-
1
-
-
0035105221
-
Perspective: transposable elements, parasitic DNA, and genome evolution
-
Kidwell MG, Lisch DR, (2001) Perspective: transposable elements, parasitic DNA, and genome evolution. Evolution 55: 1-24.
-
(2001)
Evolution
, vol.55
, pp. 1-24
-
-
Kidwell, M.G.1
Lisch, D.R.2
-
2
-
-
0030976039
-
A fusion promoter created by a new insertion sequence, IS1490, activates transcription of 2,4,5-trichlorophenoxyacetic acid catabolic genes in Burkholderia cepacia AC1100
-
Hübner A, Hendrickson W, (1997) A fusion promoter created by a new insertion sequence, IS1490, activates transcription of 2,4,5-trichlorophenoxyacetic acid catabolic genes in Burkholderia cepacia AC1100. J Bacteriol 179: 2717-2723.
-
(1997)
J Bacteriol
, vol.179
, pp. 2717-2723
-
-
Hübner, A.1
Hendrickson, W.2
-
3
-
-
42549100016
-
Transposable modules generated by a single copy of insertion sequence ISPme1 and their influence on structure and evolution of natural plasmids of Paracoccus methylutens DM12
-
Bartosik D, Putyrski M, Dziewit L, Malewska E, Szymanik M, et al. (2008) Transposable modules generated by a single copy of insertion sequence ISPme1 and their influence on structure and evolution of natural plasmids of Paracoccus methylutens DM12. J Bacteriol 190: 3306-3313.
-
(2008)
J Bacteriol
, vol.190
, pp. 3306-3313
-
-
Bartosik, D.1
Putyrski, M.2
Dziewit, L.3
Malewska, E.4
Szymanik, M.5
-
4
-
-
0031986751
-
Transposons as gene haulers
-
Mahillon J, (1998) Transposons as gene haulers. APMIS Suppl 84: 29-36.
-
(1998)
APMIS
, vol.Suppl 84
, pp. 29-36
-
-
Mahillon, J.1
-
5
-
-
85158048416
-
Insertion sequences revisited
-
In: Craig NL, Craigie M, Gellert M, Lambovitz AM, editors, Washington (DC), American Society for Microbiology
-
Chandler M, Mahillon J, (2002) Insertion sequences revisited. In: Craig NL, Craigie M, Gellert M, Lambovitz AM, editors. Mobile DNA II Washington (DC) American Society for Microbiology pp. 305-366.
-
(2002)
Mobile DNA II
, pp. 305-366
-
-
Chandler, M.1
Mahillon, J.2
-
6
-
-
33745125702
-
ISCR elements: novel gene-capturing systems of the 21st century?
-
Toleman MA, Bennett PM, Walsh TR, (2006) ISCR elements: novel gene-capturing systems of the 21st century? Microbiol Mol Biol Rev 70: 296-316.
-
(2006)
Microbiol Mol Biol Rev
, vol.70
, pp. 296-316
-
-
Toleman, M.A.1
Bennett, P.M.2
Walsh, T.R.3
-
7
-
-
3242877321
-
IS231-MIC231 elements from Bacillus cereus sensu lato are modular
-
De Palmenaer D, Vermeiren C, Mahillon J, (2004) IS231-MIC231 elements from Bacillus cereus sensu lato are modular. Mol Microbiol 53: 457-467.
-
(2004)
Mol Microbiol
, vol.53
, pp. 457-467
-
-
de Palmenaer, D.1
Vermeiren, C.2
Mahillon, J.3
-
8
-
-
0034628526
-
The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences
-
Parkhill J, Wren BW, Mungall K, Ketley JM, Churcher C, et al. (2000) The genome sequence of the food-borne pathogen Campylobacter jejuni reveals hypervariable sequences. Nature 6770: 665-668.
-
(2000)
Nature
, vol.6770
, pp. 665-668
-
-
Parkhill, J.1
Wren, B.W.2
Mungall, K.3
Ketley, J.M.4
Churcher, C.5
-
10
-
-
0035868875
-
Tn7 recognizes transposition target structures associated with DNA replication using the DNA-binding protein TnsE
-
Peters JE, Craig NL, (2001) Tn7 recognizes transposition target structures associated with DNA replication using the DNA-binding protein TnsE. Genes Dev 15: 737-747.
-
(2001)
Genes Dev
, vol.15
, pp. 737-747
-
-
Peters, J.E.1
Craig, N.L.2
-
11
-
-
85158006363
-
The movement of Tn3-like elements: transposition and cointegrate resolution
-
In: Craig NL, Craigie R, Gellert M, Lambowitz AM, editors, Washington (DC), American Society for Microbiology
-
Grindley NDF, (2002) The movement of Tn3-like elements: transposition and cointegrate resolution. In: Craig NL, Craigie R, Gellert M, Lambowitz AM, editors. Mobile DNA II Washington (DC) American Society for Microbiology pp. 272-302.
-
(2002)
Mobile DNA II
, pp. 272-302
-
-
Grindley, N.D.F.1
-
12
-
-
0028672048
-
Catabolic Transposons
-
Wyndham RC, Cashore AE, Nakatsu CH, Peel MC, (1994) Catabolic Transposons. Biodegradation 5: 323-342.
