Induction of biogenic magnetization and redox control by a component of the target of rapamycin complex 1 signaling pathway

PLoS Biology

Volumn 10, Issue 2, 2012, Pages

  Nishida, Keiji ^a   Silver, Pamela A ^a  

^a HARVARD MEDICAL SCHOOL   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

FERRIC CITRATE; FERRITIN; MAMMALIAN TARGET OF RAPAMYCIN COMPLEX 1; CATION TRANSPORT PROTEIN; CCC1 PROTEIN, S CEREVISIAE; FERRIC ION; FRATAXIN; IRON BINDING PROTEIN; MITOCHONDRIAL PROTEIN; NICOTINAMIDE ADENINE DINUCLEOTIDE PHOSPHATE; PHOSPHOTRANSFERASE; POS5 PROTEIN, S CEREVISIAE; PROTEIN SERINE THREONINE KINASE; RECOMBINANT PROTEIN; SACCHAROMYCES CEREVISIAE PROTEIN; SNF1 RELATED PROTEIN KINASES; SNF1-RELATED PROTEIN KINASES; TCO89 PROTEIN, S CEREVISIAE; TORC1 PROTEIN COMPLEX, S CEREVISIAE; TRANSCRIPTION FACTOR;

ARTICLE; BIOMAGNETISM; CARBON BALANCE; CARBON METABOLISM; CELL GROWTH; CELL SHAPE; CELL SIZE; CELL TYPE; CELL VACUOLE; CONTROLLED STUDY; CYTOSOL; DNA MODIFICATION; FUNGUS GROWTH; HOMEOSTASIS; NITROGEN BALANCE; NONHUMAN; OXIDATION; OXIDATION REDUCTION STATE; PROTEIN EXPRESSION; SACCHAROMYCES CEREVISIAE; YEAST CELL; BIOSYNTHESIS; ENZYMOLOGY; GENE DOSAGE; GENE INACTIVATION; GENETICS; HUMAN; MAGNETISM; MAGNETOMETRY; METABOLISM; MITOCHONDRION; OXIDATION REDUCTION REACTION; TRANSGENIC ORGANISM; ULTRASTRUCTURE;

ANIMALIA; SACCHAROMYCES CEREVISIAE;

CATION TRANSPORT PROTEINS; FERRIC COMPOUNDS; FERRITINS; GENE DOSAGE; GENE KNOCKOUT TECHNIQUES; HUMANS; IRON-BINDING PROTEINS; MAGNETIC PHENOMENA; MAGNETOMETRY; MITOCHONDRIA; MITOCHONDRIAL PROTEINS; NADP; ORGANISMS, GENETICALLY MODIFIED; OXIDATION-REDUCTION; PHOSPHOTRANSFERASES (ALCOHOL GROUP ACCEPTOR); PROTEIN-SERINE-THREONINE KINASES; RECOMBINANT PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TRANSCRIPTION FACTORS;

EID: 84857465383     PISSN: 15449173     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.1001269     Document Type: Article

References (44)

