Intra- and interlaboratory reproducibility of ultra performance liquid chromatography-time-of-flight mass spectrometry for urinary metabolic profiling

Analytical Chemistry

Volumn 84, Issue 5, 2012, Pages 2424-2432

  Benton, H Paul ^a   Want, Elizabeth ^a   Keun, Hector C ^a   Amberg, Alexander ^b   Plumb, Robert S ^c   Goldfain Blanc, Francoise ^d   Walther, Bernhard ^d   Reily, Michael D ^e   Lindon, John C ^a   Holmes, Elaine ^a   Nicholson, Jeremy K ^a   Ebbels, Timothy M D ^a  

^a IMPERIAL COLLEGE LONDON   (United Kingdom)

^b SANOFI AVENTIS DEUTSCHLAND GMBH   (Germany)

^c WATERS CORPORATION   (United States)

^d INSTITUT DE RECHERCHES INTERNATIONALES SERVIER   (France)

^e BRISTOL MYERS SQUIBB   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADDUCT FORMATION; COEFFICIENTS OF VARIATIONS; DILUTION SERIES; HUMAN URINE; INTERLABORATORY REPRODUCIBILITY; IONIZATION MODES; LABORATORY SYSTEM; LINEAR RELATIONSHIPS; MASS ACCURACY; METABOLIC PROFILING; QUANTITATIVE DETECTION; REPRODUCIBILITIES; RETENTION TIME; STABLE ISOTOPES; TIME-OF-FLIGHT MS; URINARY METABOLITES;

BODY FLUIDS; IONIZATION; ISOTOPES; LIQUID CHROMATOGRAPHY; MASS SPECTROMETRY; METABOLISM; NEGATIVE IONS;

LABORATORIES;

ARTICLE; DIMERIZATION; ELECTROSPRAY MASS SPECTROMETRY; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HUMAN; ISOTOPE LABELING; METABOLOME; REPRODUCIBILITY; URINALYSIS;

CHROMATOGRAPHY, HIGH PRESSURE LIQUID; DIMERIZATION; HUMANS; ISOTOPE LABELING; METABOLOME; REPRODUCIBILITY OF RESULTS; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; URINALYSIS;

EID: 84857872088     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac203200x     Document Type: Article

References (26)

1. Holmes, E.; Wilson, I. D.; Nicholson, J. K. Cell 2008, 134, 714-717
2. Wilson, I. D.; Nicholson, J. K.; Castro-Perez, J.; Granger, J. H.; Johnson, K. A.; Smith, B. W.; Plumb, R. S. J. Proteome Res. 2005, 4, 591-598
3. Keun, H. C.; Ebbels, T. M.; Antti, H.; Bollard, M. E.; Beckonert, O.; Schlotterbeck, G.; Senn, H.; Niederhauser, U.; Holmes, E.; Lindon, J. C.; Nicholson, J. K. Chem. Res. Toxicol. 2002, 15, 1380-1386
4. Dumas, M. E.; Maibaum, E. C.; Teague, C.; Ueshima, H.; Zhou, B.; Lindon, J. C.; Nicholson, J. K.; Stamler, J.; Elliott, P.; Chan, Q.; Holmes, E. Anal. Chem. 2006, 78, 2199-2208
5. Ward, J. L.; Baker, J. M.; Miller, S. J.; Deborde, C.; Maucourt, M.; Biais, B.; Rolin, D.; Moing, A.; Moco, S.; Vervoort, J.; Lommen, A.; Schafer, H.; Humpfer, E.; Beale, M. H. Metabolomics 2010, 6, 263-273
6. Sangster, T.; Major, H.; Plumb, R.; Wilson, A. J.; Wilson, I. D. Analyst 2006, 131, 1075-1078
7. Sangster, T. P.; Wingate, J. E.; Burton, L.; Teichert, F.; Wilson, I. D. Rapid Commun. Mass Spectrom. 2007, 21, 2965-2970
8. Gika, H. G.; Macpherson, E.; Theodoridis, G. A.; Wilson, I. D. J. Chromatogr., B: Anal. Technol. Biomed. Life Sci. 2008, 871, 299-305
9. Gika, H. G.; Theodoridis, G. A.; Wingate, J. E.; Wilson, I. D. J. Proteome Res. 2007, 6, 3291-3303
10. Geier, F. M.; Want, E. J.; Leroi, A. M.; Bundy, J. G. Anal. Chem. 2011, 83, 3730-3736
11. Lindon, J. C.; Keun, H. C.; Ebbels, T. M.; Pearce, J. M.; Holmes, E.; Nicholson, J. K. Pharmacogenomics 2005, 6, 691-699
12. Coen, M.; Want, E. J.; Clayton, T. A.; Rhode, C. M.; Hong, Y. S.; Keun, H. C.; Cantor, G. H.; Metz, A. L.; Robertson, D. G.; Reily, M. D.; Holmes, E.; Lindon, J. C.; Nicholson, J. K. J. Proteome Res. 2009, 8, 5175-5187
13. Want, E. J.; Coen, M.; Masson, P.; Keun, H. C.; Pearce, J. T.; Reily, M. D.; Robertson, D. G.; Rohde, C. M.; Holmes, E.; Lindon, J. C.; Plumb, R. S.; Nicholson, J. K. Anal. Chem. 2010, 82, 5282-5289
14. Shipkova, P.; Vassallo, J. D.; Aranibar, N.; Hnatyshyn, S.; Zhang, H.; Clayton, T. A.; Cantor, G. H.; Sanders, M.; Coen, M.; Lindon, J. C.; Holmes, E.; Nicholson, J. K.; Lehman-McKeeman, L. Xenobiotica 2011, 41, 144-154
15. Smith, C. A.; Want, E. J.; OMaille, G.; Abagyan, R.; Siuzdak, G. Anal. Chem. 2006, 78, 779-787
16. Benton, H. P.; Want, E. J.; Ebbels, T. M. Bioinformatics 2010, 26, 2488-2489
17. Keller, B. O.; Sui, J.; Young, A. B.; Whittal, R. M. Anal. Chim. Acta 2008, 627, 71-81
18. Kuhl, C.; Tautenhahn, R.; Böttcher, C.; Larson, T. R.; Neumann, S. Anal. Chem. 2012, 84, 283-289.
19. Kind, T. http://fiehnlab.ucdavis.edu/staff/kind/Metabolomics/MS-Adduct- Calculator/. University of California Davis, Davis, CA, 2010.
20. Brenton, A. G.; Godfrey, A. R. J. Am. Soc. Mass Spectrom. 2010, 21, 1821-1835
21. Cech, N. B.; Enke, C. G. Mass Spectrom. Rev. 2001, 20, 362-387
22. Nordstrom, A.; Want, E.; Northen, T.; Lehtio, J.; Siuzdak, G. Anal. Chem. 2008, 80, 421-429
23. Pandher, R.; Ducruix, C.; Eccles, S. A.; Raynaud, F. I. J. Chromatogr., B 2009, 877, 1352-1358
24. Crews, B.; Wikoff, W. R.; Patti, G. J.; Woo, H. K.; Kalisiak, E.; Heideker, J.; Siuzdak, G. Anal. Chem. 2009, 81, 8538-8544
25. Masson, P.; Alves, A. C.; Ebbels, T. M.; Nicholson, J. K.; Want, E. J. Anal. Chem. 2010, 82, 7779-7786
26. Lange, E.; Tautenhahn, R.; Neumann, S.; Gropl, C. BMC Bioinf. 2008, 9, 375