-
(1994)
Biodegradation
, vol.5
, pp. 323-342
-
-
Wyndham, R.C.1
Cashore, A.E.2
Nakatsu, C.H.3
Peel, M.C.4
-
14
-
-
33750031030
-
Redefining Paracoccus denitrificans and Paracoccus pantotrophus and the case for a reassessment of the strains held by international culture collections
-
Kelly DP, Euzéby JP, Goodhew CF, Wood AP, (2006) Redefining Paracoccus denitrificans and Paracoccus pantotrophus and the case for a reassessment of the strains held by international culture collections. Int J Syst Evol Microbiol 56: 2495-2500.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 2495-2500
-
-
Kelly, D.P.1
Euzéby, J.P.2
Goodhew, C.F.3
Wood, A.P.4
-
15
-
-
33646183453
-
Nitrate-dependent [Fe(II)EDTA]2- oxidation by Paracoccus ferrooxidans sp. nov., isolated from a denitrifying bioreactor
-
Kumaraswamy R, Sjollema K, Kuenen G, van Loosdrecht M, Muyzer G, (2006) Nitrate-dependent [Fe(II)EDTA]2- oxidation by Paracoccus ferrooxidans sp. nov., isolated from a denitrifying bioreactor. Syst Appl Microbiol 29: 276-286.
-
(2006)
Syst Appl Microbiol
, vol.29
, pp. 276-286
-
-
Kumaraswamy, R.1
Sjollema, K.2
Kuenen, G.3
van Loosdrecht, M.4
Muyzer, G.5
-
16
-
-
6044250186
-
Entrapment vectors - how to capture a functional transposable element
-
Solyga A, Bartosik D, (2004) Entrapment vectors- how to capture a functional transposable element. Pol J Microbiol 53: 139-144.
-
(2004)
Pol J Microbiol
, vol.53
, pp. 139-144
-
-
Solyga, A.1
Bartosik, D.2
-
17
-
-
0038039245
-
Identification and characterization of transposable elements of Paracoccus pantotrophus
-
Bartosik D, Sochacka M, Baj J, (2003) Identification and characterization of transposable elements of Paracoccus pantotrophus. J Bacteriol 185: 3753-3763.
-
(2003)
J Bacteriol
, vol.185
, pp. 3753-3763
-
-
Bartosik, D.1
Sochacka, M.2
Baj, J.3
-
18
-
-
33645535950
-
Identification of a transposable genomic island of Paracoccus pantotrophus DSM 11072 by its transposition to a novel entrapment vector pMMB2
-
Mikosa M, Sochacka-Pietal M, Baj J, Bartosik D, (2006) Identification of a transposable genomic island of Paracoccus pantotrophus DSM 11072 by its transposition to a novel entrapment vector pMMB2. Microbiology 152: 1063-1073.
-
(2006)
Microbiology
, vol.152
, pp. 1063-1073
-
-
Mikosa, M.1
Sochacka-Pietal, M.2
Baj, J.3
Bartosik, D.4
-
19
-
-
2142800596
-
Identification and distribution of insertion sequences of Paracoccus solventivorans
-
Bartosik D, Szymanik M, Baj J, (2003) Identification and distribution of insertion sequences of Paracoccus solventivorans. Appl Environ Microbiol 69: 7002-7008.
-
(2003)
Appl Environ Microbiol
, vol.69
, pp. 7002-7008
-
-
Bartosik, D.1
Szymanik, M.2
Baj, J.3
-
20
-
-
60349100621
-
Identification of a mosaic transposable element of Paracoccus marcusii composed of insertion sequence ISPmar4 (ISAs1 family) and an IS1247a-driven transposable module (TMo)
-
Szuplewska M, Bartosik D, (2009) Identification of a mosaic transposable element of Paracoccus marcusii composed of insertion sequence ISPmar4 (ISAs1 family) and an IS1247a-driven transposable module (TMo). FEMS Microbiol Lett 292: 216-221.
-
(2009)
FEMS Microbiol Lett
, vol.292
, pp. 216-221
-
-
Szuplewska, M.1
Bartosik, D.2
-
22
-
-
0033812144
-
A broad-host-range plasmid for isolating mobile genetic elements in gram-negative bacteria
-
Schneider D, Faure D, Noirclerc-Savoye M, Barriere AC, Coursange E, et al. (2000) A broad-host-range plasmid for isolating mobile genetic elements in gram-negative bacteria. Plasmid 44: 201-207.
-
(2000)
Plasmid
, vol.44
, pp. 201-207
-
-
Schneider, D.1
Faure, D.2
Noirclerc-Savoye, M.3
Barriere, A.C.4
Coursange, E.5
-
23
-
-
0022351923
-
Positive selection procedure for entrapment of insertion sequence elements in gram-negative bacteria
-
Gay P, Le Coq D, Steinmetz M, Berkelman T, Kado CI, (1985) Positive selection procedure for entrapment of insertion sequence elements in gram-negative bacteria. J Bacteriol 164: 918-921.
-
(1985)
J Bacteriol
, vol.164
, pp. 918-921
-
-
Gay, P.1
Le Coq, D.2
Steinmetz, M.3
Berkelman, T.4
Kado, C.I.5
-
24
-
-
0028180278
-
pBBR1MCS: a broad-host-range cloning vector
-
Kovach ME, Phillips RW, Elzer PH, Roop RM, Peterson KM, (1994) pBBR1MCS: a broad-host-range cloning vector. Biotechniques 16: 800-802.
