Cloning, purification and characterization of two lipases from Streptomyces coelicolor A3(2)

Enzyme and Microbial Technology

Volumn 42, Issue 5, 2008, Pages 381-388

  Côté, Amélie ^a   Shareck, François ^a  

^a INRS INSTITUT ARMAND FRAPPIER   (Canada)

Author keywords

Lipases; Over expression; Streptomyces coelicolor

Indexed keywords

CLONING; ENZYME ACTIVITY; FATTY ACIDS; GENE EXPRESSION; SPECTROPHOTOMETRY;

CATALYTIC SITES; ENZYMATIC ASSAYS; GENOME MINING; INCUBATION MIXTURE; STREPTOMYCES COELICOLOR;

LIPASES;

BENZENE DERIVATIVE; BENZYLSULFONYL FLUORIDE; CALCIUM ION; COBALT; COPPER ION; DITHIOTHREITOL; ESTER DERIVATIVE; HYDROLASE; LONG CHAIN FATTY ACID; MAGNESIUM ION; PALMITIC ACID; SILVER; TRIACYLGLYCEROL LIPASE;

ALKALINITY; ARTICLE; ENZYMATIC ASSAY; ENZYME ACTIVE SITE; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME PURIFICATION; ENZYME STABILITY; GENE EXPRESSION; HYDROPHOBICITY; LIPOLYSIS; MOLECULAR CLONING; NONHUMAN; PH; STEREOSPECIFICITY; STREPTOMYCES COELICOLOR; THERMOSTABILITY; ULTRAVIOLET SPECTROPHOTOMETRY;

STREPTOMYCES; STREPTOMYCES COELICOLOR; STREPTOMYCES RIMOSUS;

EID: 40249111445     PISSN: 01410229     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.enzmictec.2008.01.009     Document Type: Article

References (39)

