie, S.K.9
Silva Jr., W.A.10
Perez, R.O.11
Stransky, B.12
Pieprzyk, M.13
Moore, J.14
Caballero, O.15
Gama-Rodrigues, J.16
Habr-Gama, A.17
Kuo, W.P.18
Simpson, A.J.19
Camargo, A.A.20
Old, L.J.21
De Souza, S.J.22
more..
-
8
-
-
77954943215
-
Epithelial decision makers: In search of the epimmunome
-
M Swamy, C Jamora, W Havran and A Hayday: Epithelial decision makers: in search of the 'epimmunome'. Nat Immunol, 11(8), 656-65 (2010).
-
(2010)
Nat Immunol
, vol.11
, Issue.8
, pp. 656-665
-
-
Swamy, M.1
Jamora, C.2
Havran, W.3
Hayday, A.4
-
10
-
-
2942541735
-
Cross-presentation, dendritic cell subsets, and the generation of immunity to cellular antigens
-
DOI 10.1111/j.0105-2896.2004.00142.x
-
WR Heath, GT Belz, GM Behrens, CM Smith, SP Forehan, IA Parish, GM Davey, NS Wilson, FR Carbone and JA Villadangos: Cross-presentation, dendritic cell subsets, and the generation of immunity to cellular antigens. Immunol Rev, 199, 9-26 (2004). (Pubitemid 38736761)
-
(2004)
Immunological Reviews
, vol.199
, pp. 9-26
-
-
Heath, W.R.1
Belz, G.T.2
Behrens, G.M.N.3
Smith, C.M.4
Forehan, S.P.5
Parish, I.A.6
Davey, G.M.7
Wilson, N.S.8
Carbone, F.R.9
Villadangos, J.A.10
-
11
-
-
0028860240
-
Signal transduction by cell adhesion receptors in leukocytes
-
C Rosales and RL Juliano: Signal transduction by cell adhesion receptors in leukocytes. J Leukocyte Biol, 57(2), 189- 98 (1995).
-
(1995)
J Leukocyte Biol
, vol.57
, Issue.2
, pp. 189-198
-
-
Rosales, C.1
Juliano, R.L.2
-
12
-
-
27744531173
-
Chemokines: Key players in innate and adaptive immunity
-
C Esche, C Stellato and LA Beck: Chemokines: key players in innate and adaptive immunity. J Invest Dermatol, 125(4), 615-28 (2005).
-
(2005)
J Invest Dermatol
, vol.125
, Issue.4
, pp. 615-628
-
-
Esche, C.1
Stellato, C.2
Beck, L.A.3
-
13
-
-
0031745571
-
Signal transduction and signal modulation by cell adhesion receptors: The role of integrins, cadherins, immunoglobulin-cell adhesion molecules, and selectins
-
AE Aplin, A Howe, SK Alahari and RL Juliano: Signal transduction and signal modulation by cell adhesion receptors: the role of integrins, cadherins, immunoglobulin-cell adhesion molecules, and selectins. Pharmacol Rev, 50(2), 197-263 (1998). (Pubitemid 28304026)
-
(1998)
Pharmacological Reviews
, vol.50
, Issue.2
, pp. 197-263
-
-
Aplin, A.E.1
Howe, A.2
Alahari, S.K.3
Juliano, R.L.4
-
14
-
-
77949732088
-
Prediction of the human membrane proteome
-
L Fagerberg, K Jonasson, G von Heijne, M Uhlen and L Berglund: Prediction of the human membrane proteome. Proteomics, 10(6), 1141-9 (2010).
-
(2010)
Proteomics
, vol.10
, Issue.6
, pp. 1141-1149
-
-
Fagerberg, L.1
Jonasson, K.2
Heijne, G.V.3
Uhlen, M.4
Berglund, L.5
-
15
-
-
66449084442
-
Infrastructure for the life sciences: Design and implementation of the UniProt website
-
E Jain, A Bairoch, S Duvaud, I Phan, N Redaschi, BE Suzek, MJ Martin, P McGarvey and E Gasteiger: Infrastructure for the life sciences: design and implementation of the UniProt website. BMC Bioinformatics, 10, 136 (2009).
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 136
-
-
Jain, E.1
Bairoch, A.2
Duvaud, S.3
Phan, I.4
Redaschi, N.5
Suzek, B.E.6
Martin, M.J.7
McGarvey, P.8
Gasteiger, E.9
-
16
-
-
77955237447
-
-
The Universal Protein Resource (UniProt) in 2010, (Database issue)
-
The Universal Protein Resource (UniProt) in 2010. Nucleic Acids Res, 38(Database issue), D142-8 (2010).
-
(2010)
Nucleic Acids Res
, vol.38
-
-
-
17
-
-
78650642557
-
Defining the transcriptome and proteome in three functionally different human cell lines
-
E Lundberg, L Fagerberg, D Klevebring, I Matic, T Geiger, J Cox, C Algenas, J Lundeberg, M Mann and M Uhlen: Defining the transcriptome and proteome in three functionally different human cell lines. Mol Syst Biol, 6, 450 (2010).
-
(2010)
Mol Syst Biol
, vol.6
, pp. 450
-
-
Lundberg, E.1
Fagerberg, L.2
Klevebring, D.3
Matic, I.4
Geiger, T.5
Cox, J.6
Algenas, C.7
Lundeberg, J.8
Mann, M.9
Uhlen, M.10
-
18
-
-
0035805255
-
Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
-
DOI 10.1126/science.292.5518.929
-
T Ideker, V Thorsson, JA Ranish, R Christmas, J Buhler, JK Eng, R Bumgarner, DR Goodlett, R Aebersold and L Hood: Integrated genomic and proteomic analyses of a systematically perturbed metabolic network. Science, 292(5518), 929-34 (2001). (Pubitemid 32422490)
-
(2001)
Science
, vol.292
, Issue.5518
, pp. 929-934
-
-
Ideker, T.1
Thorsson, V.2
Ranish, J.A.3
Christmas, R.4
Buhler, J.5
Eng, J.K.6
Bumgarner, R.7
Goodlett, D.R.8
Aebersold, R.9
Hood, L.10
-
19
-
-
55249096894
-
Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast
-
LM de Godoy, JV Olsen, J Cox, ML Nielsen, NC Hubner, F Frohlich, TC Walther and M Mann: Comprehensive mass-spectrometry-based proteome quantification of haploid versus diploid yeast. Nature, 455(7217), 1251-4 (2008).
-
(2008)
Nature
, vol.455
, Issue.7217
, pp. 1251-1254
-
-
De Godoy, L.M.1
Olsen, J.V.2
Cox, J.3
Nielsen, M.L.4
Hubner, N.C.5
Frohlich, F.6
Walther, T.C.7
Mann, M.8
-
20
-
-
33846247479
-
CD molecules 2006 - Human cell differentiation molecules
-
DOI 10.1016/j.jim.2006.11.001, PII S002217590600336X
-
H Zola, B Swart, A Banham, S Barry, A Beare, A Bensussan, L Boumsell, CD Buckley, HJ Bühring, G Clark, P Engel, D Fox, BQ Jin, PJ Macardle, F Malavasi, D Mason, H Stockinger and X Yang: CD molecules 2006- human cell differentiation molecules. J Immunol Methods, 319(1-2), 1-5 (2007). (Pubitemid 46107469)
-
(2007)
Journal of Immunological Methods
, vol.319
, Issue.1-2
, pp. 1-5
-
-
Zola, H.1
Swart, B.2
Banham, A.3
Barry, S.4
Beare, A.5
Bensussan, A.6
Boumsell, L.7
D. Buckley, C.8
Buhring, H.-J.9
Clark, G.10
Engel, P.11
Fox, D.12
Jin, B.-Q.13
Macardle, P.J.14
Malavasi, F.15
Mason, D.16
Stockinger, H.17
Yang, X.18
-
21
-
-
0032784783
-
World Health organization classification of neoplastic diseases of the hematopoietic and lymphoid tissues: Report of the Clinical Advisory Committee meeting-Airlie House, Virginia, November 1997
-
NL Harris, ES Jaffe, J Diebold, G Flandrin, HK Muller- Hermelink, J Vardiman, TA Lister and CD Bloomfield: World Health Organization classification of neoplastic diseases of the hematopoietic and lymphoid tissues: report of the Clinical Advisory Committee meeting-Airlie House, Virginia, November 1997. J Clin Oncol, 17(12), 3835-49 (1999).