-
(1994)
Biotechniques
, vol.16
, pp. 800-802
-
-
Kovach, M.E.1
Phillips, R.W.2
Elzer, P.H.3
Roop, R.M.4
Peterson, K.M.5
-
25
-
-
79959744352
-
DIY series of genetic cassettes useful in construction of versatile vectors specific for Alphaproteobacteria
-
Dziewit L, Adamczuk M, Szuplewska M, Bartosik D, (2011) DIY series of genetic cassettes useful in construction of versatile vectors specific for Alphaproteobacteria. J Microbiol Methods 86: 166-174.
-
(2011)
J Microbiol Methods
, vol.86
, pp. 166-174
-
-
Dziewit, L.1
Adamczuk, M.2
Szuplewska, M.3
Bartosik, D.4
-
26
-
-
83055176403
-
Mobilizable narrow host range plasmids as natural suicide vectors enabling horizontal gene transfer among distantly related bacterial species
-
Smorawinska M, Szuplewska M, Zaleski P, Wawrzyniak P, Maj A, Plucienniczak A, Bartosik D, (2012) Mobilizable narrow host range plasmids as natural suicide vectors enabling horizontal gene transfer among distantly related bacterial species. FEMS Microbiol Lett 326: 76-82.
-
(2012)
FEMS Microbiol Lett
, vol.326
, pp. 76-82
-
-
Smorawinska, M.1
Szuplewska, M.2
Zaleski, P.3
Wawrzyniak, P.4
Maj, A.5
Plucienniczak, A.6
Bartosik, D.7
-
27
-
-
0035688331
-
Identification of the partitioning site within the repABC-type replicon of the composite Paracoccus versutus plasmid pTAV1
-
Bartosik D, Szymanik M, Wysocka E, (2001) Identification of the partitioning site within the repABC-type replicon of the composite Paracoccus versutus plasmid pTAV1. J Bacteriol 183: 6234-6243.
-
(2001)
J Bacteriol
, vol.183
, pp. 6234-6243
-
-
Bartosik, D.1
Szymanik, M.2
Wysocka, E.3
-
28
-
-
0002846133
-
An improved method for transformation of E. coli with ColE1-derived plasmids
-
In: Boyer HB, Nicosia S, editors, Amsterdam, Elsevier/North-Holland
-
Kushner SR, (1978) An improved method for transformation of E. coli with ColE1-derived plasmids. In: Boyer HB, Nicosia S, editors. Genetic Engineering Amsterdam Elsevier/North-Holland pp. 17-23.
-
(1978)
Genetic Engineering
, pp. 17-23
-
-
Kushner, S.R.1
-
29
-
-
0018800089
-
A rapid alkaline extraction procedure for screening recombinant plasmid DNA
-
Birnboim HC, Doly J, (1979) A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 7: 1513-1523.
-
(1979)
Nucleic Acids Res
, vol.7
, pp. 1513-1523
-
-
Birnboim, H.C.1
Doly, J.2
-
30
-
-
0027215943
-
A simple and rapid method for the preparation of gram-negative bacterial genomic DNA
-
Chen W, Kuo T, (1993) A simple and rapid method for the preparation of gram-negative bacterial genomic DNA. Nucleic Acids Res 21: 2260.
-
(1993)
Nucleic Acids Res
, vol.21
, pp. 2260
-
-
Chen, W.1
Kuo, T.2
-
32
-
-
77749245788
-
Plasmid pAMI2 of Paracoccus aminophilus JCM 7686 carries N,N-dimethylformamide degradation-related genes whose expression is activated by a LuxR family regulator
-
Dziewit L, Dmowski M, Baj J, Bartosik D, (2010) Plasmid pAMI2 of Paracoccus aminophilus JCM 7686 carries N,N-dimethylformamide degradation-related genes whose expression is activated by a LuxR family regulator. Appl Environ Microbiol 76: 1861-1869.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 1861-1869
-
-
Dziewit, L.1
Dmowski, M.2
Baj, J.3
Bartosik, D.4
-
33
-
-
33644873699
-
ISfinder: the reference centre for bacterial insertion sequences
-
Siguier P, Perochon J, Lestrade L, Mahillon J, Chandler M, (2006) ISfinder: the reference centre for bacterial insertion sequences. Nucleic Acids Res 34: 32-36.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 32-36
-
-
Siguier, P.1
Perochon, J.2
Lestrade, L.3
Mahillon, J.4
Chandler, M.5
-
34
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, et al. (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
-
35
-
-
0033635022
-
Artemis: sequence visualization and annotation
-
Rutherford K, Parkhill J, Crook J, Horsnell T, Rice P, et al. (2000) Artemis: sequence visualization and annotation. Bioinformatics 16: 944-945.
-
(2000)
Bioinformatics
, vol.16
, pp. 944-945
-
-
Rutherford, K.1
Parkhill, J.2
Crook, J.3
Horsnell, T.4
Rice, P.5
-
36
-
-
84879282799
-
Nomenclature of transposable elements in prokaryotes
-
Campbell A, Starlinger P, Berg DE, Botstein D, Lederberg EM, et al. (1979) Nomenclature of transposable elements in prokaryotes. Plasmid 2: 466-473.
