메뉴 건너뛰기




Volumn 2, Issue 3, 2011, Pages 387-394

Bacillus subtilis mRNA decay: New parts in the toolkit

Author keywords

[No Author keywords available]

Indexed keywords

ENDONUCLEASE; EXONUCLEASE; MESSENGER RNA; RIBONUCLEASE; RIBONUCLEASE J1; RIBONUCLEASE J2; RIBONUCLEASE Y; UNCLASSIFIED DRUG; BACTERIAL RNA; EXORIBONUCLEASE;

EID: 84857770692     PISSN: 17577004     EISSN: 17577012     Source Type: Journal    
DOI: 10.1002/wrna.66     Document Type: Article
Times cited : (15)

References (35)
  • 3
    • 64049113602 scopus 로고    scopus 로고
    • Poly(A)-assisted RNA decay and modulators of RNA stability.
    • Regnier P, Hajnsdorf E. Poly(A)-assisted RNA decay and modulators of RNA stability. Prog Mol Biol Transl Sci 2009, 85:137-185.
    • (2009) Prog Mol Biol Transl Sci , vol.85 , pp. 137-185
    • Regnier, P.1    Hajnsdorf, E.2
  • 4
    • 34250875706 scopus 로고    scopus 로고
    • Initiation of RNA decay in Escherichia coli by 5′ pyrophosphate removal.
    • Celesnik H, Deana A, Belasco JG. Initiation of RNA decay in Escherichia coli by 5′ pyrophosphate removal. Mol Cell 2007, 27:79-90.
    • (2007) Mol Cell , vol.27 , pp. 79-90
    • Celesnik, H.1    Deana, A.2    Belasco, J.G.3
  • 5
    • 38349117689 scopus 로고    scopus 로고
    • The bacterial enzyme RppH triggers messenger RNA degradation by 5′ pyrophosphate removal.
    • Deana A, Celesnik H, Belasco JG. The bacterial enzyme RppH triggers messenger RNA degradation by 5′ pyrophosphate removal. Nature 2008, 451: 355-358.
    • (2008) Nature , vol.451 , pp. 355-358
    • Deana, A.1    Celesnik, H.2    Belasco, J.G.3
  • 6
    • 0037221712 scopus 로고    scopus 로고
    • Ectopic RNase E sites promote bypass of 5′-end-dependent mRNA decay in Escherichia coli.
    • Baker KE, Mackie GA. Ectopic RNase E sites promote bypass of 5′-end-dependent mRNA decay in Escherichia coli. Mol Microbiol 2003, 47:75-88.
    • (2003) Mol Microbiol , vol.47 , pp. 75-88
    • Baker, K.E.1    Mackie, G.A.2
  • 8
    • 0026334860 scopus 로고
    • Enzymatic basis for hydrolytic versus phosphorolytic mRNA degradation in Escherichia coli and Bacillus subtilis.
    • Deutscher MP, Reuven NB. Enzymatic basis for hydrolytic versus phosphorolytic mRNA degradation in Escherichia coli and Bacillus subtilis. Proc Natl Acad Sci U S A 1991, 88:3277-3280.
    • (1991) Proc Natl Acad Sci U S A , vol.88 , pp. 3277-3280
    • Deutscher, M.P.1    Reuven, N.B.2
  • 9
    • 16844379766 scopus 로고    scopus 로고
    • Participation of 3′-to-5′ exoribonucleases in the turnover of Bacillus subtilis mRNA.
    • Oussenko IA, Abe T, Ujiie H, Muto A, Bechhofer DH. Participation of 3′-to-5′ exoribonucleases in the turnover of Bacillus subtilis mRNA. J Bacteriol 2005, 187:2758-2767.
    • (2005) J Bacteriol , vol.187 , pp. 2758-2767
    • Oussenko, I.A.1    Abe, T.2    Ujiie, H.3    Muto, A.4    Bechhofer, D.H.5
  • 10
    • 17844361922 scopus 로고    scopus 로고
    • Ribonucleases J1 and J2: two novel endoribonucleases in B. subtilis with functional homology to E. coli RNase E.
