메뉴 건너뛰기




Volumn 7, Issue 1, 2012, Pages

Identifying and characterizing alternative molecular markers for the symbiotic and free-living dinoflagellate genus symbiodinium

Author keywords

[No Author keywords available]

Indexed keywords

ACTIN; CALMODULIN; COMPLEMENTARY DNA; INTERNAL TRANSCRIBED SPACER 1; NICOTINAMIDE ADENINE DINUCLEOTIDE;

EID: 84855406723     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0029816     Document Type: Article
Times cited : (70)

References (77)
  • 1
    • 84986804667 scopus 로고
    • Thecate heterotrophic dinoflagellates: feeding behavior and mechanisms
    • Jacobson DM, Anderson DM, (1986) Thecate heterotrophic dinoflagellates: feeding behavior and mechanisms. J Phycol 22: 249-258.
    • (1986) J Phycol , vol.22 , pp. 249-258
    • Jacobson, D.M.1    Anderson, D.M.2
  • 2
    • 84986761473 scopus 로고
    • Estimating the daily contribution of carbon from zooxanthellae to coral animal respiration
    • Muscatine L, McCloskey LR, Marian RE, (1981) Estimating the daily contribution of carbon from zooxanthellae to coral animal respiration. Limnol Oceanogr 26: 601-11.
    • (1981) Limnol Oceanogr , vol.26 , pp. 601-611
    • Muscatine, L.1    McCloskey, L.R.2    Marian, R.E.3
  • 3
    • 85040870461 scopus 로고
    • Oxford, Blackwell Science Publishers, Botanical Monographs
    • Taylor FJR, (1987) The biology of dinoflagellates Oxford Blackwell Science Publishers, Botanical Monographs.
    • (1987) The Biology of Dinoflagellates
    • Taylor, F.J.R.1
  • 4
    • 84986513651 scopus 로고
    • The enigma of the dinoflagellate chromosome
    • Rizzo PJ, (1991) The enigma of the dinoflagellate chromosome. J Protozool 38: 246-252.
    • (1991) J Protozool , vol.38 , pp. 246-252
    • Rizzo, P.J.1
  • 5
    • 43049169011 scopus 로고    scopus 로고
    • The remarkable chloroplast genome of dinoflagellates
    • Howe CJ, Nisbet RER, Barbrook AC, (2008) The remarkable chloroplast genome of dinoflagellates. J Exp Bot 59: 1035-1045.
    • (2008) J Exp Bot , vol.59 , pp. 1035-1045
    • Howe, C.J.1    Nisbet, R.E.R.2    Barbrook, A.C.3
  • 6
    • 0014823390 scopus 로고
    • The nature and processing of ribosomal ribonucleic acid in dinoflagellates
    • Rae PMM, (1970) The nature and processing of ribosomal ribonucleic acid in dinoflagellates. J Cell Biol 46: 106-113.
    • (1970) J Cell Biol , vol.46 , pp. 106-113
    • Rae, P.M.M.1
  • 7
    • 0033834347 scopus 로고    scopus 로고
    • Minicircular plastid DNA in the dinoflagellate Amphidinium operculatum
    • Barbrook AC, Howe CJ, (2000) Minicircular plastid DNA in the dinoflagellate Amphidinium operculatum. Mol Gen Genet 263: 152-158.
    • (2000) Mol Gen Genet , vol.263 , pp. 152-158
    • Barbrook, A.C.1    Howe, C.J.2
  • 8
    • 0030096623 scopus 로고    scopus 로고
    • Rubisco in marine symbiotic dinoflagellates: Form II enzymes in eukaryotic oxygenic phototrophs encoded by a nuclear multigene family
    • Rowan R, Whitney SM, Fowler A, Yellowlees D, (1996) Rubisco in marine symbiotic dinoflagellates: Form II enzymes in eukaryotic oxygenic phototrophs encoded by a nuclear multigene family. Plant Cell 8: 539-553.
    • (1996) Plant Cell , vol.8 , pp. 539-553
    • Rowan, R.1    Whitney, S.M.2    Fowler, A.3    Yellowlees, D.4
  • 9
    • 33644822102 scopus 로고    scopus 로고
    • Isolation and characterization of PCNA from the dinoflagellate Pfiesteria piscicida
    • Zhang H, Hou Y, Lin S, (2006) Isolation and characterization of PCNA from the dinoflagellate Pfiesteria piscicida. J Eukaryot Microbiol 53: 142-150.
