Isolation and characterization of EstC, a new cold-active esterase from Streptomyces coelicolor A3(2)

PLoS ONE

Volumn 7, Issue 3, 2012, Pages

  Brault, Guillaume ^a   Shareck, François ^a   Hurtubise, Yves ^b   Lépine, François ^a   Doucet, Nicolas ^a  

^a UNIVERSITÉ LAVAL   (Canada)

^b Innu Science Canada Inc   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

4 NITROPHENYL ESTER; ESTER; HYBRID PROTEIN; PROTEIN ESTC; RECOMBINANT ENZYME; TRIACETIN; TRIBUTYRIN; UNCLASSIFIED DRUG; CARBOXYLESTERASE; ESTERASE; TRIACYLGLYCEROL LIPASE;

ARTICLE; BIOTECHNOLOGY; CATALYSIS; COLD ACCLIMATIZATION; CONTROLLED STUDY; ENZYME DENATURATION; ENZYME ISOLATION; ENZYME PURIFICATION; ENZYME SPECIFICITY; ENZYME STABILITY; ESCHERICHIA COLI; GENE IDENTIFICATION; MOLECULAR CLONING; MOLECULAR WEIGHT; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PROTEIN FUNCTION; PROTEIN PURIFICATION; SEQUENCE ALIGNMENT; STREPTOMYCES COELICOLOR; TEMPERATURE SENSITIVITY; AMINO ACID SEQUENCE; BACTERIAL GENE; CHEMISTRY; COLD; DNA SEQUENCE; ENZYMOLOGY; GENETICS; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; MOLECULAR GENETICS; PLASMID; SEQUENCE HOMOLOGY; TEMPERATURE;

STREPTOMYCES COELICOLOR;

AMINO ACID SEQUENCE; CARBOXYLIC ESTER HYDROLASES; COLD TEMPERATURE; ESCHERICHIA COLI; ESTERASES; ESTERS; GENES, BACTERIAL; HYDROGEN-ION CONCENTRATION; LIPASE; MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; PLASMIDS; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; STREPTOMYCES COELICOLOR; TEMPERATURE;

EID: 84857724022     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0032041     Document Type: Article

References (53)

