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Volumn 7, Issue 2, 2012, Pages

Recognition of anesthetic barbiturates by a protein binding site: A high resolution structural analysis

Author keywords

[No Author keywords available]

Indexed keywords

APOFERRITIN; BARBITURIC ACID DERIVATIVE; PENTOBARBITAL; PHENOBARBITAL; PROPOFOL; THIOPENTAL; ANESTHETIC AGENT;

EID: 84857136424     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0032070     Document Type: Article
Times cited : (12)

References (45)
  • 1
    • 0000655837 scopus 로고    scopus 로고
    • Promiscuous ligands and attractive cavities: How do the inhaled anesthetics work?
    • Eckenhoff RG, (2001) Promiscuous ligands and attractive cavities: How do the inhaled anesthetics work? Mol Interventions 1: 258-268.
    • (2001) Mol Interventions , vol.1 , pp. 258-268
    • Eckenhoff, R.G.1
  • 2
    • 52049101190 scopus 로고    scopus 로고
    • Identification of binding sites in the nicotinic acetylcholine receptor for TDBzl-etomidate, a photoreactive positive allosteric effector
    • Nirthanan S, Garcia G 3rd, Chiara DC, Husain SS, Cohen JB, (2008) Identification of binding sites in the nicotinic acetylcholine receptor for TDBzl-etomidate, a photoreactive positive allosteric effector. J Biol Chem 283: 22051-22062.
    • (2008) J Biol Chem , vol.283 , pp. 22051-22062
    • Nirthanan, S.1    Garcia 3rd, G.2    Chiara, D.C.3    Husain, S.S.4    Cohen, J.B.5
  • 3
    • 42349089480 scopus 로고    scopus 로고
    • General anesthesia: From molecular targets to neuronal pathways of sleep and arousal
    • Franks NP, (2008) General anesthesia: From molecular targets to neuronal pathways of sleep and arousal. Nature Reviews Neuroscience 9: 370-386.
    • (2008) Nature Reviews Neuroscience , vol.9 , pp. 370-386
    • Franks, N.P.1
  • 4
    • 77953184889 scopus 로고    scopus 로고
    • Motoneuronal TASK channels contribute to immobilizing effects of inhalational general anesthetics
    • Lazarenko RM, Willcox SC, Shu S, Berg AP, Jevtovic-Todorovic V, et al. (2010) Motoneuronal TASK channels contribute to immobilizing effects of inhalational general anesthetics. J Neurosci 30: 7691-7704.
    • (2010) J Neurosci , vol.30 , pp. 7691-7704
    • Lazarenko, R.M.1    Willcox, S.C.2    Shu, S.3    Berg, A.P.4    Jevtovic-Todorovic, V.5
  • 5
    • 33747174906 scopus 로고    scopus 로고
    • Mitochondrial complex I function modulates volatile anesthetic sensitivity in C. elegans
    • Falk MJ, Kayser EB, Morgan PG, Sedensky MM, (2006) Mitochondrial complex I function modulates volatile anesthetic sensitivity in C. elegans. Curr Biol 16: 1641-1645.
    • (2006) Curr Biol , vol.16 , pp. 1641-1645
    • Falk, M.J.1    Kayser, E.B.2    Morgan, P.G.3    Sedensky, M.M.4
  • 6
    • 63849195108 scopus 로고    scopus 로고
    • GABA-induced intersubunit conformational movement in the GABAA receptor alpha 1M1-beta 2M3 transmembrane subunit interface: experimental basis for homology modeling of an intravenous anesthetic binding site
    • Bali M, Jansen M, Akabas MH, (2009) GABA-induced intersubunit conformational movement in the GABAA receptor alpha 1M1-beta 2M3 transmembrane subunit interface: experimental basis for homology modeling of an intravenous anesthetic binding site. J Neurosci 29: 3083-3092.