    • Even S, Pellegrini O, Zig L, Labas V, Vinh J, Brechemmier-Baey D, Putzer H. Ribonucleases J1 and J2: two novel endoribonucleases in B. subtilis with functional homology to E. coli RNase E. Nucleic Acids Res 2005, 33:2141-2152.
    • (2005) Nucleic Acids Res , vol.33 , pp. 2141-2152
    • Even, S.1    Pellegrini, O.2    Zig, L.3    Labas, V.4    Vinh, J.5    Brechemmier-Baey, D.6    Putzer, H.7
  • 12
    • 64049109526 scopus 로고    scopus 로고
    • Messenger RNA decay and maturation in Bacillus subtilis.
    • Bechhofer DH. Messenger RNA decay and maturation in Bacillus subtilis. Prog Mol Biol Transl Sci 2009, 85:231-273.
    • (2009) Prog Mol Biol Transl Sci , vol.85 , pp. 231-273
    • Bechhofer, D.H.1
  • 14
    • 0026008229 scopus 로고
    • The Ams (altered mRNA stability) protein and ribonuclease E are encoded by the same structural gene of Escherichia coli.
    • Babitzke P, Kushner SR. The Ams (altered mRNA stability) protein and ribonuclease E are encoded by the same structural gene of Escherichia coli. Proc Natl Acad Sci U S A 1991, 88:1-5.
    • (1991) Proc Natl Acad Sci U S A , vol.88 , pp. 1-5
    • Babitzke, P.1    Kushner, S.R.2
  • 15
    • 51649091711 scopus 로고    scopus 로고
    • mRNA processing by RNases J1 and J2 affects Bacillus subtilis gene expression on a global scale.
    • Mader U, Zig L, Kretschmer J, Homuth G, Putzer H. mRNA processing by RNases J1 and J2 affects Bacillus subtilis gene expression on a global scale. Mol Microbiol 2008, 70:183-196.
    • (2008) Mol Microbiol , vol.70 , pp. 183-196
    • Mader, U.1    Zig, L.2    Kretschmer, J.3    Homuth, G.4    Putzer, H.5
  • 16
    • 77955412028 scopus 로고    scopus 로고
    • What is the role of RNase J in mRNA turnover?
    • Condon C. What is the role of RNase J in mRNA turnover? RNA Biol 2010, 7:1-6.
    • (2010) RNA Biol , vol.7 , pp. 1-6
    • Condon, C.1
  • 17
    • 34249101864 scopus 로고    scopus 로고
    • 5′-to-3′ exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5′ stability of mRNA.
    • Mathy N, Benard L, Pellegrini O, Daou R, Wen T, Condon C. 5′-to-3′ exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5′ stability of mRNA. Cell 2007, 129:681-692.
    • (2007) Cell , vol.129 , pp. 681-692
    • Mathy, N.1    Benard, L.2    Pellegrini, O.3    Daou, R.4    Wen, T.5    Condon, C.6
  • 18
    • 37249040135 scopus 로고    scopus 로고
    • Mechanism of mRNA destabilization by the glmS ribozyme.
    • Collins JA, Irnov I, Baker S, Winkler WC. Mechanism of mRNA destabilization by the glmS ribozyme. Genes Dev 2007, 21:3356-3368.
    • (2007) Genes Dev , vol.21 , pp. 3356-3368
    • Collins, J.A.1    Irnov, I.2    Baker, S.3    Winkler, W.C.4
  • 19
    • 62449224615 scopus 로고    scopus 로고
    • Ribosomes initiating translation of the hbs mRNA protect it from 5′-to-3′ exoribonucleolytic degradation by RNase J1.
    • Daou-Chabo R, Mathy N, Benard L, Condon C. Ribosomes initiating translation of the hbs mRNA protect it from 5′-to-3′ exoribonucleolytic degradation by RNase J1. Mol Microbiol 2009, 71:1538-1550.
    • (2009) Mol Microbiol , vol.71 , pp. 1538-1550