-
(1999)
J Clin Oncol
, vol.17
, Issue.12
, pp. 3835-3849
-
-
Harris, N.L.1
Jaffe, E.S.2
Diebold, J.3
Flandrin, G.4
Muller-Hermelink, H.K.5
Vardiman, J.6
Lister, T.A.7
Bloomfield, C.D.8
-
22
-
-
0024318576
-
Proposals for the classification of chronic (mature) B and T lymphoid leukaemias
-
JM Bennett, D Catovsky, MT Daniel, G Flandrin, DA Galton, HR Gralnick and C Sultan: Proposals for the classification of chronic (mature) B and T lymphoid leukaemias. French-American-British (FAB) Cooperative Group. J Clin Pathol, 42(6), 567-84 (1989). (Pubitemid 19156426)
-
(1989)
Journal of Clinical Pathology
, vol.42
, Issue.6
, pp. 567-584
-
-
Bennett, J.M.1
Catovsky, D.2
Daniel, M.-T.3
Flandrin, G.4
Galton, D.A.G.5
Gralnick, H.R.6
Sultan, C.7
-
23
-
-
0022135739
-
Proposed revised criteria for the classification of acute myeloid leukemia
-
JM Bennett, D Catovsky, MT Daniel, G Flandrin, DA Galton, HR Gralnick and C Sultan: Proposed revised criteria for the classification of acute myeloid leukemia. A report of the French-American-British Cooperative Group. Ann Inter Med, 103(4), 620-5 (1985).
-
(1985)
A Report of the French-American-British Cooperative Group, Ann Inter Med
, vol.103
, Issue.4
, pp. 620-625
-
-
Bennett, J.M.1
Catovsky, D.2
Daniel, M.T.3
Flandrin, G.4
Galton, D.A.5
Gralnick, H.R.6
Sultan, C.7
-
24
-
-
57049086900
-
Epitope mapping of antibodies using bacterial surface display
-
J Rockberg, J Lofblom, B Hjelm, M Uhlen and S Stahl: Epitope mapping of antibodies using bacterial surface display. Nat Methods, 5(12), 1039-45 (2008).
-
(2008)
Nat Methods
, vol.5
, Issue.12
, pp. 1039-1045
-
-
Rockberg, J.1
Lofblom, J.2
Hjelm, B.3
Uhlen, M.4
Stahl, S.5
-
25
-
-
28544438391
-
AntiJen: A quantitative immunology database integrating functional, thermodynamic, kinetic, biophysical, and cellular data
-
CP Toseland, DJ Clayton, H McSparron, SL Hemsley, MJ Blythe, K Paine, IA Doytchinova, P Guan, CK Hattotuwagama and DR Flower: AntiJen: a quantitative immunology database integrating functional, thermodynamic, kinetic, biophysical, and cellular data. Immunome Res, 1(1), 4 (2005).
-
(2005)
Immunome Res
, vol.1
, Issue.1
, pp. 4
-
-
Toseland, C.P.1
Clayton, D.J.2
McSparron, H.3
Hemsley, S.L.4
Blythe, M.J.5
Paine, K.6
Doytchinova, I.A.7
Guan, P.8
Hattotuwagama, C.K.9
Flower, D.R.10
-
27
-
-
29244477844
-
A human protein atlas for normal and cancer tissues based on antibody proteomics
-
DOI 10.1074/mcp.M500279-MCP200
-
M Uhlen, E Bjorling, C Agaton, CA Szigyarto, B Amini, E Andersen, AC Andersson, P Angelidou, A Asplund, C Asplund, L Berglund, K Bergstrom, H Brumer, D Cerjan, M Ekstrom, A Elobeid, C Eriksson, L Fagerberg, R Falk, J Fall, M Forsberg, MG Bjorklund, K Gumbel, A Halimi, I Hallin, C Hamsten, M Hansson, M Hedhammar, G Hercules, C Kampf, K Larsson, M Lindskog, W Lodewyckx, J Lund, J Lundeberg, K Magnusson, E Malm, P Nilsson, J Odling, P Oksvold, I Olsson, E Oster, J Ottosson, L Paavilainen, A Persson, R Rimini, J Rockberg, M Runeson, A Sivertsson, A Skollermo, J Steen, M Stenvall, F Sterky, S Stromberg, M Sundberg, H Tegel, S Tourle, E Wahlund, A Walden, J Wan, H Wernerus, J Westberg, K Wester, U Wrethagen, LL Xu, S Hober and F Ponten: A human protein atlas for normal and cancer tissues based on antibody proteomics. Mol Cell Proteomics, 4(12), 1920-32 (2005). (Pubitemid 41830186)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.12
, pp. 1920-1932
-
-
Uhlen, M.1
Bjorling, E.2
Agaton, C.3
Szigyarto, C.A.-K.4
Amini, B.5
Andersen, E.6
Andersson, A.-C.7
Angelidou, P.8
Asplund, A.9
Asplund, C.10
Berglund, L.11
Bergstrom, K.12
Brumer, H.13
Cerjan, D.14
Ekstrom, M.15
Elobeid, A.16
Eriksson, C.17
Fagerberg, L.18
Falk, R.19
Fall, J.20
Forsberg, M.21
Bjorklund, M.G.22
Gumbel, K.23
Halimi, A.24
Hallin, I.25
Hamsten, C.26
Hansson, M.27
Hedhammar, M.28
Hercules, G.29
Kampf, C.30
Larsson, K.31
Lindskog, M.32
Lodewyckx, W.33
Lund, J.34
Lundeberg, J.35
Magnusson, K.36
Malm, E.37
Nilsson, P.38
Odling, J.39
Oksvold, P.40
Olsson, I.41
Oster, E.42
Ottosson, J.43
Paavilainen, L.44
Persson, A.45
Rimini, R.46
Rockberg, J.47
Runeson, M.48
Sivertsson, A.49
Skollermo, A.50
Steen, J.51
Stenvall, M.52
Sterky, F.53
Stromberg, S.54
Sundberg, M.55
Tegel, H.56
Tourle, S.57
Wahlund, E.58
Walden, A.59
Wan, J.60
Wernerus, H.61
Westberg, J.62
Wester, K.63
Wrethagen, U.64
Xu, L.L.65
Hober, S.66
Ponten, F.67
more..
-
28
-
-
55049112492
-
A genecentric Human Protein Atlas for expression profiles based on antibodies
-
L Berglund, E Bjorling, P Oksvold, L Fagerberg, A Asplund, CA Szigyarto, A Persson, J Ottosson, H Wernerus, P Nilsson, E Lundberg, A Sivertsson, S Navani, K Wester, C Kampf, S Hober, F Ponten and M Uhlen: A genecentric Human Protein Atlas for expression profiles based on antibodies. Mol Cell Proteomics, 7(10), 2019-27 (2008).
-
(2008)
Mol Cell Proteomics
, vol.7
, Issue.10
, pp. 2019-2027
-
-
Berglund, L.1
Bjorling, E.2
Oksvold, P.3
Fagerberg, L.4
Asplund, A.5
Szigyarto, C.A.6
Persson, A.7
Ottosson, J.8
Wernerus, H.9
Nilsson, P.10
Lundberg, E.11
Sivertsson, A.12
Navani, S.13
Wester, K.14
Kampf, C.15
Hober, S.16
Ponten, F.17
Uhlen, M.18
-
29
-
-
0033867592
-
With the benefit of hindsight
-
DOI 10.1016/S0167-5699(00)01660-1, PII S0167569900016601
-
C Milstein: With the benefit of hindsight. Immunol Today, 21(8), 359-64 (2000). (Pubitemid 30612295)
-
(2000)
Immunology Today
, vol.21
, Issue.8
, pp. 359-364
-
-
Milstein, C.1
-
30
-
-
0016756272
-
Continuous cultures of fused cells secreting antibody of predefined specificity
-
G Kohler and C Milstein: Continuous cultures of fused cells secreting antibody of predefined specificity. Nature, 256(5517), 495-7 (1975).
-
(1975)
Nature
, vol.256
, Issue.5517
, pp. 495-497
-
-
Kohler, G.1
Milstein, C.2
-
31
-
-
0029052658
-
Rabbit monoclonal antibodies: Generating a fusion partner to produce rabbit-rabbit hybridomas
-
H Spieker-Polet, P Sethupathi, PC Yam and KL Knight: Rabbit monoclonal antibodies: generating a fusion partner to produce rabbit-rabbit hybridomas. Proc Natl Acad Sci USA, 92(20), 9348-52 (1995).