    • (2009) J Neurosci , vol.29 , pp. 3083-3092
    • Bali, M.1    Jansen, M.2    Akabas, M.H.3
  • 7
    • 0242353360 scopus 로고    scopus 로고
    • A single M1 residue in the β2 subunit alters channel gating of GABAA receptor in anesthetic modulation and direct activation
    • Chang CS, Olcese R, Olsen RW, (2003) A single M1 residue in the β2 subunit alters channel gating of GABAA receptor in anesthetic modulation and direct activation. J Biol Chem 278: 42821-42828.
    • (2003) J Biol Chem , vol.278 , pp. 42821-42828
    • Chang, C.S.1    Olcese, R.2    Olsen, R.W.3
  • 8
    • 0036754362 scopus 로고    scopus 로고
    • Tryptophan scanning mutagenesis in TM4 of the GABAA receptor α1 subunit: implications for modulation by inhaled anesthetics and ion channel structure
    • Jenkins A, Andreasen A, Trudell JR, Harrison NL, (2002) Tryptophan scanning mutagenesis in TM4 of the GABAA receptor α1 subunit: implications for modulation by inhaled anesthetics and ion channel structure. Neuropharm 43: 669-678.
    • (2002) Neuropharm , vol.43 , pp. 669-678
    • Jenkins, A.1    Andreasen, A.2    Trudell, J.R.3    Harrison, N.L.4
  • 9
    • 0037315741 scopus 로고    scopus 로고
    • General anesthetic actions in vivo strongly attenuated by a point mutation in the GABAA receptor β3 subunit
    • Jurd R, Arras M, Sachar L, Drexler B, Siegwart R, et al. (2003) General anesthetic actions in vivo strongly attenuated by a point mutation in the GABAA receptor β3 subunit. FASEB J 17: 250-252.
    • (2003) FASEB J , vol.17 , pp. 250-252
    • Jurd, R.1    Arras, M.2    Sachar, L.3    Drexler, B.4    Siegwart, R.5
  • 10
    • 0035669073 scopus 로고    scopus 로고
    • Methionine 286 in transmembrane domain 3 of the GABAA receptor β subunit controls a binding cavity for propofol and other alkylphenol general anesthetics
    • Krasowski MD, Nishikawa K, Nikolaeva N, Lin A, Harrison NL, (2001) Methionine 286 in transmembrane domain 3 of the GABAA receptor β subunit controls a binding cavity for propofol and other alkylphenol general anesthetics. Neuropharm 41: 952-964.
    • (2001) Neuropharm , vol.41 , pp. 952-964
    • Krasowski, M.D.1    Nishikawa, K.2    Nikolaeva, N.3    Lin, A.4    Harrison, N.L.5
  • 11
    • 33751119897 scopus 로고    scopus 로고
    • Identification of a GABAA receptor anesthetic binding site at subunit interfaces by photolabeling with an etomidate analog
    • Li G-D, Chiara DC, Sawyer GW, Husain SS, Olsen RW, et al. (2006) Identification of a GABAA receptor anesthetic binding site at subunit interfaces by photolabeling with an etomidate analog. J Neurosci 26: 11599-11605.
    • (2006) J Neurosci , vol.26 , pp. 11599-11605
    • Li, G.-D.1    Chiara, D.C.2    Sawyer, G.W.3    Husain, S.S.4    Olsen, R.W.5
  • 12
    • 79951721809 scopus 로고    scopus 로고
    • GABA(A) receptors as molecular targets of general anesthetics: identification of binding sites provides clues to allosteric modulation
    • Olsen RW, Li GD, (2011) GABA(A) receptors as molecular targets of general anesthetics: identification of binding sites provides clues to allosteric modulation. Can J Anaesth 58: 206-215.
    • (2011) Can J Anaesth , vol.58 , pp. 206-215
    • Olsen, R.W.1    Li, G.D.2
  • 13
    • 12844271188 scopus 로고    scopus 로고
    • Transmembrane residues define the action of isoflurane at the GABAA receptor alpha-3 subunit
    • Schofield CM, Harrison NL, (2005) Transmembrane residues define the action of isoflurane at the GABAA receptor alpha-3 subunit. Brain Res 1032: 30-35.