-
(1979)
Plasmid
, vol.2
, pp. 466-473
-
-
Campbell, A.1
Starlinger, P.2
Berg, D.E.3
Botstein, D.4
Lederberg, E.M.5
-
37
-
-
0011157367
-
Frameshifting is required for production of the transposase encoded by insertion sequence 1
-
Sekine Y, Ohtsubo E, (1989) Frameshifting is required for production of the transposase encoded by insertion sequence 1. Proc Nat Acad Sci U S A 86: 4609-4613.
-
(1989)
Proc Nat Acad Sci U S A
, vol.86
, pp. 4609-4613
-
-
Sekine, Y.1
Ohtsubo, E.2
-
38
-
-
0029048067
-
Characterization of IS1221 from Mycoplasma hyorhinis: expression of its putative transposase in Escherichia coli incorporates a ribosomal frameshift mechanism
-
Zheng J, McIntosh MA, (1995) Characterization of IS1221 from Mycoplasma hyorhinis: expression of its putative transposase in Escherichia coli incorporates a ribosomal frameshift mechanism. Mol Microbiol 16: 669-685.
-
(1995)
Mol Microbiol
, vol.16
, pp. 669-685
-
-
Zheng, J.1
McIntosh, M.A.2
-
39
-
-
0024291348
-
Integration host factor: a protein for all reasons
-
Friedman DI, (1988) Integration host factor: a protein for all reasons. Cell 55: 545-554.
-
(1988)
Cell
, vol.55
, pp. 545-554
-
-
Friedman, D.I.1
-
40
-
-
0032577448
-
IHF modulation of Tn10 transposition: sensory transduction of supercoiling status via a proposed protein/DNA molecular spring
-
Chalmers R, Guhathakurta A, Benjamin H, Kleckner N, (1998) IHF modulation of Tn10 transposition: sensory transduction of supercoiling status via a proposed protein/DNA molecular spring. Cell 93: 897-908.
-
(1998)
Cell
, vol.93
, pp. 897-908
-
-
Chalmers, R.1
Guhathakurta, A.2
Benjamin, H.3
Kleckner, N.4
-
41
-
-
0034985856
-
Maximal expression of membrane-bound nitrate reductase in Paracoccus is induced by nitrate via a third FNR-like regulator named NarR
-
Wood NJ, Alizadeh T, Bennett S, Pearce J, Ferguson SJ, et al. (2001) Maximal expression of membrane-bound nitrate reductase in Paracoccus is induced by nitrate via a third FNR-like regulator named NarR. J Bacteriol 183: 3606-3613.
-
(2001)
J Bacteriol
, vol.183
, pp. 3606-3613
-
-
Wood, N.J.1
Alizadeh, T.2
Bennett, S.3
Pearce, J.4
Ferguson, S.J.5
-
42
-
-
0030885441
-
Analysis of the role of the nnrR gene product in the response of Rhodobacter sphaeroides 2.4.1 to exogenous nitric oxide
-
Kwiatkowski AV, Laratta WP, Toffanin A, Shapleigh JP, (1997) Analysis of the role of the nnrR gene product in the response of Rhodobacter sphaeroides 2.4.1 to exogenous nitric oxide. J Bacteriol 179: 5618-5620.
-
(1997)
J Bacteriol
, vol.179
, pp. 5618-5620
-
-
Kwiatkowski, A.V.1
Laratta, W.P.2
Toffanin, A.3
Shapleigh, J.P.4
-
43
-
-
79955380871
-
Bacterial conversion of folinic acid is required for antifolate resistance
-
Ogwang S, Nguyen HT, Sherman M, Bajaksouzian S, Jacobs MR, et al. (2011) Bacterial conversion of folinic acid is required for antifolate resistance. J Biol Chem 286: 15377-15390.
-
(2011)
J Biol Chem
, vol.286
, pp. 15377-15390
-
-
Ogwang, S.1
Nguyen, H.T.2
Sherman, M.3
Bajaksouzian, S.4
Jacobs, M.R.5
-
44
-
-
0032440064
-
The arcABDC gene cluster, encoding the arginine deiminase pathway of Bacillus licheniformis, and its activation by the arginine repressor argR
-
Maghnouj A, de Sousa Cabral TF, Stalon V, Vander Wauven C, (1998) The arcABDC gene cluster, encoding the arginine deiminase pathway of Bacillus licheniformis, and its activation by the arginine repressor argR. J Bacteriol 180: 6468-6475.
-
(1998)
J Bacteriol
, vol.180
, pp. 6468-6475
-
-
Maghnouj, A.1
de Sousa Cabral, T.F.2
Stalon, V.3
Vander Wauven, C.4
-
45
-
-
77954675458
-
Limitations in doxorubicin production from Streptomyces peucetius
-
Malla S, Niraula NP, Singh B, Liou K, Sohng JK, (2010) Limitations in doxorubicin production from Streptomyces peucetius. Microbiol Res 165: 427-435.
-
(2010)
Microbiol Res
, vol.165
, pp. 427-435
-
-
Malla, S.1
Niraula, N.P.2
Singh, B.3
Liou, K.4
Sohng, J.K.5
-
47
-
-
67349260702
-
The new IS1595 family, its relation to IS1 and the frontier between insertion sequences and transposons
-
Siguier P, Gagnevin L, Chandler M, (2009) The new IS1595 family, its relation to IS1 and the frontier between insertion sequences and transposons. Res Microbiol 160: 232-241.