    • (2006) J Eukaryot Microbiol , vol.53 , pp. 142-150
    • Zhang, H.1    Hou, Y.2    Lin, S.3
  • 10
    • 23944440377 scopus 로고    scopus 로고
    • Symbiodinium (Pyrrhophyta) genome sizes (DNA content) are smallest among dinoflagellates
    • LaJeunesse TC, Lambert G, Andersen RA, Coffroth MA, Galbraith DW, (2005) Symbiodinium (Pyrrhophyta) genome sizes (DNA content) are smallest among dinoflagellates. J Phycol 41: 880-886.
    • (2005) J Phycol , vol.41 , pp. 880-886
    • LaJeunesse, T.C.1    Lambert, G.2    Andersen, R.A.3    Coffroth, M.A.4    Galbraith, D.W.5
  • 11
    • 0030841429 scopus 로고    scopus 로고
    • Cellular DNA content of marine phytoplankton using two new fluorochromes: taxonomic and ecological implications
    • Veldhuis MJW, Cucci TL, Sieracki ME, (1997) Cellular DNA content of marine phytoplankton using two new fluorochromes: taxonomic and ecological implications. J Phycol 33: 527-541.
    • (1997) J Phycol , vol.33 , pp. 527-541
    • Veldhuis, M.J.W.1    Cucci, T.L.2    Sieracki, M.E.3
  • 14
    • 51449120033 scopus 로고    scopus 로고
    • From Stop to Start: tandem genearrangement, copy number and trans-splicing sites in the dinoflagellate Amphidinium carterae
    • Bachvaroff TR, Place AR, (2008) From Stop to Start: tandem genearrangement, copy number and trans-splicing sites in the dinoflagellate Amphidinium carterae. PLoS ONE 3: e2929.
    • (2008) PLoS ONE , vol.3
    • Bachvaroff, T.R.1    Place, A.R.2
  • 15
    • 0031847478 scopus 로고    scopus 로고
    • Diversity and ecology of zooxanthellae on coral reefs, a review
    • Rowan R, (1998) Diversity and ecology of zooxanthellae on coral reefs, a review. J Phycol 34: 407-417.
    • (1998) J Phycol , vol.34 , pp. 407-417
    • Rowan, R.1
  • 16
    • 0033619914 scopus 로고    scopus 로고
    • Seasonal fluctuations in environmental factors and variations in symbiotic algae and chlorophyll pigments in four Indo-Pacific coral species
    • Brown BE, Dunne RP, Ambarasari I, Le Tissier MDA, Satapoomin U, (1999) Seasonal fluctuations in environmental factors and variations in symbiotic algae and chlorophyll pigments in four Indo-Pacific coral species. Mar Ecol Prog Ser 191: 53-69.
    • (1999) Mar Ecol Prog Ser , vol.191 , pp. 53-69
    • Brown, B.E.1    Dunne, R.P.2    Ambarasari, I.3    Le Tissier, M.D.A.4    Satapoomin, U.5
  • 17
    • 77953131723 scopus 로고    scopus 로고
    • A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai'i
    • Pochon X, Gates RD, (2010) A new Symbiodinium clade (Dinophyceae) from soritid foraminifera in Hawai'i. Mol Phylogenet Evol 56: 492-497.
    • (2010) Mol Phylogenet Evol , vol.56 , pp. 492-497
    • Pochon, X.1    Gates, R.D.2
  • 18
    • 0034761933 scopus 로고    scopus 로고
    • Investigating the biodiversity, ecology, and phylogeny of endosymbiotic dinoflagellates in the genus Symbiodinium using the ITS region: in search of a "species" level marker
    • LaJeunesse TC, (2001) Investigating the biodiversity, ecology, and phylogeny of endosymbiotic dinoflagellates in the genus Symbiodinium using the ITS region: in search of a "species" level marker. J Phycol 37: 866-80.
    • (2001) J Phycol , vol.37 , pp. 866-880
    • LaJeunesse, T.C.1
  • 19
    • 0038046352 scopus 로고    scopus 로고
    • Evolving lineages of Symbiodinium-like dinoflagellates based on ITS1 rDNA
    • Rodriguez-Lanetty M, (2003) Evolving lineages of Symbiodinium-like dinoflagellates based on ITS1 rDNA. Mol Phylogenet Evol 28: 152-168.
    • (2003) Mol Phylogenet Evol , vol.28 , pp. 152-168
    • Rodriguez-Lanetty, M.1
  • 20
    • 27944454486 scopus 로고    scopus 로고
    • Geographic distribution of zooxanthella groups in three coral species on the Great Barrier Reef sampled after the 2002 bleaching event
    • van Oppen MJH, Mahiny AJ, Done TJ, (2005) Geographic distribution of zooxanthella groups in three coral species on the Great Barrier Reef sampled after the 2002 bleaching event. Coral Reefs 24: 482-87.