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, Issue.20
, pp. 9348-9352
-
-
Spieker-Polet, H.1
Sethupathi, P.2
Yam, P.C.3
Knight, K.L.4
-
32
-
-
3142685154
-
In-vitro protein evolution by ribosome display and mRNA display
-
DOI 10.1016/j.jim.2004.04.008, PII S0022175904001309
-
D Lipovsek and A Pluckthun: In-vitro protein evolution by ribosome display and mRNA display. J Immunol Methods, 290(1-2), 51-67 (2004). (Pubitemid 38917130)
-
(2004)
Journal of Immunological Methods
, vol.290
, Issue.1-2
, pp. 51-67
-
-
Lipovsek, D.1
Pluckthun, A.2
-
33
-
-
3142743794
-
Antibodies from phage antibody libraries
-
DOI 10.1016/j.jim.2004.04.007, PII S0022175904001292
-
AR Bradbury and JD Marks: Antibodies from phage antibody libraries. J Immunol Methods, 290(1-2), 29-49 (2004). (Pubitemid 38917129)
-
(2004)
Journal of Immunological Methods
, vol.290
, Issue.1-2
, pp. 29-49
-
-
Bradbury, A.R.M.1
Marks, J.D.2
-
34
-
-
28444433078
-
Towards a human proteome atlas: High-throughput generation of mono-specific antibodies for tissue profiling
-
DOI 10.1002/pmic.200500072
-
P Nilsson, L Paavilainen, K Larsson, J Odling, M Sundberg, AC Andersson, C Kampf, A Persson, C Al-Khalili Szigyarto, J Ottosson, E Bjorling, S Hober, H Wernerus, K Wester, F Ponten and M Uhlen: Towards a human proteome atlas: high-throughput generation of mono-specific antibodies for tissue profiling. Proteomics, 5(17), 4327-37 (2005). (Pubitemid 41739911)
-
(2005)
Proteomics
, vol.5
, Issue.17
, pp. 4327-4337
-
-
Nilsson, P.1
Paavilainen, L.2
Larsson, K.3
Odling, J.4
Sundberg, M.5
Andersson, A.-C.6
Kampf, C.7
Persson, A.8
Szigyarto, C.A.-K.9
Ottosson, J.10
Bjorling, E.11
Hober, S.12
Wernerus, H.13
Wester, K.14
Ponten, F.15
Uhlen, M.16
-
35
-
-
0038644141
-
Human leucocyte differentiation antigens
-
H Zola and BW Swart: Human leucocyte differentiation antigens. Trends Immunol, 24(7), 353-4 (2003).
-
(2003)
Trends Immunol
, vol.24
, Issue.7
, pp. 353-354
-
-
Zola, H.1
Swart, B.W.2
-
36
-
-
33947690177
-
Medical applications of leukocyte surface molecules-The CD molecules
-
H Zola: Medical applications of leukocyte surface molecules-the CD molecules. Mol Med, 12(11-12), 312-6 (2006).
-
(2006)
Mol Med
, vol.12
, pp. 6
-
-
Zola, H.1
-
37
-
-
0014667377
-
Cell sorting: Automated separation of mammalian cells as a function of intracellular fluorescence
-
HR Hulett, WA Bonner, J Barrett and LA Herzenberg: Cell sorting: automated separation of mammalian cells as a function of intracellular fluorescence. Science, 166(906), 747-9 (1969).
-
(1969)
Science
, vol.166
, Issue.906
, pp. 747-749
-
-
Hulett, H.R.1
Bonner, W.A.2
Barrett, J.3
Herzenberg, L.A.4
-
38
-
-
0016927159
-
Fluorescence-Activated cell sorting
-
LA Herzenberg and RG Sweet: Fluorescence-activated cell sorting. Sci Am, 234(3), 108-17 (1976).
-
(1976)
Sci Am
, vol.234
, Issue.3
, pp. 108-117
-
-
Herzenberg, L.A.1
Sweet, R.G.2
-
39
-
-
0015308967
-
Fluorescence activated cell sorting
-
WA Bonner, HR Hulett, RG Sweet and LA Herzenberg: Fluorescence activated cell sorting. Rev Sci Instrum, 43(3), 404-9 (1972).
-
(1972)
Rev Sci Instrum
, vol.43
, Issue.3
, pp. 404-409
-
-
Bonner, W.A.1
Hulett, H.R.2
Sweet, R.G.3
Herzenberg, L.A.4
-
40
-
-
77953290713
-
An extended antibody microarray for surface profiling metastatic melanoma
-
KL Kaufman, L Belov, P Huang, S Mactier, RA Scolyer, GJ Mann and RI Christopherson: An extended antibody microarray for surface profiling metastatic melanoma. J Immunol Methods, 358(1-2), 23-34 (2010).
-
(2010)
J Immunol Methods
, vol.358
, Issue.1-2
, pp. 23-34
-
-
Kaufman, K.L.1
Belov, L.2
Huang, P.3
Mactier, S.4
Scolyer, R.A.5
Mann, G.J.6
Christopherson, R.I.7
-
41
-
-
44049105535
-
Experimental and computational approaches to quantitative proteomics: Status quo and outlook
-
DOI 10.1016/j.jprot.2007.12.001, PII S1874391907002539
-
A Panchaud, M Affolter, P Moreillon and M Kussmann: Experimental and computational approaches to quantitative proteomics: status quo and outlook. J proteomics, 71(1), 19-33 (2008). (Pubitemid 351711645)
-
(2008)
Journal of Proteomics
, vol.71
, Issue.1
, pp. 19-33
-
-
Panchaud, A.1
Affolter, M.2
Moreillon, P.3
Kussmann, M.4
-
42
-
-
33644524918
-
Mass spectrometry-based proteomics turns quantitative
-
SE Ong and M Mann: Mass spectrometry-based proteomics turns quantitative. Nat Chem Biol, 1(5), 252-62 (2005).
-
(2005)
Nat Chem Biol
, vol.1
, Issue.5
, pp. 252-262
-
-
Ong, S.E.1
Mann, M.2
-
43
-
-
0037435030
-
Mass spectrometry-based proteomics
-
DOI 10.1038/nature01511
-
R Aebersold and M Mann: Mass spectrometry-based proteomics. Nature, 422(6928), 198-207 (2003). (Pubitemid 36362757)
-
(2003)
Nature
, vol.422
, Issue.6928
, pp. 198-207
-
-
Aebersold, R.1
Mann, M.2
-
44
-
-
76949097340
-
Quantitative proteomics reveals subset-specific viral recognition in dendritic cells
-
CA Luber, J Cox, H Lauterbach, B Fancke, M Selbach, J Tschopp, S Akira, M Wiegand, H Hochrein, M O'Keeffe and M Mann: Quantitative proteomics reveals subset-specific viral recognition in dendritic cells. Immunity, 32(2), 279-89 (2010).
-
(2010)
Immunity
, vol.32
, Issue.2
, pp. 279-289
-
-
Luber, C.A.1
Cox, J.2
Lauterbach, H.3
Fancke, B.4
Selbach, M.5
Tschopp, J.6
Akira, S.7
Wiegand, M.8
Hochrein, H.9
O'keeffe, M.10
Mann, M.11
-
45
-
-
33645993265
-
Global survey of organ and organelle protein expression in mouse: Combined proteomic and transcriptomic profiling
-
T Kislinger, B Cox, A Kannan, C Chung, P Hu, A Ignatchenko, MS Scott, AO Gramolini, Q Morris, MT Hallett, J Rossant, TR Hughes, B Frey and A Emili: Global survey of organ and organelle protein expression in mouse: combined proteomic and transcriptomic profiling. Cell, 125(1), 173-86 (2006).
-
(2006)
Cell
, vol.125
, Issue.1
, pp. 173-186
-
-
Kislinger, T.1
Cox, B.2
Kannan, A.3
Chung, C.4
Hu, P.5
Ignatchenko, A.6
Scott, M.S.7
Gramolini, A.O.8
Morris, Q.9
Hallett, M.T.10
Rossant, J.11
Hughes, T.R.12
Frey, B.13
Emili, A.14
-
46
-
-
33646473345
-
A mammalian organelle map by protein correlation profiling
-
LJ Foster, CL de Hoog, Y Zhang, X Xie, VK Mootha and M Mann: A mammalian organelle map by protein correlation profiling. Cell, 125(1), 187-99 (2006).
-
(2006)
Cell
, vol.125
, Issue.1
, pp. 187-199
-
-
Foster, L.J.1
De Hoog, C.L.2
Zhang, Y.3
Xie, X.4
Mootha, V.K.5
Mann, M.6
-
47
-
-
77951637328
-
Isolation of cell surface proteins for mass spectrometrybased proteomics
-
S Elschenbroich, Y Kim, JA Medin and T Kislinger: Isolation of cell surface proteins for mass spectrometrybased proteomics. Expert Rev Proteomics, 7(1), 141-54 (2010).
-
(2010)
Expert Rev Proteomics
, vol.7
, Issue.1
, pp. 141-154
-
-
Elschenbroich, S.1
Kim, Y.2
Medin, J.A.3
Kislinger, T.4
-
48
-
-
77149165069
-
Technologies for plasma membrane proteomics
-
SJ Cordwell and TE Thingholm: Technologies for plasma membrane proteomics. Proteomics, 10(4), 611-27 (2010).