-
(2009)
Res Microbiol
, vol.160
, pp. 232-241
-
-
Siguier, P.1
Gagnevin, L.2
Chandler, M.3
-
48
-
-
85047694620
-
Antimicrobial activities of daunorubicin and adriamycin derivatives on bacterial and protoplast type L-from cells of Bacillus subtilis 170, Escherichia coli B, and Proteus mirabilis VI. Structure, activity relationship
-
Gumpert J, Dornberger K, Smith TH, (1982) Antimicrobial activities of daunorubicin and adriamycin derivatives on bacterial and protoplast type L-from cells of Bacillus subtilis 170, Escherichia coli B, and Proteus mirabilis VI. Structure, activity relationship. Z Allg Mikrobiol 22: 687-692.
-
(1982)
Z Allg Mikrobiol
, vol.22
, pp. 687-692
-
-
Gumpert, J.1
Dornberger, K.2
Smith, T.H.3
-
50
-
-
0025812353
-
Anaerobic regulation of transcription initiation in the arcDABC operon of Pseudomonas aeruginosa
-
Gamper M, Zimmermann A, Haas D, (1991) Anaerobic regulation of transcription initiation in the arcDABC operon of Pseudomonas aeruginosa. J Bacteriol 173: 4742-4750.
-
(1991)
J Bacteriol
, vol.173
, pp. 4742-4750
-
-
Gamper, M.1
Zimmermann, A.2
Haas, D.3
-
51
-
-
0025940311
-
Chlorobenzoate catabolic transposon Tn5271 is a composite class I element with flanking class II insertion sequences
-
Nakatsu C, Ng J, Singh R, Straus N, Wyndham C, (1991) Chlorobenzoate catabolic transposon Tn5271 is a composite class I element with flanking class II insertion sequences. Proc Nat Acad Sci U S A 88: 8312-8316.
-
(1991)
Proc Nat Acad Sci U S A
, vol.88
, pp. 8312-8316
-
-
Nakatsu, C.1
Ng, J.2
Singh, R.3
Straus, N.4
Wyndham, C.5
-
52
-
-
79952804546
-
Genome sequence of Paracoccus sp. Strain TRP, a Chlorpyrifos Biodegrader
-
Li K, Wang S, Shi Y, Qu J, Zhai Y, et al. (2011) Genome sequence of Paracoccus sp. Strain TRP, a Chlorpyrifos Biodegrader. J Bacteriol 193: 1786-1787.
-
(2011)
J Bacteriol
, vol.193
, pp. 1786-1787
-
-
Li, K.1
Wang, S.2
Shi, Y.3
Qu, J.4
Zhai, Y.5
-
53
-
-
0031959474
-
Genes coding for respiratory complexes map on all three chromosomes of the Paracoccus denitrificans genome
-
Winterstein C, Ludwig B, (1998) Genes coding for respiratory complexes map on all three chromosomes of the Paracoccus denitrificans genome. Arch Microbiol 169: 275-281.
-
(1998)
Arch Microbiol
, vol.169
, pp. 275-281
-
-
Winterstein, C.1
Ludwig, B.2
-
54
-
-
0034468558
-
Functional Tn5393-like transposon in the R plasmid pRAS2 from the fish pathogen Aeromonas salmonicida subspecies salmonicida isolated in Norway
-
L'Abée-Lund TM, Sørum H, (2000) Functional Tn5393-like transposon in the R plasmid pRAS2 from the fish pathogen Aeromonas salmonicida subspecies salmonicida isolated in Norway. Appl Environ Microbiol 66: 5533-5535.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 5533-5535
-
-
L'Abée-Lund, T.M.1
Sørum, H.2
-
55
-
-
0029090742
-
Expression of the strA-strB streptomycin resistance genes in Pseudomonas syringae and Xanthomonas campestris and characterization of IS6100 in X. campestris
-
Sundin GW, Bender CL, (1995) Expression of the strA-strB streptomycin resistance genes in Pseudomonas syringae and Xanthomonas campestris and characterization of IS6100 in X. campestris. Appl Environ Microbiol 61: 2891-2897.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 2891-2897
-
-
Sundin, G.W.1
Bender, C.L.2
-
56
-
-
0028176653
-
Insertional activation of cepA leads to high-level beta-lactamase expression in Bacteroides fragilis clinical isolates
-
Rogers MB, Bennett TK, Payne CM, Smith CJ, (1994) Insertional activation of cepA leads to high-level beta-lactamase expression in Bacteroides fragilis clinical isolates. J Bacteriol 176: 4376-4384.
-
(1994)
J Bacteriol
, vol.176
, pp. 4376-4384
-
-
Rogers, M.B.1
Bennett, T.K.2
Payne, C.M.3
Smith, C.J.4
-
57
-
-
0032896896
-
A novel mechanism of phase variation of virulence in Staphylococcus epidermidis: evidence for control of the polysaccharide intercellular adhesin synthesis by alternating insertion and excision of the insertion sequence element IS256
-
Ziebuhr W, Krimmer V, Rachid S, Lössner I, Götz F, et al. (1999) A novel mechanism of phase variation of virulence in Staphylococcus epidermidis: evidence for control of the polysaccharide intercellular adhesin synthesis by alternating insertion and excision of the insertion sequence element IS256. Mol Microbiol 32: 345-356.