    • (2005) Brain Res , vol.1032 , pp. 30-35
    • Schofield, C.M.1    Harrison, N.L.2
  • 14
    • 77955981821 scopus 로고    scopus 로고
    • Unlocking the eukaryotic membrane protein structural proteome
    • Lee JK, Stroud RM, (2011) Unlocking the eukaryotic membrane protein structural proteome. Curr Opin Struct Biol 20: 464-470.
    • (2011) Curr Opin Struct Biol , vol.20 , pp. 464-470
    • Lee, J.K.1    Stroud, R.M.2
  • 15
    • 0034624021 scopus 로고    scopus 로고
    • Binding of the general anesthetics propofol and halothane to human serum albumin. High resolution crystal structures
    • Bhattacharya AA, Curry S, Franks NP, (2000) Binding of the general anesthetics propofol and halothane to human serum albumin. High resolution crystal structures. Journal of Biological Chemistry 275: 38731-38738.
    • (2000) Journal of Biological Chemistry , vol.275 , pp. 38731-38738
    • Bhattacharya, A.A.1    Curry, S.2    Franks, N.P.3
  • 16
    • 0021211620 scopus 로고
    • Do general anaesthetics act by competitive binding to specific receptors?
    • Franks NP, Lieb WR, (1984) Do general anaesthetics act by competitive binding to specific receptors? Nature 310: 599-601.
    • (1984) Nature , vol.310 , pp. 599-601
    • Franks, N.P.1    Lieb, W.R.2
  • 17
    • 44849083478 scopus 로고    scopus 로고
    • Four-alpha-helix bundle with designed anesthetic binding pockets. Part I: structural and dynamical analyses
    • Ma D, Brandon NR, Cui T, Bondarenko V, Canlas C, et al. (2008) Four-alpha-helix bundle with designed anesthetic binding pockets. Part I: structural and dynamical analyses. Biophys J 94: 4454-4463.
    • (2008) Biophys J , vol.94 , pp. 4454-4463
    • Ma, D.1    Brandon, N.R.2    Cui, T.3    Bondarenko, V.4    Canlas, C.5
  • 18
    • 74049110470 scopus 로고    scopus 로고
    • Anesthetic sensitivity of the Gloeobacter violaceus proton-gated ion channel
    • Weng Y, Yang L, Corringer PJ, Sonner JM, (2010) Anesthetic sensitivity of the Gloeobacter violaceus proton-gated ion channel. Anesth Analg 110: 59-63.
    • (2010) Anesth Analg , vol.110 , pp. 59-63
    • Weng, Y.1    Yang, L.2    Corringer, P.J.3    Sonner, J.M.4
  • 19
    • 78751673139 scopus 로고    scopus 로고
    • X-ray structures of general anaesthetics bound to a pentameric ligand-gated ion channel
    • Nury H, Van Renterghem C, Weng Y, Tran A, Baaden M, et al. (2011) X-ray structures of general anaesthetics bound to a pentameric ligand-gated ion channel. Nature 469: 428-431.
    • (2011) Nature , vol.469 , pp. 428-431
    • Nury, H.1    van Renterghem, C.2    Weng, Y.3    Tran, A.4    Baaden, M.5
  • 20
    • 16344374288 scopus 로고    scopus 로고
    • Structural basis for high-affinity volatile anesthetic binding in a natural 4-helix bundle protein
    • Liu R, Loll PJ, Eckenhoff RG, (2005) Structural basis for high-affinity volatile anesthetic binding in a natural 4-helix bundle protein. FASEB J 19: 567-576.