    • Daou-Chabo, R.1    Mathy, N.2    Benard, L.3    Condon, C.4
  • 20
    • 47749143603 scopus 로고    scopus 로고
    • Role of Bacillus subtilis RNase J1 endonuclease and 5′-exonuclease activities in trp leader RNA turnover.
    • Deikus G, Condon C, Bechhofer DH. Role of Bacillus subtilis RNase J1 endonuclease and 5′-exonuclease activities in trp leader RNA turnover. J Biol Chem 2008, 283:17158-17167.
    • (2008) J Biol Chem , vol.283 , pp. 17158-17167
    • Deikus, G.1    Condon, C.2    Bechhofer, D.H.3
  • 21
    • 70350374351 scopus 로고    scopus 로고
    • Bacillus subtilis trp leader RNA: RNase J1 endonuclease cleavage specificity and PNPase processing.
    • Deikus G, Bechhofer DH. Bacillus subtilis trp leader RNA: RNase J1 endonuclease cleavage specificity and PNPase processing. J Biol Chem 2009, 284:26394-26401.
    • (2009) J Biol Chem , vol.284 , pp. 26394-26401
    • Deikus, G.1    Bechhofer, D.H.2
  • 22
    • 34547112324 scopus 로고    scopus 로고
    • Initiation of decay of Bacillus subtilis trp leader RNA.
    • Deikus G, Bechhofer DH. Initiation of decay of Bacillus subtilis trp leader RNA. J Biol Chem 2007, 282:20238-20244.
    • (2007) J Biol Chem , vol.282 , pp. 20238-20244
    • Deikus, G.1    Bechhofer, D.H.2
  • 23
    • 62049085366 scopus 로고    scopus 로고
    • The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosome.
    • Schneider C, Leung E, Brown J, Tollervey D. The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosome. Nucleic Acids Res 2009, 37:1127-1140.
    • (2009) Nucleic Acids Res , vol.37 , pp. 1127-1140
    • Schneider, C.1    Leung, E.2    Brown, J.3    Tollervey, D.4
  • 24
    • 67649366350 scopus 로고    scopus 로고
    • RNase J1 endonuclease activity as a probe of RNA secondary structure.
    • Daou-Chabo R, Condon C. RNase J1 endonuclease activity as a probe of RNA secondary structure. RNA 2009, 15:1417-1425.
    • (2009) RNA , vol.15 , pp. 1417-1425
    • Daou-Chabo, R.1    Condon, C.2
  • 25
    • 0030047027 scopus 로고    scopus 로고
    • Polynucleotide phosphorylase is necessary for competence development in Bacillus subtilis.
    • Luttinger A, Hahn J, Dubnau D. Polynucleotide phosphorylase is necessary for competence development in Bacillus subtilis. Mol Microbiol 1996, 19:343-356.
    • (1996) Mol Microbiol , vol.19 , pp. 343-356
    • Luttinger, A.1    Hahn, J.2    Dubnau, D.3
  • 26
    • 67650147953 scopus 로고    scopus 로고
    • RNase J is involved in the 5′-end maturation of 16S rRNA and 23S rRNA in Sinorhizobium meliloti.
    • Madhugiri R, Evguenieva-Hackenberg E. RNase J is involved in the 5′-end maturation of 16S rRNA and 23S rRNA in Sinorhizobium meliloti. FEBS Lett 2009, 583:2339-2342.
    • (2009) FEBS Lett , vol.583 , pp. 2339-2342
    • Madhugiri, R.1    Evguenieva-Hackenberg, E.2
  • 27
    • 0032408864 scopus 로고    scopus 로고
    • The HD domain defines a new superfamily of metal-dependent phosphohydrolases.
    • Aravind L, Koonin EV. The HD domain defines a new superfamily of metal-dependent phosphohydrolases. Trends Biochem Sci 1998, 23:469-472.
    • (1998) Trends Biochem Sci , vol.23 , pp. 469-472