-
(1999)
Mol Microbiol
, vol.32
, pp. 345-356
-
-
Ziebuhr, W.1
Krimmer, V.2
Rachid, S.3
Lössner, I.4
Götz, F.5
-
58
-
-
78651357453
-
Insertion sequence-excision enhancer removes transposable elements from bacterial genomes and induces various genomic deletions
-
Kusumoto M, Ooka T, Nishiya Y, Ogura Y, Saito T, et al. (2011) Insertion sequence-excision enhancer removes transposable elements from bacterial genomes and induces various genomic deletions. Nat Commun 2: 152.
-
(2011)
Nat Commun
, vol.2
, pp. 152
-
-
Kusumoto, M.1
Ooka, T.2
Nishiya, Y.3
Ogura, Y.4
Saito, T.5
-
59
-
-
66149116900
-
Paracoccus aestuarii sp. nov., isolated from tidal flat sediment
-
Roh SW, Nam YD, Chang HW, Kim KH, Kim MS, et al. (2009) Paracoccus aestuarii sp. nov., isolated from tidal flat sediment. Int J Syst Evol Microbiol 59: 790-794.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 790-794
-
-
Roh, S.W.1
Nam, Y.D.2
Chang, H.W.3
Kim, K.H.4
Kim, M.S.5
-
60
-
-
0024503638
-
Paracoccus alcaliphilus sp. nov., an alkaliphilic and facultatively methylotrophic bacterium
-
Urakami T, Tamaoka J, Suzuki K, Komagata K, (1989) Paracoccus alcaliphilus sp. nov., an alkaliphilic and facultatively methylotrophic bacterium. Int J Syst Bacteriol 39: 116-121.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 116-121
-
-
Urakami, T.1
Tamaoka, J.2
Suzuki, K.3
Komagata, K.4
-
61
-
-
0031798778
-
Identification of bacterial isolates from biofilters as Paracoccus alkenifer sp. nov. and Paracoccus solventivorans with emended description of Paracoccus solventivorans
-
Lipski A, Reichert K, Reuter B, Spröer C, Altendorf K, (1998) Identification of bacterial isolates from biofilters as Paracoccus alkenifer sp. nov. and Paracoccus solventivorans with emended description of Paracoccus solventivorans. Int J Syst Bacteriol 48: 529-536.
-
(1998)
Int J Syst Bacteriol
, vol.48
, pp. 529-536
-
-
Lipski, A.1
Reichert, K.2
Reuter, B.3
Spröer, C.4
Altendorf, K.5
-
62
-
-
0025358474
-
Paracoccus aminophilus sp. nov. and Paracoccus aminovorans sp. nov. which utilize N,N-dimethylformamide
-
Urakami T, Araki H, Oyanagi H, Suzuki KI, Komagata K, (1990) Paracoccus aminophilus sp. nov. and Paracoccus aminovorans sp. nov. which utilize N,N-dimethylformamide. Int J Syst Bacteriol 40: 287-291.
-
(1990)
Int J Syst Bacteriol
, vol.40
, pp. 287-291
-
-
Urakami, T.1
Araki, H.2
Oyanagi, H.3
Suzuki, K.I.4
Komagata, K.5
-
63
-
-
33745684902
-
Paracoccus bengalensis sp. nov., a novel sulfur-oxidizing chemolithoautotroph from the rhizospheric soil of an Indian tropical leguminous plant
-
Ghosh W, Mandal S, Roy P, (2006) Paracoccus bengalensis sp. nov., a novel sulfur-oxidizing chemolithoautotroph from the rhizospheric soil of an Indian tropical leguminous plant. Syst Appl Microbiol 29: 396-403.
-
(2006)
Syst Appl Microbiol
, vol.29
, pp. 396-403
-
-
Ghosh, W.1
Mandal, S.2
Roy, P.3
-
64
-
-
0032943528
-
A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the combination Paracoccus pantotrophus comb. nov
-
Rainey FA, Kelly DP, Stackebrandt E, Burghardt J, Hiraishi A, Katayama Y, et al. (1999) A re-evaluation of the taxonomy of Paracoccus denitrificans and a proposal for the combination Paracoccus pantotrophus comb. nov. Int J Syst Bacteriol 49: 645-651.
-
(1999)
Int J Syst Bacteriol
, vol.49
, pp. 645-651
-
-
Rainey, F.A.1
Kelly, D.P.2
Stackebrandt, E.3
Burghardt, J.4
Hiraishi, A.5
Katayama, Y.6
-
65
-
-
5444232944
-
Paracoccus haeundaensis sp. nov., a Gram-negative, halophilic, astaxanthin-producing bacterium
-
Lee JH, Kim YS, Choi TJ, Lee WJ, Kim YT, (2004) Paracoccus haeundaensis sp. nov., a Gram-negative, halophilic, astaxanthin-producing bacterium. Int J Syst Evol Microbiol 54: 1699-1702.
-
(2004)
Int J Syst Evol Microbiol
, vol.54
, pp. 1699-1702
-
-
Lee, J.H.1
Kim, Y.S.2
Choi, T.J.3
Lee, W.J.4
Kim, Y.T.5
-
66
-
-
40449093936
-
Paracoccus halophilus sp. nov., isolated from marine sediment of the South China Sea, China, and emended description of genus Paracoccus Davis 1969
-
Liu ZP, Wang BJ, Liu XY, Dai X, Liu YH, et al. (2008) Paracoccus halophilus sp. nov., isolated from marine sediment of the South China Sea, China, and emended description of genus Paracoccus Davis 1969. Int J Syst Evol Microbiol 58: 257-261.