-
(2010)
Proteomics
, vol.10
, Issue.4
, pp. 611-627
-
-
Cordwell, S.J.1
Thingholm, T.E.2
-
49
-
-
0030333694
-
Progress with proteome projects: Why all proteins expressed by a genome should be identified and how to do it
-
MR Wilkins, JC Sanchez, AA Gooley, RD Appel, I Humphery-Smith, DF Hochstrasser and KL Williams: Progress with proteome projects: why all proteins expressed by a genome should be identified and how to do it. Biotechnol Genet Eng Rev, 13, 19-50 (1996).
-
(1996)
Biotechnol Genet Eng Rev
, vol.13
, pp. 19-50
-
-
Wilkins, M.R.1
Sanchez, J.C.2
Gooley, A.A.3
Appel, R.D.4
Humphery-Smith, I.5
Hochstrasser, D.F.6
Williams, K.L.7
-
50
-
-
0029033175
-
Progress with geneproduct mapping of the Mollicutes: Mycoplasma genitalium
-
VC Wasinger, SJ Cordwell, A Cerpa-Poljak, JX Yan, AA Gooley, MR Wilkins, MW Duncan, R Harris, KL Williams and I Humphery-Smith: Progress with geneproduct mapping of the Mollicutes: Mycoplasma genitalium. Electrophoresis, 16(7), 1090-4 (1995).
-
(1995)
Electrophoresis
, vol.16
, Issue.7
, pp. 1090-1094
-
-
Wasinger, V.C.1
Cordwell, S.J.2
Cerpa-Poljak, A.3
Yan, J.X.4
Gooley, A.A.5
Wilkins, M.R.6
Duncan, M.W.7
Harris, R.8
Williams, K.L.9
Humphery-Smith, I.10
-
51
-
-
77958489760
-
Generating and navigating proteome maps using mass spectrometry
-
CH Ahrens, E Brunner, E Qeli, K Basler and R Aebersold: Generating and navigating proteome maps using mass spectrometry. Nat Rev Mol Cell Biol, 11(11), 789-801 (2010).
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, Issue.11
, pp. 789-801
-
-
Ahrens, C.H.1
Brunner, E.2
Qeli, E.3
Basler, K.4
Aebersold, R.5
-
52
-
-
2342611959
-
Proteomics/genomics and signaling in lymphocytes
-
DOI 10.1016/j.coi.2004.03.016, PII S0952791504000536
-
B Wollscheid, JD Watts and R Aebersold: Proteomics/genomics and signaling in lymphocytes. Curr Opin Immunol, 16(3), 337-44 (2004). (Pubitemid 38595372)
-
(2004)
Current Opinion in Immunology
, vol.16
, Issue.3
, pp. 337-344
-
-
Wollscheid, B.1
Watts, J.D.2
Aebersold, R.3
-
53
-
-
77954464041
-
Proteomics: A pragmatic perspective
-
P Mallick and B Kuster: Proteomics: a pragmatic perspective. Nat Biotechnol, 28(7), 695-709 (2010).
-
(2010)
Nat Biotechnol
, vol.28
, Issue.7
, pp. 695-709
-
-
Mallick, P.1
Kuster, B.2
-
54
-
-
68949206409
-
Applying mass spectrometry-based proteomics to genetics, genomics and network biology
-
M Gstaiger and R Aebersold: Applying mass spectrometry-based proteomics to genetics, genomics and network biology. Nat Rev Genetics, 10(9), 617-27 (2009).
-
(2009)
Nat Rev Genetics
, vol.10
, Issue.9
, pp. 617-627
-
-
Gstaiger, M.1
Aebersold, R.2
-
55
-
-
77952956167
-
Decoding signalling networks by mass spectrometry-based proteomics
-
C Choudhary and M Mann: Decoding signalling networks by mass spectrometry-based proteomics. Nat Rev Mol Cell Biol, 11(6), 427-39 (2010).
-
(2010)
Nat Rev Mol Cell Biol
, vol.11
, Issue.6
, pp. 427-439
-
-
Choudhary, C.1
Mann, M.2
-
56
-
-
0035241690
-
Mass spectrometry in proteomics
-
DOI 10.1021/cr990076h
-
R Aebersold and DR Goodlett: Mass spectrometry in proteomics. Chem Rev, 101(2), 269-95 (2001). (Pubitemid 32325797)
-
(2001)
Chemical Reviews
, vol.101
, Issue.2
, pp. 269-295
-
-
Aebersold, R.1
Goodlett, D.R.2
-
57
-
-
68749094119
-
Full dynamic range proteome analysis of S, Cerevisiae by targeted proteomics
-
P Picotti, B Bodenmiller, LN Mueller, B Domon and R Aebersold: Full dynamic range proteome analysis of S. cerevisiae by targeted proteomics. Cell, 138(4), 795-806 (2009).
-
(2009)
Cell
, vol.138
, Issue.4
, pp. 795-806
-
-
Picotti, P.1
Bodenmiller, B.2
Mueller, L.N.3
Domon, B.4
Aebersold, R.5
-
58
-
-
0142215475
-
Global analysis of protein expression in yeast
-
DOI 10.1038/nature02046
-
S Ghaemmaghami, WK Huh, K Bower, RW Howson, A Belle, N Dephoure, EK O'Shea and JS Weissman: Global analysis of protein expression in yeast. Nature, 425(6959), 737-41 (2003). (Pubitemid 37314318)
-
(2003)
Nature
, vol.425
, Issue.6959
, pp. 737-741
-
-
Ghaemmaghami, S.1
Huh, W.-K.2
Bower, K.3
Howson, R.W.4
Belle, A.5
Dephoure, N.6
O'Shea, E.K.7
Weissman, J.S.8
-
59
-
-
0038364020
-
Organelle proteomics: Implications for subcellular fractionation in proteomics
-
DOI 10.1161/01.RES.0000071748.48338.25
-
LA Huber, K Pfaller and I Vietor: Organelle proteomics: implications for subcellular fractionation in proteomics. Circ Res, 92(9), 962-8 (2003). (Pubitemid 36588494)
-
(2003)
Circulation Research
, vol.92
, Issue.9
, pp. 962-968
-
-
Huber, L.A.1
Pfaller, K.2
Vietor, I.3
-
60
-
-
46049087396
-
Purification of organelles from mammalian cells
-
Chapter 8, Unit 8 1B
-
JD Castle: Purification of organelles from mammalian cells. Curr Protoc Immunol, Chapter 8, Unit 8 1B (2003).
-
(2003)
Curr Protoc Immunol
-
-
Castle, J.D.1
-
61
-
-
77952319515
-
Differential expression of pathogen-recognition molecules between dendritic cell subsets revealed by plasma membrane proteomic analysis
-
E Segura, E Kapp, N Gupta, J Wong, J Lim, H Ji, WR Heath, R Simpson and JA Villadangos: Differential expression of pathogen-recognition molecules between dendritic cell subsets revealed by plasma membrane proteomic analysis. Mol Immunol, 47(9), 1765-73 (2010).
-
(2010)
Mol Immunol
, vol.47
, Issue.9
, pp. 1765-1773
-
-
Segura, E.1
Kapp, E.2
Gupta, N.3
Wong, J.4
Lim, J.5
Ji, H.6
Heath, W.R.7
Simpson, R.8
Villadangos, J.A.9
-
62
-
-
29244447154
-
Cell surface labeling and mass spectrometry reveal diversity of cell surface markers and signaling molecules expressed in undifferentiated mouse embryonic stem cells
-
DOI 10.1074/mcp.M500216-MCP200
-
K Nunomura, K Nagano, C Itagaki, M Taoka, N Okamura, Y Yamauchi, S Sugano, N Takahashi, T Izumi and T Isobe: Cell surface labeling and mass spectrometry reveal diversity of cell surface markers and signaling molecules expressed in undifferentiated mouse embryonic stem cells. Mol Cell Proteomics, 4(12), 1968-76 (2005). (Pubitemid 41830191)
-
(2005)
Molecular and Cellular Proteomics
, vol.4
, Issue.12
, pp. 1968-1976
-
-
Nunomura, K.1
Nagano, K.2
Itagaki, C.3
Masato, T.4
Okamura, N.5
Yamauchi, Y.6
Sugano, S.7
Takahashi, N.8
Izumi, T.9
Isobe, T.10
-
63
-
-
55749099458
-
Biotinylation reagents for the study of cell surface proteins
-
G Elia: Biotinylation reagents for the study of cell surface proteins. Proteomics, 8(19), 4012-24 (2008).
-
(2008)
Proteomics
, vol.8
, Issue.19
, pp. 4012-4024
-
-
Elia, G.1
-
64
-
-
68549122966
-
Comprehensive profiling of the cell surface proteome of Sy5Y neuroblastoma cells yields a subset of proteins associated with tumor differentiation
-
J Garcia, V Faca, J Jarzembowski, Q Zhang, J Park and S Hanash: Comprehensive profiling of the cell surface proteome of Sy5Y neuroblastoma cells yields a subset of proteins associated with tumor differentiation. J Proteome Res, 8(8), 3791-6 (2009).