    • Aravind, L.1    Koonin, E.V.2
  • 28
    • 0037350114 scopus 로고    scopus 로고
    • Expression of the glycolytic gapA operon in Bacillus subtilis: differential syntheses of proteins encoded by the operon.
    • Meinken C, Blencke HM, Ludwig H, Stulke J. Expression of the glycolytic gapA operon in Bacillus subtilis: differential syntheses of proteins encoded by the operon. Microbiology 2003, 149(Pt 3):751-761.
    • (2003) Microbiology , vol.149 , Issue.PART 3 , pp. 751-761
    • Meinken, C.1    Blencke, H.M.2    Ludwig, H.3    Stulke, J.4
  • 30
    • 70450222923 scopus 로고    scopus 로고
    • RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis.
    • Shahbabian K, Jamalli A, Zig L, Putzer H. RNase Y, a novel endoribonuclease, initiates riboswitch turnover in Bacillus subtilis. EMBO J 2009, 28:3523-3533.
    • (2009) EMBO J , vol.28 , pp. 3523-3533
    • Shahbabian, K.1    Jamalli, A.2    Zig, L.3    Putzer, H.4
  • 31
    • 77954358026 scopus 로고    scopus 로고
    • Initiation of decay of Bacillus subtilis rpsO mRNA by endoribonuclease RNase Y.
    • Yao S, Bechhofer DH. Initiation of decay of Bacillus subtilis rpsO mRNA by endoribonuclease RNase Y. J Bacteriol 2010, 192:3279-3286.
    • (2010) J Bacteriol , vol.192 , pp. 3279-3286
    • Yao, S.1    Bechhofer, D.H.2
  • 32
    • 73249143537 scopus 로고    scopus 로고
    • Bacillus subtilis RNase J1 endonuclease and 5′ exonuclease activities in the turnover of DeltaermC mRNA.
    • Yao S, Sharp JS, Bechhofer DH. Bacillus subtilis RNase J1 endonuclease and 5′ exonuclease activities in the turnover of DeltaermC mRNA. RNA 2009, 15:2331-2339.
    • (2009) RNA , vol.15 , pp. 2331-2339
    • Yao, S.1    Sharp, J.S.2    Bechhofer, D.H.3
  • 33
    • 0032904686 scopus 로고    scopus 로고
    • Autogenous regulation of transcription termination factor Rho and the requirement for Nus factors in Bacillus subtilis.
    • Ingham CJ, Dennis J, Furneaux PA. Autogenous regulation of transcription termination factor Rho and the requirement for Nus factors in Bacillus subtilis. Mol Microbiol 1999, 31:651-663.
    • (1999) Mol Microbiol , vol.31 , pp. 651-663
    • Ingham, C.J.1    Dennis, J.2    Furneaux, P.A.3
  • 34
    • 0031009317 scopus 로고    scopus 로고
    • Polyadenylation of mRNA in prokaryotes.
    • Sarkar N. Polyadenylation of mRNA in prokaryotes. Annu Rev Biochem 1997, 66:173-197.
    • (1997) Annu Rev Biochem , vol.66 , pp. 173-197
    • Sarkar, N.1
  • 35
    • 77955351104 scopus 로고    scopus 로고
    • The RNA degradosome in Bacillus subtilis: identification of CshA as the major RNA helicase in the multiprotein complex.
    • Lehnik-Habrink M, Pfortner H, Rempeters L, Peitack N, Herzberg C, Stulke J. The RNA degradosome in Bacillus subtilis: identification of CshA as the major RNA helicase in the multiprotein complex. Mol Microbiol 2010, 77:958-971.
    • (2010) Mol Microbiol , vol.77 , pp. 958-971
    • Lehnik-Habrink, M.1    Pfortner, H.2    Rempeters, L.3    Peitack, N.4    Herzberg, C.5    Stulke, J.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.