    • (2005) FASEB J , vol.19 , pp. 567-576
    • Liu, R.1    Loll, P.J.2    Eckenhoff, R.G.3
  • 22
    • 0037130185 scopus 로고    scopus 로고
    • 4D-QSAR analysis of a set of propofol analogues: mapping binding sites for an anesthetic phenol on the GABAA receptor
    • Krasowski MD, Hong X, Hopfinger AJ, Harrison NL, (2002) 4D-QSAR analysis of a set of propofol analogues: mapping binding sites for an anesthetic phenol on the GABAA receptor. J Med Chem 45: 3210-3221.
    • (2002) J Med Chem , vol.45 , pp. 3210-3221
    • Krasowski, M.D.1    Hong, X.2    Hopfinger, A.J.3    Harrison, N.L.4
  • 24
    • 45249095946 scopus 로고    scopus 로고
    • The history of barbiturates a century after their clinical introduction
    • Lopez-Munoz F, Ucha-Udabe R, Alamo C, (2005) The history of barbiturates a century after their clinical introduction. Neuropsychiatr Dis Treat 1: 329-343.
    • (2005) Neuropsychiatr Dis Treat , vol.1 , pp. 329-343
    • Lopez-Munoz, F.1    Ucha-Udabe, R.2    Alamo, C.3
  • 25
    • 0020319708 scopus 로고
    • Structural specificity of barbiturates and related drugs
    • Andrews PR, Mark LC, (1982) Structural specificity of barbiturates and related drugs. Anesthesiology 57: 314-320.
    • (1982) Anesthesiology , vol.57 , pp. 314-320
    • Andrews, P.R.1    Mark, L.C.2
  • 27
    • 58149267953 scopus 로고    scopus 로고
    • X-ray structure of a pentameric ligand-gated ion channel in an apparently open conformation
    • Bocquet N, Nury H, Baaden M, Le Poupon C, Changeux JP, et al. (2009) X-ray structure of a pentameric ligand-gated ion channel in an apparently open conformation. Nature 457: 111-114.
    • (2009) Nature , vol.457 , pp. 111-114
    • Bocquet, N.1    Nury, H.2    Baaden, M.3    Le Poupon, C.4    Changeux, J.P.5
  • 28
    • 33846429607 scopus 로고    scopus 로고
    • The common chemical motifs within anesthetic binding sites
    • Bertaccini EJ, Trudell JR, Franks NP, (2007) The common chemical motifs within anesthetic binding sites. Anesth Analg 104: 318-324.
    • (2007) Anesth Analg , vol.104 , pp. 318-324
    • Bertaccini, E.J.1    Trudell, J.R.2    Franks, N.P.3
  • 29
    • 7244247302 scopus 로고    scopus 로고
    • Weak intermolecular associations and anesthesia
    • Sandorfy C, (2004) Weak intermolecular associations and anesthesia. Anesthesiology 101: 1225-1227.
    • (2004) Anesthesiology , vol.101 , pp. 1225-1227
    • Sandorfy, C.1
  • 30
    • 0031832791 scopus 로고    scopus 로고
    • The 55% solution: a formula for molecular recognition in the liquid state
    • Mecozzi S, Rebek J Jr, (1998) The 55% solution: a formula for molecular recognition in the liquid state. Chem Eur J 4: 1016-1022.
    • (1998) Chem Eur J , vol.4 , pp. 1016-1022
    • Mecozzi, S.1    Rebek Jr., J.2
  • 31
    • 0033213239 scopus 로고    scopus 로고
    • The finer things in X-ray diffraction data collection
    • Pflugrath JW, (1999) The finer things in X-ray diffraction data collection. Acta Crystallogr D Biol Crystallogr D55: 1718-1725.
    • (1999) Acta Crystallogr D Biol Crystallogr , vol.D55 , pp. 1718-1725
    • Pflugrath, J.W.1
  • 36
    • 0032922193 scopus 로고    scopus 로고
    • SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model
    • Vaguine AA, Richelle J, Wodak SJ, (1999) SFCHECK: a unified set of procedures for evaluating the quality of macromolecular structure-factor data and their agreement with the atomic model. Acta Crystallogr D Biol Crystallogr 55: 191-205.