-
(2009)
J Proteome Res
, vol.8
, Issue.8
, pp. 3791-3796
-
-
Garcia, J.1
Faca, V.2
Jarzembowski, J.3
Zhang, Q.4
Park, J.5
Hanash, S.6
-
65
-
-
18744399322
-
In vivo protein biotinylation for identification of organ-specific antigens accessible from the vasculature
-
DOI 10.1038/NMETH745
-
JN Rybak, A Ettorre, B Kaissling, R Giavazzi, D Neri and G Elia: In vivo protein biotinylation for identification of organ-specific antigens accessible from the vasculature. Nat Methods, 2(4), 291-8 (2005). (Pubitemid 41131011)
-
(2005)
Nature Methods
, vol.2
, Issue.4
, pp. 291-298
-
-
Ryback, J.-N.1
Ettorre, A.2
Kaissling, B.3
Giavazzi, R.4
Neri, D.5
Elia, G.6
-
66
-
-
0021112527
-
Coating cells with colloidal silica for high yield isolation of plasma membrane sheets and identification of transmembrane proteins
-
LK Chaney and BS Jacobson: Coating cells with colloidal silica for high yield isolation of plasma membrane sheets and identification of transmembrane proteins. J Biol Chem, 258(16), 10062-72 (1983).
-
(1983)
J Biol Chem
, vol.258
, Issue.16
, pp. 10062-10072
-
-
Chaney, L.K.1
Jacobson, B.S.2
-
67
-
-
3543023287
-
Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture
-
DOI 10.1038/nbt993
-
E Durr, J Yu, KM Krasinska, LA Carver, JR Yates, JE Testa, P Oh and JE Schnitzer: Direct proteomic mapping of the lung microvascular endothelial cell surface in vivo and in cell culture. Nat Biotechnol, 22(8), 985-92 (2004). (Pubitemid 39014475)
-
(2004)
Nature Biotechnology
, vol.22
, Issue.8
, pp. 985-992
-
-
Durr, E.1
Yu, J.2
Krasinska, K.M.3
Carver, L.A.4
Yates III, J.R.5
Testa, J.E.6
Oh, P.7
Schnitzer, J.E.8
-
68
-
-
79951530395
-
On the development of plasma protein biomarkers
-
S Surinova, R Schiess, R Huttenhain, F Cerciello, B Wollscheid and R Aebersold: On the development of plasma protein biomarkers. J Proteome Res, 10(1), 5-16 (2011).
-
(2011)
J Proteome Res
, vol.10
, Issue.1
, pp. 5-16
-
-
Surinova, S.1
Schiess, R.2
Huttenhain, R.3
Cerciello, F.4
Wollscheid, B.5
Aebersold, R.6
-
69
-
-
59149084542
-
Targeted proteomic strategy for clinical biomarker discovery
-
R Schiess, B Wollscheid and R Aebersold: Targeted proteomic strategy for clinical biomarker discovery. Mol Oncol, 3(1), 33-44 (2009).
-
(2009)
Mol Oncol
, vol.3
, Issue.1
, pp. 33-44
-
-
Schiess, R.1
Wollscheid, B.2
Aebersold, R.3
-
70
-
-
79952751238
-
Cancer genetics-guided discovery of serum biomarker signatures for diagnosis and prognosis of prostate cancer
-
I Cima, R Schiess, P Wild, M Kaelin, P Schuffler, V Lange, P Picotti, R Ossola, A Templeton, O Schubert, T Fuchs, T Leippold, S Wyler, J Zehetner, W Jochum, J Buhmann, T Cerny, H Moch, S Gillessen, R Aebersold and W Krek: Cancer genetics-guided discovery of serum biomarker signatures for diagnosis and prognosis of prostate cancer. Proc Natl Acad Sci USA, (2011).
-
(2011)
Proc Natl Acad Sci USA
-
-
Cima, I.1
Schiess, R.2
Wild, P.3
Kaelin, M.4
Schuffler, P.5
Lange, V.6
Picotti, P.7
Ossola, R.8
Templeton, A.9
Schubert, O.10
Fuchs, T.11
Leippold, T.12
Wyler, S.13
Zehetner, J.14
Jochum, W.15
Buhmann, J.16
Cerny, T.17
Moch, H.18
Gillessen, S.19
Aebersold, R.20
Krek, W.21
more..
-
71
-
-
0030219388
-
Why mammalian cell surface proteins are glycoproteins
-
DOI 10.1016/0968-0004(96)10034-7
-
CG Gahmberg and M Tolvanen: Why mammalian cell surface proteins are glycoproteins. Trends Biochem Sci, 21(8), 308-11 (1996). (Pubitemid 26281034)
-
(1996)
Trends in Biochemical Sciences
, vol.21
, Issue.8
, pp. 308-311
-
-
Gahmberg, C.G.1
Tolvanen, M.2
-
72
-
-
0032754473
-
On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database
-
R Apweiler, H Hermjakob and N Sharon: On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database. Biochim Biophys Acta, 1473(1), 4-8 (1999).
-
(1999)
Biochim Biophys Acta
, vol.1473
, Issue.1
, pp. 4-8
-
-
Apweiler, R.1
Hermjakob, H.2
Sharon, N.3
-
73
-
-
0028490510
-
Protein surface oligosaccharides and protein function
-
RJ Woods, CJ Edge and RA Dwek: Protein surface oligosaccharides and protein function. Nat Struct Biol, 1(8), 499-501 (1994).
-
(1994)
Nat Struct Biol
, vol.1
, Issue.8
, pp. 499-501
-
-
Woods, R.J.1
Edge, C.J.2
Dwek, R.A.3
-
74
-
-
0002495856
-
Historical background and overview
-
Eds: A Varki, RD Cummings, JD Esko, HH Freeze, P Stanley, CR Bertozzi, GW Hart, ME Etzler Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
A Varki and N Sharon. Historical background and overview. In: Essentials of Glycobiology, Sect Major classes of glycoconjugates and glycans. Eds: A Varki, RD Cummings, JD Esko, HH Freeze, P Stanley, CR Bertozzi, GW Hart, ME Etzler Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (2009).
-
(2009)
Essentials of Glycobiology, Sect Major Classes of Glycoconjugates and Glycans
-
-
Varki, A.1
Sharon, N.2
-
75
-
-
0020713174
-
Structural requirements of N-glycosylation of proteins, Studies with proline peptides as conformational probes
-
E Bause: Structural requirements of N-glycosylation of proteins. Studies with proline peptides as conformational probes. Biochem J, 209(2), 331-6 (1983).
-
(1983)
Biochem J
, vol.209
, Issue.2
, pp. 331-336
-
-
Bause, E.1
-
76
-
-
77953240454
-
Precision mapping of an in vivo N-glycoproteome reveals rigid topological and sequence constraints
-
DF Zielinska, F Gnad, JR Wisniewski and M Mann: Precision mapping of an in vivo N-glycoproteome reveals rigid topological and sequence constraints. Cell, 141(5), 897-907 (2010).
-
(2010)
Cell
, vol.141
, Issue.5
, pp. 897-907
-
-
Zielinska, D.F.1
Gnad, F.2
Wisniewski, J.R.3
Mann, M.4
-
77
-
-
0036703175
-
Plant lectins: Occurrence, biochemistry, functions and applications
-
DOI 10.1023/A:1020687518999
-
H Rudiger and HJ Gabius: Plant lectins: occurrence, biochemistry, functions and applications. Glycoconj J, 18(8), 589-613 (2001). (Pubitemid 35341855)
-
(2001)
Glycoconjugate Journal
, vol.18
, Issue.8
, pp. 589-613
-
-
Rudiger, H.1
Gabius, H.-J.2
-
78
-
-
0030469036
-
Lectin-carbohydrate interaction in the immune system
-
DOI 10.1016/S0165-2427(96)05718-2, PII S0165242796057182
-
Y Ni and I Tizard: Lectin-carbohydrate interaction in the immune system. Vet Immunol Immunopathol, 55(1-3), 205-23 (1996). (Pubitemid 27041605)
-
(1996)
Veterinary Immunology and Immunopathology
, vol.55
, Issue.1-3
, pp. 205-223
-
-
Ni, Y.1
Tizard, I.2
-
79
-
-
34548836006
-
Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site-specific stable isotope tagging
-
H Kaji, Y Yamauchi, N Takahashi and T Isobe: Mass spectrometric identification of N-linked glycopeptides using lectin-mediated affinity capture and glycosylation site-specific stable isotope tagging. Nat Protoc, 1(6), 3019- 27 (2006).