1. Sharma D, Sharma B, Shukla AK, (2011) Biotechnological approach to microbial lipase: a review. Biotechnology 10: 23-40.
2. Sharma R, Chisti Y, Banerjee UC, (2001) Production, purification, characterization, and applications of lipases. Biotechnol Adv 19: 627-662.
3. Jaeger KE, Dijkstra BW, Reetz MT, (1999) Bacterial biocatalysts: molecular biology, three-dimensional structures, and biotechnological applications of lipases. Annu Rev Microbiol 53: 315-351.
4. Gupta R, Gupta N, Rathi P, (2004) Bacterial lipases: an overview of production, purification and biochemical properties. Appl Microbiol Biotechnol 64: 763-781.
5. Jaeger KE, Eggert T, (2002) Lipases for biotechnology. Curr Opin Biotechnol 13: 390-397.
6. Arpigny JL, Jaeger KE, (1999) Bacterial lipolytic enzymes: classification and properties. Biochem J 343: 177-183.
7. Verger R, (1997) "Interfacial activation" of lipases: facts and artifacts. Tibtech 15: 32-38.
8. Fojan P, Jonson PH, Petersen MT, Petersen SB, (2000) What distinguishes an esterase from a lipase: a novel structural approach. Biochimie 82: 1033-1041.
9. Uppenberg J, Hansen MT, Patkar S, Jones TA, (1994) The sequence crystal structure determination and refinements of two crystal forms of lipase B of Candida antarctica. Structure 15: 293-308.
10. Szatjer H, Maliszewska I, Wieczorek J, (1988) Production of exogenous lipases by bacteria, fungi and actinomycetes. Enzyme Microb Technol 10: 492-497.
11. Gandolfi R, Marinelli F, Lazzarini A, Molinari F, (2000) Cell-bound and extracellular carboxylesterases from Streptomyces: hydrolytic and synthetic activities. J Appl Microbiol 89: 870-875.
12. Large KP, Mirjalili M, Osborne M, Peacock LM, Zormpaidis V, et al. (1999) Lipase activity in streptomycetes. Enzyme Microb Technol 25: 569-575.
13. Sommer P, Bormann C, Gotz F, (1997) Genetic and biochemical characterization of a new extracellular lipase from Streptomyces cinnamomeus. Appl Environ Microbiol 63: 3553-3560.
14. Vujaklija D, Schroder W, Abramic M, Zou P, Lescic I, et al. (2002) A novel streptomycete lipase: cloning, sequencing and high-level expression of the Streptomyces rimosus GDS(L)-lipase gene. Arch Microbiol 178: 124-130.
15. Shim M, Kim W, Kim J, (1997) Neutral lipids and lipase activity for actinorhodin biosynthesis of Streptomyces coelicolor A3(2). Biotechnol Lett 19: 221-223.
16. Arabolaza A, Rodriguez E, Altabe S, Alvarez H, Gramajo H, (2008) Multiple pathways for triacylglycerol biosynthesis in Streptomyces coelicolor. Appl Environ Microbiol 74: 2573-2582.
17. Alvarez HM, Steinbuchel A, (2002) Triacylglycerols in prokaryotic microorganisms. Appl Microbiol Biotechnol 60: 367-376.
18. Popova NI, Krivova AY, Rastimeshina IO, Burtseva SA, (2005) Interrelation of the biosyntheses of lipids, lipoxygenase, and lipase in cultured streptomycetes. Microbiology 74: 717-719.
19. Olukoshi ER, Packter NM, (1994) Importance of stored triacylglycerols in Streptomyces: possible carbon source for antibiotics. Microbiology 140: 931-943.
20. Schauner C, Dary A, Lebrihi A, Leblond P, Decaris B, et al. (1999) Modulation of lipid metabolism and spiramycin biosynthesis in Streptomyces ambofaciens unstable mutants. Appl Environ Microbiol 65: 2730-2737.
21. Bielen A, Cetkovic H, Long PF, Schwab H, Abramic M, et al. (2009) The SGNH-hydrolase of Streptomyces coelicolor has (aryl)esterase and a true lipase activity. Biochimie 91: 390-400.
22. Bentley SD, Chater KF, Cerdeno-Tarraga AM, Challis GL, Thomson NR, et al. (2002) Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature 417: 141-147.
23. Soror SH, Verma V, Rao R, Rasool S, Koul S, et al. (2007) A cold-active esterase of Streptomyces coelicolor A3(2): from genome sequence to enzyme activity. J Ind Microbiol Biotechnol 34: 525-531.
24. Soror SH, Rao R, Cullum J, (2009) Mining the genome sequence for novel enzyme activity: characterisation of an unusual member of the hormone-sensitive lipase family of esterases from the genome of Streptomyces coelicolor A3 (2). Protein Eng Des Sel 22: 333-339.
25. Coté A, Shareck F, (2008) Cloning, purification and characterization of two lipases from Streptomyces coelicolor A3(2). Enzyme Microb Technol 42: 381-388.
26. Kieser T, Bibb MJ, Buttner MJ, Chater KF, Hopwood DA, (2000) Pratical Streptomyces genetics Norwich Foundation TJI.
27. Diaz P, Prim N, Javier Pastori FI, (1999) Direct fluorescence-based lipase activity assay. Biotechniques 27: 696-700.
28. Joseph B, Ramteke PW, Thomas G, (2008) Cold active microbial lipases: some hot issues and recent developments. Biotechnol Adv 26: 457-470.