1. Vujaklija D., Schröder W., Abramic M., Zou P., Lescic I., Franke P., et al. A novel steptomycete lipase: cloning, sequencing and high-level expression of the Streptomyces rimosus GDS(L)-lipase gene. Arch Microbiol 178 (2002) 124-130
2. Bentley S.D., Chater K.F., Cerdeno-Tarraga A.M., Challis G.L., Thomson N.R., James K.D., et al. Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2). Nature 417 (2002) 141-147
3. Pandey A., Benjamen S., Soccol C.R., Nigam P., Krieger N., and Soccol V.T. The realm of microbial lipases in biotechnology. Biotechnol Appl Biochem 29 (1999) 119-131
4. Thomson C.A., Delaquis P.J., and Mazza G. Detection and measurement of microbial lipase activity: a review. Critical Rev Food Sci Nutr 39 (1999) 165-187
5. Arpigny J.L., and Jaeger K.E. Bacterial lipolytic enzymes: classification and properties. Biochem J 343 (1999) 177-183
6. Fojan P., Jonson P.H., Peterson M.T.N., and Peterson S.B. What distinguishes an esterase from a lipase: a novel structural approach. Biochimie 82 (2000) 1033-1041
7. Jaeger K.E., Dijkstra B.W., and Reetz M.T. Bacterial biocatalysts: molecular biology, three-dimensional structures, and biotechnological applications of lipases. Annu Rev Microbiol 53 (1999) 315-351
8. Sulzenbacher G., Shareck F., Morosoli R., Dupont C., and Davies G.J. The Streptomyces lividans family 12 endoglucanase: construction of the catalytic core, expression, and X-ray structure at 1.75 Å resolution. Biochemistry 36 (1997) 16032-16039
9. Katz E., Thompson C.J., and Hopwood D.A. Cloning and expression of the tyrosinase gene from Streptomyces antibioticus in Streptomyces lividans. J Gen Microbiol 129 (1983) 2703-2714
10. Mondou F., Shareck F., Morosoli R., and Kluepfel D. Cloning of the xylanase gene of Streptomyces lividans. Gene 49 (1986) 323-329
11. Hurtubise Y., Shareck F., Kluepfel D., and Morosoli R. A cellulase/xylanase-negative mutant of Streptomyces lividans 1326 defective in cellobiose and xylobiose uptake is mutated in a gene encoding a protein homologous to ATP-binding proteins. Mol Microbiol 17 (1995) 367-377
12. Choo D.W., Kurihara T., Suzuki T., Soda K., and Esaki N. A cold-adapted lipase of an Alaskan psychrotroph, Pseudomonas sp. strain B11-1: gene cloning and enzyme purification and characterization. Appl Environ Microbiol 64 (1998) 486-491
13. Henne A., Schmitz R.A., Bömeke M., Gottschalk G., and Daniel R. Screening of environmental DNA libraries for the presence of genes conferring lipolytic activity in Escherichia coli. Appl Environ Microbiol 66 (2000) 3113-3116
14. Plou F.J., Ferrer M., Nuero O.M., Calvo M.V., Alcalde M., Reyes F., et al. Analysis of Tween 80 as an esterase/lipase substrate for lypolytic activity assay. Biotechnol Tech 12 (1998) 183-186
15. Prim N., Sànchez M., Ruiz C., Javier Pastor F.I., and Diaz P. Use of methylumbelyferyl-derivative substrates for lipase activity characterization. J Mol Catal B 22 (2003) 339-346
16. Diaz P., Prim N., and Javier Pastor F.I. Direct fluorescence-based lipase activity assay. Biotechniques 27 (1999) 696-700
17. Ruiz C., Pastor J., and Diaz P. Isolation and characterization of Bacillus sp. BP-6 LipA, a ubiquitous lipase among mesophilic Bacillus species. Lett Appl Microbiol 37 (2003) 354-359
18. Deb C., Daniel J., Sirakova T.D., Abomoelak B., Dubey V.S., and Kolattukudy P.E. A novel lipase belonging to the hormone sensitive lipase family induced under starvation to utilize stored triacylglycerol in Mycobacterium tuberculosis. J Biol Chem 281 (2006) 3866-3875
19. Motilva M.J., Toldrà F., and Flores J. Assay of lipase and esterase activities in fresh pork meat and dry-cured ham. Z Lebensm Unters Forsch 195 (1992) 446-450
20. Nawani N., Dosanjh N.S., and Kaur J. A novel thermostable lipase from a thermophilic Bacillus sp.: characterization and esterification studies. Biotechnol Lett 20 (1998) 997-1000
21. Bengtsson G., and Olivecrona T. Lipoprotein lipase: some effects of activator proteins. Eur J Biochem 106 (1980) 549-555
22. Sharon C., Nakazato M., Ogawa H.I., and Kato Y. Lipase-induced hydrolysis of castor oil: effect of various metals. J Ind Microbiol Biotechnol 21 (1998) 292-295
23. Gupta R., Rathi P., Gupta N., and Bradoo S. Lipase assays for conventional and molecular screening: an overview. Biotechnol Appl Biochem 37 (2003) 63-71
24. Snellman E.A., Sullivan E.R., and Colwell R.R. Purification and properties of the extracellular lipase, LipA, of Acinetobacter sp. RAG-1. Eur J Biochem 269 (2002) 5771-5779
25. Abramic M., Lescic I., Korica T., Vitale L., Saenger W., and Pigac J. Purification and properties of extracellular lipase from Streptomyces rimosus. Enzyme Microbial Technol 25 (1999) 522-529
26. Liebeton K., Zacharias A., and Jaeger K.E. Disulfide bond in Pseudomonas aeruginosa lipase stabilize the structure but is not required for interaction with its foldase. J Bacteriol 183 (2001) 597-603
27. El Khattabi M., Van Gelder P., Bitter W., and Tommassen J. Role of the calcium ion and the disulfide bond in the Burkholderia glumae lipase. J Mol Catal B 22 (2003) 329-338
28. Jääskeläinen S., Verma C.S., Hubbard R.E., Linko P., and Caves L.S.D. Conformational change in the activation of lipase: an analysis in terms of low-frequency normal modes. Prot Sci 7 (1998) 1359-1367
29. Cherukuvada S.L., Seshasayee A.S.N., Raghunathan K., Anishetty S., and Pennathur G. Evidence of a double-lid movement in Pseudomonas aeruginosa lipase: insights from molecular dynamics simulations. PLoS Comp Biol 1 (2005) e28
30. Brocca S., Secundo F., Ossola M., Alberghina L., Carrea G., and Lotti M. Sequence of the lid affects activity and specificity of Candida rugosa lipase isoenzymes. Prot Sci 12 (2003) 2312-2319
31. Martinelle M., Holmquist M., Clausen I.G., Patkar S., Svendsen A., and Hult K. The role of Glu87 and Trp89 in the lid of Humicola lanuginosa lipase. Prot Eng 9 (1996) 519-524
32. Lesuisse E., Schanck K., and Colson C. Purification and preliminary characterization of the extracellular lipase of Bacillus subtilis 168, an extremely basic pH-tolerant enzyme. Eur J Biochem 216 (1993) 155-160
33. Berger R., Hoffmann M., and Keller U. Molecular analysis of a gene encoding a cell-bound esterase from Streptomyces chrysomallus. J Bacteriol 180 (1998) 6396-6399
34. Pouderoyen G.V., Eggert T., and Jaeger K.E. The crystal structure of Bacillus subtilis lipase: a minimal α/β hydrolase fold enzyme. J Mol Biol 309 (2001) 215-226
35. Derewenda U., Swenson L., Wei Y., Green R., Kobos P.M., Joerger R., et al. Conformational lability of lipases observed in the absence of an oil-water interface: crystallographic studies of enzymes from the fungi Humicola lanuginosa and Rhizopus delemar. J Lip Res 35 (1994) 524-534
36. Kim K.K., Song H.K., Shin D.H., Hwang K.Y., and Suh S.W. The crystal structure of a triacylglycerol lipase from Pseudomonas cepacia reveals a highly open conformation in the absence of a bound inhibitor. Structure 5 (1997) 173-185
37. Nardini M., Lang D.A., Liebeton K., Jaeger K.E., and Dijkstra B. Crystal structure of Pseudomonas aeruginosa lipase in the open conformation. J Biol Chem 275 (2000) 31219-31225
38. Yang J., Kobayashi K., Iwasaki Y., Nakano H., and Yamane T. In vitro analysis of a disulfide bridge and a calcium binding site in activation of Pseudomonas sp. strain KWI-56 lipase. J Bacteriol 182 (2000) 295-302
39. Akoh C.C., Lee G.C., Liaw Y.C., Huang T.H., and Shaw J.F. GDSL family of serine esterases/lipases. Prog Lip Res 43 (2004) 534-552