    • (2005) Coral Reefs , vol.24 , pp. 482-487
    • van Oppen, M.J.H.1    Mahiny, A.J.2    Done, T.J.3
  • 21
    • 77956518397 scopus 로고    scopus 로고
    • Genetic divergence across habitats in the widespread coral Seriatopora hystrix and its associated Symbiodinium
    • Bongaerts P, Riginos C, Ridgway T, Sampayo EM, van Oppen MJH, et al. (2010) Genetic divergence across habitats in the widespread coral Seriatopora hystrix and its associated Symbiodinium. PLoS ONE 5: e10871.
    • (2010) PLoS ONE , vol.5
    • Bongaerts, P.1    Riginos, C.2    Ridgway, T.3    Sampayo, E.M.4    van Oppen, M.J.H.5
  • 22
    • 70349998968 scopus 로고    scopus 로고
    • Stability of coral-endosymbiont associations during and after a thermal stress event in the southern Great Barrier Reef
    • Stat M, Loh WKW, LaJeunesse TC, Hoegh-Guldberg O, Carter DA, (2009) Stability of coral-endosymbiont associations during and after a thermal stress event in the southern Great Barrier Reef. Coral Reefs 28: 709-713.
    • (2009) Coral Reefs , vol.28 , pp. 709-713
    • Stat, M.1    Loh, W.K.W.2    LaJeunesse, T.C.3    Hoegh-Guldberg, O.4    Carter, D.A.5
  • 23
    • 77956277261 scopus 로고    scopus 로고
    • Potential costs of acclimatization to a warmer climate: growth of a reef coral with heat tolerant vs. sensitive symbiont types
    • Jones A, Berkelmans R, (2010) Potential costs of acclimatization to a warmer climate: growth of a reef coral with heat tolerant vs. sensitive symbiont types. PLoS ONE 5: e10437.
    • (2010) PLoS ONE , vol.5
    • Jones, A.1    Berkelmans, R.2
  • 24
    • 72849113898 scopus 로고    scopus 로고
    • Outbreak and persistence of opportunistic symbiotic dinoflagellates during the 2005 Caribbean mass coral "bleaching" event
    • LaJeunesse TC, Finney JC, Smith R, Oxenford H, (2009) Outbreak and persistence of opportunistic symbiotic dinoflagellates during the 2005 Caribbean mass coral "bleaching" event. Proc Roy Soc Lond B 276: 4139-4148.
    • (2009) Proc Roy Soc Lond B , vol.276 , pp. 4139-4148
    • LaJeunesse, T.C.1    Finney, J.C.2    Smith, R.3    Oxenford, H.4
  • 25
    • 77956906680 scopus 로고    scopus 로고
    • Host-symbiont recombination vs. natural selection in the response of coral-dinoflagellate symbioses to environmental disturbance
    • LaJeunesse TC, Smith R, Walther M, Pinzón JH, Pettay T, et al. (2010) Host-symbiont recombination vs. natural selection in the response of coral-dinoflagellate symbioses to environmental disturbance. Proc Roy Soc Lond B 277: 2925-2934.
    • (2010) Proc Roy Soc Lond B , vol.277 , pp. 2925-2934
    • LaJeunesse, T.C.1    Smith, R.2    Walther, M.3    Pinzón, J.H.4    Pettay, T.5
  • 26
    • 59449091103 scopus 로고    scopus 로고
    • Understanding diversity in coral-algal symbiosis: a cluster-based approach to interpreting fine-scale genetic variation in the genus Symbiodinium
    • Correa A, Baker AC, (2009) Understanding diversity in coral-algal symbiosis: a cluster-based approach to interpreting fine-scale genetic variation in the genus Symbiodinium. Coral Reefs 28: 81-93.
    • (2009) Coral Reefs , vol.28 , pp. 81-93
    • Correa, A.1    Baker, A.C.2
  • 27
    • 79251581848 scopus 로고    scopus 로고
    • Variation in Symbiodinium ITS2 sequence assemblages among coral colonies
    • Stat M, Bird CE, Pochon X, Chasqui L, Chauka LJ, et al. (2011) Variation in Symbiodinium ITS2 sequence assemblages among coral colonies. PLoS ONE 6: e15854.