-
(2006)
Nat Protoc
, vol.1
, Issue.6
, pp. 3019-3027
-
-
Kaji, H.1
Yamauchi, Y.2
Takahashi, N.3
Isobe, T.4
-
80
-
-
0037685263
-
Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins
-
DOI 10.1038/nbt829
-
H Kaji, H Saito, Y Yamauchi, T Shinkawa, M Taoka, J Hirabayashi, K Kasai, N Takahashi and T Isobe: Lectin affinity capture, isotope-coded tagging and mass spectrometry to identify N-linked glycoproteins. Nat Biotechnol, 21(6), 667-72 (2003). (Pubitemid 36638094)
-
(2003)
Nature Biotechnology
, vol.21
, Issue.6
, pp. 667-672
-
-
Kaji, H.1
Saito, H.2
Yamauchi, Y.3
Shinkawa, T.4
Taoka, M.5
Hirabayashi, J.6
Kasai, K.-I.7
Takahashi, N.8
Isobe, T.9
-
82
-
-
0035836061
-
Proteomics of glycoproteins based on affinity selection of glycopeptides from tryptic digests
-
DOI 10.1016/S0378-4347(00)00550-8, PII S0378434700005508
-
M Geng, X Zhang, M Bina and F Regnier: Proteomics of glycoproteins based on affinity selection of glycopeptides from tryptic digests. J Chromatogr B Biomed Sci Appl, 752(2), 293-306 (2001). (Pubitemid 32168163)
-
(2001)
Journal of Chromatography B: Biomedical Sciences and Applications
, vol.752
, Issue.2
, pp. 293-306
-
-
Geng, M.1
Zhang, X.2
Bina, M.3
Regnier, F.4
-
83
-
-
33644690335
-
Elucidation of N-glycosylation sites on human platelet proteins: A glycoproteomic approach
-
DOI 10.1074/mcp.M500324-MCP200
-
U Lewandrowski, J Moebius, U Walter and A Sickmann: Elucidation of N-glycosylation sites on human platelet proteins: a glycoproteomic approach. Mol Cell Proteomics, 5(2), 226-33 (2006). (Pubitemid 43329301)
-
(2006)
Molecular and Cellular Proteomics
, vol.5
, Issue.2
, pp. 226-233
-
-
Lewandrowski, U.1
Moebius, J.2
Walter, U.3
Sickmann, A.4
-
84
-
-
4444269513
-
Lectin affinity as an approach to the proteomic analysis of membrane glycoproteins
-
DOI 10.1021/pr049937f
-
D Ghosh, O Krokhin, M Antonovici, W Ens, KG Standing, RC Beavis and JA Wilkins: Lectin affinity as an approach to the proteomic analysis of membrane glycoproteins. J Proteome Res, 3(4), 841-50 (2004). (Pubitemid 39166246)
-
(2004)
Journal of Proteome Research
, vol.3
, Issue.4
, pp. 841-850
-
-
Ghosh, D.1
Krokhin, O.2
Antonovici, M.3
Ens, W.4
Standing, K.G.5
Beavis, R.C.6
Wilkins, J.A.7
-
85
-
-
1242339573
-
Screening for N-glycosylated proteins by liquid chromatography mass spectrometry
-
DOI 10.1002/pmic.200300556
-
J Bunkenborg, BJ Pilch, AV Podtelejnikov and JR Wisniewski: Screening for N-glycosylated proteins by liquid chromatography mass spectrometry. Proteomics, 4(2), 454-65 (2004). (Pubitemid 38235265)
-
(2004)
Proteomics
, vol.4
, Issue.2
, pp. 454-465
-
-
Bunkenborg, J.1
Pilch, B.J.2
Podtelejnikov, A.V.3
Wisniewski, J.R.4
-
86
-
-
77049305703
-
Periodate oxidation of carbohydrates
-
JM Bobbitt: Periodate oxidation of carbohydrates. Adv Carbohydr Chem, 48(11), 1-41 (1956).
-
(1956)
Adv Carbohydr Chem
, vol.48
, Issue.11
, pp. 1-41
-
-
Bobbitt, J.M.1
-
87
-
-
0038699625
-
Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry
-
DOI 10.1038/nbt827
-
H Zhang, XJ Li, DB Martin and R Aebersold: Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry. Nat Biotechnol, 21(6), 660-6 (2003). (Pubitemid 36638093)
-
(2003)
Nature Biotechnology
, vol.21
, Issue.6
, pp. 660-666
-
-
Zhang, H.1
Li, X.-J.2
Martin, D.B.3
Aebersold, R.4
-
88
-
-
34547800600
-
Isolation of N-linked glycopeptides from plasma
-
DOI 10.1021/ac0623181
-
Y Zhou, R Aebersold and H Zhang: Isolation of N-linked glycopeptides from plasma. Anal Chem, 79(15), 5826-37 (2007). (Pubitemid 47229834)
-
(2007)
Analytical Chemistry
, vol.79
, Issue.15
, pp. 5826-5837
-
-
Zhou, Y.1
Aebersold, R.2
Zhang, H.3
-
89
-
-
33846548168
-
Mass spectrometric detection of tissue proteins in plasma
-
DOI 10.1074/mcp.M600160-MCP200
-
H Zhang, AY Liu, P Loriaux, B Wollscheid, Y Zhou, JD Watts and R Aebersold: Mass spectrometric detection of tissue proteins in plasma. Mol Cell Proteomics, 6(1), 64-71 (2007). (Pubitemid 46152692)
-
(2007)
Molecular and Cellular Proteomics
, vol.6
, Issue.1
, pp. 64-71
-
-
Zhang, H.1
Liu, A.Y.2
Loriaux, P.3
Wollscheid, B.4
Zhou, Y.5
Watts, J.D.6
Aebersold, R.7
-
90
-
-
34247478903
-
Comparative analysis of cell surface proteins in chronic and acute leukemia cell lines
-
DOI 10.1016/j.bbrc.2007.03.191, PII S0006291X07006584
-
SJ Lee, KH Kim, JS Park, JW Jung, YH Kim, SK Kim, WS Kim, HG Goh, SH Kim, JS Yoo, DW Kim and KP Kim: Comparative analysis of cell surface proteins in chronic and acute leukemia cell lines. Biochem Biophys Res Commun, 357(3), 620-6 (2007). (Pubitemid 46653824)
-
(2007)
Biochemical and Biophysical Research Communications
, vol.357
, Issue.3
, pp. 620-626
-
-
Lee, S.J.1
Kim, K.-H.2
Park, J.S.3
Jung, J.W.4
Kim, Y.H.5
Kim, S.K.6
Kim, W.-S.7
Goh, H.-g.8
Kim, S.-h.9
Yoo, J.-S.10
Kim, D.-W.11
Kim, K.P.12
-
91
-
-
77950662044
-
Optimizing performance of glycopeptide capture for plasma proteomics
-
FS Berven, R Ahmad, KR Clauser and SA Carr: Optimizing performance of glycopeptide capture for plasma proteomics. J Proteome Res, 9(4), 1706-15 (2010).
-
(2010)
J Proteome Res
, vol.9
, Issue.4
, pp. 1706-1715
-
-
Berven, F.S.1
Ahmad, R.2
Clauser, K.R.3
Carr, S.A.4
-
92
-
-
64349089985
-
Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins
-
B Wollscheid, D Bausch-Fluck, C Henderson, R O'Brien, M Bibel, R Schiess, R Aebersold and JD Watts: Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins. Nat Biotechnol, 27(4), 378-86 (2009).
-
(2009)
Nat Biotechnol
, vol.27
, Issue.4
, pp. 378-386
-
-
Wollscheid, B.1
Bausch-Fluck, D.2
Henderson, C.3
O'brien, R.4
Bibel, M.5
Schiess, R.6
Aebersold, R.7
Watts, J.D.8
-
93
-
-
0024007567
-
Biocytin hydrazide-A selective label for sialic acids, galactose, and other sugars in glycoconjugates using avidin-biotin technology
-
EA Bayer, H Ben-Hur and M Wilchek: Biocytin hydrazide-a selective label for sialic acids, galactose, and other sugars in glycoconjugates using avidin-biotin technology. Anal Biochem, 170(2), 271-81 (1988).
-
(1988)
Anal Biochem
, vol.170
, Issue.2
, pp. 271-281
-
-
Bayer, E.A.1
Ben-Hur, H.2
Wilchek, M.3
-
94
-
-
66149125323
-
Analysis of cell surface proteome changes via label-free, quantitative mass spectrometry
-
R Schiess, LN Mueller, A Schmidt, M Mueller, B Wollscheid and R Aebersold: Analysis of cell surface proteome changes via label-free, quantitative mass spectrometry. Mol Cell Proteomics, 8(4), 624-38 (2009).
-
(2009)
Mol Cell Proteomics
, vol.8
, Issue.4
, pp. 624-638
-
-
Schiess, R.1
Mueller, L.N.2
Schmidt, A.3
Mueller, M.4
Wollscheid, B.5
Aebersold, R.6
-
95
-
-
77957690860
-
Proteomic cell surface phenotyping of differentiating acute myeloid leukemia cells
-
A Hofmann, B Gerrits, A Schmidt, T Bock, D Bausch- Fluck, R Aebersold and B Wollscheid: Proteomic cell surface phenotyping of differentiating acute myeloid leukemia cells. Blood, 116(13), e26-e34 (2010).