1. Balkwill D. L, Maratea D, Blakemore R. P, (1980) Ultrastructure of a magnetotactic spirillum. J Bacteriol 141: 1399-1408.
2. Jogler C, Schüler D, (2009) Genomics, genetics, and cell biology of magnetosome formation. Annu Rev Microbiol 63: 501-521.
3. Frankel R. B, Bazylinski D. A, (2009) Magnetosomes and magneto-aerotaxis. Contrib Microbiol 16: 182-193.
4. Murat D, Quinlan A, Vali H, Komeili A, (2010) Comprehensive genetic dissection of the magnetosome gene island reveals the step-wise assembly of a prokaryotic organelle. Proc Natl Acad Sci U S A 107: 5593-5598.
5. Matsunaga T, Nakamura C, Burgess J. G, Sode K, (1992) Gene transfer in magnetic bacteria: transposon mutagenesis and cloning of genomic DNA fragments required for magnetosome synthesis. J Bacteriol 174: 2748-2753.
6. Zurkiya O, Chan A. W, Hu X, (2008) MagA is sufficient for producing magnetic nanoparticles in mammalian cells, making it an MRI reporter. Magn Reson Med 59: 1225-1231.
7. Goldhawk D. E, Lemaire C, McCreary C. R, McGirr R, Dhanvantari S, et al. (2009) Magnetic resonance imaging of cells overexpressing MagA, an endogenous contrast agent for live cell imaging. Mol Imaging 8: 129-139.
8. Nakamura C, Burgess J. G, Sode K, Matsunaga T, (1995) An iron-regulated gene, magA, encoding an iron transport protein of Magnetospirillum sp. strain AMB-1. J Biol Chem 270: 28392-28396.
9. Nakamura C, Kikuchi T, Burgess J. G, Matsunaga T, (1995) Iron-regulated expression and membrane localization of the magA protein in Magnetospirillum sp. strain AMB-1. J Biochem 118: 23-27.
10. Lefèvre C. T, Viloria N, Schmidt M. L, Pósfai M, Frankel R. B, et al. (2011) Novel magnetite-producing magnetotactic bacteria belonging to the Gammaproteobacteria. ISME J in press.
11. Glasauer S, Langley S, Beveridge T. J, (2002) Intracellular iron minerals in a dissimilatory iron-reducing bacterium. Science 295: 117-119.
12. Vainstein M, Suzina N, Sorokin V, (1997) A new type of magnet-sensitive inclusions in cells of photosynthetic purple bacteria. System Appl Microbiol: Gustav Fischer Verlag pp. 182-186.
13. Schumann D, Raub T. D, Kopp R. E, Guerquin-Kern J. L, Wu T. D, et al. (2008) Gigantism in unique biogenic magnetite at the Paleocene-Eocene Thermal Maximum. Proc Natl Acad Sci U S A 105: 17648-17653.
14. Wiltschko R, Wiltschko W, (2006) Magnetoreception. Bioessays 28: 157-168.
15. Dobson J, (2004) Magnetic iron compounds in neurological disorders. Ann N Y Acad Sci 1012: 183-192.
16. McNeill A, Chinnery P. F, (2011) Neurodegeneration with brain iron accumulation. Handb Clin Neurol 100: 161-172.
17. Duce J. A, Tsatsanis A, Cater M. A, James S. A, Robb E, et al. (2010) Iron-export ferroxidase activity of β-amyloid precursor protein is inhibited by zinc in Alzheimer's disease. Cell 142: 857-867.
18. Bou-Abdallah F, (2010) The iron redox and hydrolysis chemistry of the ferritins. Biochim Biophys Acta 1800: 719-731.
19. Curtis A. R, Fey C, Morris C. M, Bindoff L. A, Ince P. G, et al. (2001) Mutation in the gene encoding ferritin light polypeptide causes dominant adult-onset basal ganglia disease. Nat Genet 28: 350-354.
20. Meldrum F. C, Heywood B. R, Mann S, (1992) Magnetoferritin: in vitro synthesis of a novel magnetic protein. Science 257: 522-523.
21. Li L, Chen O. S, McVey Ward D, Kaplan J, (2001) CCC1 is a transporter that mediates vacuolar iron storage in yeast. J Biol Chem 276: 29515-29519.
22. Shi H, Bencze K. Z, Stemmler T. L, Philpott C. C, (2008) A cytosolic iron chaperone that delivers iron to ferritin. Science 320: 1207-1210.
23. Michaelis L, (1947) Ferritin and apoferritin. Adv Protein Chem 3: 53-66.