    • (2011) PLoS ONE , vol.6
    • Stat, M.1    Bird, C.E.2    Pochon, X.3    Chasqui, L.4    Chauka, L.J.5
  • 28
    • 0038480129 scopus 로고    scopus 로고
    • Comparison of phylogenies based on nuclear-encoded SSU rDNA and plastid-encoded psbA in the symbiotic dinoflagellate genus Symbiodinium
    • Takishita K, Ishikura M, Koike K, Maruyama T, (2003) Comparison of phylogenies based on nuclear-encoded SSU rDNA and plastid-encoded psbA in the symbiotic dinoflagellate genus Symbiodinium. Phycologia 42: 469-481.
    • (2003) Phycologia , vol.42 , pp. 469-481
    • Takishita, K.1    Ishikura, M.2    Koike, K.3    Maruyama, T.4
  • 29
    • 1342269557 scopus 로고    scopus 로고
    • Mitochondrial DNA phylogeny of the symbiotic dinoflagellates (Symbiodinium, Dinophyta)
    • Takabayashi M, Santos SR, Cook CB, (2004) Mitochondrial DNA phylogeny of the symbiotic dinoflagellates (Symbiodinium, Dinophyta). J Phycol 40: 160-164.
    • (2004) J Phycol , vol.40 , pp. 160-164
    • Takabayashi, M.1    Santos, S.R.2    Cook, C.B.3
  • 30
    • 17644371036 scopus 로고    scopus 로고
    • Phylogeny of dinoflagellates based on mitochondrial cytochrome b and nuclear small subunit rDNA sequence comparisons
    • Zhang H, Bhattacharya D, Lin S, (2005) Phylogeny of dinoflagellates based on mitochondrial cytochrome b and nuclear small subunit rDNA sequence comparisons. J Phycol 41: 411-420.
    • (2005) J Phycol , vol.41 , pp. 411-420
    • Zhang, H.1    Bhattacharya, D.2    Lin, S.3
  • 31
    • 58549118469 scopus 로고    scopus 로고
    • Cohesive molecular genetic data delineate species diversity in the dinoflagellate genus Symbiodinium
    • Sampayo EM, Dove S, Lajeunesse TC, (2009) Cohesive molecular genetic data delineate species diversity in the dinoflagellate genus Symbiodinium. Mol Ecol 18: 500-519.
    • (2009) Mol Ecol , vol.18 , pp. 500-519
    • Sampayo, E.M.1    Dove, S.2    Lajeunesse, T.C.3
  • 32
    • 0347356451 scopus 로고    scopus 로고
    • PCP gene family in Symbiodinium from Hippopus hippopus: low levels of concerted evolution, isoform diversity, and spectral tuning of chromophores
    • Reichman JR, (2003) PCP gene family in Symbiodinium from Hippopus hippopus: low levels of concerted evolution, isoform diversity, and spectral tuning of chromophores. Mol Biol Evol 20: 2143-2154.
    • (2003) Mol Biol Evol , vol.20 , pp. 2143-2154
    • Reichman, J.R.1
  • 33
    • 0242625274 scopus 로고    scopus 로고
    • An enigmatic GAPDH gene in the Symbiotic dinoflagellate genus and its related species (the order Suessiales): possible lateral gene transfer between two eukaryotic algae, dinoflagellate and euglenophyte
    • Takishita K, Ishida KI, Maruyama T, (2003) An enigmatic GAPDH gene in the Symbiotic dinoflagellate genus and its related species (the order Suessiales): possible lateral gene transfer between two eukaryotic algae, dinoflagellate and euglenophyte. Protist 154: 443-454.
    • (2003) Protist , vol.154 , pp. 443-454
    • Takishita, K.1    Ishida, K.I.2    Maruyama, T.3
  • 34
    • 33747497789 scopus 로고    scopus 로고
    • cDNA cloning and phylogenetic and expression analyses of actin in symbiotic dinoflagellates (Symbiodinium spp.)
    • Watanabe T, Kii S, Tanaka J, Takishita K, Maruyama T, (2006) cDNA cloning and phylogenetic and expression analyses of actin in symbiotic dinoflagellates (Symbiodinium spp.). J Appl Phycol 18: 219-225.
    • (2006) J Appl Phycol , vol.18 , pp. 219-225
    • Watanabe, T.1    Kii, S.2    Tanaka, J.3    Takishita, K.4    Maruyama, T.5
  • 35
    • 58949092029 scopus 로고    scopus 로고
    • Quantification of algal endosymbionts (Symbiodinium) in coral tissue using real-time PCR
    • Mieog J, van Oppen MJH, (2009) Quantification of algal endosymbionts (Symbiodinium) in coral tissue using real-time PCR. Mol Ecol Resour 9: 74-82.