-
(2008)
Int J Syst Evol Microbiol
, vol.58
, pp. 257-261
-
-
Liu, Z.P.1
Wang, B.J.2
Liu, X.Y.3
Dai, X.4
Liu, Y.H.5
-
67
-
-
33750020041
-
Paracoccus homiensis sp. nov., isolated from a sea-sand sample
-
Kim BY, Weon HY, Yoo SH, Kwon SW, Cho YH, et al. (2006) Paracoccus homiensis sp. nov., isolated from a sea-sand sample. Int J Syst Evol Microbiol 56: 2387-2390.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 2387-2390
-
-
Kim, B.Y.1
Weon, H.Y.2
Yoo, S.H.3
Kwon, S.W.4
Cho, Y.H.5
-
68
-
-
0034265538
-
A novel plant-associated thermotolerant alkaliphilic methylotroph of the genus Paracoccus
-
Doronina NV, Trotsenko YA, (2000) A novel plant-associated thermotolerant alkaliphilic methylotroph of the genus Paracoccus. Microbiology 69: 593-598.
-
(2000)
Microbiology
, vol.69
, pp. 593-598
-
-
Doronina, N.V.1
Trotsenko, Y.A.2
-
69
-
-
22544487551
-
Paracoccus koreensis sp. nov., isolated from anaerobic granules in an upflow anaerobic sludge blanket (UASB) reactor
-
La HJ, Im WT, Ten LN, Kang MS, Shin DY, et al. (2005) Paracoccus koreensis sp. nov., isolated from anaerobic granules in an upflow anaerobic sludge blanket (UASB) reactor. Int J Syst Evol Microbiol 55: 1657-1660.
-
(2005)
Int J Syst Evol Microbiol
, vol.55
, pp. 1657-1660
-
-
La, H.J.1
Im, W.T.2
Ten, L.N.3
Kang, M.S.4
Shin, D.Y.5
-
70
-
-
0031776637
-
Paracoccus marcusii sp. nov., an orange gram-negative coccus
-
Harker M, Hirschberg J, Oren A, (1998) Paracoccus marcusii sp. nov., an orange gram-negative coccus. Int J Syst Bacteriol 2: 543-548.
-
(1998)
Int J Syst Bacteriol
, vol.2
, pp. 543-548
-
-
Harker, M.1
Hirschberg, J.2
Oren, A.3
-
71
-
-
55649097096
-
Bacteria, hypertolerant to arsenic in the rocks of an ancient gold mine, and their potential role in dissemination of arsenic pollution
-
Drewniak L, Styczek A, Majder-Lopatka M, Sklodowska A, (2008) Bacteria, hypertolerant to arsenic in the rocks of an ancient gold mine, and their potential role in dissemination of arsenic pollution. Environ Pollut 156: 1069-1074.
-
(2008)
Environ Pollut
, vol.156
, pp. 1069-1074
-
-
Drewniak, L.1
Styczek, A.2
Majder-Lopatka, M.3
Sklodowska, A.4
-
72
-
-
0031824087
-
Paracoccus methylutens sp. nov. - a new aerobic facultatively methylotrophic bacterium utilizing dichloromethane
-
Doronina NV, Trotsenko YA, Krausova VI, Suzina NE, (1998) Paracoccus methylutens sp. nov.- a new aerobic facultatively methylotrophic bacterium utilizing dichloromethane. Syst Appl Microbiol 21: 230-236.
-
(1998)
Syst Appl Microbiol
, vol.21
, pp. 230-236
-
-
Doronina, N.V.1
Trotsenko, Y.A.2
Krausova, V.I.3
Suzina, N.E.4
-
73
-
-
0030770526
-
Autotrophic growth on carbon disulfide is a property of novel strains of Paracoccus denitrifcans
-
Jordan SL, McDonald IR, Kraczkiewicz-Dowjat AJ, Kelly DP, Rainey FA, et al. (1997) Autotrophic growth on carbon disulfide is a property of novel strains of Paracoccus denitrifcans. Arch Microbiol 168: 225-236.
-
(1997)
Arch Microbiol
, vol.168
, pp. 225-236
-
-
Jordan, S.L.1
McDonald, I.R.2
Kraczkiewicz-Dowjat, A.J.3
Kelly, D.P.4
Rainey, F.A.5
-
74
-
-
0020440477
-
Physical evidence for plasmids in autotrophic, especially hydrogen-oxidizing bacteria
-
Gerstenberg C, Friedrich B, Schlegel HG, (1982) Physical evidence for plasmids in autotrophic, especially hydrogen-oxidizing bacteria. Arch Microbiol 133: 90-96.
-
(1982)
Arch Microbiol
, vol.133
, pp. 90-96
-
-
Gerstenberg, C.1
Friedrich, B.2
Schlegel, H.G.3
-
75
-
-
0037358950
-
Paracoccus seriniphilus sp. nov., an L-serine-dehydratase-producing coccus isolated from the marine bryozoan Bugula plumosa
-
Pukall R, Laroche M, Kroppenstedt RM, Schumann P, Stackebrandt E, et al. (2003) Paracoccus seriniphilus sp. nov., an L-serine-dehydratase-producing coccus isolated from the marine bryozoan Bugula plumosa. Int J Syst Evol Microbiol 53: 443-447.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 443-447
-
-
Pukall, R.1
Laroche, M.2
Kroppenstedt, R.M.3
Schumann, P.4
Stackebrandt, E.5
-
76
-
-
0029820169
-
Isolation and characterization of a new gram-negative, acetone-degrading, nitrate-reducing bacterium from soil, Paracoccus solventivorans sp. nov
-
Siller H, Rainey FA, Stackebrandt E, Winter J, (1996) Isolation and characterization of a new gram-negative, acetone-degrading, nitrate-reducing bacterium from soil, Paracoccus solventivorans sp. nov. Int J Syst Bacteriol 46: 1125-1130.