    • (1999) Acta Crystallogr D Biol Crystallogr , vol.55 , pp. 191-205
    • Vaguine, A.A.1    Richelle, J.2    Wodak, S.J.3
  • 39
    • 0027995683 scopus 로고
    • Detection, delineation, measurement and display of cavities in macromolecular structures
    • Kleywegt GJ, Jones TA, (1994) Detection, delineation, measurement and display of cavities in macromolecular structures. Acta Crystallogr D Biol Crystallogr 50: 178-185.
    • (1994) Acta Crystallogr D Biol Crystallogr , vol.50 , pp. 178-185
    • Kleywegt, G.J.1    Jones, T.A.2
  • 40
    • 0030598343 scopus 로고    scopus 로고
    • Deviations from standard atomic volumes as a quality measure for protein crystal structures
    • Pontius J, Richelle J, Wodak SJ, (1996) Deviations from standard atomic volumes as a quality measure for protein crystal structures. J Mol Biol 264: 121-136.
    • (1996) J Mol Biol , vol.264 , pp. 121-136
    • Pontius, J.1    Richelle, J.2    Wodak, S.J.3
  • 41
    • 0025228792 scopus 로고
    • Pharmacodynamics of tolerance development to the anesthetic and anticonvulsant effects of phenobarbital in rats
    • Dingemanse J, Hameter BM, Danhof M, (1990) Pharmacodynamics of tolerance development to the anesthetic and anticonvulsant effects of phenobarbital in rats. J Pharm Sci 79: 207-211.
    • (1990) J Pharm Sci , vol.79 , pp. 207-211
    • Dingemanse, J.1    Hameter, B.M.2    Danhof, M.3
  • 42
    • 0032984749 scopus 로고    scopus 로고
    • Preparation of barbiturate optical isomers and their effects on GABA(A) receptors
    • Tomlin SL, Jenkins A, Lieb WR, Franks NP, (1999) Preparation of barbiturate optical isomers and their effects on GABA(A) receptors. Anesthesiology 90: 1714-1722.
    • (1999) Anesthesiology , vol.90 , pp. 1714-1722
    • Tomlin, S.L.1    Jenkins, A.2    Lieb, W.R.3    Franks, N.P.4
  • 43
    • 0024410926 scopus 로고
    • Comparative study on barbiturates using isolated single neurons: GABA-mimetic action and augmentatory action on GABA response
    • Yakushiji T, Oyama Y, Akaike N, (1989) Comparative study on barbiturates using isolated single neurons: GABA-mimetic action and augmentatory action on GABA response. Brain Res 488: 357-360.
    • (1989) Brain Res , vol.488 , pp. 357-360
    • Yakushiji, T.1    Oyama, Y.2    Akaike, N.3
  • 44
    • 0029955764 scopus 로고    scopus 로고
    • Direct activation of GABAA receptors by barbiturates in cultured rat hippocampal neurons
    • Rho JM, Donevan SD, Rogawski MA, (1996) Direct activation of GABAA receptors by barbiturates in cultured rat hippocampal neurons. J Physiol 497 (Pt 2): 509-522.
    • (1996) J Physiol , vol.497 , Issue.PART 2 , pp. 509-522
    • Rho, J.M.1    Donevan, S.D.2    Rogawski, M.A.3
  • 45
    • 37249091134 scopus 로고    scopus 로고
    • Computation of octanol-water partition coefficients by guiding an additive model with knowledge
    • Cheng T, Zhao Y, Li X, Lin F, Xu Y, et al. (2007) Computation of octanol-water partition coefficients by guiding an additive model with knowledge. J Chem Inf Model 47: 2140-2148.
    • (2007) J Chem Inf Model , vol.47 , pp. 2140-2148
    • Cheng, T.1    Zhao, Y.2    Li, X.3    Lin, F.4    Xu, Y.5


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