    • (2009) Mol Ecol Resour , vol.9 , pp. 74-82
    • Mieog, J.1    van Oppen, M.J.H.2
  • 36
    • 14544306214 scopus 로고    scopus 로고
    • "Species" radiations of symbiotic dinoflagellates in the Atlantic and Indo-Pacific since the Miocene-Pliocene transition
    • LaJeunesse TC, (2005) "Species" radiations of symbiotic dinoflagellates in the Atlantic and Indo-Pacific since the Miocene-Pliocene transition. Mol Biol Evol 22: 570-581.
    • (2005) Mol Biol Evol , vol.22 , pp. 570-581
    • LaJeunesse, T.C.1
  • 37
    • 64549129565 scopus 로고    scopus 로고
    • Evolutionary analysis of orthologous cDNA sequences from cultured and symbiotic dinoflagellate symbionts of reef-building corals (Dinophyceae: Symbiodinium)
    • Voolstra CR, Sunagawa S, Schwarz JA, Coffroth MA, Yellowlees D, et al. (2008) Evolutionary analysis of orthologous cDNA sequences from cultured and symbiotic dinoflagellate symbionts of reef-building corals (Dinophyceae: Symbiodinium). Comp Biochem Physiol 4: 67-74.
    • (2008) Comp Biochem Physiol , vol.4 , pp. 67-74
    • Voolstra, C.R.1    Sunagawa, S.2    Schwarz, J.A.3    Coffroth, M.A.4    Yellowlees, D.5
  • 38
    • 34848880503 scopus 로고    scopus 로고
    • Analysis of an EST library from the dinoflagellate (Symbiodinium sp.) symbiont of reef-building corals
    • Leggat W, Hoegh-Guldberg O, Dove S, Yellowlees D, (2007) Analysis of an EST library from the dinoflagellate (Symbiodinium sp.) symbiont of reef-building corals. J Phycol 43: 1010-1021.
    • (2007) J Phycol , vol.43 , pp. 1010-1021
    • Leggat, W.1    Hoegh-Guldberg, O.2    Dove, S.3    Yellowlees, D.4
  • 39
    • 0345051044 scopus 로고    scopus 로고
    • Normalization and subtraction: two approaches to facilitate gene discovery
    • Bonaldo MF, Lennon G, Soares MB, (1996) Normalization and subtraction: two approaches to facilitate gene discovery. Genome Res 6: 791-806.
    • (1996) Genome Res , vol.6 , pp. 791-806
    • Bonaldo, M.F.1    Lennon, G.2    Soares, M.B.3
  • 40
    • 1942444640 scopus 로고    scopus 로고
    • Dinoflagellate expressed sequence tag data indicate massive transfer of chloroplast genes to the nuclear genome
    • Bachvaroff TR, (2004) Dinoflagellate expressed sequence tag data indicate massive transfer of chloroplast genes to the nuclear genome. Protist 155: 65-78.
    • (2004) Protist , vol.155 , pp. 65-78
    • Bachvaroff, T.R.1
  • 41
    • 4644285876 scopus 로고    scopus 로고
    • Expressed sequence tag analysis of the dinoflagellate Lingulodinium polyedrum during dark phase
    • Tanikawa N, Akimoto H, Ogoh K, Chun W, Ohmiya Y, (2004) Expressed sequence tag analysis of the dinoflagellate Lingulodinium polyedrum during dark phase. Photochem Photobiol 80: 31-35.
    • (2004) Photochem Photobiol , vol.80 , pp. 31-35
    • Tanikawa, N.1    Akimoto, H.2    Ogoh, K.3    Chun, W.4    Ohmiya, Y.5
  • 43
    • 17744363400 scopus 로고    scopus 로고
    • Gene expression in florida red tide dinoflagellate Karenia brevis: analysis of an expressed sequence tag library and development of dna microarray
    • Lidie KB, Ryan JC, Barbier M, Dolah FM, (2005) Gene expression in florida red tide dinoflagellate Karenia brevis: analysis of an expressed sequence tag library and development of dna microarray. Mar Biotech 7: 481-493.
    • (2005) Mar Biotech , vol.7 , pp. 481-493
    • Lidie, K.B.1    Ryan, J.C.2    Barbier, M.3    Dolah, F.M.4
  • 44
    • 33748763306 scopus 로고    scopus 로고
    • Monophyly of Rhizaria and multigene phylogeny of unicellular bikonts
    • Burki F, Pawlowski J, (2006) Monophyly of Rhizaria and multigene phylogeny of unicellular bikonts. Mol Biol Evol 23: 1922-1930.