-
(2010)
Blood
, vol.116
, Issue.13
-
-
Hofmann, A.1
Gerrits, B.2
Schmidt, A.3
Bock, T.4
Bausch-Fluck, D.5
Aebersold, R.6
Wollscheid, B.7
-
96
-
-
72149120326
-
The mouse C2C12 myoblast cell surface Nlinked glycoproteome: Identification, glycosite occupancy, and membrane orientation
-
RL Gundry, K Raginski, Y Tarasova, I Tchernyshyov, D Bausch-Fluck, ST Elliott, KR Boheler, JE Van Eyk and B Wollscheid: The mouse C2C12 myoblast cell surface Nlinked glycoproteome: identification, glycosite occupancy, and membrane orientation. Mol Cell Proteomics, 8(11), 2555-69 (2009).
-
(2009)
Mol Cell Proteomics
, vol.8
, Issue.11
, pp. 2555-2569
-
-
Gundry, R.L.1
Raginski, K.2
Tarasova, Y.3
Tchernyshyov, I.4
Bausch-Fluck, D.5
Elliott, S.T.6
Boheler, K.R.7
Eyk, J.E.V.8
Wollscheid, B.9
-
97
-
-
0036583926
-
Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
-
SE Ong, B Blagoev, I Kratchmarova, DB Kristensen, H Steen, A Pandey, and M Mann: Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol Cell Proteomics, 1, 376-386 (2002).
-
(2002)
Mol Cell Proteomics
, vol.1
, pp. 376-386
-
-
Ong, S.E.1
Blagoev, B.2
Kratchmarova, I.3
Kristensen, D.B.4
Steen, H.5
Pandey, A.6
Mann, M.7
-
98
-
-
35348965139
-
SuperHirn - A novel tool for high resolution LC-MS-based peptide/protein profiling
-
DOI 10.1002/pmic.200700057
-
LN Mueller, O Rinner, A Schmidt, S Letarte, B Bodenmiller, MY Brusniak, O Vitek, R Aebersold and M Müller: SuperHirn - a novel tool for high resolution LCMS- based peptide/protein profiling. Proteomics, 7(19), 3470-80 (2007). (Pubitemid 47597670)
-
(2007)
Proteomics
, vol.7
, Issue.19
, pp. 3470-3480
-
-
Mueller, L.N.1
Rinner, O.2
Schmidt, A.3
Letarte, S.4
Bodenmiller, B.5
Brusniak, M.-Y.6
Vitek, O.7
Aebersold, R.8
Muller, M.9
-
99
-
-
34748916981
-
Quantitative mass spectrometry in proteomics: A critical review
-
DOI 10.1007/s00216-007-1486-6, Proteomics/Molecular Imaging
-
M Bantscheff, M Schirle, G Sweetman, J Rick and B Kuster: Quantitative mass spectrometry in proteomics: a critical review. Anal Bioanal Chem, 389(4), 1017-31 (2007). (Pubitemid 47482251)
-
(2007)
Analytical and Bioanalytical Chemistry
, vol.389
, Issue.4
, pp. 1017-1031
-
-
Bantscheff, M.1
Schirle, M.2
Sweetman, G.3
Rick, J.4
Kuster, B.5
-
100
-
-
33750130282
-
Identification of glycoproteins in human cerebrospinal fluid with a complementary proteomic approach
-
DOI 10.1021/pr060251s
-
S Pan, Y Wang, JF Quinn, ER Peskind, D Waichunas, JT Wimberger, J Jin, JG Li, D Zhu, C Pan and J Zhang: Identification of glycoproteins in human cerebrospinal fluid with a complementary proteomic approach. J Proteome Res, 5(10), 2769-79 (2006). (Pubitemid 44595178)
-
(2006)
Journal of Proteome Research
, vol.5
, Issue.10
, pp. 2769-2779
-
-
Pan, S.1
Wang, Y.2
Quinn, J.F.3
Peskind, E.R.4
Waichunas, D.5
Wimberger, J.T.6
Jin, J.7
Li, J.G.8
Zhu, D.9
Pan, C.10
Zhang, J.11
-
101
-
-
61649103556
-
Combining results from lectin affinity chromatography and glycocapture approaches substantially improves the coverage of the glycoproteome
-
CA McDonald, JY Yang, V Marathe, TY Yen and BA Macher: Combining results from lectin affinity chromatography and glycocapture approaches substantially improves the coverage of the glycoproteome. Mol Cell Proteomics, 8(2), 287-301 (2009).
-
(2009)
Mol Cell Proteomics
, vol.8
, Issue.2
, pp. 287-301
-
-
McDonald, C.A.1
Yang, J.Y.2
Marathe, V.3
Yen, T.Y.4
Macher, B.A.5
-
102
-
-
46749104456
-
A novel role for proteomics in the discovery of cell-surface markers on stem cells: Scratching the surface
-
DOI 10.1002/prca.200780122
-
RL Gundry, KR Boheler, JE Van Eyk and B Wollscheid: A novel role for proteomics in the discovery of cell-surface markers on stem cells: Scratching the surface. Proteomics Clin Appl, 2(6), 892-903 (2008). (Pubitemid 351943769)
-
(2008)
Proteomics - Clinical Applications
, vol.2
, Issue.6
, pp. 892-903
-
-
Gundry, R.L.1
Boheler, K.R.2
Van Eyk, J.E.3
Wollscheid, B.4
-
103
-
-
33846051741
-
MAPU: Max-planck unified database of organellar, cellular, tissue and body fluid proteomes
-
DOI 10.1093/nar/gkl784
-
Y Zhang, J Adachi, JV Olsen, R Shi, G de Souza, E Pasini, LJ Foster, B Macek, A Zougman, C Kumar, JR Wisniewski, W Jun and M Mann: MAPU: Max-Planck Unified database of organellar, cellular, tissue and body fluid proteomes. Nucleic Acids Res, 35(Database issue), D771-9 (2007). (Pubitemid 46056308)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.SUPPL. 1
-
-
Zhang, Y.1
Zhang, Y.2
Adachi, J.3
Olsen, J.V.4
Shi, R.5
De Souza, G.6
Pasini, E.7
Foster, L.J.8
Macek, B.9
Zougman, A.10
Kumar, C.11
Wisniewski, J.R.12
Jun, W.13
Mann, M.14
-
104
-
-
33749137280
-
UniPep-A database for human N-linked glycosites: A resource for biomarker discovery
-
H Zhang, P Loriaux, J Eng, D Campbell, A Keller, P Moss, R Bonneau, N Zhang, Y Zhou, B Wollscheid, K Cooke, EC Yi, H Lee, ER Peskind, J Zhang, RD Smith and R Aebersold: UniPep-a database for human N-linked glycosites: a resource for biomarker discovery. Genome Biol, 7(8), R73 (2006).
-
(2006)
Genome Biol
, vol.7
, Issue.8
-
-
Zhang, H.1
Loriaux, P.2
Eng, J.3
Campbell, D.4
Keller, A.5
Moss, P.6
Bonneau, R.7
Zhang, N.8
Zhou, Y.9
Wollscheid, B.10
Cooke, K.11
Yi, E.C.12
Lee, H.13
Peskind, E.R.14
Zhang, J.15
Smith, R.D.16
Aebersold, R.17
-
105
-
-
43049090085
-
Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring
-
V Lange, JA Malmstrom, J Didion, NL King, BP Johansson, J Schafer, J Rameseder, CH Wong, EW Deutsch, MY Brusniak, P Buhlmann, L Bjorck, B Domon and R Aebersold: Targeted quantitative analysis of Streptococcus pyogenes virulence factors by multiple reaction monitoring. Mol Cell Proteomics, 7(8), 1489-500 (2008).
-
(2008)
Mol Cell Proteomics
, vol.7
, Issue.8
, pp. 1489-1500
-
-
Lange, V.1
Malmstrom, J.A.2
Didion, J.3
King, N.L.4
Johansson, B.P.5
Schafer, J.6
Rameseder, J.7
Wong, C.H.8
Deutsch, E.W.9
Brusniak, M.Y.10
Buhlmann, P.11
Bjorck, L.12
Domon, B.13
Aebersold, R.14
-
106
-
-
33645721632
-
Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins
-
L Anderson and CL Hunter: Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins. Mol Cell Proteomics, 5(4), 573-88 (2006).
-
(2006)
Mol Cell Proteomics
, vol.5
, Issue.4
, pp. 573-588
-
-
Anderson, L.1
Hunter, C.L.2
-
107
-
-
77955027032
-
Targeted metabolomics for biomarker discovery
-
WJ Griffiths, T Koal, Y Wang, M Kohl, DP Enot and HP Deigner: Targeted metabolomics for biomarker discovery. Angew Chem, 49(32), 5426-45 (2010).