24. Zborowski M, Fuh C. B, Green R, Sun L, Chalmers J. J, (1995) Analytical magnetapheresis of ferritin-labeled lymphocytes. Anal Chem 67: 3702-3712.
25. Reinke A, Anderson S, McCaffery J. M, Yates J, Aronova S, et al. (2004) TOR complex 1 includes a novel component, Tco89p (YPL180w), and cooperates with Ssd1p to maintain cellular integrity in Saccharomyces cerevisiae. J Biol Chem 279: 14752-14762.
26. Martin D. E, Hall M. N, (2005) The expanding TOR signaling network. Curr Opin Cell Biol 17: 158-166.
27. Wullschleger S, Loewith R, Hall M. N, (2006) TOR signaling in growth and metabolism. Cell 124: 471-484.
28. Babcock M, de Silva D, Oaks R, Davis-Kaplan S, Jiralerspong S, et al. (1997) Regulation of mitochondrial iron accumulation by Yfh1p, a putative homolog of frataxin. Science 276: 1709-1712.
29. Foury F, Cazzalini O, (1997) Deletion of the yeast homologue of the human gene associated with Friedreich's ataxia elicits iron accumulation in mitochondria. FEBS Lett 411: 373-377.
30. Campuzano V, Montermini L, Moltò M. D, Pianese L, Cossée M, et al. (1996) Friedreich's ataxia: autosomal recessive disease caused by an intronic GAA triplet repeat expansion. Science 271: 1423-1427.
31. Sanz P, (2003) Snf1 protein kinase: a key player in the response to cellular stress in yeast. Biochem Soc Trans 31: 178-181.
32. Nogae I, Johnston M, (1990) Isolation and characterization of the ZWF1 gene of Saccharomyces cerevisiae, encoding glucose-6-phosphate dehydrogenase. Gene 96: 161-169.
33. Dubbels B. L, DiSpirito A. A, Morton J. D, Semrau J. D, Neto J. N, et al. (2004) Evidence for a copper-dependent iron transport system in the marine, magnetotactic bacterium strain MV-1. Microbiology 150: 2931-2945.
34. Kopps E. R, Joseph K. L, (2008) The identification and biogeochemical interpretation of fossil magnetotactic bacteria. Earth-Science Reviews 86: 42-61.
35. Dames S. A, Mulet J. M, Rathgeb-Szabo K, Hall M. N, Grzesiek S, (2005) The solution structure of the FATC domain of the protein kinase target of rapamycin suggests a role for redox-dependent structural and cellular stability. J Biol Chem 280: 20558-20564.
36. Sarbassov D. D, Sabatini D. M, (2005) Redox regulation of the nutrient-sensitive raptor-mTOR pathway and complex. J Biol Chem 280: 39505-39509.
37. Garber Morales J, Holmes-Hampton G. P, Miao R, Guo Y, Münck E, et al. (2010) Biophysical characterization of iron in mitochondria isolated from respiring and fermenting yeast. Biochemistry 49: 5436-5444.
38. Holmes-Hampton G. P, Miao R, Garber Morales J, Guo Y, Münck E, et al. (2010) A nonheme high-spin ferrous pool in mitochondria isolated from fermenting Saccharomyces cerevisiae. Biochemistry 49: 4227-4234.
39. Knight T, (2003) Idempotent vector design for standard assembly of biobricks. MIT Artificial Intelligence Laboratory: MIT Synthetic Biology Working Group.
40. Phillips I, Silver P, (2006) A new biobrick assembly strategy designed for facile protein engineering. MIT Artificial Intelligence Laboratory; MIT Synthetic Biology Working Group.
41. Sikorski R. S, Hieter P, (1989) A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122: 19-27.
42. Winzeler E. A. W, Shoemaker D. D, Astromoff A, Liang H, Anderson K, et al. (1999) Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis. Science 285: 901-906.
43. Ito S, Karnovsky M, (1968) Formaldehyde-glutaraldehyde fixative containing trinitro compounds. J Cell Biol: The Rockerfeller University Press pp. 168a-169a.
44. Spurr A. R, (1969) A low-viscosity epoxy resin embedding medium for electron microscopy. J Ultrastruct Res 26: 31-43.