    • (2006) Mol Biol Evol , vol.23 , pp. 1922-1930
    • Burki, F.1    Pawlowski, J.2
  • 45
    • 5044240973 scopus 로고    scopus 로고
    • Bellerophon: a program to detect chimeric sequences in multiple sequence alignments
    • Huber T, Faulkner G, Hugenholtz P, (2004) Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics 20: 2317-2319.
    • (2004) Bioinformatics , vol.20 , pp. 2317-2319
    • Huber, T.1    Faulkner, G.2    Hugenholtz, P.3
  • 46
    • 84855375289 scopus 로고    scopus 로고
    • GeoSymbio: A hybrid, cloud-based web application of global geospatial bioinformatics and ecoinformatics for Symbiodinium-host symbioses
    • In press (DOI: 10.1111/j.1755-0998.2011.03081.x)
    • Franklin EC, Stat M, Pochon X, Putnam HM, Gates RD, (2011) GeoSymbio: A hybrid, cloud-based web application of global geospatial bioinformatics and ecoinformatics for Symbiodinium-host symbioses. Mol Ecol Resour In press (DOI: 10.1111/j.1755-0998.2011.03081.x).
    • (2011) Mol Ecol Resour
    • Franklin, E.C.1    Stat, M.2    Pochon, X.3    Putnam, H.M.4    Gates, R.D.5
  • 47
    • 28844470439 scopus 로고    scopus 로고
    • Molecular phylogeny, evolutionary rates, and divergence timing of the symbiotic dinoflagellate genus Symbiodinium
    • Pochon X, Montoya-Burgos JI, Stadelmann B, Pawlowski J, (2006) Molecular phylogeny, evolutionary rates, and divergence timing of the symbiotic dinoflagellate genus Symbiodinium. Mol Phylogenet Evol 38: 20-30.
    • (2006) Mol Phylogenet Evol , vol.38 , pp. 20-30
    • Pochon, X.1    Montoya-Burgos, J.I.2    Stadelmann, B.3    Pawlowski, J.4
  • 48
    • 46949092431 scopus 로고    scopus 로고
    • Phylogenomics reveal a new "megagroup" including most photosynthetic eukaryotes
    • Burki F, Shalchian-Tabrizi K, Pawlowski J, (2008) Phylogenomics reveal a new "megagroup" including most photosynthetic eukaryotes. Biol Letters 4: 366-369.
    • (2008) Biol Letters , vol.4 , pp. 366-369
    • Burki, F.1    Shalchian-Tabrizi, K.2    Pawlowski, J.3
  • 49
    • 17744386162 scopus 로고    scopus 로고
    • Multigene analyses of bilaterian animals corroborate the monophyly of Ecdysozoa, Lophotrochozoa, and Protostomia
    • Philippe H, Lartillot N, Brinkmann H, (2005) Multigene analyses of bilaterian animals corroborate the monophyly of Ecdysozoa, Lophotrochozoa, and Protostomia. Mol Biol Evol 22: 1246-1253.
    • (2005) Mol Biol Evol , vol.22 , pp. 1246-1253
    • Philippe, H.1    Lartillot, N.2    Brinkmann, H.3
  • 51
    • 62849116357 scopus 로고    scopus 로고
    • Dinoflagellate mitochondrial genomes: stretching the rules of molecular biology
    • Waller RF, Jackson CJ, (2009) Dinoflagellate mitochondrial genomes: stretching the rules of molecular biology. BioEssays 31: 237-245.
    • (2009) BioEssays , vol.31 , pp. 237-245
    • Waller, R.F.1    Jackson, C.J.2
  • 53
    • 79959953825 scopus 로고    scopus 로고
    • Genomic understanding of dinoflagellates
    • Lin S, (2011) Genomic understanding of dinoflagellates. Res Microbiol 162: 551-569.
    • (2011) Res Microbiol , vol.162 , pp. 551-569
    • Lin, S.1
  • 54
    • 78149435700 scopus 로고    scopus 로고
    • Dinoflagellate phylogeny as inferred from heat shock protein 90 and ribosomal gene sequences
    • Hoppenrath M, Leander BS, (2010) Dinoflagellate phylogeny as inferred from heat shock protein 90 and ribosomal gene sequences. PLoS ONE 5: e13220.
    • (2010) PLoS ONE , vol.5
    • Hoppenrath, M.1    Leander, B.S.2
  • 55
    • 33645372560 scopus 로고    scopus 로고
    • Puzzles of the human genome: why do we need our introns?