-
(1996)
Int J Syst Bacteriol
, vol.46
, pp. 1125-1130
-
-
Siller, H.1
Rainey, F.A.2
Stackebrandt, E.3
Winter, J.4
-
77
-
-
33751203558
-
Paracoccus sulfuroxidans sp. nov., a sulfur oxidizer from activated sludge
-
Liu XY, Wang BJ, Jiang CY, Liu SJ, (2006) Paracoccus sulfuroxidans sp. nov., a sulfur oxidizer from activated sludge. Int J Syst Evol Microbiol 56: 2693-2695.
-
(2006)
Int J Syst Evol Microbiol
, vol.56
, pp. 2693-2695
-
-
Liu, X.Y.1
Wang, B.J.2
Jiang, C.Y.3
Liu, S.J.4
-
78
-
-
0029076627
-
Paracoccus thiocyanatus sp. nov., a new species of thiocyanate-utilizing facultative chemolithotroph, and transfer of Thiobacillus versutus to the genus Paracoccus as Paracoccus versutus comb. nov. with emendation of the genus
-
Katayama Y, Hiraishi A, Kuraish H, (1995) Paracoccus thiocyanatus sp. nov., a new species of thiocyanate-utilizing facultative chemolithotroph, and transfer of Thiobacillus versutus to the genus Paracoccus as Paracoccus versutus comb. nov. with emendation of the genus. Microbiology 141: 1469-1477.
-
(1995)
Microbiology
, vol.141
, pp. 1469-1477
-
-
Katayama, Y.1
Hiraishi, A.2
Kuraish, H.3
-
79
-
-
0036739786
-
Molecular characterization of functional modules of plasmid pWKS1 of Paracoccus pantotrophus DSM 11072
-
Bartosik D, Baj J, Sochacka M, Piechucka E, Wlodarczyk M, (2002) Molecular characterization of functional modules of plasmid pWKS1 of Paracoccus pantotrophus DSM 11072. Microbiology 148: 2847-2856.
-
(2002)
Microbiology
, vol.148
, pp. 2847-2856
-
-
Bartosik, D.1
Baj, J.2
Sochacka, M.3
Piechucka, E.4
Wlodarczyk, M.5
-
80
-
-
0037335732
-
Paracoccus yeeii sp. nov. (formerly CDC group EO-2), a novel bacterial species associated with human infection
-
Daneshvar MI, Hollis DG, Weyant RS, Steigerwalt AG, Whitney AM, et al. (2003) Paracoccus yeeii sp. nov. (formerly CDC group EO-2), a novel bacterial species associated with human infection. J Clin Microbiol 41: 1289-1294.
-
(2003)
J Clin Microbiol
, vol.41
, pp. 1289-1294
-
-
Daneshvar, M.I.1
Hollis, D.G.2
Weyant, R.S.3
Steigerwalt, A.G.4
Whitney, A.M.5
-
81
-
-
0346666772
-
Paracoccus zeaxanthinifaciens sp. nov., a zeaxanthin-producing bacterium
-
Berry A, Janssens D, Humbelin M, Jore JP, Hoste B, et al. (2003) Paracoccus zeaxanthinifaciens sp. nov., a zeaxanthin-producing bacterium. Int J Syst Evol Microbiol 53: 231-238.
-
(2003)
Int J Syst Evol Microbiol
, vol.53
, pp. 231-238
-
-
Berry, A.1
Janssens, D.2
Humbelin, M.3
Jore, J.P.4
Hoste, B.5
-
82
-
-
0028949105
-
Adaptation of Xanthobacter autotrophicus GJ10 to bromoacetate due to activation and mobilization of the haloacetate dehalogenase gene by insertion element IS1247
-
Van der Ploeg J, Willemsen M, van Hall G, Janssen DB, (1995) Adaptation of Xanthobacter autotrophicus GJ10 to bromoacetate due to activation and mobilization of the haloacetate dehalogenase gene by insertion element IS1247. J Bacteriol 177: 1348-1356.
-
(1995)
J Bacteriol
, vol.177
, pp. 1348-1356
-
-
van der Ploeg, J.1
Willemsen, M.2
van Hall, G.3
Janssen, D.B.4
-
83
-
-
0029120102
-
Integration of heterologous DNA into the genome of Paracoccus denitrificans is mediated by a family of IS1248-related elements and a second type of integrative recombination event
-
Van Spanning RJ, Reijnders WN, Stouthamer AH, (1995) Integration of heterologous DNA into the genome of Paracoccus denitrificans is mediated by a family of IS1248-related elements and a second type of integrative recombination event. J Bacteriol 177: 4772-4778.
-
(1995)
J Bacteriol
, vol.177
, pp. 4772-4778
-
-
van Spanning, R.J.1
Reijnders, W.N.2
Stouthamer, A.H.3
|