-
(2010)
Angew Chem
, vol.49
, Issue.32
, pp. 5426-5445
-
-
Griffiths, W.J.1
Koal, T.2
Wang, Y.3
Kohl, M.4
Enot, D.P.5
Deigner, H.P.6
-
108
-
-
0037649064
-
Liquid chromatography/atmospheric pressure ionization - Mass spectrometry in drug metabolism studies
-
DOI 10.1002/jms.481
-
R Kostiainen, T Kotiaho, T Kuuranne and S Auriola: Liquid chromatography/atmospheric pressure ionizationmass spectrometry in drug metabolism studies. J Mass Spectrom, 38(4), 357-72 (2003). (Pubitemid 36582213)
-
(2003)
Journal of Mass Spectrometry
, vol.38
, Issue.4
, pp. 357-372
-
-
Kostiainen, R.1
Kotiaho, T.2
Kuuranne, T.3
Auriola, S.4
-
109
-
-
4444276389
-
Development and evaluation of a reference measurement procedure for the determination of total 3,3′,5-triiodothyronine in human serum using isotope-dilution liquid chromatography-tandem mass spectrometry
-
DOI 10.1021/ac049516h
-
SS Tai, DM Bunk, E White and MJ Welch: Development and evaluation of a reference measurement procedure for the determination of total 3, 3', 5- triiodothyronine in human serum using isotope-dilution liquid chromatography-tandem mass spectrometry. Anal Chem, 76(17), 5092-6 (2004). (Pubitemid 39180338)
-
(2004)
Analytical Chemistry
, vol.76
, Issue.17
, pp. 5092-5096
-
-
Tai, S.S.-C.1
Bunk, D.M.2
White V, E.3
Welch, M.J.4
-
110
-
-
1842635419
-
Application of liquid chromatography with electrospray tandem mass spectrometry to the determination of a new generation of pesticides in processed fruits and vegetables
-
DOI 10.1016/j.chroma.2004.02.078, PII S0021967304003565
-
A Sannino, L Bolzoni and M Bandini: Application of liquid chromatography with electrospray tandem mass spectrometry to the determination of a new generation of pesticides in processed fruits and vegetables. J Chromatogr A, 1036(2), 161-9 (2004). (Pubitemid 38479701)
-
(2004)
Journal of Chromatography A
, vol.1036
, Issue.2
, pp. 161-169
-
-
Sannino, A.1
Bolzoni, L.2
Bandini, M.3
-
111
-
-
0346788870
-
Quantitative screening of protein biomarkers of early glycation, advanced glycation, oxidation and nitrosation in cellular and extracellular proteins by tandem mass spectrometry multiple reaction monitoring
-
N Ahmed and PJ Thornalley: Quantitative screening of protein biomarkers of early glycation, advanced glycation, oxidation and nitrosation in cellular and extracellular proteins by tandem mass spectrometry multiple reaction monitoring. Biochem Soc Trans, 31(Pt 6), 1417-22 (2003). (Pubitemid 38030990)
-
(2003)
Biochemical Society Transactions
, vol.31
, Issue.6
, pp. 1417-1422
-
-
Ahmed, N.1
Thornalley, P.J.2
-
112
-
-
79960179572
-
The human proteome project: Current state and future direction
-
P Legrain, R Aebersold, A Archakov, A Bairoch, K Bala, L Beretta, J Bergeron, C Borchers, GL Corthals, CE Costello, EW Deutsch, B Domon, W Hancock, F He, D Hochstrasser, G Marko-Varga, GH Salekdeh, S Sechi, M Snyder, S Srivastava, M Uhlen, CH Hu, T Yamamoto, YK Paik and GS Omenn: The human proteome project: Current state and future direction. Mol Cell Proteomics, (2011).
-
(2011)
Mol Cell Proteomics
-
-
Legrain, P.1
Aebersold, R.2
Archakov, A.3
Bairoch, A.4
Bala, K.5
Beretta, L.6
Bergeron, J.7
Borchers, C.8
Corthals, G.L.9
Costello, C.E.10
Deutsch, E.W.11
Domon, B.12
Hancock, W.13
He, F.14
Hochstrasser, D.15
Marko-Varga, G.16
Salekdeh, G.H.17
Sechi, S.18
Snyder, M.19
Srivastava, S.20
Uhlen, M.21
Hu, C.H.22
Yamamoto, T.23
Paik, Y.K.24
Omenn, G.S.25
more..
-
113
-
-
54049090766
-
Selected reaction monitoring for quantitative proteomics: A tutorial
-
V Lange, P Picotti, B Domon and R Aebersold: Selected reaction monitoring for quantitative proteomics: a tutorial. Mol Syst Biol, 4, 222 (2008).
-
(2008)
Mol Syst Biol
, vol.4
, pp. 222
-
-
Lange, V.1
Picotti, P.2
Domon, B.3
Aebersold, R.4
-
114
-
-
54049095667
-
A database of mass spectrometric assays for the yeast proteome
-
P Picotti, H Lam, D Campbell, EW Deutsch, H Mirzaei, J Ranish, B Domon and R Aebersold: A database of mass spectrometric assays for the yeast proteome. Nat Methods, 5(11), 913-4 (2008).
-
(2008)
Nat Methods
, vol.5
, Issue.11
, pp. 913-914
-
-
Picotti, P.1
Lam, H.2
Campbell, D.3
Deutsch, E.W.4
Mirzaei, H.5
Ranish, J.6
Domon, B.7
Aebersold, R.8
-
115
-
-
76549120193
-
The AC133 epitope, but not the CD133 protein, is lost upon cancer stem cell differentiation
-
K Kemper, MR Sprick, M de Bree, A Scopelliti, L Vermeulen, M Hoek, J Zeilstra, ST Pals, H Mehmet, G Stassi and JP Medema: The AC133 epitope, but not the CD133 protein, is lost upon cancer stem cell differentiation. Cancer Res, 70(2), 719-29 (2010).
-
(2010)
Cancer Res
, vol.70
, Issue.2
, pp. 719-729
-
-
Kemper, K.1
Sprick, M.R.2
De Bree, M.3
Scopelliti, A.4
Vermeulen, L.5
Hoek, M.6
Zeilstra, J.7
Pals, S.T.8
Mehmet, H.9
Stassi, G.10
Medema, J.P.11
-
117
-
-
0036535150
-
A sensitive and quantitative element-tagged immunoassay with ICPMS detection
-
DOI 10.1021/ac0110350
-
VI Baranov, Z Quinn, DR Bandura and SD Tanner: A sensitive and quantitative element-tagged immunoassay with ICPMS detection. Anal Chem, 74(7), 1629-36 (2002). (Pubitemid 34297602)
-
(2002)
Analytical Chemistry
, vol.74
, Issue.7
, pp. 1629-1636
-
-
Baranov, V.I.1
Quinn, Z.2
Bandura, D.R.3
Tanner, S.D.4
-
118
-
-
77956880326
-
Highly multiparametric analysis by mass cytometry
-
O Ornatsky, D Bandura, V Baranov, M Nitz, MA Winnik and S Tanner: Highly multiparametric analysis by mass cytometry. J Immunol Methods, 361(1-2), 1-20 (2010).
-
(2010)
J Immunol Methods
, vol.361
, Issue.1-2
, pp. 1-20
-
-
Ornatsky, O.1
Bandura, D.2
Baranov, V.3
Nitz, M.4
Winnik, M.A.5
Tanner, S.6
-
119
-
-
30844436779
-
Multiple cellular antigen detection by ICP-MS
-
DOI 10.1016/j.jim.2005.09.020, PII S0022175905003467
-
O Ornatsky, VI Baranov, DR Bandura, SD Tanner and J Dick: Multiple cellular antigen detection by ICP-MS. J Immunol Methods, 308(1-2), 68-76 (2006). (Pubitemid 43107955)
-
(2006)
Journal of Immunological Methods
, vol.308
, Issue.1-2
, pp. 68-76
-
-
Ornatsky, O.1
Baranov, V.I.2
Bandura, D.R.3
Tanner, S.D.4
Dick, J.5
-
120
-
-
57749111489
-
Flow cytometer with mass spectrometer detection for massively multiplexed singlecell biomarker assay
-
SD Tanner, DR Bandura, O Ornatsky, VI Baranov, M Nitz and MA Winnik: Flow cytometer with mass spectrometer detection for massively multiplexed singlecell biomarker assay. Pure Appl Chem, 80(12), 2627-2641 (2008).
-
(2008)
Pure Appl Chem
, vol.80
, Issue.12
, pp. 2627-2641
-
-
Tanner, S.D.1
Bandura, D.R.2
Ornatsky, O.3
Baranov, V.I.4
Nitz, M.5
Winnik, M.A.6
|