    • Fedorova L, Fedorov A, (2005) Puzzles of the human genome: why do we need our introns? Curr Genomics 6: 589-595.
    • (2005) Curr Genomics , vol.6 , pp. 589-595
    • Fedorova, L.1    Fedorov, A.2
  • 56
    • 0032975398 scopus 로고    scopus 로고
    • Phylogenetic relationship of muscle tissues deduced from superimposition of gene trees
    • Oota S, Saitou N, (1999) Phylogenetic relationship of muscle tissues deduced from superimposition of gene trees. Mol Biol Evol 16: 856-867.
    • (1999) Mol Biol Evol , vol.16 , pp. 856-867
    • Oota, S.1    Saitou, N.2
  • 57
    • 28644433381 scopus 로고    scopus 로고
    • Sequence and comparative genomic analysis of actin-related proteins
    • Muller J, Oma Y, Vallar L, Friederich E, Poch O, et al. (2005) Sequence and comparative genomic analysis of actin-related proteins. Mol Biol Cell 16: 5736-5748.
    • (2005) Mol Biol Cell , vol.16 , pp. 5736-5748
    • Muller, J.1    Oma, Y.2    Vallar, L.3    Friederich, E.4    Poch, O.5
  • 58
    • 4143127619 scopus 로고    scopus 로고
    • Mechanisms underlying the evolution and maintenance of functionally heterogeneous 18S rRNA genes in apicomplexans
    • Rooney AP, (2004) Mechanisms underlying the evolution and maintenance of functionally heterogeneous 18S rRNA genes in apicomplexans. Mol Biol Evol 21: 1704-1711.
    • (2004) Mol Biol Evol , vol.21 , pp. 1704-1711
    • Rooney, A.P.1
  • 59
    • 0026600229 scopus 로고
    • Ribosomal RNA sequences and the diversity of symbiotic dinoflagellates (zooxanthellae)
    • Rowan R, Powers D, (1992) Ribosomal RNA sequences and the diversity of symbiotic dinoflagellates (zooxanthellae). Proc Natl Acad Sci USA 89: 3639-3643.
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 3639-3643
    • Rowan, R.1    Powers, D.2
  • 60
  • 61
    • 33344465325 scopus 로고    scopus 로고
    • High genetic diversity of the symbiotic dinoflagellates in the coral Pocillopora meandrina from the South Pacific
    • Magalon H, Baudry E, Huste A, Adjeroud M, Veuille M, (2006) High genetic diversity of the symbiotic dinoflagellates in the coral Pocillopora meandrina from the South Pacific. Mar Biol 148: 913-922.
    • (2006) Mar Biol , vol.148 , pp. 913-922
    • Magalon, H.1    Baudry, E.2    Huste, A.3    Adjeroud, M.4    Veuille, M.5
  • 62
    • 68049138036 scopus 로고    scopus 로고
    • Specificity in communities of Symbiodinium in corals from Johnston Atoll
    • Stat M, Pochon X, Cowie R, Gates RD, (2009) Specificity in communities of Symbiodinium in corals from Johnston Atoll. Mar Ecol Prog Ser 386: 83-96.
    • (2009) Mar Ecol Prog Ser , vol.386 , pp. 83-96
    • Stat, M.1    Pochon, X.2    Cowie, R.3    Gates, R.D.4
  • 63
    • 0028239826 scopus 로고
    • Evolution of cytochrome oxidase, an enzyme older than atmospheric oxygen
    • Castresana J, Lübben M, Saraste M, (1994) Evolution of cytochrome oxidase, an enzyme older than atmospheric oxygen. EMBO J 13: 2516-2525.
    • (1994) EMBO J , vol.13 , pp. 2516-2525
    • Castresana, J.1    Lübben, M.2    Saraste, M.3
  • 64
    • 34247570395 scopus 로고    scopus 로고
    • DNA barcoding and the renaissance of taxonomy
    • Miller SE, (2007) DNA barcoding and the renaissance of taxonomy. Proc Natl Acad Sci USA 104: 4775-4776.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 4775-4776
    • Miller, S.E.1
  • 65
    • 78649742492 scopus 로고    scopus 로고
    • Environmental barcoding reveals massive dinoflagellate diversity in marine environments
    • Stern RF, Horak A, Andrew RL, Coffroth MA, Andersen RA, et al. (2010) Environmental barcoding reveals massive dinoflagellate diversity in marine environments. PLoS ONE 5: e13991.