29. Choo DW, Kurihara T, Suzuki T, Soda K, Esaki N, (1998) A cold-adapted lipase of an Alaskan psychrotroph, Pseudomonas sp. strain B11-1: gene cloning and enzyme purification and characterization. Appl Environ Microbiol 64: 486-491.
30. Rashid N, Shimada Y, Ezaki S, Atomi H, Imanaka T, (2001) Low-temperature lipase from psychrotrophic Pseudomonas sp. strain KB700A. Appl Environ Microbiol 67: 4064-4069.
31. Alquati C, Gioia LD, Santarossa G, Alberghina L, Fantucci P, et al. (2002) The cold-active lipase of Pseudomonas fragi: heterologous expression, biochemical characterization and molecular modeling. Eur J Biochem 269: 3321-3328.
32. Jeon JH, Kim JT, Kim YJ, Kim HY, Lee HS, et al. (2009) Cloning and characterization of a new cold-active lipase from a deep-sea sediment metagenome. Appl Microbiol Biotechnol 81: 865-874.
33. Para LP, Reyes F, Acevedo JP, Salazar O, Andrews BA, et al. (2008) Cloning and fusion expression of a cold-active lipase from marine Antarctic origin. Enzyme Microb Technol 42: 371-377.
34. Ryu HS, Kim HK, Choi WC, Kim MH, Park SY, et al. (2006) New cold-adapted lipase from Photobacterium lipolyticum sp. nov. that is closely related to filamentous fungal lipases. Appl Microbiol Biotechnol 70: 321-326.
35. Yang XX, Lin XZ, Fan TJ, Bian J, Huang XH, (2004) Cloning and expression of lipP, a gene encoding a cold-adapted lipase from Moritella sp. 2-5-10-1. Curr Microbiol 56: 194-198.
36. Zhang P, Zeng R, (2007) Cloning, expression, and characterization of a cold-adapted lipase gene from an Antarctic deep-sea psychrotrophic bacterium. J Microb Biotechnol 17: 604-610.
37. Ollis DL, Cheah E, Cygler M, Dijkstra B, Frolow F, et al. (1992) The alpha/beta hydrolase fold. Protein Eng 5: 197-211.
38. Xuezheng L, Shuoshuo C, Guoying X, Shuai W, Ning D, et al. (2010) Cloning and heterologous expression of two cold-active lipases from the Antarctic bacterium Psychrobacter sp. G. Polar Res 29: 421-429.
39. Roh C, Villatte F, (2008) Isolation of a low-temperature adapted lipolytic enzyme from uncultivated micro-organism. J Appl Microbiol 105: 116-123.
40. Kim HK, Jung Y, Choi W, Ryu HS, Oh T, et al. (2004) Sequence-based approach to finding functional lipases from microbial genome databases. FEMS Microbiol Lett 235: 349-355.
41. Zhang P, Zeng R, (2006) Cloning, expression, and characterization of a cold-adapted lipase gene from an Antarctic deep-sea psychrotrophic bacterium, Psychrobacter sp. 7195. J Microb Biotechnol 17: 604-610.
42. Mayordomo I, Randez-Gil F, Prieto JA, (2000) Isolation, purification, and characterization of a cold-active lipase from Aspergillus nidulans. J Agric Food Chem 48: 105-109.
43. Arpigny JL, Feller G, Gerday C, (1993) Cloning, sequence and structural features of a lipase from the antarctic facultative psychrophile Psychrobacter immobilis B10. Biochim Biophys Acta 1171: 331-333.
44. Lee MY, Dordick JS, (2002) Enzyme activation for nonaqueous media. Curr Opin Biotechnol 13: 376-384.
45. Lee HK, Ahn MJ, Kwak SH, Song WH, Jeong BC, (2003) Purification and characterization of cold active lipase from psychrotrophic Aeromonas LPB 4. J Microbiol 41: 22-27.
46. Klibanov AM, (2001) Improving enzymes by using them in organic solvents. Nature 409: 241-246.
47. Jaeger KE, Reetz MT, (1998) Microbial lipases form versatile tools for biotechnology. Trends Biotechnol 16: 396-403.
48. Kulakova L, Galkin A, Nakamaya T, Nishino T, Esaki N, (2004) Cold-active esterase from Psychrobacter sp. Ant300: gene cloning, characterization, and the effect of Gly→Pro substitution near the active site on its catalytic activity and stability. Biochim Biophys Acta 1696: 59-65.
49. De Santi C, Tutino ML, Mandrich L, Giuliani M, Parrilli E, et al. (2010) The hormone-sensitive lipase from Psychrobacter sp. TA144: new insight in the structural/functional characterization. Biochimie 92: 949-957.
50. Alvarez-Macarie E, Baratti J, (2000) Short chain flavour ester synthesis by a new esterase from Bacillus licheniformis. J Mol Catal B Enzym 10: 377-383.
51. Gao B, Su E, Lin J, Jiang Z, Ma Y, et al. (2009) Development of recombinant Escherichia coli whole-cell biocatalyst expressing a novel alkaline lipase-coding gene from Proteus sp. for biodiesel production. J Biotechnol 139: 169-75.
52. Notredame C, Higgins DG, Heringa J, (2000) T-Coffee: A novel method for fast and accurate multiple sequence alignment. J Mol Biol 302: 205-217.
53. Poirot O, O'Toole E, Notredame C, (2003) Tcoffee@igs: A web server for computing, evaluating and combining multiple sequence alignments. Nucleic Acids Res 31: 3503-3506.