    • (2010) PLoS ONE , vol.5
    • Stern, R.F.1    Horak, A.2    Andrew, R.L.3    Coffroth, M.A.4    Andersen, R.A.5
  • 66
    • 0034256090 scopus 로고    scopus 로고
    • Calmodulin a prototypical calcium sensor
    • Chin D, Means AR, (2000) Calmodulin a prototypical calcium sensor. Trends Cell Biol 10: 322-8.
    • (2000) Trends Cell Biol , vol.10 , pp. 322-328
    • Chin, D.1    Means, A.R.2
  • 67
    • 0042208454 scopus 로고    scopus 로고
    • The mitotic DNA damage checkpoint proteins Rad17 and Rad24 are required for repair of double-strand breaks during meiosis in yeast
    • Shinohara M, Sakai K, Ogawa T, Shinohara A, (2003) The mitotic DNA damage checkpoint proteins Rad17 and Rad24 are required for repair of double-strand breaks during meiosis in yeast. Genetics 164: 855-865.
    • (2003) Genetics , vol.164 , pp. 855-865
    • Shinohara, M.1    Sakai, K.2    Ogawa, T.3    Shinohara, A.4
  • 68
    • 33847675333 scopus 로고    scopus 로고
    • Reconstitution of DNA segregation driven by assembly of a prokaryotic actin homolog
    • Garner EC, Campbell CS, Weibel DB, Mullins RD, (2007) Reconstitution of DNA segregation driven by assembly of a prokaryotic actin homolog. Science 315: 1270-1274.
    • (2007) Science , vol.315 , pp. 1270-1274
    • Garner, E.C.1    Campbell, C.S.2    Weibel, D.B.3    Mullins, R.D.4
  • 69
    • 0002051540 scopus 로고    scopus 로고
    • a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall TA: BioEdit
    • Hall TA: BioEdit (1999) a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41: 95-98.
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
  • 71
    • 37249090386 scopus 로고    scopus 로고
    • One-year survey of a single Micronesian reef reveals extraordinarily rich diversity of Symbiodinium types in soritid foraminifera
    • Pochon X, Garcia-Cuetos L, Baker AC, Castella E, Pawlowski J, (2007) One-year survey of a single Micronesian reef reveals extraordinarily rich diversity of Symbiodinium types in soritid foraminifera. Coral Reefs 26: 867-882.
    • (2007) Coral Reefs , vol.26 , pp. 867-882
    • Pochon, X.1    Garcia-Cuetos, L.2    Baker, A.C.3    Castella, E.4    Pawlowski, J.5
  • 72
    • 77954864594 scopus 로고    scopus 로고
    • Pelagodinium gen. nov. and P. béii comb. nov., a dinoflagellate symbiont of planktonic foraminifera
    • Siano R, Montresor M, Probert I, Not F, de Vargas C, (2010) Pelagodinium gen. nov. and P. béii comb. nov., a dinoflagellate symbiont of planktonic foraminifera. Protist 161: 385-399.
    • (2010) Protist , vol.161 , pp. 385-399
    • Siano, R.1    Montresor, M.2    Probert, I.3    Not, F.4    de Vargas, C.5
  • 73
    • 75149134423 scopus 로고    scopus 로고
    • Comparison of endosymbiotic and free-living Symbiodinium (Dinophyceae) diversity in a Hawaiian reef environment
    • Pochon X, Stat M, Takabayashi M, Chasqui L, Chauka LJ, et al. (2010) Comparison of endosymbiotic and free-living Symbiodinium (Dinophyceae) diversity in a Hawaiian reef environment. J Phycol 46: 53-65.
    • (2010) J Phycol , vol.46 , pp. 53-65
    • Pochon, X.1    Stat, M.2    Takabayashi, M.3    Chasqui, L.4    Chauka, L.J.5
  • 74
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S, (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 75
    • 13444259388 scopus 로고    scopus 로고
    • TREEFINDER a powerful graphical analysis environment for molecular phylogenetics
    • Jobb G, von Haeseler A, Strimmer K, (2004) TREEFINDER a powerful graphical analysis environment for molecular phylogenetics. BMC Evol Biol 4: 18.
    • (2004) BMC Evol Biol , vol.4 , pp. 18
    • Jobb, G.1    von Haeseler, A.2    Strimmer, K.3
  • 76
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: an approach using the bootstrap
    • Felsenstein J, (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 77
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: a program for the Bayesian inference of phylogeny
    • Huelsenbeck JP, Ronquist F, (2001) MrBayes: a program for the Bayesian inference of phylogeny. Bioinformatics 17: 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.